LOCUS       DAWKJW010000001        52818 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.001, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000001 DAWKJW010000000
VERSION     DAWKJW010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 52818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 52818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..52818
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.001"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            52..1005
                     /locus_tag="WJJ54_000001"
     CDS             52..1005
                     /locus_tag="WJJ54_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEZ7340930.1"
                     /translation="MTHTVHLHLEETDNLALQRLCGSFDNNLDLLAKALDIHISRRFE
                     HFTFNGAFAHAGKRALLKLLETAQTRDLNDGDIRLAAVEAQTEDAGHQEKNHDHAYYF
                     RTKRGSIGGRTPRQNGYIRALLNHDIVFGLGPAGTGKTYLAVAAAVDAMEKHQVERII
                     LVRPAVEAGEKLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVTKLIEKGLIEIAPLA
                     YMRGRTLNGAYIILDEAQNTTPEQMKMFLTRIGFGAKAVITGDTSQIDLPKNIKSGLK
                     DAREKLHGVEGLYFHTFTGEDVVRHPLVQKIVEAYESAEHD"
     gene            complement(1122..1445)
                     /locus_tag="WJJ54_000002"
     CDS             complement(1122..1445)
                     /locus_tag="WJJ54_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7340931.1"
                     /translation="MKKCILGILTACAAMPAFADRIGDLEARLAQLEHRVAVLESGSN
                     TVKIDLFGSNSTMYVCSVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCEDEAIR
                     CRKFD"
     gene            complement(1618..2979)
                     /locus_tag="WJJ54_000003"
     CDS             complement(1618..2979)
                     /locus_tag="WJJ54_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HEZ7340932.1"
                     /translation="MLKKWLNKMLPSGRSSKKAESKTVIPAERHNIRAEMLSFAAENV
                     IRRLKGAGFQAYVVGGAIRDLLLGIEPKDFDVATDATPEQVHKLFRRSRIIGRRFQIV
                     HVMNGAEIIEVTTFRGGAKVHQNAHGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKE
                     EILDFHNGIADVAARRLVMIGDAAERYQEDPVRILRAIRLSGKLGFELSEETTAPIAE
                     SICRLKHEPVARLFDEIMKLLFSGHARECLKRLNGFDIPDDIHPLLNALRVSDGIAGK
                     MTVLALKNTDERLRADKSVSVGFVLAALMWPELERHWKSNLQQGLKPAPALSDAINTM
                     RETVERGWGVPQRFSATMREIWMFQPQFENRKGARPHKLFAQARFRAAYDFLLLRAET
                     GNADRALAEWWTAFQTASTEQRSEMTKNEAAARHEKNEGQAKKRRRRRRKPKPKVVGT
                     DWE"
     gene            complement(3337..5037)
                     /gene="recJ"
                     /locus_tag="WJJ54_000004"
     CDS             complement(3337..5037)
                     /gene="recJ"
                     /locus_tag="WJJ54_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEZ7340933.1"
                     /translation="MSVKIQTRSVNTDVFNHLLTAGADPLIARLCASRGVQSPAELDD
                     KLASLLPYQTLTNCEAAAGRLADAVERKEKILIVADYDADGATACSVGMSGLAAMGAK
                     VDFLVPNRFEHGYGLTPELAEIAAEQGVDLLITVDNGIASIAGVARAQALGLDVIVTD
                     HHLPAETVPDCIIVNPNQKGCGFPSKSLAGVGVIFYVLMALRAELRRRNYFSDGIKEP
                     NLGELLDLVALGTVADVVPLDHNNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKA
                     QPFDMGFALGPRINAAGRLDDMSVGIACLLARDDAEAQELAAQLNNLNIERREIEQSM
                     LQDALNAFPETLPSGQTTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVR
                     GSGRSIPNLHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTAFEEAVRE
                     MVCEDDLSQTFITDGSLPACDITLEQAQNLARHVWGQGFAPPSFTDEFHVVRQQPLGA
                     EGKHKKVWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEWRNNLELQLYIDYWEAA
                     "
     gene            complement(5106..5822)
                     /locus_tag="WJJ54_000005"
     CDS             complement(5106..5822)
                     /locus_tag="WJJ54_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7340934.1"
                     /translation="MLFRKTTAAVLAAALMLNGCTAMMWGMNDPFSQTTAYKHVDKDQ
                     IRAFGVVAKDNAQLEKGSLVMMGGKYWFVVNPEDSAKLTGILKAGLDKPFQIVEDTPS
                     YARHQALPVKLESPGSQNFSTEGLCLRYDTDRPADIAKLKQLEFEAVELDNRTIYTRC
                     VSAKGKYYATPQKLNADYHFEQSVPVDIYYTVTEKHTDKSKLFGNILYTPPLLILDAA
                     GAVLALPAAALGAVVDAARK"
     gene            complement(5869..6375)
                     /locus_tag="WJJ54_000006"
     CDS             complement(5869..6375)
                     /locus_tag="WJJ54_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HEZ7340935.1"
                     /translation="MFEQEDEWVSKTQMKKQMNGLQDLGMELTKLSSDTLKKIGLDED
                     LYEAIVTYKKITSNGALKRQAQFIGRLMRDTDPAPIEAFLAKLRGDDAAHNAFLQRVE
                     RTRMELLADDGALTQFMSDFPNADAGKLRTLIRNTKKEQEQNKPPKNFRALFQELKTV
                     MENGDAEI"
     gene            6529..7860
                     /gene="pmbA"
                     /locus_tag="WJJ54_000007"
     CDS             6529..7860
                     /gene="pmbA"
                     /locus_tag="WJJ54_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HEZ7340936.1"
                     /translation="MLFNHTASELLDLCRRTLDLAKAAGATAAEADFSESIGQSVSVR
                     LGEIEQIEFQQDKSLDITVYVGKRKGRAGTADFSEQALRDTVRAAADIARHTAEDGCA
                     GLADACLMAKHIGDPDLYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGH
                     YQYVYGNTHGFAAHRQGTHHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQT
                     AAERTLRRLNSRSIPTGSYPVLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKK
                     VLPDFLNLREEPHIPRSFRSSYFDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQT
                     TGNAGGAHNLYLNHTHETQSDLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVEN
                     GVIAYPVHEITVAGRLQDMYRDIVGVADDALRRSSNKIGSILIAGMTVAGS"
     gene            complement(8157..8360)
                     /locus_tag="WJJ54_000008"
     CDS             complement(8157..8360)
                     /locus_tag="WJJ54_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEZ7340937.1"
                     /translation="MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKE
                     GQRVSFDVTTGPKGKQAANIQAA"
     gene            8603..8905
                     /gene="clpS"
                     /locus_tag="WJJ54_000009"
     CDS             8603..8905
                     /gene="clpS"
                     /locus_tag="WJJ54_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HEZ7340938.1"
                     /translation="MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEI
                     FMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI"
     gene            8907..11198
                     /gene="clpA"
                     /locus_tag="WJJ54_000010"
     CDS             8907..11198
                     /gene="clpA"
                     /locus_tag="WJJ54_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HEZ7340939.1"
                     /translation="MLAPELEQILQQLYREARKAHYEFISLEHLLLVLIEEDASVPNV
                     LKLCGADLKVVSEQLAASVAENTPLIPEHLLDTVETRPTLGFQRVMQRAMVHTQSAGK
                     AAVEPLDVLVALMSETDSHTVYFLKLQSVTRFEVLRCIAHGSPDEDEDDGNYSSDGMD
                     DDNENRTKPGKNPLSAYTVNLNAEVKAGRIDPLIGRKHEMERLVQILCRRRKNNPLLV
                     GEAGVGKTALAEGLAHQIVNGGIPDALKDAEVYALDMGSLLAGTKYRGDFEARVKSVL
                     KQLEKIPHAILFIDEIHTIIGAGSTSGGTMDASNLLKPALAKGSLRCIGATTYDEYRT
                     IFDKDHALSRRFQKIDVVEPTVSETVQILRGLKPMFEAFHQVRYTQGALEAAAELSAR
                     YINERFLPDKAIDVMDEAGAAQRILPKSKQKKVIGKAQIETVIAKVARIPEKTVSHDD
                     KQVLQFLDRDLKNMVYGQENAIDALVTAVKMSRSGLALPDKPIGSFLFSGPTGVGKTE
                     AAKQLAYSMDVPLQRFDMSEYMERHAVSRLIGAPPGYVGFEQGGLLTEAVNKQPHCVL
                     LLDEIEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNVILIMTTNAGAESLSRPGLGF
                     TAKREHGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPIIVKVVDKFLLQLEHQLLDKK
                     VEAEFTPALRKYLAEKGFDPQMGARPMHRLIQEKIRKPLADELLFGKLADGGFVRIDW
                     DAAKEEAVLKFKKNKVKPEAEPV"
     gene            complement(11245..14343)
                     /locus_tag="WJJ54_000011"
     CDS             complement(11245..14343)
                     /locus_tag="WJJ54_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HEZ7340940.1"
                     /translation="MNLETKPIAETPNFIVLDQYEKIEQSGSYQSENQLEAELVADLQ
                     NQGYEYRKDLNSQSRLLENLRAQLQRLNDVAFSDGEWARFLTEYLDRSSEKITDKTRK
                     IHDDHIYDFAFDDGRLKNIYLLDKKNLARNHVQLINQFEQTGTHANRYDVTVLVNGLP
                     LVQIELKKRGVAVREAFNQVHRYSKESFNSENSLFKFLQIFVISNGTDTRYFANTTKR
                     DKNSFDFTMNWARSDNHPIKDLKDFTATFLQKSVLLSVLLHYSVFDANDTLLIMRPYQ
                     IAAAERILWKINSSAQAKNWSGPESGGYVWHTTGSGKTLTSFKAARLATESAFIDKVF
                     FVVDRKDLDYQTMKEYQRFSPDSVNGSESTAGLKRNLEKDDNKIIVTTIQKLNNLMKG
                     EDNLLVYHQRVVFIFDECHRSQFGEAQKNLKKKFKKFCQFGFTGTPIFPENALGAETT
                     AGVFGRELHSYVITDAIRDEKVLKFKVDYNDVRPQFKAVEAEQDEKKLSAAENRQALL
                     HPERIREITQYILNQFRQKTHRLNAGGKGFNAMFAVSSVDAAKCYYEAFKTQQAGSLH
                     PLKVATIFSFAANEEQNAVGEIVDETFEPEAMDSSAKEFLQAAINDYNACFKTNFGTD
                     SKAFQNYYRDLAKRVKNQEVDLLIVVGMFLTGFDAPTLNTLFVDKNLRYHGLMQAFSR
                     TNRIYDATKTFGNIVCFRDLEQATIDAITLFGDKHTKNVVLEKSYEEYMNGYTDSQTG
                     EARRGYLDVAKELRERFPEPDEIETEKDKKDFAKLFGEYLRAENVLQNYDEFAALREL
                     QSVDAADEDAMKAFQEKYYLSDEDVQEMRQVPMPSERAVQDYRSAYNDIRDWLRRQKA
                     GEQKEQSKIDWDDVVFEVDLLKSQEINLDYILQLVFEHHKKIKGKAELVEEIRRIIRA
                     SIGHRAKEGLIVDFINDTDLDKVPDVPAILETFYTYAQEVMRHEAAGLIAAEGLNEIA
                     AKRYLTGSLKRGYASENGTELTETLPKMSPLNPQYLTKKQSVFQKIAAFVEKFAGIGT
                     DI"
     gene            complement(14773..15345)
                     /locus_tag="WJJ54_000012"
     CDS             complement(14773..15345)
                     /locus_tag="WJJ54_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEZ7340941.1"
                     /translation="MGEVFDLKNGYTPSKSNKEYWENGSIPWFRMEDIRENGRILDNS
                     LQHISKSAVKGGKLFPANSIIMATSATIGEHALITVPFLANQRFTSLSLKPEFADKLS
                     IYFLYYYCFNLSEWCKKNTTTSSFASVDMNGFKRFPIPIPPLPEQEKIVAILDKFDTL
                     THSISEGLPHEIALRRKQYEYYREQLLAFR"
     gene            complement(15386..15982)
                     /locus_tag="WJJ54_000013"
     CDS             complement(15386..15982)
                     /locus_tag="WJJ54_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEZ7340942.1"
                     /translation="MDMQSKAKKLIEMIQTAPVEWKPLGGENGIAIIKTGQAVSKQKI
                     SNNIGSYPVINSGKEPLGYIDEWNTENDPIGITTRGAGVGSITWQEGRYFRGNLNYAV
                     TIKNRTELDVRFLYHILLEFEQEIHALCTFTGIPALNASNLKKLLIPIPPLETQQKIV
                     KILDKFTELEAELALRKRQYRYYRDFLLDFDNQIGGDS"
     gene            complement(16148..17158)
                     /locus_tag="WJJ54_000014"
     CDS             complement(16148..17158)
                     /locus_tag="WJJ54_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HEZ7340943.1"
                     /translation="MSIILYTANDGTAQFALQEFGGQLWLTQADMAELYQTTKQNISK
                     HIKTILAEQELEEKATVNFQLTVQNENGRKVNRKIAHYSLPMIIAVGYRVRSARGIQF
                     RQWATERLDEYLTKGFAIDDERLKGTGGGDYWKELLNRIRDIRSSEKALYRQVLDLYA
                     TSQDYNPKSSESQTFFAAVQNKLHYAASRQTAAELIYSRADSSKDFMGLTTFQGAIPT
                     LNEAKIAKNYLTEDELFRLNRLVSAFFDLAEIKAQEQSPMYMRDWIAELDKFSGLYGQ
                     GTLQGAGSISRKQAEQKAEREYRAYEARILSPVEQAYLESVKALEKTAVQQIKQKKDR
                     TK"
     gene            complement(17155..18705)
                     /locus_tag="WJJ54_000015"
     CDS             complement(17155..18705)
                     /locus_tag="WJJ54_000015"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HEZ7340944.1"
                     /translation="MMTEMQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFI
                     SENFTDYMQAGDSSIDYAAMPDSIITPEIKDDAVKVKGYFIYPGQLFCNIAAEAHQNE
                     ELNTKLKEIFTAIESSASGYPSEQDIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGV
                     AELDFGSFEDHHIDLFGDAYEYLISNYAANAGKSGGEFFTPQSVSVSKLIARLAVHGQ
                     EKVNKIYDPACGSGSLLLQAKKQFDEHIIEEGFFGQEINHTTYNLARMNMFLHNVNYN
                     KFHIELGDTLTNPKLKDSKPFDAVVSNPPYSINWIGSGDPTLINDDRFAPAGVLAPKS
                     KADFAFILHALNYLSGRGRAAIVSFPGIFYRGGAEQKIRQYLVEGNYVETVIALAPNL
                     FYGTGIAVNILVLSKHKDNTDIQFIDAGGFFKKETNNNVLTEEHIAEIVKLFADKADV
                     PHIAQNAAQQTVKDNGYNLAVSSYVEPEDTREIIDIKQLNAEISETVAKIERLRREID
                     EVIAEIEA"
     gene            complement(18778..19782)
                     /gene="rfaD"
                     /locus_tag="WJJ54_000016"
     CDS             complement(18778..19782)
                     /gene="rfaD"
                     /locus_tag="WJJ54_000016"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HEZ7340945.1"
                     /translation="MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLSKGEKFKNLA
                     ECEIAHYLDKHEFIRQVREHILPYQNIEAVFHQGACSDTMNHDGLYMMENNYQYTLDL
                     LDWCQDERIPFLYASSAAVYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGL
                     TAQVVGFRYFNVYGQHEQHKGRMASVAFHHFHQYREHGYVNLFGSNDGYGNGEQTRDF
                     VSVEDVAKVNLYFFDHPELSGIYNLGTGRSQQFNELAAATVNACRAAEGKPEMSLKEL
                     VEEEFIRYIPFPDALKGKYQSFTQADITKLREAGYKEEFFDVKSGVDRYVKWMLENLA
                     "
     gene            complement(19911..20942)
                     /locus_tag="WJJ54_000017"
     CDS             complement(19911..20942)
                     /locus_tag="WJJ54_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ7340946.1"
                     /translation="MPDFQRITIENIEYFIVDSIQNLRAEDSFIHRNNKLSVFGGNGE
                     ARKYVGSYIDDSGRKLSTFFEYENWGITETKNGRRVEYPFIQKNCFFNKKNLQRYLVD
                     AKVEYHKQEQKYHHDISRFYDDYVLSINNLPTENIFFSIHDVSDHLENSKGYRRGYIR
                     SEDDIWSIWRKIVLPKISYLSILKLLPVKDIEDSEPLFYFRIFLDYQFRSIVHPQLLS
                     REKLEIPASEFNQFVEQEIIKQKSRKGQQKYRKDVINHMSQCPFTLITDEILLRASHI
                     KPYMVCITEKNEKEALDYLNGLALTPTYDWLFDQGYITFLDDGRLICGTRLSRYTWEK
                     LNINPNAKN"
     gene            complement(20944..22179)
                     /gene="dcm"
                     /locus_tag="WJJ54_000018"
     CDS             complement(20944..22179)
                     /gene="dcm"
                     /locus_tag="WJJ54_000018"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ7340947.1"
                     /translation="MTISTMAQTHDTRLQKTLLFPSQQGWKSKTFLKPDSHIRLATVF
                     SGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDITQFDARKFRN
                     QVDILVGGSPCQAFSMVGKRAGLEDTRGTLFYEFARVVDEVQPKIFIYENVKGLLNHD
                     NGKTWKVVKSVFYSLGYDLYFQIMNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIE
                     LEHTMQDFLEDYTDSKYFLREKGVKFVTSSKNRQKRYTQINGEIALCQKANQQFNWHG
                     DFIFQAARESEFDDFIFDVNNVEEKYYLSEKIKNYVLAGGTKNFKTSTETDLPVARPL
                     LQTMHKMHRAGVDNYVTHNRGRIRKLTPRECLRLMGFRDDFKILVSDTQMYRQAGNSI
                     VVDVLIAILKQMDITLYGE"
     gene            complement(22216..23187)
                     /gene="hldA"
                     /locus_tag="WJJ54_000019"
     CDS             complement(22216..23187)
                     /gene="hldA"
                     /locus_tag="WJJ54_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose synthase"
                     /protein_id="HEZ7340948.1"
                     /translation="MSAKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPV
                     PVAKIGRIDQRAGGAANVARNIASLGGRAGLLSVTGNDEAADALDALMVQDGVASYLM
                     RDKQIATTVKLRVVARNQQLIRLDFEEHPNCEVLEQIKQKYREILPEYDAIIFSDYGK
                     GGLSHISDMIDWAKHAGKTVLIDPKGDDYEKYVGATLITPNRAELKEVVGSWKNESEL
                     TEKAQNLRRHLDLTAVLLTRSEEGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGMG
                     LGLAAGCTMPEAMYLANTAAGVVVAKLGTAVCSFAELIKALSGQSTM"
     gene            complement(23242..23982)
                     /gene="pyrF"
                     /locus_tag="WJJ54_000020"
     CDS             complement(23242..23982)
                     /gene="pyrF"
                     /locus_tag="WJJ54_000020"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEZ7340949.1"
                     /translation="MNPLISDFQTPQQRTPVIVALDFANEKDTLGFVRNLDPTLCQIK
                     IGKELFTATGRNLAESLINQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASG
                     GRRMMEAAAEAVAGYGTKPLLIGVTVLTSMEQSDLAEIGLNTAPEEQVIRLAKLAQSS
                     GLDGVVCSAQEAAPLRRELGQDFVLVTPGIRLDVADNNDDQRRIMTPAEALAAGSTYL
                     VMGRPVTQAADPVAVLREVNRVANLEAN"
     gene            complement(24508..25155)
                     /gene="adk"
                     /locus_tag="WJJ54_000021"
     CDS             complement(24508..25155)
                     /gene="adk"
                     /locus_tag="WJJ54_000021"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEZ7340950.1"
                     /translation="MKALLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTP
                     LGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVD
                     LDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDK
                     EETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQPVEAVKAEVLGALGK"
     gene            25370..26209
                     /gene="htpX"
                     /locus_tag="WJJ54_000022"
     CDS             25370..26209
                     /gene="htpX"
                     /locus_tag="WJJ54_000022"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HEZ7340951.1"
                     /translation="MKRIFLFLATNIAVLVVINIVLAVLGINSRGGTGSLLAYSAVVG
                     FTGSIISLLMSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHS
                     PEPNAFATGASRNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVV
                     NTFVVFLSRIIANLIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRA
                     DAGAAKLVGAPKMISALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARL
                     KSL"
     gene            complement(26603..27901)
                     /locus_tag="WJJ54_000023"
     CDS             complement(26603..27901)
                     /locus_tag="WJJ54_000023"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEZ7340952.1"
                     /translation="MAKNVVVIGAQWGDEGKGKIVDWLAEEAGGVVRFQGGHNAGHTL
                     VVGGKKTILRLIPSGILHESLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIA
                     PTCPLILPYHIALDQAREASRGKGKIGTTGRGIGPAYEDKVARRAIRVADLLHPEKLR
                     EKLDVVLAYYNVQLQHLHNAEPVKAEDVMAVIEKVAPRIAPMITDVSRVLNEKNKNGE
                     KLLFEGAQGALLDIDYGTYPFVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVG
                     SGPFPTELFDEVGAGLAERGHEFGSVTGRARRCGWFDAAALKRSIQINGISGMCITKL
                     DVMDGVETINICVGYELPDGGKTDILPCGSDAVEACKPIYETMPGWSESTFGVKSYDA
                     LPANAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPFA"
     gene            complement(28005..29156)
                     /locus_tag="WJJ54_000024"
     CDS             complement(28005..29156)
                     /locus_tag="WJJ54_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEZ7340953.1"
                     /translation="MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPL
                     MEYAHSLLTHIDAGLSLKTILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRL
                     CYAGPVLHAQSDGLLNMREPLQAGAEMYGFADIRGDIELIDLMLKSMKIADMGKVLLS
                     LGHIGIFRALSDAAHLDAGQSATLLALMQDKDTGAVEAQVKAWKLDGMWAKAFSLLPR
                     LYGGREVLSDARGRLPDLSAVGGALDELQAVCDAFPDCEIHIDLSELRVDNYHTGLLY
                     AAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPAIERQPAVLVDAE
                     DAEAAHEAVEALREQGQCVVIDYGIGHNVSEELAGRLKKTDGVWQVVKR"
     gene            29491..30870
                     /gene="norM"
                     /locus_tag="WJJ54_000025"
     CDS             29491..30870
                     /gene="norM"
                     /locus_tag="WJJ54_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter NorM"
                     /protein_id="HEZ7340954.1"
                     /translation="MLLDLNRFSFPVFLKEIRLLTALALPMLLAQVAQVGIGFVDTVM
                     AGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTGEVGETGRQGIW
                     FGLILGIFGMVLMWATITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYA
                     SSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGLATMAVFWFSALALW
                     IYIAKENFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFG
                     EDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVLGWML
                     AVITVLSLVLFRSPLVSMYNNDPAVLSIAATVLLFAGLFQPADFTQCIASYALRGYKV
                     TKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAIALVWCLELCSR
                     EMVRSHKAV"
     gene            31049..32089
                     /gene="murB"
                     /locus_tag="WJJ54_000026"
     CDS             31049..32089
                     /gene="murB"
                     /locus_tag="WJJ54_000026"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEZ7340955.1"
                     /translation="MQPIRYRTDLTPYNTFGLRAQARAFIALEHADGLRDIVRLPEFN
                     RDTVLWLGGGSNILLMEDYAGLVVHMENKGIREIARSDGMVLIEAQAGEIWHDFVLHA
                     VALGLNGLENLSLIPGTVGASPVQNIGAYGVEAKDVIHSVRCFDLDTEAFVELANADC
                     RFAYRESLFKQEGKGRYVIVSVVFALKEHFVPNLGYGDLAAAVAERCAGREITAKEVS
                     DAVCAVRRRKLPDPGILGNVGSFFKNPVVGAGKAAALLQQHPDMPHYPQPDGSVKLAA
                     GWLIDQCRLKGFQIGGAAVHDKQALVLVNKNNASANDVRQLAQHIKFTVFAQFQVELH
                     AEPNWLPASFSL"
     gene            32101..32751
                     /locus_tag="WJJ54_000027"
     CDS             32101..32751
                     /locus_tag="WJJ54_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEZ7340956.1"
                     /translation="MPVTRPAKINTYTRIIDASLALFNEEGERNISTNHIAAHLGISP
                     GNLYYHFRNKDEIIVQLFKRYSEALLAYLNEAVLPSDVEDSINYMAGIYDVMWEYRFL
                     FSDVNTLLARSAELLGEHNTFTQAKVSPLLVNLLTQLNGLNIIQADQTAMNDLAVNMW
                     MVTKYWFDFDSSLRGRTKLTEDSKARGIRRTLSLLRPYLLPEHRKKYDRKIGNGNP"
     gene            32806..33594
                     /locus_tag="WJJ54_000028"
     CDS             32806..33594
                     /locus_tag="WJJ54_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ7340957.1"
                     /translation="MRAVPPPHISITGLGYLGLPLAQKFYQHGSRVAAIKRSLTSDDI
                     NLPIHLDTIDLNQDSAFQSANLARDTSFWRHHANKPVWFCLLPPSSLTHYADTVKQWA
                     ELARACNVQHLIFTSSTSVYGDTARECDEIALPDPQTESARQILAAEQHLLDSGVPNI
                     DILRLGGLYCAERHPVSRLVQKQNIPGGNRPINIVHRNIAVESLFQTAFKPGGRRLKN
                     IIEPRHPTRREFYTEEAAKLGLPAPDFAPDDSMGKIIRTVCDNS"
     gene            33654..34220
                     /locus_tag="WJJ54_000029"
     CDS             33654..34220
                     /locus_tag="WJJ54_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HEZ7340958.1"
                     /translation="MSALLPIINRLILQSPDSRSELATFAGKTLTLNIAGLKLAGRIT
                     EDGLLSAGNGFADTEITFRNSAVQKILQGGEPGAGDIGLEGDLILGIAVLSLLGSLRS
                     RASDELARIFGTQADIGSRAADIGHGIKQIGRNIAEQIGGFSRESESANIGNEALADC
                     LDEISRLRDGVERLNERLDRLERDIWID"
     gene            34240..35130
                     /locus_tag="WJJ54_000030"
     CDS             34240..35130
                     /locus_tag="WJJ54_000030"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HEZ7340959.1"
                     /translation="MNSPFHNIGIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGI
                     KEGCIYTQDTVGCHIVNKTELGQYCDLVAVLGGDGTFLSVAREIAPRAVPIIGINQGH
                     LGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIREGKTAERAIALNDAVLSRGG
                     AGQMIEFEVFVNREFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP
                     QSMTNRPIAIPDTSEIEILVTQGGDARVHFDGQTHIDVQNLDRITIRRYRNPLRILHP
                     TDYQYFKTLRQKLHWGEQLV"
     gene            35155..35913
                     /locus_tag="WJJ54_000031"
     CDS             35155..35913
                     /locus_tag="WJJ54_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEZ7340960.1"
                     /translation="MNPKTPPDHTEDAVRLSKRMAQLGLCSRREADGYIEQGWVTVNG
                     KTAVLGQKVSPADRIELNKKAHEQQAARITILLNKPVGYVSAQAEKGYKSAAELITPE
                     NRWEGDTGRIRFDPKHKIGLAPAGRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYL
                     VRVRGKLDEKGLALLNHGLSLDGEKLRPAQVEWQNEDQLRFVLKQGKKRQIRRMCELV
                     GLRVVGLKRIRMGKVKLGRLPPGKWRYLAPGESF"
     gene            complement(35968..36633)
                     /locus_tag="WJJ54_000032"
     CDS             complement(35968..36633)
                     /locus_tag="WJJ54_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ7340961.1"
                     /translation="MAVLSKEQVLSAFKNRKSCRHYDVARKISAEDFQFILELGRLSP
                     SSVGSEPWQFVVVQNPEIRQAIKPFSWGMADALDTASHLVVFLAKKNARFDSPFMLES
                     LKRRGVTEPDAMAKSLARYQAFQADDIKILDDSRALFDWCCRQTYIALGNMMTGAAMA
                     GIDSCPVEGFNYADMERVLSGQFGLFDAAEWGVSVAATFGYRVQEIATKARRPLEETV
                     IWA"
     gene            complement(36812..37708)
                     /locus_tag="WJJ54_000033"
     CDS             complement(36812..37708)
                     /locus_tag="WJJ54_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE2"
                     /protein_id="HEZ7340962.1"
                     /translation="MQLLKASDIISHLQIDGIFPGGNAIPCTHLNNYMNIKEKQLMNT
                     IADVQSSRDLRNLPINQVGIKDLRFPITLQTAEGIQSTVARLTMTVYLPAEQKGTHMS
                     RFVALMEQHAEALDFAQLHRLTAEMVALLDSRAGKISVSFPFFRKKTAPVSGIRSLLD
                     YDVCLTGEIKDGAYGYSMKVMIPVTSLCPCSKEISQYGAHNQRSHVTVSLTADAEVGI
                     EEVIDYVEAQASCQLYGLLKRPDEKYVTEKAYENPKFVEDMVRDVATSLIADKRIKSF
                     VVESENFESIHNHSAYAYIAYP"
     gene            37777..38934
                     /locus_tag="WJJ54_000034"
     CDS             37777..38934
                     /locus_tag="WJJ54_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEZ7340963.1"
                     /translation="MKFATKAIHSSYDCDEHNRALMPPIYQNSMFALHEIGENVPYRY
                     SRLSNPTRQILEDTVADLEHGAAGFAFSSGMAGIDAVWRTFLRPGDTIVAVADIYGGA
                     YDLLVDVYQKWGVNVVFADLGNPDNLDELLKAHKVKLVWLETPSNPLLRLVDIKVLAA
                     KAKAAGALVGIDNTFATPYLQQPLDMGCDFVFHSATKYLCGHSDVLMGIVVAKTKELA
                     QPLHDMMVHTGAVAGPLDCWLVLRGIKTLALRMNAHCQNALEIARRLEAHPAIEKVFH
                     PGLPSHEHYELAKTQMPKGIGGVVTVYLKNDTREAANSVIKNMKLVKMASSLGGVESL
                     VNHCYSQSHSGVPHDVKMEMGIKVGLLRFSIGIEDADDIWNDISAALDTTL"
     gene            complement(38997..39998)
                     /gene="hemB"
                     /locus_tag="WJJ54_000035"
     CDS             complement(38997..39998)
                     /gene="hemB"
                     /locus_tag="WJJ54_000035"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEZ7340964.1"
                     /translation="MQFPYRNVPASRMRRMRRDDFSRRLMREHTLTADDLIYPVFVLE
                     GSAREEDVPSMPGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTERAEEAYNPE
                     GLVPAAVRALRERFPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALC
                     HAEAGAQVVAPSDMMDGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSS
                     GNLGKADKKTYQMDPANTDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVP
                     TYAYQVSGEYAMLQAAIANGWLDGGKVVLESLLAFKRAGADGILTYYAIEAAKMLKR"
     gene            complement(40181..40465)
                     /gene="yhbY"
                     /locus_tag="WJJ54_000036"
     CDS             complement(40181..40465)
                     /gene="yhbY"
                     /locus_tag="WJJ54_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HEZ7340965.1"
                     /translation="MTDTKLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAAL
                     TAHELIKVRVFGDDRAERIEICTALCEAVDAQPVQHIGKLLVLWRKNIEG"
     gene            40575..41195
                     /locus_tag="WJJ54_000037"
     CDS             40575..41195
                     /locus_tag="WJJ54_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEZ7340966.1"
                     /translation="MAVRSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKD
                     KLIKPGTVLADLGSAPGSWSQVAAKLTGTSGAVFALDILPMEAIGGVSFIQGDFREND
                     VLAQFETLLDNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFL
                     VKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIYLLGKNKR"
     gene            41259..43226
                     /gene="ftsH"
                     /locus_tag="WJJ54_000038"
     CDS             41259..43226
                     /gene="ftsH"
                     /locus_tag="WJJ54_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEZ7340967.1"
                     /translation="MGNTFKSILVWVALGIGLMAAFNALDGKKEDNGQIEYSQFIQQV
                     NNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNAPLDDNLIKTLLDKNVRVKVTPEEK
                     PSALAALFYSLLPVLLLIGAWFYFMRMQTGGGGKGGAFSFGKSRARLLDKDANKVTFA
                     DVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAG
                     VPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGN
                     DEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRG
                     REQILNVHSKKVPLDKSVDLLSLARGTPGFSGADLANLVNEAALFAGRRNKVKVDQSD
                     FEDAKDKIYMGPERRSMVMHEDEKRATAYHESGHAIVAESLPFTDPVHKVTIMPRGRA
                     LGLTWQLPERDRISMYKDQMLSQLSILFGGRIAEDIFVGRISTGASNDFERATQMARE
                     MVTRYGMSDKMGVMVYAENEGEVFLGRSVTRSQNISEKTQQDIDAEIRRILDEQYQVA
                     YKILDENRDKMETMCKALMEWETIDRDQVLEIMAGKQPSPPKDYSHNLRENADAAEDN
                     APHAPTREETEAPAPADTASTESEQQPENKA"
     gene            43447..43878
                     /locus_tag="WJJ54_000039"
     CDS             43447..43878
                     /locus_tag="WJJ54_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HEZ7340968.1"
                     /translation="MKKVEKNILVLHGADKMFELVDKVEDYPHFLPWYSKTEVIGRSG
                     NELKARLFMDYMHVRQSFATHNRNIPGREIRMELLEGPFKTLRGTWKFIDLGDDMCKI
                     EFNLEYDFSNAVLSALISPVFNHLSATLVEAFVKEADRRYA"
     gene            43871..44149
                     /locus_tag="WJJ54_000040"
     CDS             43871..44149
                     /locus_tag="WJJ54_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HEZ7340969.1"
                     /translation="MLEIEIVYGLPDRQVLKTMQLAEGTTVRAAALQSGLDGIFEDLN
                     LHSAPLGIFGKAVKDDTPLRDGDRIEVYRPLLIDPKEARRKRVQNQEE"
     gene            44202..44780
                     /gene="pth"
                     /locus_tag="WJJ54_000041"
     CDS             44202..44780
                     /gene="pth"
                     /locus_tag="WJJ54_000041"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEZ7340970.1"
                     /translation="MSNKIKMLVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE
                     KKFFGEVARAALPDGDVWLLKPTTFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPC
                     GRIKFKLGGGNGGHNGLKDIQAKLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSTEHR
                     RQIDDAVAKSLQAIPDILAGKWEEATRFLHSK"
     gene            44841..45047
                     /locus_tag="WJJ54_000042"
     CDS             44841..45047
                     /locus_tag="WJJ54_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HEZ7340971.1"
                     /translation="MTELKQLIQTESIPVIEETLDFLLYECSIDDAPSAEEVAQWRDI
                     LAARGGKFLRLSKICQTWLDEEAA"
     gene            45044..45406
                     /locus_tag="WJJ54_000043"
     CDS             45044..45406
                     /locus_tag="WJJ54_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEZ7340972.1"
                     /translation="MKLPRNRFSLLSALWFAGGIYSLLFKAAETAPPPFPHFDKVAHL
                     ALFFAQIWLLTKAFRTDNRPIPYRSLMVFALCFAVVSECAQEWLTETRTGSLGDIFAD
                     LTGALLALFAARSADRPD"
     gene            45637..47052
                     /locus_tag="WJJ54_000044"
     CDS             45637..47052
                     /locus_tag="WJJ54_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13/DASS family transporter"
                     /protein_id="HEZ7340973.1"
                     /translation="MNLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIY
                     HILPYSPDANKGIALLIFVAALWFTEAVHITVTALMIPILAVVLGFPDMDIKKAMADF
                     SNPIIYIFFGGFALATALHMQRLDRKIAVSLLRLSRGNMKVAVLMLFLVTAFLSMWIS
                     NTATAAMMLPLAMGMLSHLDREKERKTYVFVLLGIAYCASIGGLGTLVGSPPNLIAAK
                     ALNLDFVGWMKLGLPMMLLILPLMLLSLYVILKPNLNERVEIKAESIPWTLHRVIALL
                     IFLATAAAWIFSSKIKTAFGISNPDTVIALSAAVAVVVFGVAQWKEVARNTDWGVLML
                     FGGGISLSTLLKTSGASEALGQQVAATFSGAPAFLVILIVAAFIIFLTEFTSNTASAA
                     LLVPIFSGIAMQMGLPEQVLVFVIGIGASCAFMLPVATPPNAIVFGTGLIKQREMMNV
                     GILLNILCVVLVALWAYAVLM"
     gene            47171..47680
                     /locus_tag="WJJ54_000045"
     CDS             47171..47680
                     /locus_tag="WJJ54_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ7340974.1"
                     /translation="MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRV
                     IKGFMIQGGGMDENMNEKETRDPIQNEASNGLPNDKYTIAMARTSDPHSASAQFFINT
                     ADNAFLNFRSKELYGKTVVQDWGYAVFGKVVDGFDVVDAIEGVSTKRHGYHDDVPSEP
                     VVIIKAEAV"
     gene            47847..49229
                     /locus_tag="WJJ54_000046"
     CDS             47847..49229
                     /locus_tag="WJJ54_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEZ7340975.1"
                     /translation="MASIARDIFKAYDIRGIVGKTLTDEAAYLIGKAIAAKAAEKGIT
                     RIALGRDGRLSGPELMEHIRRGFTDSGINVLNVGMVATPMLYFAAVNECGGSGVMITG
                     SHNPPDYNGFKMMLGGDTLAGEAIQELLSIIEKDGFAAAGKQGSVTEKDISGEYLKHI
                     TGHIRLKRPMNIAIDAGNGVGGAFAGKLYKGLGNEVTELFCDVDGTFPNHHPDPSKPK
                     NLQDLIAALKNGDAEIGLAFDGDADRLGVVTKDGNIIYPDRQLMLFAQDVLSRNPKAK
                     VIFDVKSTRLLAPWIKEHGGEPVMEKTGHSFIKSAMKKTGAPVAGEMSGHIFFKERWF
                     GFDDGLYAGARLLEILSASDNPSEVLNNLPQSISTPELNIALPEGSNGHQVIDELAAK
                     AEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQEAIERIQNQFKAVI
                     ESNPNLSWPL"
     gene            complement(49285..50040)
                     /locus_tag="WJJ54_000047"
     CDS             complement(49285..50040)
                     /locus_tag="WJJ54_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEZ7340976.1"
                     /translation="MIKIRNIHKTFGKNTILRGIDLDVGKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEDGQIEFDNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTAL
                     ENVMEGPVAVQGKPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNAMKELAREGWTMVVVTHEIKFALEVATTVVVMDG
                     GVIVEQGSPKELFDHPKHERTRRFLSQIQSTKI"
     gene            complement(50050..50766)
                     /locus_tag="WJJ54_000048"
     CDS             complement(50050..50766)
                     /locus_tag="WJJ54_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEZ7340977.1"
                     /translation="MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFV
                     IGMVIAVAVALVRIMPAGGIVRKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIY
                     IDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
                     RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFC
                     KVLFLIQARLEKRFDRYVAK"
     gene            complement(50756..51583)
                     /locus_tag="WJJ54_000049"
     CDS             complement(50756..51583)
                     /locus_tag="WJJ54_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ7340978.1"
                     /translation="MMLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIER
                     INNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMA
                     GLKAGRFDVVANQVGLTSPERQATFDKSDPYSWSGAVLVARKDSNIKSIDDIKGVKTA
                     QSLTSNYGEKAKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGV
                     KIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ"
     gene            51868..52776
                     /locus_tag="WJJ54_000050"
     CDS             51868..52776
                     /locus_tag="WJJ54_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HEZ7340979.1"
                     /translation="MNTPQSAIIPDHAQAGIFIEADFAANRLNDIKAACRASLDALTA
                     LKARFPDDILGLTIAFGSKAWATFGHTDEGSEIKPFSEMGNGLAPSTQHDMSIHIQSF
                     RQNAAYALAQSVLGAFGDSICVASEEHGLRLYQDRGLDGFVDGTENPQGDENVREVAI
                     IPEGKPDAGGSYVLLQKYLHDLKKWDAVPVAEQEASVGRGKETDDEFGRDVRLPDSHL
                     GRVNLKENGVGLKIVRRSLPFGKISGEHGLMFTAYCRTLHNIEAQLLSMFGDTDGKTD
                     LLLRHLSAAVSGGYYYAPSVERLQNL"
BASE COUNT        12483 a        14612 c        13064 g        12659 t
ORIGIN      
        1 taatccacta tagattaaaa tcacacaata tccaactatt cggaccttca tatgacacat
       61 accgtccacc tgcatttaga agaaaccgac aacttggcgt tgcagcgtct gtgcggttct
      121 tttgacaaca accttgattt acttgctaaa gcactcgata tccacatcag ccgccgtttt
      181 gaacatttca ctttcaacgg cgcatttgca cacgccggca aacgcgcact gctcaaactc
      241 ttggaaacgg cgcagacgcg cgacctaaac gacggcgaca tcaggcttgc cgccgtcgaa
      301 gcccaaaccg aagatgccgg tcatcaagaa aaaaaccatg accacgccta ttatttccgt
      361 accaaacgcg gcagcatcgg cggcagaacg ccacggcaga acggctatat ccgcgcccta
      421 ctcaaccacg acatcgtatt cggtctcggg ccggcaggta cgggcaaaac ctatctcgcc
      481 gtcgccgccg ccgtcgatgc gatggaaaaa caccaagtcg aacgcatcat tttagtgcgg
      541 cctgccgtcg aagccggcga gaaactgggt tttctgcccg gtgacctgac ccagaaagtc
      601 gatccctacc ttcgtccgct ttatgatgcc ctctatgacc tgatgggctt tgaccgtgtc
      661 accaagctga ttgaaaaagg cctgattgaa atcgccccgc tcgcctatat gcgcggcagg
      721 acgctcaacg gcgcatacat catcctcgac gaagcgcaaa acaccacgcc cgaacaaatg
      781 aaaatgttcc tgacccgcat cggcttcggc gcgaaagccg tcattaccgg cgacaccagc
      841 caaatcgacc tgcccaaaaa catcaaatcg ggattaaaag atgcgcgtga gaaactgcac
      901 ggcgtggaag ggctgtattt ccacaccttt accggcgaag acgttgtccg gcatcctttg
      961 gtgcaaaaaa tcgtcgaagc ctacgaatcg gcagaacacg actgacattc caatgccgtc
     1021 tgaaacccga tgcatggaaa atcgggcaga gaaaaacaga tacggaagcc aagctccgta
     1081 tccgtttccg tatccgtttc tttatccgtc caaccgatac atcaatcgaa ttttctgcat
     1141 cggattgcct catcttcgca aaacattgcc gaagtttcgc ggttgcacgc ctgacgcact
     1201 ttctgccgcg ccacgccttc attccgatcg cttgcctcaa acgtcttctg aaaaggcgta
     1261 acgctgcata catacatggt ggaatttgaa ccgaaaaggt cgattttgac ggtattgctg
     1321 ccgctttcca atacggcgac acggtgttcc aactgcgcca gacgtgcttc caaatcgccg
     1381 attctgtcgg caaatgcagg catggcggca cacgcggtca aaatgcccaa aatacatttt
     1441 ttcatcaatt tttccttgtt tcttgaaccc tgcccacccg gacatccttt ttccgagagg
     1501 cagggttaga ctttatttac ggggatgaat ccccttacaa atcaggataa tacatagaac
     1561 ggcactttat gcttcatccc atgtgttgaa acttcattgc tccttgtctg ttgaccctta
     1621 ttcccaatcc gttcccacaa ccttcggctt gggtttgcgc ctgcgacggc ggcgtttttt
     1681 cgcctgtcct tcgttttttt cgtgtcgggc ggcggcttcg tttttggtca tctccgaccg
     1741 ctgttccgtc gatgccgtct gaaacgccgt ccaccactcg gcaagggcgc ggtccgcatt
     1801 gccggtttcg gcgcgcaaga gcaggaaatc ataggcggca cggaaacgcg cctgtgcaaa
     1861 cagtttgtgc ggccttgcgc ctttgcgatt ttcaaactgc ggctggaaca tccaaatttc
     1921 gcgcatcgtg gcggaaaagc gttgcggcac gccccaaccg cgttcgacgg tttcgcgcat
     1981 cgtattgatt gcatcggaca gggcgggcgc gggtttcaaa ccctgttgca gattgctttt
     2041 ccaatggcgt tccaactcgg gccacatcag agccgccaat acaaaaccga ccgaaaccga
     2101 tttgtcggca cgcagccgct catcggtatt tttcagggca agcaccgtca tttttccggc
     2161 gatgccgtct gaaacacgca aggcattgag cagcggatgg atgtcgtccg gtatgtcaaa
     2221 tccgttcaaa cgtttcagac actcgcgcgc gtgccctgaa aacagcagtt tcatgatttc
     2281 gtcaaacagc ctcgctaccg gttcgtgctt cagacggcat atcgattcgg caatcggtgc
     2341 ggtggtttct tccgacagct caaagcccaa tttgcccgac aggcggatgg cgcgcaaaat
     2401 cctgacaggg tcttcctgat agcgttcggc ggcatcacca atcataacca gcctgcgggc
     2461 ggcaacatcg gcaatcccgt tgtggaaatc caaaatctct tctttttcag gatcgtaata
     2521 caaggcattg caggtaaaat cgcgccgcat cgcatcttct tcgatgctgc cgtaggtgtt
     2581 gtctttcatg attctgccgt gcgcgttctg atgaaccttc gcaccgccgc gaaacgtcgt
     2641 tacttcgata atctccgcac cgttcatcac atggacgatt tgaaaacgcc tgccgatgat
     2701 gcggctgcgg cggaagagtt tgtgcacctg ttcgggcgtg gcatcggttg ccacatcgaa
     2761 atccttgggt tcgatgccga gcagcagatc cctgatcgcg ccgccgacca cataagcctg
     2821 aaaccccgcc cctttcagac ggcgtatgac gttttcggcg gcaaagctca acatttcggc
     2881 acggatgttg tgtctttcgg cgggaatgac cgttttactt tccgcttttt tactgctccg
     2941 accggaaggc agcatcttat tcaaccattt tttcagcata aatattctga cccgaagagc
     3001 ggcatctcca cgggcaaccg tgttcagacg gcatcaggcg gtacgattcc gcaagatgcc
     3061 gtaaccataa acaaaaggcg tagaaactac gccgtccgaa tcccaccgcc ctcgcggcgg
     3121 caacgcgcca ttataacaga ttgcccttta aaaaaatcag accctgcttt tgtggcggag
     3181 tctgaaattt gatgcacctt atatattgcg tccctaagaa gggatgatta acaaaaatta
     3241 acgcccttta ctttcttttc cgattgggaa cattcccgtc gtacaaacag gcaaatgaag
     3301 gaacagaaat cacattcaaa cggcgttccg ccacctctac gccgcttccc agtagtcgat
     3361 ataaagctgc aattcgagat tgttgcgcca ttcgttggca acggggcggt aaaccgtgcg
     3421 gatgtattcg ggaatgtctt cgctgcaacg ccaaaacatg gcttcaaatt cgcagccgtc
     3481 tttttgcagc cagacttttt tgtgtttgcc ctccgcgccc aaaggttgct ggcggacgac
     3541 gtggaactcg tcggtaaagc tcggcggcgc gaagccctgc ccccaaacgt ggcgggcgag
     3601 gttttgcgcc tgttccaacg tgatgtcgca tgcaggcagg ctgccgtcgg tgatgaaagt
     3661 ttgcgacaaa tcgtcttcgc acaccatctc gcgcacggct tcttcaaagg ccgtctgaaa
     3721 cgcaggaata ttgtgttcga gtatgctcaa acctgccgcc atcgcgtgtc cgccgaattt
     3781 caaaatcaaa tcgggatggc gtttggacac caagtccaaa gcatcgcgca ggtgcaaatt
     3841 gggaatggag cgtcccgaac cgcgcacttc gccgttgtcg gcaggcgcaa acacgatggt
     3901 cggacgataa aaacggtctt tgaggcggct ggcaacgatg ccgaccacgc cttgatggaa
     3961 gtcgtcgcga tacgccacca aagtcgtctg acctgaaggc agggtttcag gaaaagcatt
     4021 cagcgcgtct tgcagcatag actgctcgat ttcgcgacgt tcgatattga ggttgtttaa
     4081 ctgcgccgcc agttcctgcg cctcggcatc atctcgcgcc aacagacagg caataccgac
     4141 cgacatatcg tccagccgtc cggcggcgtt gatgcgcggc cccaacgcaa aacccatatc
     4201 aaacggctgc gccttgcgcc aatcgcgccg cgccacttca aacaaggcgc ggataccggg
     4261 gcgcattttg ccggagcgca tccgtttcaa accttgcgac acgaggatgc ggttgttgtg
     4321 gtcgagaggg acgacatcgg caaccgtgcc gagtgcgacc aaatccaaaa gttcgcccaa
     4381 attcggctct ttgatgccgt ctgaaaaata attgcggcgg cgcaattcgg cacgcaacgc
     4441 catcaataca taaaaaatca cgcccacgcc cgccaagctt ttgcttggaa aaccgcagcc
     4501 tttttggttc ggattgacga tgatgcagtc gggcacggtc tcggcaggca gatggtggtc
     4561 ggtaacgatg acatccaaac ccagagcctg cgccctcgcc acacctgcga tgctggcgat
     4621 accgttatca accgtaatca gcaaatccac accttgctct gccgcgattt cagccagctc
     4681 gggcgttaag ccgtagccgt gctcaaagcg gttgggcaca aggaaatcca ctttcgcccc
     4741 catcgccgcc aaaccgctca taccgacgga acacgccgtc gcgccgtcgg catcatagtc
     4801 ggcgacaatc aggatttttt ccttgcgttc aaccgcatcc gccaaacggc cggcggcggc
     4861 ttcgcagttt gtcagcgttt gataaggcag gagggaagcg agtttgtcgt ccaattcggc
     4921 aggactttgc acaccgcgcg aggcacaaag ccgggcgatt aaaggatcgg caccggcggt
     4981 gagcaaatga ttaaaaacgt cggtattgac ggatcgggtt tggattttga ctgacatgac
     5041 gaagtttttt caagatatga tgaggctgaa atgccgtctg aaagcttttc agacggcatt
     5101 gcttttcatt tgcgggcggc atccacgacc gcgcccagag ccgccgcagg caaagccagt
     5161 accgcacccg ccgcatccag tatcaacaag gggggcgtat ataagatatt tccaaacagc
     5221 ttggatttgt cggtatgttt ttcagtaacc gtgtaataaa tatcgacagg cacactctgt
     5281 tcaaaatggt aatcggcgtt cagtttttgc ggtgtggcgt agtatttgcc tttggcggat
     5341 acgcagcgcg tgtaaatagt ccgattgtca agttcgaccg cttcaaactc aagctgtttc
     5401 agcttggcga tgtcagcagg cctgtcggta tcgtagcgca ggcaaaggcc ttcggtactg
     5461 aaattctggc tgccaggcga ttcgagtttg accggcaggg cttggtggcg agcatagctc
     5521 ggggtatcct caactatttg gaagggtttg tccaacccgg ccttcaaaat gcccgtcagc
     5581 ttcgccgaat cttcgggatt gacgacgaac cagtatttcc cgcccatcat caccagactg
     5641 cccttttcca attgggcatt gtctttggca accacaccga aggcgcggat ttgatccttg
     5701 tcaacgtgtt tataggcggt cgtttggctg aacgggtcgt tcatgcccca catcattgcc
     5761 gtacagccgt tcaacatcaa ggctgccgcc aaaacggcgg cggtcgtttt acggaacaac
     5821 attttatcct ccaatctaaa taacggcgga tgtcgtctga aaatatgcct aaatttccgc
     5881 gtccccgttt tccataacgg ttttcaactc ttgaaacagg gcgcggaaat ttttcggcgg
     5941 tttgttctgt tcctgttctt ttttggtatt gcggatgagc gtcctcagct tgcccgcatc
     6001 ggcgtttgga aaatcggaca taaactgcgt cagcgcgccg tcgtccgcca gcagctccat
     6061 ccgcgtccgc tccacacgtt gcaaaaaggc gttgtgcgcc gcatcgtcgc cgcgcagctt
     6121 ggcaagaaat gcctcgatgg gcgcgggatc ggtatcgcgc atcagtctgc cgataaattg
     6181 cgcctgccgc ttgagcgcgc cgttggatgt gattttttta taggtaacga tggcttcgta
     6241 caaatcttcg tccaagccga tttttttcaa cgtgtcgctt gagagcttgg tcagctccat
     6301 acccaaatcc tgcaaaccgt tcatctgctt tttcatttgg gttttgctga cccattcgtc
     6361 ttcttgttca aacatcttca ttctcaaatt ttatccgacg ggcgcatttt aacagaatga
     6421 ttccgcgttc agacggcatt ttgcaccgtc cgccctgcaa acggacgctt ttgcccctgc
     6481 cgcccgaaac ggttaaaatg ccgcaacgct ccaccaagaa agatttctat gctgttcaac
     6541 cacaccgctt ccgaacttct cgacctctgc cgccgcacgc tcgacttggc aaaagcagcg
     6601 ggcgcgaccg ccgccgaagc cgatttcagc gaatccatcg gacaaagcgt cagcgtgcgg
     6661 ctgggcgaaa tcgaacaaat cgagttccag caggacaagt cgctggacat taccgtttac
     6721 gtcggcaaac gcaaaggccg cgctggcacc gccgatttct ccgaacaagc cctgcgcgac
     6781 accgtccgcg ccgccgccga catcgcccgc cacaccgccg aagacggttg cgccggactt
     6841 gccgatgcct gtctgatggc aaaacacatc ggcgaccccg acctttacca cgaatgggat
     6901 ttggatacgg aagccgccgt cggcttggca aaacaatgcg aacaagccgc cctgaacgag
     6961 gatgagcgca tcgaaaactc cgaaggcgcg gcggtgcaaa ccggccatta ccaatacgtt
     7021 tacggcaaca cccacggttt tgccgcacac cggcaaggca cgcaccacag catttcctgc
     7081 agcgtcgttg ccgccgacga aaacggcatg cagcgcgact actggtacga ttccgcctgc
     7141 cgccatccgg atatggacag ccccgaaacc atcggtcaaa ccgccgccga acgtacctta
     7201 cgtcgtctga acagccgcag catcccgaca ggcagctacc ccgtcctctt cgataccacc
     7261 gtttcgggcg gtcttatcgg acacctcgtc ggcgcactct ccggcggcgc gctctaccgc
     7321 caaagcagtt tcctgatcga cagcatcggc aaaaaagtcc tgcccgattt cctcaacctg
     7381 cgcgaagaac cgcacatccc ccgctctttc cgcagcagct attttgatgc ggaaggcgtt
     7441 gccaccgcgc cgcgcttcgt gattcaaaac ggcattgtcg aaggctattt cctcagcagt
     7501 tacagcgcgc gcaaactcgg tatgcagacc acgggcaacg ccggcggcgc gcacaacctg
     7561 tatttgaacc atacgcacga aacgcaatcc gacctgctga aagaaatggg gacgggattg
     7621 ttggtaaccg aactgatggg acagggcgcg aacaccatta ccggtgacta ctcgcgcggc
     7681 gcggcgggtt tttgggtgga aaacggcgtg attgcctacc ccgtccacga gattaccgta
     7741 gccggacgct tgcaggatat gtaccgcgac attgtcggcg tggcggatga cgctttgcgg
     7801 cgttcgtcca acaaaatcgg ctcgattctg attgcgggga tgacggttgc cggaagctga
     7861 acgccctgcc gatgccgtct gaagacgaag gcagcacgtt ttgccccgtg cctgcccgtt
     7921 tgccgtttta tgccgcaccg ccttttgccg acaacattgc acattttttc atcagcactg
     7981 attttccctt atccgtcaaa atactaagcc acttgtccac aacagggtac acacaagttc
     8041 aggataaggc gtgcggggat tggggttttt ccgccgccgg caaaacggca gacaaaaacg
     8101 gcgggacatt gcctgtcccg ccgttttcaa atatacattt gaccgtacat caggaattaa
     8161 gcagcctgaa tgttggcggc ctgtttgcct ttagggccgg tggttacgtc gaaagagaca
     8221 cgttggcctt ctttcagggt tttgaaacct tccatattga ttgctgagaa gtgagcgaac
     8281 aaatcttcgc cgccttcatc aggcgtgatg aaaccaaaac ctttagcgtc gttaaaccat
     8341 tttacgatac cggttgccat tagaaacttc ctatactcaa aaattaacaa aatcagcaaa
     8401 acaaggcata cggcaaaccg agccgtctgg cgttccttcc agcttgatat actcggcgga
     8461 tgcccaatcc tgcttaaccg tctttttaca tttgttaaga caaaacgtca agctatgttt
     8521 tcaaaaaagt gggaaaatag gcaaaagtac cgaaaataca acaaaaatgc cgtctgaacg
     8581 cggctttcaa atgggacaca ctatgaccgc gcaacaccaa tccgacacgc tcttgcaccg
     8641 tctgaacacc ctgccgccga aacgttacgg cgttttccta ttgaacgacg attacaccac
     8701 gatggaattt gtcgttgaaa tcctgaccga aatcttcatg ctcggacaag aacaggcggt
     8761 agcggtaatg ctcttggttc atcacgaagg caaaggcctg tgcggcactt acacgcgcga
     8821 tattgcccaa accaaacagc aacaagtcat gcagcgggca aaagccgaag ggcatccgct
     8881 gcaatgtatt gtcgaggaga tttaatatgc ttgcacccga attggaacag attttgcagc
     8941 agctttaccg cgaggcgcgt aaggctcatt atgaatttat cagcctcgag catctgcttt
     9001 tggtactcat cgaagaagat gcctccgtgc cgaacgtctt aaaactctgc ggcgcggatt
     9061 tgaaagtggt gtccgaacag ctcgccgcca gcgttgccga aaacaccccc ctgattcccg
     9121 aacacctttt agacacggtc gaaacccggc ccacgctcgg cttccaacgc gtgatgcaac
     9181 gggcgatggt gcatacccag tctgccggaa aagccgcagt cgaaccgttg gacgttttgg
     9241 tcgcgctgat gagcgaaacc gacagccaca ccgtctattt cctcaagctg caatcggtta
     9301 cgcgttttga agttttgcgc tgtattgccc acggctctcc cgatgaagat gaagacgatg
     9361 gcaactattc ttcagacggc atggacgacg ataatgaaaa ccgcaccaaa ccgggcaaaa
     9421 accctttatc ggcgtacacc gtcaacctca acgccgaagt caaagccggc cgtatcgacc
     9481 ctttgattgg tcgcaaacac gaaatggaac ggctggtgca aatcctatgc cgccgccgca
     9541 aaaacaatcc gcttttggtc ggcgaagcgg gcgtgggcaa aaccgcgctg gcggaagggc
     9601 tggcacatca aatcgtcaac ggcggcattc cagacgcgct caaagatgcc gaagtgtacg
     9661 cgctggatat gggctcgctg ttggcgggca cgaaataccg cggcgacttt gaagcgcggg
     9721 tcaaatccgt cttgaaacag ctcgaaaaaa tcccgcacgc cattttgttt atcgacgaaa
     9781 tccacaccat catcggcgca ggcagcacca gcggcggcac catggacgcg tccaacctgc
     9841 tcaaacccgc gctggcaaaa ggttcgctgc gctgcatcgg cgcgaccact tacgacgaat
     9901 accgcaccat tttcgacaaa gaccacgcct taagccgccg cttccaaaaa atcgacgtgg
     9961 tcgaacccac cgtttccgaa accgtacaaa tcctgcgcgg cttgaagccg atgtttgaag
    10021 ccttccacca agtccgctat acgcaaggcg cactcgaagc cgccgccgaa ctctccgcac
    10081 gctacatcaa cgagcgtttc ctgcccgaca aagccatcga cgtgatggac gaagcaggcg
    10141 cggcgcaacg gattctgccc aaatccaaac agaaaaaagt catcggcaaa gcacaaattg
    10201 aaaccgtcat cgccaaagtc gcgcggattc ccgaaaaaac cgtgtcgcac gacgacaaac
    10261 aagtgttgca attcctcgac cgcgatttga aaaacatggt ttacggtcag gaaaacgcca
    10321 tcgacgcgtt ggttaccgcc gtcaaaatgt cgcgctccgg ccttgccctg cccgacaaac
    10381 cgataggcag tttcctcttc tccggtccga ccggcgtggg caaaaccgaa gcagccaaac
    10441 agcttgccta ctcgatggac gtaccgctgc aacgctttga tatgtccgaa tacatggaac
    10501 gccatgccgt atcacgactc atcggcgcgc ctccgggcta cgtcggcttt gaacaaggcg
    10561 gccttttgac cgaagccgtc aacaaacagc cgcattgcgt gttgctcttg gacgaaatcg
    10621 aaaaagccca ccccgacatt ttcaacgtcc tcctgcaagt catggacgca ggcaaactga
    10681 ccgacaacaa cggcaagagt gccgatttcc gcaacgtcat cctaatcatg accaccaacg
    10741 cgggcgcgga aagcctcagc cgccctggcc tcggctttac cgccaagcgc gaacacggcg
    10801 acgaaatgca ggcaatcaac aagctcttca cgcccgagtt ccgcaaccgc ttggacgcga
    10861 ttatcccatt tgcacccttg tccgaaccca tcatcgtcaa agtcgtggac aaattcctgc
    10921 ttcagctcga acaccagctc ctcgacaaaa aagtcgaagc cgaattcacg ccggcattgc
    10981 gcaaatatct ggcggaaaaa ggttttgacc cgcaaatggg tgcgcgcccg atgcaccgcc
    11041 tgattcagga aaaaatccgc aaaccgctcg ccgacgaact gctgttcggc aaactcgccg
    11101 acggcggctt tgtgcggata gactgggatg ctgcaaaaga agaagccgtg ttgaaattca
    11161 agaaaaacaa agtcaaacct gaagcagaac ctgtttaacc agttgaaaaa taaaaagccg
    11221 tctgaaattt cagacggcat tttgtcaaat atcggtccct attccggcaa acttctccac
    11281 aaacgccgca atcttttgaa aaacactttg tttcttcgtc agatattgcg ggttgagcgg
    11341 actcattttc ggcagggttt cggtcagttc cgtaccgttt tcgctggcat agccgcgttt
    11401 gagcgagccg gtcaaatagc gtttggcggc gatttcgttc agaccttcgg cggcaatcaa
    11461 tcctgccgct tcgtgccgca ttacctcttg cgcgtaggtg taaaaggttt ccagtatggc
    11521 gggaacgtcg ggcactttgt ccaaatccgt atcgttgatg aaatccacaa tcagaccctc
    11581 tttggcgcgg tggccgatgc tggcgcggat gatgcggcgg atttcttcca ccagctccgc
    11641 tttgcctttg atttttttgt ggtgttcgaa aaccagttgc aagatgtaat ccagattgat
    11701 ttcctgtgat ttgagcaaat ccacctcaaa aaccacatcg tcccaatcga tttttgactg
    11761 ttctttctgt tcgcctgctt tttggcggcg caaccaatcg cggatgtcgt tgtaggcgga
    11821 acggtagtcc tgcaccgccc tttcagacgg catcggcact tgccgcattt cctgcacgtc
    11881 ttcatcgctc aagtagtatt tttcttgaaa cgccttcatc gcatcttcgt ccgccgcgtc
    11941 cacactctgc aactcgcgca gcgcggcaaa ttcatcgtag ttctgcaata cgttttccgc
    12001 ccgcaggtat tcgccgaaga gtttggcaaa atcttttttg tctttttccg tttcgatttc
    12061 gtcgggttcg gggaaacgtt cacgcaactc ttttgccaca tccaaataac cgcgccgcgc
    12121 ttcgccggtc tggctgtcgg tatagccgtt catgtattct tcgtagcttt tttccagcac
    12181 cacgtttttg gtgtgtttgt cgccgaacag ggtaatcgca tcaatggttg cctgctccaa
    12241 atcgcggaag cagacaatgt tgccgaaggt tttggtggca tcgtaaatgc ggttggtgcg
    12301 cgaaaacgcc tgcatcaggc cgtgatagcg cagattttta tcgacaaaca gcgtattcag
    12361 cgtcggcgcg tcaaaacccg tcaaaaacat gccgaccaca atcagcaaat ctacttcctg
    12421 atttttcacc cgttttgcca aatcgcggta gtagttctga aaggctttgc tatccgtgcc
    12481 gaaattggtt ttgaaacagg cgttgtaatc gttgatggca gcctgcaaaa attctttcgc
    12541 gctgctgtcc atcgcttccg gttcgaaggt ctcatcgaca atttcaccga cggcgttttg
    12601 ctcttcgttg gccgcaaagg aaaaaatagt ggccactttc aacgggtgca ggctgcctgc
    12661 ctgttgtgtt ttgaacgctt cgtaatagca ctttgccgca tccacgctgc tgacggcaaa
    12721 catggcgttg aagcctttgc cgcccgcatt caggcggtgc gttttctgcc tgaactgatt
    12781 caggatatat tgcgtgattt cgcggatgcg ttcagggtgc agcagggctt ggcggttttc
    12841 ggcggcactc agtttcttct cgtcctgttc cgcttccacg gctttgaact gcgggcgtac
    12901 atcgttgtaa tccactttga atttcaatac tttttcatcg cggatggcat cggtaatcac
    12961 ataagaatgc agctcccgcc cgaacacgcc cgccgtggtt tccgcgccca aagcattttc
    13021 aggaaaaatc ggcgtaccgg taaagccgaa ctggcagaat ttcttgaatt tctttttcag
    13081 gtttttttgc gcttcgccga attgcgagcg gtggcattcg tcgaaaataa agacaactcg
    13141 ctgatggtaa accagcagat tatcttcgcc cttcatcagg ttgttcagct tttggatggt
    13201 ggtaacgatg attttgttgt cgtctttttc caaattgcgt ttcaagcctg ccgtgctttc
    13261 cgaaccgttc acgctgtcgg gcgaaaaacg ttggtattcc ttcatcgtct gatagtccaa
    13321 atccttcctg tccaccacga agaaaacctt gtcgataaac gccgattccg tcgccagacg
    13381 cgccgcctta aagctggtca gcgttttgcc gctgcccgtg gtatgccaaa catagccgcc
    13441 gctttccggc ccgctccaat tcttcgcctg cgccgaactg ttgattttcc acaaaatacg
    13501 ttcggcggcg gcaatctgat acggacgcat aatcagcagc gtatcattcg catcgaacac
    13561 gctgtaatgc agcaaaacgc tcagcaatac gcttttctgc aggaacgtgg cggtaaagtc
    13621 tttcaaatcc ttaatcggat gattgtccga ccgcgcccaa ttcatcgtga aatcaaagct
    13681 gtttttgtcg cgcttggtag tgttggcgaa atagcgcgtg tccgtgccgt tggaaatcac
    13741 gaagatttgc aggaatttga acagcgaatt ttcgctgttg aagctctctt tgctgtaacg
    13801 atgcacctga ttgaatgctt cgcgcacagc cacgccgcgc tttttcaatt caatctgcac
    13861 cagcggcagg ccgtttacca acacggtaac gtcatagcgg tttgcatgcg tgcccgtctg
    13921 ctcaaactgg ttgataagct gcacatggtt gcgggcaagg tttttcttgt ccagcagata
    13981 aatgtttttc agacggccgt catcaaaagc gaaatcgtaa atatggtcgt cgtggatttt
    14041 gcgggtttta tcggtaattt tttcagacga cctgtccaga tactccgtca aaaaacgcgc
    14101 ccattcgccg tctgaaaacg ccacatcgtt cagccgctgc aactgcgcgc gcaggttttc
    14161 cagcagcctg ctttggctgt tcaaatcctt gcggtattcg taaccctgat tctgcaaatc
    14221 ggcgactaac tccgcttcca actggttttc cgattggtag ctgcccgact gttcgatttt
    14281 ttcatattgg tcgagcacga tgaaattcgg cgtttcggcg atgggtttgg tttcgaggtt
    14341 catagttcgt cctttgcagt gtcgggtgtt aaacggttta atgttcggat tgggctgcct
    14401 gaaaatgtgc aggctgcttt ggttggcttc ggcggaatgc ggggcggttg tgtccgccgt
    14461 agggtgggct tcagcccgcc gccccgcctg ccgttgtttt actgttgttg cagcttgccg
    14521 ttgtttcggt gggctgaagc ccaccctact ttgtctgcga cttctacccc accgatgccg
    14581 tctgaatcat cccaatcggg tttttctctt tgttttgagc atctatcgcc atattttccg
    14641 gtttccacac gctgcggcgg aatgcggggc ggttgccgct caccgtaggg tgggcttcag
    14701 cccaccgccc cgcctgccct tgttttactg ttgttgcaga ttgccgtttt tttcggtggg
    14761 ctgaagccca ccctaccgaa aggcaagcag ctgttcgcgg taatattcgt attgtttgcg
    14821 gcgcagggcg atttcgtgcg gcaggccttc gctgatggag tgggtcaggg tatcgaattt
    14881 gtcgaggatg gcgacgattt tttcttgttc ggggagtgga gggatgggga ttgggaagcg
    14941 tttaaaacca ttcatatcca cagaagcaaa actcgatgtt gtcgtattct ttttgcacca
    15001 ttcactaaga ttaaaacaat agtaataaag aaaataaatg ctgagtttat cggcaaattc
    15061 aggctttaaa gataaactgg taaatctttg gttggctaag aatggaacgg ttattagtgc
    15121 atgctcacct atggttgcag atgtagccat gataatagaa ttggctggaa atagcttacc
    15181 gccctttact gcgctttttg atatatgctg taatgaatta tctaaaatac gaccattttc
    15241 cctaatatct tccattctaa accaagggat tgagccattt tcccaatatt ctttatttga
    15301 tttggaaggg gtatagccat tcttcaagtc aaacacctcc cccaacgtct tccaaaccac
    15361 atctttcaga cggcattgat agccatcagc tatccccccc gatttgattg tcaaaatcta
    15421 aaagaaagtc gcggtaatac cggtattggc gtttgcgcag ggctaattca gcttccagct
    15481 cggtgaattt gtcaagtatt tttacaattt tttgttgggt ttccaggggt gggataggga
    15541 ttaataattt tttcaagtta ctggcattta gagcaggaat acctgtaaat gtacataagg
    15601 catgaatctc ttgttcaaat tcaagtaata tatgatagag aaaacgaaca tccaattctg
    15661 ttctattctt aatagtaact gcataattta agttgccacg aaaatatctt ccttcttgcc
    15721 acgttattga gccgactccc gctcctcttg ttgtgatgcc gatagggtca ttttcagtgt
    15781 tccattcatc aatatagcca agcggctctt tgccactgtt aataactgga taactaccaa
    15841 tattatttga gattttctgc ttacttacag cttgtcctgt ttttatgata gctatcccat
    15901 tttctccacc caacggcttc cactccaccg gtgccgtctg aatcatctca atcaattttt
    15961 tcgctttgct ttgcatatcc atggttgttt tccgtttctt tcccgctgtg gcgggatgtg
    16021 gggcggttgt ggggtgcttc ggctcactct gtccgtttgc cgttatttct gcgggctgaa
    16081 gtccgtcctg ctttcaggct gcctgcaatg gtgtgcaggc tgctttttca ggtagcctga
    16141 atggtagtta ttttgtgcgg tcttttttct gtttgatctg ttgcacggct gttttttcca
    16201 acgctttaac gctttccaga taggcttgct ccaccggcga caggatgcgc gcttcatagg
    16261 cgcggtattc gcgttcggct ttctgctctg cctgtttgcg gctgatgctg cctgcaccct
    16321 gtaatgtgcc ttgtccgtac agcccggaaa atttgtccaa ttcggctatc cagtcgcgca
    16381 tatacatggg gctttgctcc tgcgctttga tttccgctag gtcgaagaag gcggaaacca
    16441 gacggttcag gcggaacagt tcgtcttcgg tcagatagtt tttggcgatt ttggcttcat
    16501 tcagcgtggg gattgcgcct tgaaaggtgg tcagccccat aaagtctttg ctgctgtcgg
    16561 cacggctgta tatcagctca gctgcggttt gccggctggc ggcatagtgc agtttgtttt
    16621 gaacggcggc aaaaaaggtt tggctttcgc tgcttttggg gttgtagtct tggctggtgg
    16681 catataaatc aagcacttgc cggtataggg ctttttcgct gctgcggatg tcgcgaatgc
    16741 ggttgagcag ttctttccaa tagtcgccgc cgcctgtgcc tttcaggcgt tcgtcgtcta
    16801 tggcaaagcc tttggtcaga tattcgtcca gccgttcggt tgcccattgg cggaattgga
    16861 tgccccgcgc ggaacggacg cggtagccga cggcaataat catgggcagg gaataatggg
    16921 cgattttgcg gtttaccttg cgcccgtttt cattttgaac tgtcaactgg aagttgacag
    16981 ttgccttctc ttccaattct tgctctgcaa gaatggtttt aatgtgtttg ctgatatttt
    17041 gtttggtggt ttggtacagt tctgccatgt ccgcctgcgt cagccaaagc tgtccgccaa
    17101 attcctgcaa ggcaaattgg gcagtgccgt cgttggcggt gtataggatg atgctcatgc
    17161 ttcaatctct gcaatcactt cgtcaatttc acgccgcagc cgttcgattt tggcaacggt
    17221 ttcgctgatt tcggcgttaa gctgtttgat gtcgataatt tcgcgggtgt cttcgggttc
    17281 aacatagctg ctgacggcga ggttgtagcc gttgtctttg acggtttgct gggcggcgtt
    17341 ttgggcgata tgcggcacat cggctttatc ggcgaagagt ttgacgattt cggcaatgtg
    17401 ttcttcggtt aagacgttgt tgttggtttc ttttttaaag aagccgcctg cgtcgatgaa
    17461 ttggatgtcg gtattgtctt tgtgtttgga caaaaccagt atattgacgg cgataccggt
    17521 gccgtaaaag agattgggcg caagggcgat gacggtttcc acgtagttgc cctccaccag
    17581 atattggcgg attttctgct ctgcgccgcc gcgatagaaa atgccgggga atgagacgat
    17641 ggcggcgcgg cctctgccgg aaaggtagtt cagtgcgtgc agaatgaagg caaaatcggc
    17701 tttggatttc ggggcgagta cgcctgcagg ggcaaagcgg tcgtcgttga ttaaggtggg
    17761 gtcgccgctg cctatccagt tgatggaata gggcggattg gaaacgacgg catcaaaggg
    17821 tttgctgtct ttgagtttgg gattggtcag tgtgtcgccc aattcgatgt ggaatttgtt
    17881 gtaattgacg ttgtgcagaa acatattcat gcgggcgagg ttgtaggtgg tgtggttgat
    17941 ttcctgcccg aagaagcctt cttcgatgat gtgctcgtca aactgttttt tcgcctgcaa
    18001 gagcaggctg cccgagccgc aagctgggtc gtagattttg tttactttct cctgcccgtg
    18061 caccgccagc cgcgcaatca gcttggatac ggatacgctt tgcggggtga aaaattcgcc
    18121 gccggatttg cctgcgttgg cagcgtagtt ggaaatcagg tattcgtagg catcgccgaa
    18181 aaggtcgatg tggtggtctt caaaactgcc gaaatcgagt tccgccacgc cttttaggac
    18241 ggcggcaagg cgtttgttct tgtcggcaac ggtgctgccg agccggctgc tggtggtgtc
    18301 gaagtcgtca aacaggcctt taatgtcttg ttcggacgga tagccggagg cggagctttc
    18361 aatcgcggta aaaatttctt tcagcttggt gttgagctct tcgttttgat gggcttcggc
    18421 ggcaatattg caaaaaagct ggccggggta gatgaaatag cctttgactt tgacggcatc
    18481 gtctttgatt tcgggcgtga tgatgctgtc cggcatagcg gcgtaatcaa tactgctgtc
    18541 gcctgcctgc atatagtcgg taaagttttc gctgataaag cggtagaaaa gtgtgccgag
    18601 aacgtattgt ttaaagtccc agccgtccac cgcgccgcgt acttcgtcgg caattttcca
    18661 aatttggcgg tgcagttggg cgcgttgttg catttcggtc atcatcgaaa tccatataaa
    18721 agttaaacaa atcgaaatcg cctgatattt tcagacgatt ttttacgggc attcaaatta
    18781 agccaaattt tccagcatcc atttgacgta gcggtcgacg cctgatttga catcgaaaaa
    18841 ttcttcctta tatccggctt cgcgcaattt ggtgatgtcg gcttgggtga agctttggta
    18901 tttgcctttg agcgcgtcgg gaaatgggat gtagcggata aattcttctt ctaccaactc
    18961 ttttaaactc atttcaggtt tgccttcggc ggcgcggcag gcgttgacgg tggcagcggc
    19021 gagttcgtta aactgttggc tgcgacctgt tcctaggttg tagatgccgg aaagttcggg
    19081 atggtcgaag aagtagaggt tgactttggc aacgtcttcg acgctgacga agtcgcgggt
    19141 ttgttcgccg ttgccgtagc cgtcgttact gccgaacagg ttgacgtaac cgtgttcgcg
    19201 gtattggtgg aagtggtgga aggcgacgga tgccatgcgg cctttgtgtt gttcgtgttg
    19261 tccgtaaaca ttgaagtagc ggaagccgac gacttgggcg gtgagacctt ctttcatgcg
    19321 gcgacgcaat acttggtcga acaggaattt ggagtagccg tacacgttga gcggtttttc
    19381 gagttcgcgc tcttcgcgga agatttctcc tttgccgtaa accgccgcac tggaggcata
    19441 aaggaagggg atgcgttcgt cctgacacca gtccagcaaa tccagcgtgt actggtagtt
    19501 gttttccatc atatacaaac catcgtggtt catcgtatcg gaacacgcgc cttgatggaa
    19561 aacggcttcg atgttttgat aaggtaaaat gtgttccctc acttggcgga tgaattcgtg
    19621 tttgtcgaga taatgggcga tttcgcactc ggcaaggttt ttgaattttt cgcctttgct
    19681 caaattatcg acggcaacaa tgtcagtaat accgcgttga ttaagtgctt tgacgatgtt
    19741 gctgccgata aagccggccg cgcctgttac gatgatggtc atattcggtt tcctttgttt
    19801 tgagtaaaat taataaactt agttacaaga aatcatcgat attgtcctga aacacaaatt
    19861 tgcgatgata ttccaaatat ttttctcttc cttcgggata tattctcatc ttaatttttt
    19921 gcatttggat tgatattaag tttttcccat gtgtaacggc ttagtcgagt accgcaaatc
    19981 aaacgaccat catccaagaa agtaatataa ccttgatcga acaaccaatc ataagtcggc
    20041 gttaaagcta acccatttaa ataatctaat gcctctttct catttttctc agtaatacaa
    20101 accatataag gtttaatatg actagccctt aacaaaatct catctgtaat taatgtaaat
    20161 ggacattgcg acatatgatt tataacatcc ttgcgatatt tctgctgccc ttttctactt
    20221 ttctgtttaa tgatttcttg ctctacgaat tgattaaatt ctgaagccgg tatttctaat
    20281 ttttctcttg ataagagttg cgggtgcacg atagagcgaa attgataatc caaaaatatt
    20341 cggaaataaa ataatggttc tgaatcttct atatctttga caggcaatag tttaagaatt
    20401 gataaataac taattttggg caatacaatc ttacgccaaa ttgaccatat atcatcctcc
    20461 gaacggatat aacccctacg gtaaccttta gaattttcca aatggtctga tacatcatgg
    20521 attgaaaaga aaatattttc tgtaggcaga ttattaatac ttaaaacgta atcatcataa
    20581 aaccttgaaa tatcatgatg atatttctgt tcttgtttgt gatattcaac ttttgcatca
    20641 accaaataac gctgtaaatt tttcttatta aaaaaacaat ttttctgaat gaaaggatat
    20701 tctaccctcc ttccattttt tgtctcagta atcccccaat tttcatactc aaaaaatgta
    20761 cttagttttc gaccactatc atcaatataa ctacctacat atttgcgtgc ttccccatta
    20821 ccaccaaaaa cagataactt gttattcctg tgaataaaac tatcttccgc acgtaaattt
    20881 tgaatactat cgacaataaa atactctatg ttttcaatag taattctttg aaaatccggc
    20941 attttactct ccataaagcg taatatccat ttgttttaat atagcgatta atacatcaac
    21001 aacaatactg tttcccgctt ggcgatacat ttgagtatca ctaactaaaa ttttaaaatc
    21061 atctctaaaa cccattagcc gcaaacattc cctaggtgtt aatttacgaa tacgtccacg
    21121 attatgagta acataattat caaccccggc acgatgcatt ttatgcatag tttgcaataa
    21181 tgggcgagct acaggcaaat cagtttccgt actggtttta aaattttttg ttcctcctgc
    21241 caaaacataa tttttgattt tttcagaaag ataatatttt tcctcaacgt tatttacatc
    21301 aaaaataaag tcatcaaatt cagattcgcg ggctgcctga aaaataaaat caccatgcca
    21361 attaaattgt tgatttgctt tttggcataa ggcaatttct ccattaatct gtgtataacg
    21421 tttttgtcta tttttagaac tggtaacaaa tttcacaccc ttttcacgta aaaaatattt
    21481 gctatcagta tagtcctcca aaaaatcttg catagtatgt tctaattcaa tcttttcagg
    21541 aaactgaaaa ccatttatag gaggggtatg aaagccaaca acaaaaatac gctcacgatg
    21601 ttgaggaatc ccataatcct tactattcat tatttggaaa tataagtcat aaccaagtga
    21661 ataaaaaaca ctttttacaa ctttccaagt ttttccatta tcatgattga gcaagccctt
    21721 tacattttca taaataaata tctttggttg gacttcatcc acaacgcgag caaattcata
    21781 gaataatgtt cctcgtgtat cttctaatcc tgcacgtttg ccaaccatgg aaaatgcttg
    21841 gcaaggactg cctccaacta aaatatcaac ttgatttcta aactttctcg catcaaattg
    21901 agtaatgtcg ttatgccaaa aatcttcatt taatttatag tttccaagat aacttttttt
    21961 aacgtatgga tcaatatctc ctgcaaaaac aatggtatgg tttaaattta atcggtggaa
    22021 tgcctgttca accgcaccaa tcccgctgaa tacggttgct aatctaatat gtgaatcagg
    22081 tttaagaaaa gttttagatt tccaaccttg ttgactggga aagagcaaag ttttttgtaa
    22141 tcgagtatcg tgtgtctgtg ccattgtcga aatagtcata cttatatcgt tctgtttatc
    22201 ttatcaatat gaaaactaca ttgttgattg ccctgacaat gccttgatca attcggcaaa
    22261 cgagcaaacc gccgtaccga gtttcgccac gacaaccccg gccgcagtat tggcaaggta
    22321 catggcttcg ggcatggtgc agcctgccgc caaacccaag cccattccgg caatgacggt
    22381 gtcgcccgca ccggatacgt cgtaaacttc ttgggcgcgg gtgggctggt aaatcggttc
    22441 gccttcgctg aacaaggtca tgccttcttc gcttcgggtc agtaaaacgg cggtcaggtc
    22501 gaggtggcgg cgcaggtttt gcgctttttc ggtcagctcg ctttcgtttt tccaactgcc
    22561 gaccacttct ttcaattcgg cgcggttagg cgtaatcaga gttgcaccga catatttttc
    22621 gtaatcgtcg cctttggggt cgattaagac ggttttgccg gcgtgtttcg cccaatcgat
    22681 catatcggag atatgcgaca ggccgccttt gccgtagtct gaaaaaatga ttgcgtcgta
    22741 ttcgggcaag atttcgcggt atttctgctt gatttgttcc aacacttcgc agttgggatg
    22801 ttcttcaaaa tcaagacgga taagctgctg gttgcgggcg acgacgcgca gtttgacggt
    22861 ggtggcgatt tgtttgtcgc gcatcagata ggaggcgacg ccgtcctgca ccatcagcgc
    22921 atcgagcgcg tcggcggctt cgtcgttgcc ggttacggac aacagccctg ccctgccgcc
    22981 caacgaagcg atgttgcgcg cgacatttgc cgctccgccc gcgcgttggt cgattcgtcc
    23041 gattttcgcc accggcacgg gggcttcggg cgaaatacgg gacacatcgc cgaaccaata
    23101 gcggtcgagc atcacgtcgc cgacaaccag gactttggct tgcgcgaaac gggatttgag
    23161 ggtttcttgt tggaacttgg cggacatatt gcctccgttg tattttttca gacggcctca
    23221 gcctgtaagg ccgtctgaaa atcagtttgc ttcaaggttt gccacgcggt tcacttcgcg
    23281 caatacggct accggatcgg cagcttgggt tacaggacga cccattacca aataagtcga
    23341 accggcagcc aaggcttcgg ccggtgtcat gatgcggcgc tggtcatcat tattgtcggc
    23401 aacgtccaag cggatgccgg gcgtgaccaa gacaaaatcc tgtcccaatt cgcggcgcag
    23461 cggcgcggct tcttgggcgg aacagaccac gccgtccaag cccgaacttt gcgccagttt
    23521 cgccaagcgg atgacttgtt cttcaggggc ggtgttcaaa ccgatttccg ccaaatcgct
    23581 ttgttccatg ctggtcaaca cggttacgcc gattaagagc ggcttcgtgc cgtatccggc
    23641 aacggcttct gctgcggctt ccatcatacg gcggccgccc gatgcgtgca tatcgaccat
    23701 ccaaacgccc atatcggcag cgactttgca ggcttgcgcg acggtgtggg gaatatcgtg
    23761 gtatttcaaa tcgaggaaaa gtttgaaacc ttgattgatt aagctttctg ccaaattgcg
    23821 tcccgtcgcg gtaaacagct ctttgccgat tttgatttga cacaatgtcg ggtcaaggtt
    23881 gcggacgaat ccgagcgtgt ctttttcgtt ggcaaaatca agggcgacga taacgggggt
    23941 gcgttgttgc ggagtttgga agtcggagat taaaggattc atagtgtttt cgtttcgggt
    24001 tttcagacga cctttatcgt ctttttcgca gtatagtgga ttaactttaa accggtacgg
    24061 cgttgtctcg ccttagttca aagagaacgc ttctctaagg tgctgaagca caaagtgaat
    24121 cggttccgta ctatctgtac tgcctgcggc ttcgtcgcct tgtcctgatt tttgttaatc
    24181 cactataaca acgtaaattc aaaccgtagg tcgggcattg atgtccgacc tacgcggact
    24241 caagcctccg acaaactgtt tcggataaat ttgaaccggt acatcagccg tcattcccgc
    24301 gcaggcggga atccattgat aaaactcagt tcatcagatt taaacagcga ttgcccaaat
    24361 tcagaaatgg attcccgcct gcgcgggaat gacgccaaat gattattttt cggttgcaac
    24421 acgctgttta tcaaaaacag gtcgtctgaa aacctgattt tctgttttca gagtgcgaag
    24481 cctgcccgtg ggtacgacct tttcgattta tttgcccaat gcgcccaata cttcggcttt
    24541 cacggcttct accggctgag tgccgtcaac tttgatgtat ttaggcgcgt gttcgccttc
    24601 cagtttgctg taaaaatcga ccaaaacttc ggtttgctcg tggtaaacgg caaggcgttt
    24661 tttcacggtt tcttctttgt cgtcgtcgcg ctgaatcaaa tcttcgccgg ttacgtcgtc
    24721 tttgccttcg actttgggcg ggttgtaggt aacgtggtaa gtacggccgg aagccaaatg
    24781 cacgcggcgg ccgctcatac ggtcgacaat cacgctgtca ggcacgtcga tttcaacgac
    24841 tgcatccaaa tccacgcctg cttcaaccat cgcttcggct tgtgccaatg tgcgcgggaa
    24901 accgtcgaac aggaaaccgt ttttgcagtc gtcttgcgcg atgcgttctt tgaccatgcc
    24961 gataatgatg tcgtcgcgca ccaagccgcc ttcgtcaatg atttttttcg cttccaaacc
    25021 caagggcgtg ccagccttaa tcgcggcgcg gagcatgtcg ccggtagaga tttgcggaat
    25081 gccgaacgcg gcggtgatga attgcgcctg agtgcctttg cccgcgcccg gcgcgcctaa
    25141 aagtaatgct ttcatgaagt gatcctttga aatgtgttta ttggaatcaa acagatggtt
    25201 tacgattcta cacggcttgg cacaatagtt caaaaaccaa ctgcacaaac tgccatttgc
    25261 aagcaaatgt tttgcatacc tttgccgagt ctgatattca caagccggca actttttggg
    25321 acaatcccca aaatttcaaa acatcacacc ctaccaaaaa ggaacatccg tgaaacgaat
    25381 ttttctgttt ttggctacca atatcgctgt tttggtcgta atcaacattg ttttggcggt
    25441 tttgggcatc aacagccggg gcggcacggg cagcctgttg gcgtattccg ccgtcgtcgg
    25501 cttcactggt tcgattattt cgctgctgat gtccaaattc atcgccaaac aatcggtcgg
    25561 cgcggaagtt atcgacacgc cgcgcaccga agaagaagcc tggcttttga acactgtcga
    25621 agcccaagcg cggcaatgga acctgaaaac gcccgaggtc gccatctacc actcccccga
    25681 acccaatgcc tttgccacgg gcgcatcgag aaacagctcc ctgatcgccg tcagcaccgg
    25741 tttgctcgac catatgacgc gcgacgaagt ggaagccgta ttggcgcacg aaatggcaca
    25801 cgtcggcaac ggcgatatgg ttacgctgac gctgattcaa ggcgtggtca atacctttgt
    25861 cgtgttcctg tcgcgcatta ttgccaacct gattgcccga aacaacgacg gcagccagtc
    25921 gcagggaact tatttcctag tcagcatggt attccaaatc ctgttcggct tccttgccag
    25981 cttaattgtc atgtggttca gccgacaacg cgaataccgc gccgacgcgg gcgcggcaaa
    26041 actggtcggc gcgccgaaaa tgatttccgc cctgcaaagg ctcaaaggca acccggtcga
    26101 tttgcccgaa gaaatgaacg caatgggcat cgccggagat acgcgcgact ccctgctcag
    26161 cacccaccct tcgctggaca accgaatcgc ccgcctcaaa tcgctctgag ccgatttgaa
    26221 acgacaaaaa ccgtacgcgc aagcagtacg gttttttcat agtaaaccaa tgccgtctga
    26281 aaacatcggg tttgccatac cggcaccaac cgtatccatt tccgcaccgg atacgccgca
    26341 ttgatatacc ctgataaacc gtatccggac agaaaatata gtggattaac aaaaaccagt
    26401 acggcgttgc ctcgccttag ctcaaagaaa acgattctct aaggtgctga agcaccaagt
    26461 gaatcggttc cgtactattt atactgtctg cggcttcgtc gccttgtcct gatttttgtt
    26521 aatccatata tcagataaaa cggcagcaaa aatgccgtct gaaaccaatt agggcttcag
    26581 acggcatttt tactgcaaaa ccttatgcga acggatgatg cagcacaatc gtttcttcgc
    26641 ggtcggggcc ggtggagacg atggcgaccg gcgcaccgca gacttcttca atccgtttca
    26701 aatatgcttt ggcattggca ggtaatgcgt cgtagctttt cacgccgaaa gtggattcgc
    26761 tccaaccggg catggtttcg taaatcggct tgcaggcttc taccgcatca gagccgcaag
    26821 gcaggatgtc ggttttgccg ccgtcgggca attcgtagcc gacgcagata ttgatggttt
    26881 caacgccgtc cattacatcg agtttggtaa tacacatacc ggaaatgccg ttgatttgga
    26941 tggagcgttt cagggcggcg gcatcaaacc agccgcagcg gcgtgcgcgt ccggttaccg
    27001 aaccgaattc gtgtccgcgt tctgccaaac ctgcgccgac ttcgtcgaac aattcggtcg
    27061 ggaacgggcc cgaaccgacg cgcgtggtat aggctttgac gatgcccaaa acataatcca
    27121 gcatttgagg acctacgccc gcgcctgcgg aagcggctcc cgccagacag ttggacgagg
    27181 taacgaaggg ataagtgccg tagtcgatgt ccaacaacgc accttgcgcg ccttcaaaca
    27241 gcagtttttc gccgtttttg tttttctcgt tcaacacgcg ggacacgtcg gtaatcatcg
    27301 gcgcaatgcg cggcgcgact ttttcgataa ccgccatcac gtcttccgct ttaaccggtt
    27361 cggcattgtg cagatgttgc agttggacgt tgtaataagc aaggacgaca tccagttttt
    27421 cacgcagttt ttcaggatgc agcaaatcgg cgacgcgaat ggcgcggcgt gccactttgt
    27481 cttcgtaggc aggaccgatg ccgcggccgg tcgtgccgat tttgcctttg ccgcgcgatg
    27541 cttcgcgggc ttggtcgagc gcgatgtgat aaggcaggat cagagggcag gtcggcgcga
    27601 ttttcagacg gccttcgacg tttttcacgc ctgccgcgtt caactcgtcg atttcgccca
    27661 acagggcttc gggggagacg acaacgcccg aaccgatgaa gcagtccaaa ctttcatgca
    27721 ggatgccgct cggaatcagg cgcaaaatgg tttttttgcc gccgacaacc aaggtatggc
    27781 ccgcattgtg gccgccttgg aagcgcacca cgccgccggc ttcttccgcc agccagtcaa
    27841 cgattttacc tttaccctcg tcgccccact gtgcgccgat tactacaaca tttttagcca
    27901 tagccatata acctatcgat attaaaaatt attgcggaaa tccccaaacc ggtgcggctt
    27961 tgcgccccgc cacgatttgc ctttcatccg ccatgaacgg gtatttagcg tttcacgacc
    28021 tgccaaacgc cgtccgtctt tttcagacgg cctgcaagct cttccgaaac attgtgtccg
    28081 ataccgtaat cgattacgac acactgccct tgttcacgca aggcttcgac cgcttcgtgc
    28141 gccgcttcgg catcttccgc atcgaccaac acggcgggct gccgttcgat ggcgggcaaa
    28201 cgcccgataa agctgcgcaa gtcgaaactg aatcccgttg ccgggcgcgc cctgccgaaa
    28261 tatccgccca atccgtcata acgcccgccg cgcgcgaccg cgtcgtggaa atcggcggca
    28321 taggcggcat acagcaagcc cgtgtggtaa ttgtcgacac gcagctcgga caagtcgata
    28381 tggatttcac aatcggggaa tgcgtcgcac accgcctgca attcgtctaa cgcgccgccg
    28441 accgccgaca aatccggcaa ccgtccgcgc gcgtcggaca acacttcacg cccgccgtac
    28501 aggcgcggca acagcgagaa tgcttttgcc cacatgccgt ccagcttcca agccttgacc
    28561 tgcgcttcga ccgccccggt atctttatcc tgcatcaagg caagcagcgt tgcggactgc
    28621 cccgcatcca aatgtgccgc atcggacaag gcgcgaaata tgccgatatg ccccagcgaa
    28681 agcagcactt tgcccatatc ggcaattttc atgcttttca gcataaggtc tatcagctcg
    28741 atgtcgccac ggatatcggc aaaaccgtac atttccgccc ctgcctgcaa gggttcgcgc
    28801 atattcagca gaccgtcgga ctgcgcgtgc aacaccggac cggcataaca caaccggtta
    28861 atcccttggt tggcggataa aagatgggca tcgatacgcg ccacctgcgg cgtgatgtcg
    28921 gcgcgtatgc ccaactgcct gccgctgagc ctgtccgtta ccaaaatggt tttcagggaa
    28981 agccccgcat cgatatgcgt cagcagggaa tgtgcgtact ccatcagcgg aggctgtacc
    29041 agttcataac cgtgtacgcg gaacagtgcc aacaactgct ccctcgcgct ttcaagctgc
    29101 cgcgcgttcg tgggcagtac gtcggcgata tgttccggaa gctgccatgt ctgcatgaga
    29161 atctgccttc tattttatcc tgtaaacaca aaagactgcc cgatccgcaa tcagacggca
    29221 tctttgccgc aacgcatcac gccgctgtca aaacggcgat gcttctttct gattcagaat
    29281 ccgaacagcc cctgtccgac ggctcaatgc cgtcaagtcg ttaaaaccaa actttaccat
    29341 aaaatacaca caatctgaat atacttttat accctgtatc cgccgtctga cggcacggca
    29401 tttttttact atataatgtg caccattatt tctcatcact tcctgctgcc gttttctgct
    29461 tcagacggca tttttgttga ttgaacactt atgctgctcg acctcaaccg cttttccttt
    29521 cccgtcttcc tgaaagaaat ccgcctgctg accgcccttg ccctgcccat gttgttggca
    29581 caggttgcgc aggtgggcat cggttttgtc gataccgtga tggcgggcgg tgcgggtaag
    29641 gaagatttgg cggcggtggc tttgggcagc agcgcgtttg ccacggttta tattaccttt
    29701 atgggcatta tggcggcgtt gaacccgatg attgcccagc tttacggcgc gggtaaaacc
    29761 ggtgaagtgg gcgaaacggg gcggcagggg atttggttcg ggctgatctt ggggattttc
    29821 ggcatggtct tgatgtgggc gacgattacg ccgttccgca actggctgac cttgagcgat
    29881 tatgtggaag gcacaatggc gcagtatatg ctgttcacca gcttggcgat gccggcggca
    29941 atggtacacc gcgcactgca cgcctacgcc tccagcctga accgcccgcg cctgattatg
    30001 ttggtcagct ttgcggcgtt tgtgttgaac gtgccgctga actatatttt cgtttacggc
    30061 aaattcggta tgcccgcttt gggcggcgca ggctgcggac tggcgacgat ggcggtgttt
    30121 tggttcagcg cgctggcatt gtggatttat atcgccaagg aaaatttctt ccgcccattc
    30181 ggactgacgg cgaaattcgg caaaccggat tgggcggtgt tcaaacagat ttggaaaatc
    30241 ggcgcaccca tcgggctgtc ttattttttg gaagccagcg cgttttcgtt tatcgtgttt
    30301 ttgattgcgc ctttcggcga ggattatgtg gcggcgcagc aggtcggcat cagtttgtcg
    30361 gggattctct atatgattcc gcaaagcgtc ggctcggcgg ggacggtgcg catcggcttt
    30421 tcgcttgggc ggcgcgaatt ttcgcgggcg cgttatattt cgggcgtgtc actggtgtta
    30481 ggatggatgc tcgccgtgat taccgtgctt tccttggtat tattccgttc gccgctggta
    30541 agtatgtaca acaatgatcc ggcggtttta agcatcgccg ccaccgtctt actgttcgcc
    30601 ggcttgttcc aaccggcaga cttcacccaa tgtatcgcct cctacgcctt gcgcggctac
    30661 aaagttacaa aggtgccgat gttcatccac gccgccgcct tttggggctg cggtctgctg
    30721 ccgggctacc tgctcgccta ccgtttcgat atgggcattt acggcttctg gacggcattg
    30781 attgcctcgc tcaccatcgc cgccatcgcc ttggtgtggt gcttggaatt gtgcagtagg
    30841 gagatggtca gatcgcataa ggccgtctga aaactccgcc gattaaaaat atagtggatt
    30901 aacaaaaacc agtacggcgt tacctcgcct tgccgtacta tttgtactgt ctgcggcttc
    30961 gttgccttgt cctgattttt gttaatccac tatagaaacg atgggctgaa gcccgccact
    31021 ggcaatactc attttaaagt tcaaacccat gcaacccatc cgataccgaa ccgaccttac
    31081 cccctacaac actttcggcc tgcgcgccca agcccgagcc tttattgcgc ttgaacacgc
    31141 cgacgggttg cgcgacatcg tccggctacc cgagttcaac cgagatactg ttttatggct
    31201 gggcggcggc agcaatatcc ttttgatgga ggactacgcc ggtctggtcg tacatatgga
    31261 aaacaaaggc atacgcgaaa ttgctcgttc agacggcatg gttctgattg aagcgcaggc
    31321 gggcgaaatc tggcacgatt ttgtcctgca cgccgtcgcg ctgggtttga acggtttgga
    31381 aaacctgagc ctgattccgg gtacggtcgg cgcgtcgccc gtgcagaaca tcggcgcata
    31441 cggcgtagag gcgaaagatg tgattcacag cgtgcgctgc tttgatttgg atacggaggc
    31501 ctttgtcgag cttgccaatg ccgactgccg cttcgcctac cgcgaaagcc tgttcaagca
    31561 ggaaggtaaa gggcgttatg tgattgtttc ggttgtgttt gcattaaaag agcattttgt
    31621 gccgaacttg ggctacggcg atttggcggc agcggttgcc gaacggtgcg ccggcaggga
    31681 aataacggcg aaagaagttt ccgatgcagt gtgcgccgtc cgccgccgca aactgcccga
    31741 cccgggcatt ttgggcaatg tcggcagttt ctttaaaaac cccgtcgtcg gcgcgggaaa
    31801 agccgccgcc ctgttgcagc agcatcccga tatgccgcat tatccacagc cggacggttc
    31861 ggtcaaactt gctgccggct ggctgatcga ccaatgccgt ctgaaaggct tccaaatcgg
    31921 cggcgcggcg gtacacgaca aacaggcatt ggttttggta aacaaaaaca acgcctcggc
    31981 aaacgatgtc cggcaattgg cgcaacacat caaatttaca gtatttgctc agtttcaggt
    32041 agaattgcac gccgaaccta attggctgcc tgcttcgttc agcctgtaaa tccaaggagt
    32101 atgcccgtga cccgccccgc caaaatcaat acttacacac gcatcatcga cgccagcctt
    32161 gcgctcttca acgaggaagg cgagcgcaac atcagcacca accatattgc cgcccacttg
    32221 ggcatcagtc cgggcaacct ctattaccac ttccgcaaca aagacgaaat catcgtccaa
    32281 ctgttcaaac gttacagcga agccctgctt gcctacctga atgaagctgt gttgccgtct
    32341 gatgtggaag actccatcaa ctatatggcg ggcatttacg acgtgatgtg ggaataccgc
    32401 ttcctattca gcgacgtgaa caccctgctt gcacgcagtg ccgaactatt aggcgaacac
    32461 aatactttca cccaagccaa agtctccccg ctcttggtca acctgctgac ccagctcaac
    32521 ggtctgaaca tcatccaagc cgaccaaacc gctatgaacg atctcgccgt caatatgtgg
    32581 atggttacga aatactggtt cgacttcgac agctccctgc gcggccgcac caagctgacc
    32641 gaagactcca aagcacgcgg catccgccgc accttaagcc tccttcgtcc ttatcttttg
    32701 cccgaacacc gcaagaaata cgaccggaaa atcggcaacg gcaacccgta aacccacagc
    32761 gtccgaatca gccttcagac ggcacttacc cgacggtatc agcgaatgcg cgcagtcccc
    32821 ccgccccata tctccatcac aggcctaggt tacctcggcc tgccgctggc acaaaagttt
    32881 taccaacacg gcagccgcgt cgccgccata aaacgcagcc tgacttcgga cgacatcaac
    32941 ctgcccatac acctcgatac catcgacctc aatcaagaca gcgcgtttca aagcgcgaac
    33001 cttgcccgag atacaagctt ttggcggcac catgccaaca aacccgtttg gttctgcctc
    33061 ttgccgccat catcgctgac acattacgcc gataccgtca aacaatgggc agaacttgcc
    33121 cgggcgtgca acgtgcaaca cctgattttc acaagcagta ccagcgttta cggcgataca
    33181 gcgcgcgaat gcgacgaaat cgccctaccc gatccgcaaa ccgagtccgc ccgccaaatc
    33241 ctcgccgccg aacaacacct gctcgacagc ggcgttccga acatcgacat cctgcggctg
    33301 ggcgggcttt attgcgccga acgccatccc gtcagccgcc ttgttcaaaa gcaaaacatc
    33361 ccgggcggca accgccccat caacatcgtc caccgtaata tcgccgtcga aagcctgttt
    33421 cagacggcat tcaaacccgg cggcaggcgg ctgaaaaaca ttatcgaacc gcgccacccg
    33481 acacgacgcg aattctacac ggaagaagcc gccaaactcg gtttgccggc tcctgatttc
    33541 gcacccgacg acagcatggg caaaatcatc cgtaccgttt gcgataacag ctgaagcctg
    33601 taaaataagc gtcaacagca acaaacaggc attctccgcc ccgatcagaa aatatgtccg
    33661 ccctcctccc catcatcaac cgcctgattc tgcaaagccc ggacagccgc tcggaacttg
    33721 ccacctttgc aggcaaaaca ctgaccctga acattgccgg gctgaaactg gcgggacgca
    33781 tcacggaaga cggtttgctc tcggcgggaa acggctttgc agacaccgaa atcaccttcc
    33841 gcaacagcgc ggtacagaaa atcctccaag gcggcgaacc cggggcgggc gacatcgggc
    33901 tcgaaggcga cctcatcctc ggcatcgcgg tactgtccct gctcggcagc ctgcgttccc
    33961 gcgcatcgga cgaattggca cggattttcg gcacgcaggc agacatcggc agccgtgccg
    34021 ccgacatcgg acacggcatc aaacaaatcg gcaggaacat cgccgaacaa atcggcggat
    34081 tttcccgcga atccgagtcc gcaaacatcg gcaacgaagc ccttgccgac tgcctcgacg
    34141 aaataagcag actgcgcgac ggcgtggaac gcctcaacga acgcctcgat cggctcgaac
    34201 gcgacatttg gatagactaa ccttcagacg gcatccgaca tgaacagccc ttttcacaac
    34261 atcggcatcg taacccgccc caacacgccc gacatccaag acaccgcaca cacgctgatt
    34321 acctttttga agcagcacgg ctttaccgtc tatctcgacg aagtcggcat aaaggaaggc
    34381 tgcatctata cccaagacac cgtcggctgc catatcgtca acaagaccga actggggcaa
    34441 tactgcgacc tggtcgccgt tttaggcgga gacggcacct ttctctccgt cgcccgcgaa
    34501 atcgccccgc gcgccgttcc gattatcggc atcaaccaag ggcatttggg cttcctgacc
    34561 caaattcccc gcgaatatat gacggacaag ctattgcccg ttttagaagg gaaatacctt
    34621 gccgaagagc gcatcctgat tgaggccgca ctcatccgcg aaggcaaaac cgccgaacgc
    34681 gccatcgccc tcaacgatgc cgtcctctcc cgtggcggtg ccggacagat gattgagttt
    34741 gaagtcttcg tcaatcggga attcgtctat acccagcgtt cggacgggct gattgtctcc
    34801 acccccaccg gatcgaccgc ctattcgctt gccgccggcg gccccatcat gcaggcaggt
    34861 ttgcacgcct tcacactcgt acccatctgc ccgcaatcca tgaccaaccg ccccatcgcc
    34921 attcccgaca cgtccgaaat cgaaatcctc gttacccaag gcggcgacgc gcgcgtccat
    34981 ttcgacggtc aaacccatat cgacgtgcaa aacctcgacc gcatcaccat ccgccgctac
    35041 cgaaacccct tacgcatcct acatccgacc gactaccaat atttcaaaac cctgcgccaa
    35101 aaactgcact ggggcgaaca attggtctga accgaccctt accggaaaac acctatgaat
    35161 ccaaaaactc cccccgacca tacagaagat gccgtgcgcc tctccaaacg catggcgcaa
    35221 ctggggcttt gttcgcgccg cgaagccgac ggctacatcg aacagggctg ggtaacggtc
    35281 aacggcaaaa ccgccgtact cggtcagaaa gtttcaccgg cagaccgtat cgaactgaac
    35341 aagaaagccc acgaacagca ggcggcacgc attaccatcc tgctgaacaa acctgtcggc
    35401 tatgtcagcg cacaagcgga aaaaggctat aaatccgccg ccgaactgat tacccctgaa
    35461 aaccgctggg aaggcgacac cggccgcatc cgtttcgatc cgaaacacaa aatcggtctt
    35521 gcccccgccg gcaggctcga tatcgattca gtcggattgc tggtgttgac gcaggacggc
    35581 cgtatcgcca agcagcttat cggcgaaaac agcggcagtg aaaaagaata tttggtgcgc
    35641 gtgcgcggca aattggacga aaaaggactt gccttactga atcacggatt gagtttggac
    35701 ggtgaaaaac tgcgtcccgc ccaagtagaa tggcaaaacg aagaccaact gcgtttcgta
    35761 ttgaaacaag gtaaaaagcg gcaaatccgc cgtatgtgcg aactggtcgg actgcgcgtc
    35821 gtcgggctga aacgcatccg catgggtaag gtcaagctcg gcaggctgcc gcccggcaaa
    35881 tggcgttatc ttgctcccgg cgaatcgttt taaataaaca ttaaaaaatg ccgtctgaac
    35941 gtccttacgt tttcagacgg cattgcctta tgcccaaata acggtttctt ccaagggcct
    36001 gcgcgctttc gtggcgattt cctgaacgcg gtagccgaat gtcgcggcaa cggacacgcc
    36061 ccattctgcc gcatcgaaca aaccgaactg cccggacaat acgcgttcca tatcggcata
    36121 gttgaaacct tccaccgggc aggaatcgat acctgccatc gccgcacccg tcatcatgtt
    36181 gcccaacgcg atataggtct ggcggcaaca ccagtcaaac aaggcgcgcg aatcgtccaa
    36241 aatcttgatg tcgtcggctt gaaacgcctg atacctcgcc aaagattttg ccatggcatc
    36301 cggttcggta acgccgcgcc gtttgaggct ttccaacata aacgggctgt cgaagcgggc
    36361 atttttcttt gccaaaaaca ccaccaaatg actggcggta tccaaagcat ccgccatacc
    36421 ccaagaaaac ggcttgattg cctgtcggat ttcagggttt tgaaccacaa caaactgcca
    36481 aggctccgaa ccgaccgaac tgggcgacaa acgcccgagt tctaaaataa actgaaaatc
    36541 ctcggcactg attttacgtg ccacatcgta atgccggcat gatttgcggt ttttaaatgc
    36601 ggatagaacc tgctctttgc tcaatactgc catcgtacat cctttcatta cttgtattgc
    36661 aaattgattt cgtaccctat aagccgcccc cgccgtcggg ctttatccgg actttgcccg
    36721 tccttcggcg gatcggaaag taaagcggcg gcagattcgc caataacgcc ccaatgcctt
    36781 tcagacggca tttggatcat cgcaaacacg cctacggata cgcgatatag gcataagccg
    36841 aatggttgtg gatagattcg aaattctcac tctcgacaac gaaactcttg atgcgtttgt
    36901 cggcaatcag cgaagtagcg acatcacgca ccatatcttc cacgaatttc gggttttcgt
    36961 aggctttttc ggtaacatat ttttcatcgg ggcgtttgag caaaccgtag agttggcagc
    37021 ttgcctgcgc ctccacataa tcaatgactt cctcgatacc gacttctgca tcggcagtca
    37081 ggctgacggt aacatgcgaa cgctggttgt gcgcgccata ttgggaaatt tctttggaac
    37141 acgggcaaag cgaggttacg ggaatcatga ccttcatact gtagccgtat gccccgtctt
    37201 tgatttcgcc cgtgagacag acatcataat ccagtaagga ccgaataccg gaaaccggcg
    37261 cggttttctt gcggaaaaac ggaaaagaaa cgctgatttt gccggcgcgg gaatctaaaa
    37321 gcgcgaccat ttcggcagtc agcctgtgca attgtgcaaa atccaaggct tcggcatgtt
    37381 gctccatcaa tgcgacaaaa cgcgacatat gcgtcccctt ctgctcagca ggcaggtaaa
    37441 ccgtcatggt cagacgggca acggtggact ggatgccttc tgcagtttgc agggtaatcg
    37501 gaaagcgcag gtctttgata ccgacctgat tgatcggcag attgcgcaaa tctcggctgg
    37561 attgcacgtc tgcaatagtg ttcatgagtt gtttttcctt aatattcatg taattgttga
    37621 gatgtgtgca tggtatggcg tttccgccgg ggaatatacc gtcaatctgc aaatgcgaga
    37681 ttatatcact cgcttttagc agctgcattg attgtttcta tttttcagat agtgataaaa
    37741 tcttcgatta ttcacatcta cataggcaga gaccaaatga aattcgccac gaaagccatt
    37801 cattccagct acgattgcga cgaacacaac cgcgcgctga tgccgccgat ttatcaaaac
    37861 agtatgtttg cgttgcacga gattggcgaa aatgtgcctt accgttattc gcgcctgagc
    37921 aacccgaccc gtcagatttt agaagacacc gttgccgatt tggaacacgg tgcggcaggt
    37981 tttgcgtttt ccagcggtat ggcgggaatt gatgccgtat ggcgtacctt cctgcgcccg
    38041 ggcgatacca ttgtcgccgt cgccgatatt tacggcggcg cttatgattt attggtcgat
    38101 gtttatcaaa aatggggggt gaacgttgtt tttgccgatt taggcaatcc ggataatttg
    38161 gacgaactgc ttaaagcgca caaggtcaaa ctggtttggc tggaaacgcc gtccaatcca
    38221 cttttacgct tggtagacat caaagtcctt gccgcaaaag ccaaagcagc cggtgcgctg
    38281 gtcggtatcg acaacacttt tgccacgccg tatctgcaac agccgttgga tatgggttgc
    38341 gattttgtat tccattccgc taccaaatat ttgtgcggcc attccgacgt gttgatgggc
    38401 atcgtcgttg ccaaaaccaa agaactggcg cagcctttgc acgatatgat ggtgcatacc
    38461 ggcgcggttg ccggcccgct ggactgctgg ctggtgttgc gcggcatcaa aacactggct
    38521 ctgcgcatga acgcccattg ccaaaacgca ctcgaaatcg cgcgccgttt ggaagcccat
    38581 cctgccattg aaaaagtgtt ccatcccggc ctgccgtctc acgaacatta cgaactggcg
    38641 aaaacacaaa tgcccaaagg catcggcggc gtggttacgg tttatctcaa aaacgacacg
    38701 cgtgaagcgg caaacagcgt gattaaaaac atgaaactgg tcaaaatggc ttccagcctc
    38761 ggcggtgtgg aaagtttggt caaccattgc tattcccagt cccacagcgg cgtaccgcat
    38821 gatgtgaaaa tggaaatggg catcaaagtc ggtctgctgc gtttctccat cggcatcgaa
    38881 gacgcggacg atatttggaa cgatatttcc gccgcactcg atacaacttt gtaaactgta
    38941 aaaatgccgt ctgaaaccat ggtttcagac ggcatttcaa ttaacccggc cgaaaatcaa
    39001 cgcttcaaca tctttgccgc ctcaatagcg taataggtca aaatcccgtc cgcacccgca
    39061 cgtttgaatg ccagcaggct ttccaaaacc actttgccgc cgtccagcca gccgttggca
    39121 atcgctgcct gcaacatcgc gtattctccc gaaacctgat aggcataagt cggcacaccg
    39181 aactcgtcct ttacgcggcg gacaacgtcc aaatacggca aaccgggctt gaccattacc
    39241 atatccgcac cttcctgaat gtccaacgcc acttcgtgca acgcctcatc ggtatttgcc
    39301 ggatccatct ggtaggtctt tttatctgcc ttgcccaaat tgcccgaact gcctaccgca
    39361 tcacggaaag ggccgtaaaa tgcagaagca tatttggcgg aatacgccat aatccgcgta
    39421 tggatatgcc cggcatcctc caacgcctcg cgaatcgcac cgatacgccc gtccatcata
    39481 tcggaagggg caaccacctg cgcgcccgct tcagcgtggc acaaagcctg cttgaccaaa
    39541 acctctacgg tttcatcgtt catcacataa ccgttttcgt ccgtcagccc gtcctgaccg
    39601 tgaaccgtat aaggatcgag cgcgacatcc gtcataatgc ccagttcggg aaacctctcg
    39661 cgcagggcgc ggacggctgc cggcacgagt ccttcgggat tgtacgcttc ctctgcacgc
    39721 tcggttttgt ttgccgtaac cacgggaaag agtgccaaca tcggaatacc gagctttacc
    39781 gcctcttccg ccgtaaacag cagcctgtcc aaactttgac gcttcacacc cggcatagaa
    39841 ggcacatcct cctcgcgcgc cgacccctcc aatacgaaca ccggataaat caaatcatcg
    39901 gcggtcagcg tgtgttcgcg catcaggcgg cgtgaaaaat cgtccctgcg catacggcgc
    39961 atacgcgaag ccggaacatt gcggtaagga aactgcataa gccctccaat catcctgtca
    40021 acaattcaaa ccatacggaa gccgccgcaa cttgcagaca gcatcgggcg gcaatcaaaa
    40081 tccgttttca ccggaaaggg tttcggcccg ccgaaatgcc gcgccgaagg acggcgtccc
    40141 gcccattaaa gaacaatagc aaaacaacag cttcaggctg tcagccttcg atattcttac
    40201 gccacaatac caaaagtttc ccgatatgct gaacaggttg cgcgtcaacc gcctcacata
    40261 aggcagtgca gatttcgata cgttcggcac ggtcgtcgcc gaatacgcgc actttaatca
    40321 gctcatgcgc cgtcaatgcc gcatcggttt ccttgatgac cgcgtccgtc agaccctgct
    40381 gaccgaccat cacaacagga tggagatggt gcgcgcgcgc tttcagttcc aaaatttctt
    40441 tggtgttcaa tttggtatcc gtcattttcc tactgcttga ataaaaagaa taatgcggca
    40501 ttgtacgcga tttggcacga catcggcaaa attaacgtac aatacgcggt ttccattccg
    40561 acccgcgaac cactatggct gtacgttcca aatcctcaaa agcgtggctg cacgaacacg
    40621 tcaacgacca ctacgtccat atggcgcaaa aagacggcta ccgcgcccgt gccgcataca
    40681 aacttttgga aatcaacgaa aaagacaaat taatcaaacc cggcacggta cttgccgact
    40741 tgggcagcgc accgggaagc tggtcgcagg ttgccgccaa gctgacgggt acttccggag
    40801 cagttttcgc cttggacatc ctgcctatgg aagccatagg gggcgtctcc ttcattcagg
    40861 gcgacttccg cgagaacgac gtactggcac aattcgaaac cttgttggac aaccgcccgc
    40921 tcgaccttgt aatttgcgat atggcgccca atatgtcggg aaacgccgta agtgatcagg
    40981 cacgcagctt ttatctatgc gaactggctt tagacttcgc ctcgcaacac ctgaaaaccg
    41041 gcggcagctt tttggtcaaa gtctttcagg gtgcaggcta tcaggaatac atggcagcca
    41101 tgcgcgaaat tttcggcacg gtgcagacgc gcaaacccga agcctcgcgc aatcgctcca
    41161 gtgagattta tttattgggc aaaaataaac gctgacaata cagacggcgt gctttacaat
    41221 catttccgtt ttacacctca attatggagc cttgctaagt ggggaacacc tttaaatcaa
    41281 tccttgtctg ggtcgccttg ggtatcggcc tgatggctgc gttcaacgct ttagacggta
    41341 aaaaagaaga caacgggcaa atcgaatatt ctcagttcat ccaacaggtc aacaacggcg
    41401 aagtatccgg cgtcaacatc gaaggatccg tcgtcagcgg ctacctgatt aagggcgagc
    41461 gcaccgacaa aagcaccttc ttcaccaacg cgcctttgga cgacaacctg attaaaacac
    41521 tgctcgacaa aaacgtccgt gtaaaagtaa cgccggaaga aaaaccgagc gcgctggctg
    41581 ccctgtttta cagcctgctg cccgtcctgc tgctgattgg cgcgtggttc tactttatgc
    41641 gtatgcagac gggcggcggc ggaaaaggcg gcgcattctc attcggcaaa agccgcgccc
    41701 gcctactgga caaagatgcc aacaaagtta cctttgccga tgtcgccggc tgcgacgaag
    41761 ccaaagaaga agtgcaggaa atcgtcgatt acctcaaagc gccgaaccgc tatcaaagct
    41821 tgggcgggcg cgtgccgcgc ggcatcctgc tggcgggcag cccgggtacg ggtaagacgc
    41881 ttttggcaaa agccattgca ggcgaagccg gcgtgccgtt cttcagcatt tccggttccg
    41941 actttgtcga aatgttcgtc ggtgttggtg cgagccgcgt ccgcgatatg ttcgagcagg
    42001 cgaagaaaaa cgctccctgc atcatcttta ttgatgaaat cgacgcagtc ggccgccaac
    42061 gcggcgcagg tttgggcggc ggcaatgatg agcgcgagca aacattaaac caattgttgg
    42121 ttgaaatgga cggttttgag agcaatcaga ctgtaattgt gattgcggca accaaccgcc
    42181 ccgacgtact cgatcctgcg ctgcaacgcc ccggccgttt cgaccgccaa gtggttgtcc
    42241 ccctgccgga catccggggg cgcgaacaga ttttgaacgt ccattctaaa aaagtgcctt
    42301 tggacaaatc tgtggattta ttgtccctcg cgcgcggcac gccgggtttt tccggcgcgg
    42361 atttggcgaa cttggtcaac gaagccgccc tgtttgccgg ccgccgcaat aaagtcaaag
    42421 tcgatcagag cgattttgaa gacgccaaag acaaaatcta tatgggtccg gaacgccgca
    42481 gtatggtgat gcacgaagac gaaaaacgtg cgacggcgta tcacgaatcc ggacacgcga
    42541 ttgttgccga aagcctgccc tttaccgacc ccgtccacaa agtaaccatt atgccgcgcg
    42601 gacgtgcgct gggtctgact tggcagcttc cggagcgcga ccgcatcagt atgtataaag
    42661 atcagatgtt gagccagctc tccatcctgt tcggcggacg gattgccgaa gacatcttcg
    42721 tcggacgcat ctccaccggc gcatcaaacg actttgaacg cgcaacccaa atggcgcgcg
    42781 aaatggtaac gcgctacggc atgagcgaca aaatgggcgt gatggtttat gcggaaaacg
    42841 aaggcgaagt cttcttagga cgcagcgtaa cccgttcgca aaacatttcc gagaaaaccc
    42901 agcaggacat cgatgcggaa atccgccgga ttttggacga gcagtatcag gttgcctaca
    42961 aaatcctcga tgaaaaccgc gacaagatgg aaaccatgtg caaagccctg atggaatggg
    43021 aaaccatcga ccgcgatcag gtactggaaa tcatggcggg caaacaaccc agtccgccca
    43081 aggattacag ccacaacctg cgcgagaatg cggacgcggc ggaagataac gcgccgcacg
    43141 ctccgactcg ggaagaaacc gaagcacctg ccccggcaga caccgcttcg acagagtccg
    43201 agcagcagcc tgaaaacaag gcttaacttc ccgaacaaac ggcagcccgc aagctgccgt
    43261 tttcccatcc tgttttcaga cggcattttc cgctcaatgc cgtctgaaac gccaaagccg
    43321 tatcggtttt tgcggatctg cgatatggcg gtttaaattg aaatcagacg aggcaaggct
    43381 gtaccggttt aaaattaaac cgctataata ccgcctttcg aatacacgcc cgcattggtg
    43441 atgcctgtga aaaaagttga aaaaaacatc ttggtgctgc acggcgcgga caaaatgttc
    43501 gagctggtcg ataaggttga agactatccg cactttctgc cgtggtacag caagaccgag
    43561 gtcatcgggc gtagcggcaa cgaactgaag gcgcggctgt ttatggacta tatgcacgtt
    43621 cgccaatcat tcgccacgca caaccgcaac attccgggca gggaaatccg tatggaactg
    43681 ctcgaaggtc cgttcaaaac cttacgtgga acgtggaaat ttatcgattt gggcgacgat
    43741 atgtgcaaaa tcgaattcaa tttggaatac gatttttcca atgccgtttt gtccgcctta
    43801 atttcccccg tcttcaacca cctttccgcc acgctggtcg aagcgttcgt caaagaggca
    43861 gaccgccgtt atgcttgaaa ttgagattgt gtacgggctg cccgaccgac aggttttgaa
    43921 aaccatgcag cttgccgagg gaacaaccgt ccgcgccgcc gcactgcaaa gcggtttgga
    43981 cggcatattt gaagatttaa acctgcattc cgcgcctttg ggcattttcg gcaaagccgt
    44041 caaagacgac acgcccctgc gcgacggcga ccgcatcgaa gtgtaccgcc cgctgttgat
    44101 cgatcccaaa gaagcgcgcc gcaaacgcgt tcaaaatcaa gaagaataac catgccgtct
    44161 gaagccttca gacagcattc gacagaaaca cggaaaatat catgtcaaac aaaatcaaaa
    44221 tgcttgtcgg attgggcaac cccggcaaag aatacgaaca aacccgacac aatgcgggtt
    44281 tttggttcct cgacgaactg gcgtggaaat ggaaggcttc atttaaagaa gaaaaaaaat
    44341 tcttcggcga agtcgcccgt gccgccctgc ccgacggcga tgtctggctg ctcaagccga
    44401 ccacgttcat gaaccgttcc ggacaggcgg ttgccgccct tgcgcagttc tacaaaatca
    44461 aacccgaaga aatcctcgtc gtccacgacg aactcgacat tccctgcgga cggattaaat
    44521 tcaaactcgg cggcggcaac ggcggacaca acggcttgaa agacattcag gcaaaactcg
    44581 gcacggcaga ctattaccgc ctgcgcctcg gtatcgacca cccaggcgac cgcaacctcg
    44641 tcgtcggcta tgtcctgaac aaacccagta cggaacaccg ccgacagatt gacgatgccg
    44701 tcgccaaatc cctgcaagcc atacccgaca tccttgccgg caaatgggaa gaagcaaccc
    44761 gcttcctgca cagcaaatga cccgatgccg tctgaagccc tttcagacgg catgttcccg
    44821 atttccatat ccgaacagtc atgaccgaac tcaagcagct tatccaaacc gaatccatcc
    44881 ccgtcatcga agaaaccctc gatttcctgc tgtacgaatg cagcatcgac gacgcaccat
    44941 ccgccgaaga agtggcacaa tggcgcgaca tacttgccgc acgcggcggc aaattcctgc
    45001 gcctgtccaa aatctgccaa acgtggctgg acgaggaggc ggcatgaagc tgccgcgcaa
    45061 ccgcttcagc ctgctttccg cattgtggtt tgccggcggc atctattcgc tgctcttcaa
    45121 agctgccgaa accgcgccac cgccttttcc gcattttgac aaagtggcgc acctcgccct
    45181 gtttttcgca caaatctggc ttctgaccaa agcattcaga accgacaacc gccccatccc
    45241 ctatcgcagc ctgatggtct ttgccctctg tttcgccgtc gtcagcgaat gcgcgcagga
    45301 gtggctgacc gaaacccgaa ccggcagtct gggcgacatc tttgccgacc tgacgggtgc
    45361 attgctcgca ctctttgccg cacgttccgc cgaccgcccg gactgaatcg gtttattttc
    45421 cccaaacagg atgcacctct tcccgataca tcctattttt ccccttacat atcaatccca
    45481 tctcataaac aaaaccgaca aatcgtttac aatatattta cactacatca gattacaaat
    45541 atactcgaac cagttgcaga agcggcgatt ccacaaaccg tttcggattg cacgacacaa
    45601 aagaaaaacc gattttgttg ccttaaagga gtattcatga acctgcatgc aaaggacaaa
    45661 acccagcatc ccgaaaacgt cgagctgctc agtgcgcaga agccgattac cgactttaag
    45721 ggcctgctga ccaccattat ttccgccgtc gtctgtttcg gcatttacca catcctgcct
    45781 tacagcccgg atgccaataa aggtatcgcg ttgctgattt tcgttgccgc actttggttt
    45841 accgaagccg tccacattac cgttaccgcg ctgatgatcc ctatcctcgc cgtcgtactc
    45901 ggtttccccg acatggacat caaaaaggcg atggctgatt tttccaaccc gattatctac
    45961 atttttttcg gcggcttcgc gcttgccacc gccctgcata tgcagcggct ggaccgtaaa
    46021 atcgccgtca gcctgttgcg cctgtcgcgc ggcaatatga aagtggcggt tttgatgttg
    46081 ttcctcgtta ccgcctttct gtccatgtgg atcagcaaca ccgccaccgc cgcgatgatg
    46141 ctgcctctag caatgggtat gctgagccac ctcgaccggg aaaaagaacg caaaacctac
    46201 gtcttcgtcc tgctcggcat cgcctattgc gccagcatcg gcggcttggg cacgctcgtc
    46261 ggctcgccgc ccaacctgat tgccgccaaa gccctaaatc tggacttcgt cggctggatg
    46321 aagctcggcc tgccgatgat gctgttgatt ctgcccttga tgctgctctc cctgtacgtc
    46381 atcctcaaac ctaatttgaa cgaacgcgtg gaaatcaaag ccgaatccat cccttggacg
    46441 ctgcaccgcg tgatcgcgct gttgattttc cttgccacag ccgccgcgtg gatattcagc
    46501 tccaaaatca aaaccgcctt cggcatttcc aatcccgaca ccgttatcgc cctgagtgcc
    46561 gccgtcgccg tcgtcgtctt cggcgtggcg caatggaagg aagtcgcccg caataccgac
    46621 tggggcgtgt tgatgctctt cggcggcggc atcagcctga gcacgctgtt gaaaacatcc
    46681 ggcgcgtccg aagccttggg acagcaggtt gccgccacct tttccggcgc gcccgcattt
    46741 ttggtgatac tcatcgtcgc cgccttcatt atttttctga ccgagttcac cagcaacacc
    46801 gcctccgccg cattgcttgt accgattttc tccggcatcg ctatgcagat ggggctgccc
    46861 gaacaagtct tggtattcgt catcggcatc ggcgcatctt gtgccttcat gctgccggtt
    46921 gccacaccgc ctaacgcgat tgtgttcggc acgggcttaa tcaagcaacg cgaaatgatg
    46981 aatgtcggca tactgctgaa catcctctgc gtagtattgg ttgctctgtg ggcttatgct
    47041 gtactgatgt aaaccatcga cctaaacaac aagaccgtct gaaagaatat ttttcagacg
    47101 accttgaagt ttgtcgttca gacacaattt gtcgaatcat tcaaaaccgg attctaacga
    47161 aaggaaaccc atgattatcc tgcacaccaa caaaggcgac atcaaaatcg aactcgattt
    47221 cgacaaagcc cctgttaccg ccaaaaactt cgagcaatac gtcaaagacg gcttctacga
    47281 cggcgtaatc ttccaccgcg tcatcaaagg cttcatgatt caaggcggcg gcatggatga
    47341 aaacatgaac gaaaaagaaa cccgcgatcc gattcaaaac gaagcgtcca acggcctgcc
    47401 caacgataaa tacaccatcg ccatggcacg cacttccgac ccccattccg ccagcgcgca
    47461 attcttcatc aacactgccg acaacgcttt cctgaacttc cgttctaaag agctgtacgg
    47521 caaaaccgtc gtccaagact ggggctatgc cgtattcggt aaagtcgttg acggttttga
    47581 cgttgtcgat gccatcgaag gcgtttctac caaacgtcat ggttaccacg acgacgtacc
    47641 gagcgaacct gtcgtcatca ttaaagccga agcggtataa accgacaatc cgaaagcagc
    47701 ctgcacaaag gctgctttta tttcagacgg catgttattt gatgtaaccg tgctatgccg
    47761 tctgaaaacc ggacgcaagc cttcagacgg cataccgcta tgttaaaata tgcccgtttt
    47821 tcctaaacgg acacaaagga aaccttatgg caagcatcgc ccgcgacatc ttcaaagcct
    47881 acgacatccg gggtattgtc ggcaaaaccc tgaccgacga agccgcctac cttatcggca
    47941 aagccatcgc cgccaaagcc gccgaaaaag gcattacccg catcgcgctc ggacgcgacg
    48001 gacgcttgag cggtcccgaa ctgatggaac acatccggcg cggctttacc gacagcggca
    48061 tcaatgtcct caatgtcggt atggttgcca ctcctatgct ctacttcgcc gccgtcaacg
    48121 aatgcggcgg cagcggcgtg atgattaccg gcagccacaa tccgcccgat tacaacggct
    48181 ttaaaatgat gctcggcggc gacacgcttg ccggcgaagc catccaagaa cttttgtcca
    48241 tcattgaaaa agacggtttt gctgccgccg gcaaacaagg cagcgtcacc gaaaaagaca
    48301 tctccggcga atacctcaaa cacattaccg gacacatcag gctcaaacgc ccgatgaaca
    48361 tcgccattga cgcgggcaac ggcgtgggcg gcgcgtttgc cggcaaactc tacaaaggct
    48421 tgggcaatga agttaccgag cttttctgcg acgtggacgg cactttcccc aaccaccatc
    48481 ccgacccatc caaaccgaaa aacctgcaag atttgattgc cgcgctgaaa aacggtgatg
    48541 ccgaaatcgg cttggcgttt gacggcgatg ccgaccgctt gggtgtggtc accaaagacg
    48601 gcaacattat ttatcccgac cgccaactga tgcttttcgc gcaagacgtg ttgagccgca
    48661 atcctaaagc caaagtgatt ttcgacgtca aatccacccg tctgcttgcg ccttggatta
    48721 aagaacacgg cggcgaacct gtgatggaaa aaaccggcca cagctttatc aaatccgcca
    48781 tgaaaaaaac cggcgcgccg gttgccggcg aaatgagcgg acacatcttc ttcaaagaac
    48841 gctggttcgg cttcgacgac ggtctgtacg ccggcgcacg cctcttggaa atcctgtctg
    48901 cctccgataa tccgtccgaa gtgttaaaca acctgccgca aagcatttcc acgcccgaac
    48961 tcaacatcgc cctgcccgaa ggcagcaacg gccatcaggt tatcgacgaa ctcgccgcca
    49021 aagccgaatt tgaaggcgca accgaaatca tcaccatcga cggtctgcgc gttgaatttc
    49081 ccgacggctt cggtctgatg cgtgcttcca ataccacgcc gattctggtg ttgcgttttg
    49141 aggcggatac gcaagaagcc atcgagcgga ttcaaaacca attcaaagcc gtcatcgaaa
    49201 gcaatccaaa tttaagctgg ccgctgtaaa catcgaaaaa atgccgtctg aaggcttcag
    49261 acggcatttt tcacaaatag ttaatcatat cttggtagat tggatttggc ttaaaaatct
    49321 ccgcgtccgt tcgtgtttgg ggtgatcgaa caactctttc gggctgcctt gttcgacaat
    49381 aacgccgccg tccatcacga caacggtagt cgccacttcc agcgcaaact tgatttcgtg
    49441 ggtcacgacg accatcgtcc aaccttcccg cgccaattcc ttcatggcgt tcaacacgtc
    49501 ttgcaccaat tcagggtcga gtgcggaagt gggttcgtca aacaacatca gctcgggctg
    49561 aatcgccaat gcgcgggcaa tgccgacgcg ctgctgctga ccgccggaaa gctggtaggg
    49621 atacaaatcc actttgtcgc ccaagccgac tttttccagc agtttcagag cctcttcgcg
    49681 cgcttgggcg gcaggcttgc cctgtacggc aaccggtcct tccattacgt tttccaaggc
    49741 ggttttgtgc ggaaagaggt tgtattgttg aaacaccatg cctgatttgc ggcgcagtgc
    49801 caaaatatca tgtttgcttg gttttttaga aaaatcgatt ttcagcggtc gctcgttgtc
    49861 gaactcgatt tgtccgtctt cgggcatttc caacgcgttt aggcagcgaa gaaacgttgt
    49921 tttacccgag ccggaaggcc cgaggatgac gaccacctgc cctttgccca catccaaatc
    49981 gatgccgcgc aaaatggtat ttttgccaaa ggtcttatgg atattgcgga ttttaatcat
    50041 gacaactcct tatttggcga catagcggtc gaaacgtttt tccaaacgcg cctgaatcaa
    50101 aaacagcact ttgcagaaac accaataaac caatgcggct tcgatataaa ccggcaagaa
    50161 gtcataagta cggtttgctg tctcttgagc gacacggaaa agctccgtta ccgttaccac
    50221 ggcggcaagc gaggtgtttt tgaacaagcc gataaattcg ttgctcaaag gcggtacggc
    50281 aacgcggaat gcttgcggcg cgacaatgcg gcggaaagtc tgcatatagg tcataccgat
    50341 ggagaaacct gcttcccatt ggcctttagg tacggacaaa attgccgcgc gtatggtttc
    50401 ggaagcatat gcgccgacat tgagcgaaaa gccgataatg gcggcaggaa tcggatcgat
    50461 atagatgccg acggaaggca aaccgtagaa tacgatgacc aactgcacca aaagcggcgt
    50521 accgcgaatg acggaaatat aaaattccac caatttcagc aggattttcc gcacgatgcc
    50581 gccggcgggc ataatccgca ccaaagccac ggctacggca atcaccatac cgatgacgaa
    50641 agaagctgcc gccaaaggca gagagaccgc gaagccggct ttgaccatag gcaaaaacgc
    50701 gctgacaatc atatcggcgc gtgtttccgt cataaacggc agagaggcaa ggaaattatt
    50761 gaacactgat gtcttttccg aagaattgtt cgcccagttt tttcagcgtg ccgtcggctt
    50821 tcagctcgtt gattgccgtg ctgaatttcg ccacggcttc gtcattgccc ttgttgacaa
    50881 tcaggccgga accgactttt tcatcggctg gcgcggacca aacgattttc acgccggcat
    50941 ttgggttttt cttcaggtaa tccaatactg ccaattcgtc gttcagggtt gcatcggcac
    51001 gtttttgttc aatcagggtc agcgattgtg ccaaaccatc aacagccacc aaatctgcgc
    51061 ctgcagcttt ggctttttcg ccgtaattgc tggtcaggga ttgcgcggtt ttcacgcctt
    51121 tgatgtcgtc gatagatttg atgttgctgt ctttacgggc caccaaaacc gcaccgctcc
    51181 agctgtaagg atcggatttg tcgaatgtcg cttggcgttc ggggctggtc agaccgactt
    51241 ggtttgccac cacgtcgaaa cgccccgcct tcaaacccgc catcatcgaa tcccattgcg
    51301 tttctttaaa ctcgactttc acgcccagtt tttccgccac ggcgcgggtt acttccacat
    51361 cgtaaccggt cagtttgccg tccttgtcgt ggtaggtaaa cggtgcgtaa gtgccttccg
    51421 tgccgacggt aaccgtgcct ttattgttga tgcgctcgat taaagaaccg gaaactgccg
    51481 attgtgcagg cgcggaagat gctccgctgc cgccttccga accgccgcag gccgccaaaa
    51541 ccaatgcggc aataccgccg agtacgaatt ttttcaacat cattctctcc tgtaaaaagt
    51601 gtgcaagtgc ggcattctaa gtgaaattgc ggcaaacaca aagaatcctt tttttatatg
    51661 gttattccaa atcggaatgg aaaagatatg ccgaagccgc cggaagcgga aataaagggg
    51721 gcgggaaagg cggcgggcgg cacgaaaccg aaaagcggca tcaggtatgc aaacggcgga
    51781 ttcacgcacg ccgttccggt aaaaatccgc ctgccgattc ggtgctataa tccatccgaa
    51841 acagatgaca ccaaaaagga acatctcatg aacacgcccc aatccgccat cattcccgac
    51901 cacgcccaag ccggcatctt tatcgaagcc gacttcgccg ccaaccgcct caacgatatt
    51961 aaagccgcct gccgcgcttc gctcgacgcg ttaactgcct tgaaagcccg ctttccggac
    52021 gatattttgg gtctgaccat cgccttcggc agcaaagcct gggcaacatt cggacatacg
    52081 gacgaaggca gtgaaatcaa acccttctcc gaaatgggca acgggcttgc gccgtctacg
    52141 cagcacgata tgtccatcca catccaatct ttccgccaaa acgccgccta cgcgcttgcc
    52201 caatccgttt tgggcgcatt cggcgacagc atatgcgtcg cgtccgaaga acacggtttg
    52261 cgcctgtatc aggatcgcgg gctggacggt ttcgtcgacg gcacggaaaa cccgcagggc
    52321 gatgaaaatg tccgcgaagt cgccatcatc cccgaaggaa aacccgatgc gggcggcagc
    52381 tatgtcctgc tgcaaaaata cctgcacgat ttgaaaaaat gggatgccgt ccccgtcgcc
    52441 gaacaggagg cctcggtcgg acgcggcaag gaaaccgacg acgaattcgg ccgcgatgtc
    52501 cgcctgcccg attcgcacct cggccgcgtc aacctgaaag aaaacggagt cggcctgaaa
    52561 atcgtccgcc gcagcctgcc cttcggcaaa atcagcggcg aacacggttt gatgtttacc
    52621 gcatactgcc gcacgctgca caatatcgaa gcgcaattat tgagtatgtt cggcgatacg
    52681 gacggcaaaa ccgacctgct gctccgacac ctctccgccg ccgtttcggg cggatactac
    52741 tacgcgccgt ctgtcgaacg cctgcaaaac ctctaagccg gacgatgccg tctgaaacca
    52801 tttttcagac ggcatttt
//
LOCUS       DAWKJW010000002        42471 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.002, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000002 DAWKJW010000000
VERSION     DAWKJW010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 42471)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42471)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42471
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.002"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..392
                     /gene="mafA"
                     /locus_tag="WJJ54_000051"
     CDS             <1..392
                     /gene="mafA"
                     /locus_tag="WJJ54_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HEZ7340980.1"
                     /translation="PPEYADTDVFVTVDVFGTVRSRTELHLYNAETLKAQTKLEYFAV
                     DRDSRKLLIAPKTAAYESQYQEQYALWMGPYSVGKTVKASDRLMVDFSDITPYGDTTA
                     QNRPDFKQNNGKNPDVGNEVIRRRKGG"
     gene            396..2159
                     /gene="mafB"
                     /locus_tag="WJJ54_000052"
     CDS             396..2159
                     /gene="mafB"
                     /locus_tag="WJJ54_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HEZ7340981.1"
                     /translation="MKPLRRLTNLLAACAVAAAAFGQPALAADLAQDPFITDNAQRQH
                     YEPGGKYHLFGDPRGSVSDRTGQINVIQDYTHQMGNLLIQQANINGTIGYHTRFSGHG
                     HEEHAPFDNHAADSASEEKGNVDDGFTVYRLNWEGHEHHPADAYDGPKGGNYPKPTGA
                     RDEYTYHVNGTARSIKLNPTDTRSIRQRISDNYNNLGSNFSDRADEANRKMFEHNAKL
                     DRWGNSMEFINGVAAGALNPFISAGEALGIGDILYGTRYAIDKAAMRNIAPLPAEGKF
                     AAIGGLGSVAGFEKNTREAVDRWIQENPNAAETVEAVFNVAAAAKVAKLAKAAKPGKA
                     AVSGDFSKSYTCSFHGSTLVKTADGYKAIAHIQAGDRVFAKDETSGKTGYKPVTARYG
                     NPYQETVYIEISDGIGNSQTLISNRIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQ
                     NITLKQQPLKAYNLTVADWHTYFVKGNQAETEGVWVHNDCPYGEKYRTEVGSYTNTHE
                     SGRTYSGKGTRQRSQISGAREARVNNDPHIATDFTPAKNNREAFKDESRRIDAHGGSK
                     STNNYNRIESPGKKYRKQDGD"
     gene            2162..2485
                     /locus_tag="WJJ54_000053"
     CDS             2162..2485
                     /locus_tag="WJJ54_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HEZ7340982.1"
                     /translation="MIVDEKSTSDVLKQYQELGFDLTKPMIIEFFIGGSQKNLQSIES
                     RLISYRQDFQISIEQDEFGEMWTCYCSVNIVPSLENILAIETTLFGIAQKNDCNYEGF
                     GSYGN"
     gene            2544..2771
                     /locus_tag="WJJ54_000054"
     CDS             2544..2771
                     /locus_tag="WJJ54_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7340983.1"
                     /translation="MEIKFNTLGVILNGVNPEEKFIKIIDDQENTGGFLILLSSNDKF
                     SSFDSYDDWVENLEILKEYLQESHWIIKWVG"
     gene            2898..3440
                     /locus_tag="WJJ54_000055"
     CDS             2898..3440
                     /locus_tag="WJJ54_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HEZ7340984.1"
                     /translation="MINHIEKYIGTISHGSKSDSGSQYKLNIAAIPSSPNRDLKTYIT
                     LGLSKHDLNYKSRFEILFVCSLKYDENQIFPFLRWLAETIIENKKILLRGQVVYLPRS
                     IVDSTKMDALYVSAPFYFDDDFQVCYGEHYNIVFPLLVPLYKQEAELVEKKGWNAFEQ
                     FLLDNEVGNLSDMNRKPFTW"
     gene            3574..4242
                     /locus_tag="WJJ54_000056"
     CDS             3574..4242
                     /locus_tag="WJJ54_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HEZ7340985.1"
                     /translation="MVKTADGYKAIARIRVGDRVFAKDEASGVTGYKPVTAQYGNPYQ
                     ETIYIKVSDDIGNSQTLISNRIHPFYSDGKWVKAEDLKAGNRLSSESGAEQTVQSITV
                     KPEPLQAYNLTVADWHTYFVKGNQAETEGVWVHNSCPPKRAPEYHAGTVSESNFLNAA
                     EKWLGENYKSYPNGRYVSQDGMRQVRYGYHETNSSTHHGHFESYDKPNGRVIENSAVT
                     IIRD"
     gene            4246..4518
                     /locus_tag="WJJ54_000057"
     CDS             4246..4518
                     /locus_tag="WJJ54_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7340986.1"
                     /translation="MMSVKELFKVILDENKDFPIRTIHRTPMGILPKPVALSIVQYEN
                     DPGFYLFYLDETGQEQTDTYHDTLDSAFEQAEFEFGISKEEWMQSP"
     gene            4639..5184
                     /locus_tag="WJJ54_000058"
     CDS             4639..5184
                     /locus_tag="WJJ54_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004463655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HEZ7340987.1"
                     /translation="MIIVEHLEHYLGEIESGIKCLDRRYHLSVSVFPSQPYKGVTTFS
                     TLGLNRYDLNYKSRFELIFTCSEEWNKENIAAFLSGVAEYLIDNRQPILRGEIIQLPR
                     VIIEGSKMDALYVSAPFYFDDDFQVCYGEHYNIVFPLLVPLYKQEAELVEKKGWNAFE
                     QFLLNNEVDNLSDMKRKPFVW"
     gene            5349..5948
                     /locus_tag="WJJ54_000059"
     CDS             5349..5948
                     /locus_tag="WJJ54_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HEZ7340988.1"
                     /translation="MAHIRVGESVLSKDEASGKTGYKPVTAQYGNPYQETVYIKVSDG
                     IGNSQTLISNRIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITFKQQPLKAYNL
                     TVADWHTYFVKGSQAETEGVWVHNACPPKRTGSSKNEKHGDGGRSQISAESRIAELKN
                     KIIPGMSKNERLKIERTIRNITKNANRKAKGEEHGRRGR"
     gene            5929..6168
                     /locus_tag="WJJ54_000060"
     CDS             5929..6168
                     /locus_tag="WJJ54_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7340989.1"
                     /translation="MVDAVVKTPEFLPFTSVGIFRFGADITEYKNILETFMYEPPDEF
                     RTEYYESPDSNLLISVKKKQNYFDILLSGAIFYGR"
     gene            6158..6385
                     /locus_tag="WJJ54_000061"
     CDS             6158..6385
                     /locus_tag="WJJ54_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7340990.1"
                     /translation="MGVNIIGLNFEDFKQLFHHPKSYGVDKYYLSNESYPTYVYEFDE
                     IGVQAWEAKGKIVTIIAGGKDNYSTEPYYDE"
     gene            6976..7311
                     /locus_tag="WJJ54_000062"
     CDS             6976..7311
                     /locus_tag="WJJ54_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7340991.1"
                     /translation="MMADKEQVEKMIYSENKQSVIDGMLGMTFSSEEDEIPWISEKLT
                     ELSKHKDLDIARLSLTCFGHLARMHENIGDCDKVIALLRSKQGNPDFQGFAEDALDDI
                     SFFIFKKRP"
     gene            7460..7954
                     /locus_tag="WJJ54_000063"
                     /pseudo
     CDS             7460..7954
                     /locus_tag="WJJ54_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233523.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8074..9207
                     /locus_tag="WJJ54_000064"
     CDS             8074..9207
                     /locus_tag="WJJ54_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7340992.1"
                     /translation="MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEVPE
                     NPNAFVAKLARLFRNADRAVVIVKESMRTEESLAGTADDGPLQSEKDYLALAIRLSRL
                     KEKAKWFHVTEQEHGEEVWLNYHIGEGGLVAVSLSQRSPEAFVNAEYLYRNDRPFSVN
                     VYGGTAHGENYETTGEYRVVWQPDGSVFDASGYGKIGEDVYEHCLGCYQMAQVYLAKY
                     RDVANDEQKVWDFREESNRIASDSRDSVFYQNMRELMPRGMKANSLVVGYDADGLPQK
                     VYWSFDNGKKRQSFEYYLKNGNLFIAQSSTVALKADGVTADIQTYHAQQTWYLDGGRI
                     IREEKQGDRLPDFPLNLENLEKEVRRYAEAAARRSGGRRDLSY"
     gene            complement(9294..9569)
                     /locus_tag="WJJ54_000065"
     CDS             complement(9294..9569)
                     /locus_tag="WJJ54_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7340993.1"
                     /translation="MNEGEVVLTPEQIQTLRGYAFRGDTYGGWRYLANLGDRYADDAA
                     AIVGKDANLNGLNLWMKKGVENLWDDTVGKKTRLMCISVFWIVVFNL"
     gene            complement(9586..10401)
                     /locus_tag="WJJ54_000066"
     CDS             complement(9586..10401)
                     /locus_tag="WJJ54_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FrpC operon protein"
                     /protein_id="HEZ7340994.1"
                     /translation="MRPYATTIYQLFILFIGSVFTMTSCEPVNEKTDQKAVSAQQAKE
                     QTSFNNPEPMTGFEHTVTFDFQGTKMVIPYGYLARYTQDNATKWLSDTPGQDAYSINL
                     IEISVYYKKTDQGWVLEPYNQQNKAHFIQFLRDGLDSVDDIVIRKDACSLSTTMGERL
                     LTYGVKKMPSAYPEYEAYEDKRHIPENPYFHEFYYIKKGENPAIITHRNNRINQTEED
                     NYSTGVGSCINGFPVRYYPFIREKQQLTQQELVGYHQQVEQLVQSFVNNSSKK"
     gene            complement(10447..10812)
                     /locus_tag="WJJ54_000067"
     CDS             complement(10447..10812)
                     /locus_tag="WJJ54_000067"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7340995.1"
                     /translation="MATIGTKQGARKTDVSTYRTAHKASPYESEGIYQYFLYANRKEY
                     DELFVGFVLINQYIFYTEVFFLIGIPSFMRMPAAHIKNGKIRWENTMGKYDGKIRWEN
                     TMGKYGTALDIAQYVNLKS"
     gene            complement(10845..11120)
                     /locus_tag="WJJ54_000068"
     CDS             complement(10845..11120)
                     /locus_tag="WJJ54_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ7340996.1"
                     /translation="MNASNWSVYLILCENSAFYCGISPNPQQRLAAHTTGKGAKYTRV
                     FKPVAMRIVAGGMDKGTALRQEIAVKKLTAAQKRQLWEQAEKMPSET"
     gene            complement(11117..12400)
                     /locus_tag="WJJ54_000069"
     CDS             complement(11117..12400)
                     /locus_tag="WJJ54_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ7340997.1"
                     /translation="MTASKSGFIGQIFSRNMLVCIFTGFTSGLPLYFLINLIPAWLRS
                     EQVDLKSIGLMALIGLPFTWKFLWSPLMDAVRLPVLGRRRGWMLLTQAGLLAALAAYA
                     FLNPRNHLPLIAGLSVLVAFFSASQDIVLDAFRREILSDEELGLGNSVHVNAYRIAAL
                     IPGSLSLVLADRMPWSEVFVITSLFMLPGLLMTLFLAREPVLPPAVPKTLKQTVVEPF
                     KEFFTRKGIASAVCVLLFIFLYKLGDSMATALATPFYLDMGFSKTDIGLIAKNAGLWP
                     AVAAGILGGVWMLKIGVNKALWLFGAVQAVTVLGFVWLAGFGPFDTVGTGERLMLAAV
                     IGAEAVGVGLGTAAFVSYMARETNPAFTATQLALFTSLSAVPRTVINSFAGYLIEWLG
                     YVPFFQLCFALALPGMLLLLKVAPWNGEKTQDAGR"
     gene            complement(12556..13974)
                     /gene="glnA"
                     /locus_tag="WJJ54_000070"
     CDS             complement(12556..13974)
                     /gene="glnA"
                     /locus_tag="WJJ54_000070"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEZ7340998.1"
                     /translation="MSIKNAVKLIEESEARFVDLRFTDTKGKQHHFTVPARIVLEDPE
                     EWFENGQAFDGSSIGGWKGIQASDMQLRPDASTAFVDPFYDDATVVLTCDVIDPADGQ
                     GYDRDPRSIARRAEAYLKSSGIGDTAYFGPEPEFFVFDGVEFETDMHKTRYEITSESG
                     AWASGLHMDGQNTGHRPAVKGGYAPVAPIDAGQDLRSAMVNILEELGIEVEVHHSEVG
                     TGSQMEIGTRFATLVKRADQTQDMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQ
                     SIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPT
                     KLAYSAKNRSASIRIPSVNSSKARRIEARFPDPTANPYLAFAALLMAGLDGIQNKIHP
                     GDPADKNLYDLPPEEDALVPTVCASLEEALAALKADHEFLLRGGVFSKDWIDSYIAFK
                     EEDVRRIRMAPHPLEFEMYYSL"
     gene            14285..15094
                     /gene="aroE"
                     /locus_tag="WJJ54_000071"
     CDS             14285..15094
                     /gene="aroE"
                     /locus_tag="WJJ54_000071"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEZ7340999.1"
                     /translation="MHALPRYAVFGNPVAHSKSPQIHQQFALQEGVDIEYERICADIG
                     GFVQAVSTFFETGGCGANVTVPFKQEAFHLADEHSERALAAGAVNTLILLKNGKLRGD
                     NTDGIGLANDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKGHRPARIVVANRTHAKA
                     EELARLFGIEAVPMADVNGGFDIIINGTSGGLSGQLPAVSPEIFLGCRLAYDMVYGDA
                     AQEFLNFAQSNGAAEVSDGLGMLVGQAAASYALWRGFTPDIRPVIEYMKAM"
     gene            15096..15797
                     /gene="mtgA"
                     /locus_tag="WJJ54_000072"
     CDS             15096..15797
                     /gene="mtgA"
                     /locus_tag="WJJ54_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HEZ7341000.1"
                     /translation="MFRIVKWLIALPVGIFIFFNAYVYGNIITYRAVAPHQTAFMSMR
                     MKQFEQEGRDVALDYRWMPYNRISVNLKKALIASEDARFAGHGGFDWGGIQNAIRRNR
                     NSGKVKAGGSTISQQLAKNLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSI
                     EWHYGVFGAEAASRYFYQIPAAKLTKQQAAKLTARVPAPLYYADHPKSKRLRNKTNIV
                     LRRMGSAELPESDTD"
     gene            complement(16122..16197)
                     /locus_tag="WJJ54_000073"
     tRNA            complement(16122..16197)
                     /locus_tag="WJJ54_000073"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(16162..16164),aa:Phe,seq:gaa)
     gene            complement(16388..17122)
                     /gene="lptB"
                     /locus_tag="WJJ54_000074"
     CDS             complement(16388..17122)
                     /gene="lptB"
                     /locus_tag="WJJ54_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEZ7341001.1"
                     /translation="MSANVSRLVVQNLQKSFKKRQVVKSFSLEIESGEVVGLLGPNGA
                     GKTTSFYMIVGLIAADAGSVMLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQN
                     IRAILEISTKDKSRIDGEVEKLLADLNIERLRNNPAPSLSGGERRRVEIARVLAMKPH
                     FILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGTV
                     LASGKPDDLVGNEQVRSVYLGKNFKY"
     gene            complement(17196..17726)
                     /gene="lptA"
                     /locus_tag="WJJ54_000075"
     CDS             complement(17196..17726)
                     /gene="lptA"
                     /locus_tag="WJJ54_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HEZ7341002.1"
                     /translation="MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQAN
                     QSTTFSGNVVIRQGTLNISAARVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQ
                     ANNVAYSSAGSTVVLTGNAKVQRGGDVAEGAVITYNTKTEVYTISGSTKSGAKSASKS
                     GRVSVVIQPSSTQKSE"
     gene            complement(17707..18288)
                     /gene="lptC"
                     /locus_tag="WJJ54_000076"
     CDS             complement(17707..18288)
                     /gene="lptC"
                     /locus_tag="WJJ54_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HEZ7341003.1"
                     /translation="MKVRWRYGIAFPLILAVALGSLSAWLGRISEVEIEEVRLNPDEP
                     QYTMDGLDGRRFDEQGYLKEHLSSKGAKQFPESSDIHFDSPHLVFFQEGRLLYEVGSD
                     EAVYHTENKQVLFKNNVVLTKTADGKRQAGKVEAEKLHVDTESQYAQTDTPVSFQYGA
                     SHGQAGGMTYDHKTGMLNFSSKVKATIYDTKDM"
     gene            complement(18285..18821)
                     /locus_tag="WJJ54_000077"
     CDS             complement(18285..18821)
                     /locus_tag="WJJ54_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ7341004.1"
                     /translation="MQAISPELQARAAKIKLLILDVDGVLTDGRIFIRDNGEEIKSFH
                     TLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQV
                     GVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCD
                     LIMQAQGTLGAALNEYIK"
     gene            complement(19039..20013)
                     /locus_tag="WJJ54_000078"
     CDS             complement(19039..20013)
                     /locus_tag="WJJ54_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEZ7341005.1"
                     /translation="MAENGKYLDWAREVLHTEAEGLREIAAELDENFVLAADALLHCK
                     GRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSG
                     ESDEIAAIIPALKRKNITLVCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTT
                     AVMALGDALAVVLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGT
                     PLKEAIVSMSEKGLGMLAVTDGQCRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHP
                     KTISAERLATEALKVMQANHVNGLLVTDADGVLIGALNMHDLLAARIV"
     gene            20109..21164
                     /gene="tal"
                     /locus_tag="WJJ54_000079"
     CDS             20109..21164
                     /gene="tal"
                     /locus_tag="WJJ54_000079"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEZ7341006.1"
                     /translation="MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNP
                     AIFQKAFAGDALYADEIAALKQQNLSPKQRYETMAVADVRAACGVCLAEHESTGGKTG
                     FVSLEVSPELSKDAQGTVEEARRLYAAIGCKNAMIKVPATDAGIDALEILVSDGISVN
                     LTLLFSRAQTLKAYAAYARGIAKRLAAGQSVAHIHVVASFFISRVDGALDTTLPDHLK
                     GKIAIALAKTAYQDWEQYFTAPKFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDSL
                     IGAHTVNTVPDATLKAFIDHGTAKATLTEGVDEARARLAEIAALGIDVETLAARLQED
                     GLKQFEEAFEKLLAPLV"
     gene            21306..21596
                     /locus_tag="WJJ54_000080"
     CDS             21306..21596
                     /locus_tag="WJJ54_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341007.1"
                     /translation="MAKALEIISPNEIYSDLIFKDPVPPHTIYTELMKLIGRNASNER
                     IADRAFDFFSSGLMDGSATEEQYNALYDLTLLEEPGMELNKDEIMALINSLK"
     gene            21613..22500
                     /gene="gluQRS"
                     /locus_tag="WJJ54_000081"
     CDS             21613..22500
                     /gene="gluQRS"
                     /locus_tag="WJJ54_000081"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HEZ7341008.1"
                     /translation="MYTGRFAPSPTGLLHIGSLLTAAASYADARSNGGKWLVRMEDLD
                     PPREMPGAASHILHTLEAFGFEWDGEVAYQSRRYALYEETLCRLKTAGLVYPCHCSRK
                     DWQAAAVHGADGFVYNGRCRNPQQRPAPQGKQPAWRIRVPDRDIGFSDGIVGGYAQNL
                     ARDIGDFVLLRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLGVPT
                     PQYAHLPLLTNAQGQKWSKQTLAPALDLNRREQLLRQVFRYLKLPEAPEADRPAELLD
                     WAVAHWDMDKVPKHVITTP"
     gene            complement(22570..23580)
                     /gene="dusA"
                     /locus_tag="WJJ54_000082"
     CDS             complement(22570..23580)
                     /gene="dusA"
                     /locus_tag="WJJ54_000082"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HEZ7341009.1"
                     /translation="MNDNTHTLPPRRLSVAPMLDWTDRHYRYLARQITRNTWLYSEMV
                     NAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPS
                     PRVQKGSFGACLMNEVGLVADCLNAMQDAVGIPVTVKHRIGVDRQTEYQTVADFVGTL
                     RDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPGLEIIINGGITTN
                     EAIAGHLQHVDGVMVGREAYHNPMVMREWDRLFYGDTRSPIEYADLVQCLYTYSQAQI
                     QAGRGTILRHIVRHSLGLMHGLKGARTWRRMLSDATLLKDNDGSLILEAWKEVERANT
                     RE"
     gene            complement(23611..24102)
                     /locus_tag="WJJ54_000083"
     CDS             complement(23611..24102)
                     /locus_tag="WJJ54_000083"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HEZ7341010.1"
                     /translation="MRAVIQKTVGAKVDVVSENGTETCGKIDGGFVVLLGVTHSDIEK
                     DARYVADKIAHLRVFEDEAGKLNLSLKDVGGSVLLVSQFTLYADAASGRRPSFSKAAP
                     AEQAKRLYLHTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKV
                     VPD"
     gene            complement(24176..24934)
                     /locus_tag="WJJ54_000084"
     CDS             complement(24176..24934)
                     /locus_tag="WJJ54_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ7341011.1"
                     /translation="MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADR
                     HAEQSQKPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEY
                     VRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKR
                     YPNDEQAFDGFIMAQQLPEPLASQFAAMNRGDVTRDPVKLGERYYLFKLSEVGKNPDA
                     QPFELVRNQLEQGLRQEKARLKIDAILEENGVKP"
     gene            complement(25005..25871)
                     /locus_tag="WJJ54_000085"
     CDS             complement(25005..25871)
                     /locus_tag="WJJ54_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ7341012.1"
                     /translation="MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFR
                     AENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDD
                     KKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEI
                     LTDKEENAKKAVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDLEQGVPPLYQ
                     AIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVG
                     ALLGKANIKPAK"
     gene            complement(25920..26198)
                     /locus_tag="WJJ54_000086"
     CDS             complement(25920..26198)
                     /locus_tag="WJJ54_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEZ7341013.1"
                     /translation="MPAVDLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLV
                     VSGRFEGVSRLNRQKTVKSLLKDLFSGGMIHALGIRAATPDEYFHTAD"
     gene            complement(26198..26488)
                     /locus_tag="WJJ54_000087"
     CDS             complement(26198..26488)
                     /locus_tag="WJJ54_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEZ7341014.1"
                     /translation="MEYFMLLATDGENVYEARMAARPEHLKRLETLKSEGRLLTAGPN
                     PLPEDSNRVSGSLIVAQFESLDAAEAWAEDDPYVHAGVYSEVLIKPFKAVFK"
     gene            complement(26491..27021)
                     /locus_tag="WJJ54_000088"
     CDS             complement(26491..27021)
                     /locus_tag="WJJ54_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HEZ7341015.1"
                     /translation="MKFVSDLLSVILFFATYTVTKNMIAATAVALVAGVVQAAFLYWK
                     YKKLDTMQWVGLVLIVIFGGATIVLGDSRFIMWKPSVLFWLGALFLWGSHLAGKNGLK
                     ASIGREIQLPDAVWAKLTYMWVGFLIFMGIANWFVFTRFESQWVNYKMFGSTALMLVF
                     FIIQGIYLSTCLKKED"
     gene            27330..29882
                     /locus_tag="WJJ54_000089"
     CDS             27330..29882
                     /locus_tag="WJJ54_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV family protein"
                     /protein_id="HEZ7341016.1"
                     /translation="MKNNRQIKLIAASVAVAASFQAHAGLGGLNIQSNLDEPFSGSIT
                     VTGEEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSEQAVRDPVLVFRIGAGAQV
                     REYTAILDPVGYSPKTKSALSDGKTHRKTAPTAESQENQNAKALRKTDKKDSANAAVK
                     PAYNGKTHTVRKGETVKQIAAAIRPKHLTLEQVADALLKANPNVSAHGRLRAGSVLHI
                     PNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAAPEAKAEKPAV
                     RPEPVPAANTAASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAEEETESGLF
                     DGLFGGSYTLLLAGGGAALIALLLLLRLAQSKRARRTEESVPEEEPDLDDAADDGIEI
                     TFAEVETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDFDSLA
                     AAQNGILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESV
                     AQTAENKPETVDTDFSDNLPSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTV
                     AEVQTPEELHDFLKVYETDAVAETAPETPDFNAAADDLSALLQPAEAPSVEENVTETV
                     AETPDFNATADDLSALLQPSEVPAVEENAAEIVADDLSALLQPAEAPAVEENVTETVA
                     ETSDFHTAADDLSALLQPAEAPAVEENVTKTVAEIPDFNATADDLSALLQPSEVPAVE
                     ENAAEITLETPDSNTSEADALPDFLKDGEEETVDWSIYLSEENIPNNADTGFPSESVG
                     SDAPSEAKYDLAEMYLEIGDRDAAAETVQKLLEEAEGDVLKRAQALAQELGI"
     gene            complement(30055..30531)
                     /gene="gloA"
                     /locus_tag="WJJ54_000090"
     CDS             complement(30055..30531)
                     /gene="gloA"
                     /locus_tag="WJJ54_000090"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HEZ7341017.1"
                     /translation="MADVYAKQNRSLTTTERNTKMRLLHTMLRVGNLEKSLDFYQNVL
                     GMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDA
                     YEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQKKSGDDSVAYQTA"
     gene            complement(30495..31664)
                     /gene="lapB"
                     /locus_tag="WJJ54_000091"
     CDS             complement(30495..31664)
                     /gene="lapB"
                     /locus_tag="WJJ54_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HEZ7341018.1"
                     /translation="MDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGF
                     YKSLDALVDRNSGRAARELAEVIDQQPQSYDLNLTLGKLYRQRGENDKAINIHRTMLD
                     SPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRD
                     WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTR
                     ANMILGDIEHRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLT
                     GYMQTFPELDLINVVYEKSLLLKCEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDP
                     AWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV"
     gene            complement(31675..31989)
                     /locus_tag="WJJ54_000092"
     CDS             complement(31675..31989)
                     /locus_tag="WJJ54_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1049 domain-containing protein"
                     /protein_id="HEZ7341019.1"
                     /translation="MKLIYTVIKIIILLLFLLLAVINTDAVTFSYLPGQKFDLPLIVV
                     LFGAFVVGIVFGMFALFGRLLSLRGENGRLRAEVKKNARLTGKELTAPPAQNAPESAK
                     QP"
     gene            32299..33297
                     /gene="ilvE"
                     /locus_tag="WJJ54_000093"
     CDS             32299..33297
                     /gene="ilvE"
                     /locus_tag="WJJ54_000093"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HEZ7341020.1"
                     /translation="MSRPVPAVFGSVFHSQMPVLAYREGKWQPTEWQSSQDLSLVPGA
                     HALHYGSECFEGLKAFRQADGKIVLFRPTANIARMRQSADILHLPRPETQAYLDALVE
                     LVKRAADEIPDAPAALYLRPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKVGSPV
                     KILVETEHIRCAPHMGRVKCGGNYASAMHWVLKAKAEYGANQVLFCPNGDVQETGASN
                     FILINGDEIITKPLTDEFLHGVTRDSVLTVAKDLGYTVSERNFTVDELKAAVENGAEA
                     ILTGTAAVISPVTSFVIGGKEIEVKSQERGYAIRKAITDIQYGLAEDKYGWLVEVC"
     gene            complement(33541..34326)
                     /gene="fabI"
                     /locus_tag="WJJ54_000094"
     CDS             complement(33541..34326)
                     /gene="fabI"
                     /locus_tag="WJJ54_000094"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEZ7341021.1"
                     /translation="MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL
                     EERVRKMAAELDSELVFRCDVASDDEINQVFVDLGKHWDGLDGLVHSIGFAPKEALSG
                     DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM
                     GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR
                     RNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALSTEG"
     gene            complement(34481..35302)
                     /gene="dapD"
                     /locus_tag="WJJ54_000095"
     CDS             complement(34481..35302)
                     /gene="dapD"
                     /locus_tag="WJJ54_000095"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HEZ7341022.1"
                     /translation="MSLQNIIETAFENRADITPTTVTPEVKEAVLETIRQLDSGKLRV
                     AERLGVGEWKVNEWAKKAVLLSFRIQDNEVLNDGVNKYFDKVPTKFADWSEDEFKNAG
                     FRAVPGAVARRGSFVAKNVVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQAAPTIIEDNCFIGARSEIVEGVIVEEGSVISMGVFIGQSTKIFDRT
                     TGEIYQGRVPTGSVVVSGSMPSKDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI"
     gene            complement(35512..37155)
                     /gene="pgi"
                     /locus_tag="WJJ54_000096"
     CDS             complement(35512..37155)
                     /gene="pgi"
                     /locus_tag="WJJ54_000096"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEZ7341023.1"
                     /translation="MNAFTRAWHALERHYQDTRHVLLRDRFACEPDRFERMHERLDGM
                     LFDYSKNRLGEDTLQLLCNLADAADLEGKMRALRTGAKVNGSEGRAALHTALRLPDGA
                     DAVYVDGRDVLPEIRRELNRALEFAHSLDDGSYQGITGKRITDFVHIGIGGSDLGPAM
                     CVQALEPFRRHIAVHFAANADPACLDAVLCRLNPETTVFCVASKSFKTPETLLNAQAV
                     KAWYRGAGFSESETACHFCAVSADTAAAAAFGIAAERVFAMYDWVGGRYSVWSSVGLP
                     VMVAVGGARFRELLAGAHAMDSHFFHTPPRRNIPVLMALIAVWYNNFQHADGQTAVPY
                     SHNLRLLPVWLNQLDMESLGKSRASDGSPAVCKTGGIVFGGEGVNCQHAYFQLLHQGT
                     RLIPCDFIVPMTAQGVEDGRSRFTVANAFAQAEALMKGKTLDEARAELADLPEAERER
                     LAPHKEFPGNRPSNSILLDRLTPYNLGMLMAAYEHKTFVQGAIWNVNPFDQWGVEYGK
                     QLAKTIIGELEGGTSVHDASTEGLMAFYRECRLKGGGAA"
     gene            37665..38897
                     /gene="pilG"
                     /locus_tag="WJJ54_000097"
     CDS             37665..38897
                     /gene="pilG"
                     /locus_tag="WJJ54_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4 pilus assembly protein PilG"
                     /protein_id="HEZ7341024.1"
                     /translation="MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARK
                     KLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLSTMIKAGLPLMQAFEIVARGHGN
                     PSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
                     KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPPLTQTV
                     MDMSDFFVSYGWMVLIALGFAIYGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTI
                     ARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRVIQGLSMTSGMRATE
                     LFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIG
                     TLLVAMYLPLFNLGNVVA"
     gene            38971..39831
                     /locus_tag="WJJ54_000098"
     CDS             38971..39831
                     /locus_tag="WJJ54_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEZ7341025.1"
                     /translation="MSDLSVLSPFAVPLAAVFGLLVGSFLNVVIYRVPVMMERGWTVF
                     AKEYLNLPLTEEESRTFNLMKPDSCCPKCRVPIRARQNIPIVSYLLLRGKCASCQTKI
                     SIRYPLIELLTGVLFGLVAWQYGWSWITLGGLILTAFLISLTFIDADTQYLPDSMTLS
                     LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSLWLLCAVYKLLTRKTGMGNGDFKLIAAL
                     GAWLGISALPVLIFVSSLIGLVAAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRA
                     VNWWLTHPVL"
     gene            39833..40465
                     /locus_tag="WJJ54_000099"
     CDS             39833..40465
                     /locus_tag="WJJ54_000099"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEZ7341026.1"
                     /translation="MTVWVGLTGGIGSGKSAAAQCFADLGVPRIDADAAAHSLTASDG
                     IALPEIRRLFGDTVFDTQGLLRRDILRKEVFASPSRKALLESVMLPLIFSEIKKQQET
                     FNDAPYGIIEIPLLTEKRQFMKLIQRVLTISAPVEKRIGRVMARSGLTRGEVAAVISH
                     QASESERLLLADDVLLNDGSLKSLRDKTMRLHAFYSGIFASKPTQGKHNG"
     gene            40458..40667
                     /locus_tag="WJJ54_000100"
     CDS             40458..40667
                     /locus_tag="WJJ54_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HEZ7341027.1"
                     /translation="MAESRQTRLQVKCPTCQTAVVWKPENAFRPFCSQRCKLIDLGGW
                     ADGKYTVSSQTESLPEISEPDMAYR"
     gene            complement(40752..42428)
                     /gene="pilB"
                     /locus_tag="WJJ54_000101"
     CDS             complement(40752..42428)
                     /gene="pilB"
                     /locus_tag="WJJ54_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HEZ7341028.1"
                     /translation="MSVGLLRILVQNQVVTVEQAEHYYNESQAGKEVLPMLFSDGVIS
                     PKSLAALIARVFSYSILDLRHYPRHRVLMGVLTEEQMVEFHCVPVFRRGDKVFFAVSD
                     PTQMPQIQKTVSAAGIEVELVIVEDDQLAGLLDWVGSRSTSLLQELGEGQEEEESHTL
                     YIDNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPI
                     AVRGQLASRIKVMSRLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMR
                     ILNSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNT
                     ESVNIATAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETA
                     DIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSS
                     CKQEVERPSASALKEVGFTDEDLAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEE
                     MQRVIMNNGTEVDILDVAYKEGMVDLRRAGILKVMQGITSLEEVTANTND"
BASE COUNT        10728 a        11204 c        10510 g        10029 t
ORIGIN      
        1 taccgcccga atacgccgac accgacgtat tcgtaaccgt cgacgtattc ggcaccgtcc
       61 gcagccgcac cgaactgcac ctctacaacg ccgaaaccct taaagcccaa accaagctcg
      121 aatatttcgc cgttgaccgc gacagccgga aactgctgat tgcccctaaa accgccgcct
      181 acgaatccca ataccaagaa caatacgccc tctggatggg accttacagc gtcggcaaaa
      241 ccgtcaaagc ctcagaccgc ctgatggtcg atttctccga catcaccccc tacggtgaca
      301 caaccgccca aaaccgtccc gacttcaaac aaaacaacgg taaaaacccc gatgtcggca
      361 acgaagtcat ccgccgccgc aaaggaggat aaaccgtgaa accgctgcgc agactgacaa
      421 acctccttgc cgcctgcgcc gtagcggccg ccgccttcgg acagcccgcc ctcgcggcgg
      481 acttggcgca agatccgttc attaccgata acgcccaacg gcagcactac gaacccggag
      541 gcaaatacca cctcttcggc gacccgcgcg gcagcgtttc cgaccgcacc ggtcaaatca
      601 acgtcatcca agactatacc caccagatgg gcaacctgct catccaacag gcaaacatca
      661 acggcacaat cggctaccac acccgctttt ccggacacgg acacgaagaa cacgccccct
      721 tcgacaacca cgccgccgac agcgcaagcg aagaaaaagg caacgttgac gacggcttta
      781 ccgtgtaccg gctcaactgg gaaggacacg aacatcatcc cgccgatgcc tacgacggcc
      841 cgaagggcgg caattacccc aaacctacgg gcgcacgaga cgaatacacc tatcacgtca
      901 acggcacagc ccgcagcatc aaactcaatc cgaccgacac ccgcagcatc cggcaacgca
      961 tatccgacaa ctacaacaac ctcggcagca atttctccga ccgcgccgat gaagccaaca
     1021 gaaaaatgtt cgagcacaat gccaagctcg accgctgggg caacagcatg gagtttatca
     1081 acggcgtcgc cgccggcgcg ctcaacccct ttatcagcgc gggcgaagcc ttgggcatag
     1141 gcgacatact gtacggaacg cgctatgcca tagacaaagc cgcaatgcgc aacatcgccc
     1201 ccttacccgc cgagggcaaa ttcgccgcca tcggcggctt gggcagcgtg gcgggctttg
     1261 aaaagaatac gcgtgaagcc gttgaccggt ggatacagga aaaccccaat gccgccgaaa
     1321 ccgtcgaagc cgtcttcaac gttgccgcag cagccaaagt cgcgaagctg gcaaaggcgg
     1381 cgaaaccggg gaaagctgcg gttagcgggg atttctcaaa atcctacacc tgctccttcc
     1441 acggcagtac cttggtcaaa acggcagacg gctacaaagc cattgcccat attcaagccg
     1501 gcgaccgcgt cttcgccaaa gatgaaacca gtggaaaaac tggatacaaa cctgttaccg
     1561 cccgatacgg caatccgtac caggaaaccg tttacattga aatttcagac ggcatcggta
     1621 acagccaaac cctgatttcc aaccgcatcc atccgtttta cagtcaagga aaatggatac
     1681 aggcaggtcg tctgaaaaaa ggcgacaccc tgctttccga aagcggtgca aaacagacgg
     1741 ttcaaaacat tactctcaaa cagcagccgc tcaaagccta caacctgacc gttgccgact
     1801 ggcatactta tttcgtcaag ggtaatcagg cggaaacgga aggggtttgg gttcataatg
     1861 attgtccgta tggagaaaaa tataggacag aagttggttc ttatactaat actcatgaaa
     1921 gtggtcgaac ttattctgga aagggcacaa gacaacgttc ccaaatctct ggagcaagag
     1981 aagctagggt taataatgac cctcatatag ctacagattt tactcctgcc aaaaataatc
     2041 gagaggcatt caaagatgaa tctagaagaa ttgacgctca cggtggttcc aaaagtacca
     2101 ataattacaa tcgaattgaa agcccgggga aaaaataccg aaaacaagat ggagattaaa
     2161 aatgattgtt gacgaaaaat ctacttcaga tgtactgaaa caatatcaag aactagggtt
     2221 tgatttgaca aaacctatga taatagagtt ttttatagga ggttctcaaa agaatctgca
     2281 atcaatagaa agccgactca tttcttatcg gcaagatttt caaatcagta ttgaacaaga
     2341 tgaattcgga gaaatgtgga cttgctattg ttccgtcaat atcgtccctt cccttgaaaa
     2401 cattttagct attgaaacta cgttatttgg tattgcacaa aaaaatgatt gtaattatga
     2461 aggttttggt tcgtatggga actaacaaaa agtgtaggtt gggttgaaaa aactatattc
     2521 ccattaaaga ttaggggatg tctatggaaa taaaattcaa tactttgggg gttatcctga
     2581 atggggtcaa tcctgaagaa aaattcataa aaattattga tgaccaggaa aataccggtg
     2641 gatttctgat actgttatct tcaaatgaca aattttcatc gtttgacagt tacgatgact
     2701 gggtcgaaaa cttagaaata ttaaaagaat acctgcaaga atctcattgg ataataaagt
     2761 gggtcggata gtcggcaaac gtagtccgtc tgaaacgctt ttacttttca gacggacttt
     2821 ctatcaatgg gaacaaggcg ttttgtctca atctggtcta tgattattcg atacagtgat
     2881 gggaagctaa gaaaaatatg attaatcata ttgaaaaata tataggcact atttctcatg
     2941 gctcgaaaag cgattcggga agtcagtaca aattaaatat cgcagctatt ccctcttccc
     3001 ctaacaggga tttaaaaact tatattactt tagggttaag caaacatgat ctgaattata
     3061 aaagcagatt tgaaatactt ttcgtatgtt ctttaaaata tgatgaaaat cagattttcc
     3121 catttttaag atggttggca gaaaccatca ttgagaacaa aaaaatcctt cttcgggggc
     3181 aggttgttta tttgcccaga agcattgttg attcaacaaa aatggatgca ctgtatgttt
     3241 ccgccccatt ttatttcgac gatgattttc aggtctgtta tggcgaacac tacaatatcg
     3301 ttttcccttt gcttgtcccc ttgtataaac aggaagccga attggtggaa aagaaaggtt
     3361 ggaatgcttt tgagcagttc ttgttggata atgaagttgg caacctttcg gatatgaatc
     3421 ggaaaccgtt tacttggtaa ggattttctt aaatttgatt aaaggtcgtc tgaaaccgtg
     3481 tttaactttc agacaacctt tccttcattt gaaacaggat attgaaaact aagtttttca
     3541 acattctaca cctgctcctt ccacggcaac accttggtta aaacggcaga cggctacaaa
     3601 gctattgccc gtatccgggt cggcgaccgt gtcttcgcca aggacgaggc aagcggagta
     3661 acgggataca aacctgttac cgcccaatac ggcaatccgt atcaggaaac catttacatt
     3721 aaagtttcag acgacatcgg caacagccaa accctgattt ccaaccgcat ccacccattt
     3781 tattcggacg gcaaatgggt taaagcagag gatttgaaag cgggaaacag gttgtcgtct
     3841 gaaagcggcg cggaacagac ggttcaaagc attaccgtca aaccggaacc gctgcaagcc
     3901 tacaatctga ccgttgccga ttggcatacc tacttcgtca agggcaatca ggcggaaacg
     3961 gaaggggtgt gggttcataa ttcttgtcct cccaaaagag ctcccgaata ccatgcagga
     4021 actgtatctg aatctaattt tttaaatgca gctgagaaat ggctagggga aaactataag
     4081 tcatatccaa atggtcgata tgtatcacaa gatggaatgc ggcaggtacg atatggttat
     4141 catgaaacaa attcatctac gcatcatggt cattttgaat catatgacaa acctaatgga
     4201 cgtgtaatag aaaatagtgc ggtaacaatt attcgggatt gaagaatgat gagtgtaaaa
     4261 gaattattca aagtcatctt agatgaaaat aaagattttc ctattagaac gattcatcgt
     4321 accccgatgg gaatacttcc caaacctgtt gctttaagta ttgttcaata tgaaaatgac
     4381 ccgggatttt atttgtttta tttggatgag accggtcagg aacaaacgga tacttatcat
     4441 gacacattag attcggcatt tgaacaggct gaatttgaat ttggaatcag caaagaggaa
     4501 tggatgcaaa gtccttagac ggcaaaatca agatgccgct ttatttttca gacggcattt
     4561 ccgtcaataa aaaagtcggt attggagccc aaaacagcct acgtcttgcc gggataggga
     4621 tgaaatcttt aagaaaaaat gattatagtt gaacatttag aacattattt gggtgaaatc
     4681 gaaagcggta taaaatgctt ggatcgacgt tatcatctca gcgtttccgt cttcccatca
     4741 caaccatata aaggggtaac tactttttct actttaggct tgaatcgata tgacttgaac
     4801 tataagagta ggtttgaatt aatttttacc tgttctgaag aatggaataa agaaaatatt
     4861 gcagcttttc tatcaggagt ggctgaatat ttgattgaca atagacaacc tattttaaga
     4921 ggtgaaatta ttcaattacc cagggtaatt atcgaaggta gcaaaatgga tgcactgtat
     4981 gtttccgccc cattttattt cgacgatgat tttcaggtct gttatggcga acactacaat
     5041 atcgttttcc ctttgcttgt cccgttgtat aaacaggaag cagaattggt agaaaagaaa
     5101 ggttggaatg cttttgagca gttcttgctg aataatgaag ttgacaacct ttcggatatg
     5161 aagcggaaac cgtttgtttg gtaagggctt tcttaaattt gattaaaggt cgtctgaaac
     5221 cgtgtttaac tttcagacaa cctttccttc atttgaaaca ggatattggg aactaagttc
     5281 ttcaaaaatc ctgtctccgt cccttatacg tcggtgcttt agtcaaaacg gcagacggct
     5341 acaaagctat tgcccatatc cgagtcggcg agagcgtcct ttccaaggac gaggcaagcg
     5401 ggaaaacagg atacaaaccc gttaccgccc aatacggtaa tccgtatcaa gaaaccgttt
     5461 acattaaagt ttcagacggc atcggcaaca gccaaaccct gatttccaac cgcatccatc
     5521 cgttttacag tcaaggaaaa tggatacagg caggtcgtct gaaaaaaggc gacaccctgc
     5581 tttccgaaag cggcgcaaaa cagacggttc aaaacattac cttcaaacag cagccgctca
     5641 aagcctacaa tctgaccgtt gccgattggc atacttactt cgtcaagggc agtcaggcgg
     5701 aaacggaagg ggtttgggtt cataatgcgt gtccgcctaa aaggacagga agctccaaga
     5761 atgaaaaaca tggagatggc ggtcgaagtc aaatatcagc agaatcacga attgctgaat
     5821 taaaaaataa aattattccc ggaatgtcca aaaatgaacg attaaagatt gagcgaacaa
     5881 tcagaaatat tacaaaaaat gccaatcgaa aagcaaaagg agaagagcat ggtcgacgcg
     5941 gtcgttaaaa ctcccgaatt tttacctttt acttctgtag gaatattccg ttttggtgcg
     6001 gatataacag agtacaaaaa catactggaa acttttatgt atgaacctcc tgatgagttt
     6061 agaacagaat attatgaatc tcccgactca aatttactca tttccgtcaa aaaaaaacaa
     6121 aattatttcg atattttgtt atcaggagct atattttatg ggcgttaata taataggtct
     6181 gaattttgaa gattttaaac aacttttcca tcaccctaaa tcatacggtg ttgataaata
     6241 ttatttatca aatgaatctt atccgacata tgtctatgag tttgatgaaa taggagtaca
     6301 agcttgggaa gcaaaaggga aaattgttac tatcattgcc gggggcaaag acaattattc
     6361 gacagaacct tactacgatg aataacatta atggcaggca taggttgggt tgagaactca
     6421 acaacaagag gtcgtctgaa accgtaatcg atttttcaga cgacctttct gtcaatccaa
     6481 acagattgtc gaatcttaat ccaacctgtg cttgctgtac ggaacaggca cggtgttcat
     6541 tcacaagtta agtcatatat tgaatcaaaa ggcggcattg ttaaaacagg tttaggagat
     6601 taaacatggc atcatatgtt tccataaaag gatggattga atgctctgac gatgatataa
     6661 aaatcatcca agaaaacatt aataattttt ggaataattg tcccttcaat atcgaagaga
     6721 aagaatctgc aaaaatatat aaaagtgggt gggttttccc gacaaatagt tttaattgga
     6781 gcagctatat ttttttggtg catgcgtaaa atcttatttc attatttatt ttgaaaaatg
     6841 tattaaaaca ataatggaat tggatattga aatatcaggt ttttttgaat tagattatta
     6901 tgaagatagt tataaagtaa attggaaaat aaataatggc aatttaatac aaacgactaa
     6961 ttaaatggac aaaaaatgat ggctgataag gaacaagtag aaaagatgat ttattctgaa
     7021 aataaacaga gtgttattga cggtatgctc ggtatgacct tcagctcgga ggaggatgaa
     7081 atcccttgga tttctgagaa attgacggag ttgtcgaagc ataaagactt ggatattgcc
     7141 agattgtcat taacctgttt cggacatctt gccaggatgc atgaaaatat cggcgattgc
     7201 gataaagtga ttgctttatt gcgctcaaaa caaggtaatc cggattttca aggttttgcc
     7261 gaagatgcgt tagacgatat ttccttcttt atatttaaaa agcgtccgta agcaccggca
     7321 aggtcaaatc tggcaaatgc cgtctgaagc ggtattcggc tttcagacgg cattttctcc
     7381 gattggcaca ggatgcaggg gcttgccggc ttgattttgc cgaagttgtt ggcaaacaat
     7441 ttggaggggg cggcaattta tggaaaatag atttgcaaaa atcgttaagg atatttttag
     7501 ttttacccaa tttgtttccg aagcggaaaa taaaattcct aaccaatcct cccgttatta
     7561 cgactgctgg taggaattgg aaatcttgaa tgcttccgca ttggaagatt gggaaatatc
     7621 ggaaaagcct gaaaaatggg agaaatggac agaaaaatat cagaccgaag cgttacagtt
     7681 agtcaagaat ctatttgccg aagaagttcc tgaaaataat atagtttgcg atatttctca
     7741 ttttttgcat tttgccaatc gggcagaagc cgacattccc aatcaatcac gtttatatgc
     7801 cgaatattgg tgggaaatgg aaacgttcaa aatgtcggtt ttagaagatt gggaacgctc
     7861 gggaaagccg ttagattggg aaaaatggca aaggcaatat caatttgaag catttgaatt
     7921 agtcaaaaaa ttgaatcaaa gcaaacaaga gtaacaagct gcagcctgca taggggtttt
     7981 taaagtacgg catcaaccgt agattaaatt aaaaatcaaa caatcaaagc tcgtctgata
     8041 taatcgatat actctgttaa acgaaaaata aatatgttta aaaaattcaa accggtactg
     8101 ttgtcatttt ttgcacttgt atttgccttt tggctgggaa caggtattgc ctatgagatt
     8161 aatccgcgtt ggtttttgag cgatacggca actgaagtac ctgaaaatcc gaatgctttt
     8221 gtggcgaaac ttgcccgcct gttccgaaat gccgacaggg cggttgtcat cgtgaaggaa
     8281 tcgatgagga cggaggaaag tcttgccgga actgcggatg acggtccgtt gcagtcggag
     8341 aaggattatc tcgcgctcgc tatccggctc agtcgtttga aagaaaaggc gaaatggttt
     8401 cacgtaacgg agcaggaaca tggggaagag gtctggctga attaccatat cggcgagggc
     8461 ggtttggttg cggtttcgct ttcgcaacgc tcgccggaag cgtttgttaa tgccgaatat
     8521 ctgtatcgga acgatcgtcc gttttctgta aatgtgtacg gcggaacggc tcacggagaa
     8581 aattatgaaa cgacaggaga atatcgggtt gtttggcaac cggacggttc ggtatttgat
     8641 gcgtcggggt acgggaaaat cggggaagat gtttatgagc attgcctcgg gtgttatcag
     8701 atggcccagg tatatttggc gaaataccgg gatgtcgcga atgatgagca gaaggtttgg
     8761 gacttccgcg aagagagcaa ccggattgcg tcggactcgc gcgattctgt gttttatcag
     8821 aatatgcggg aattgatgcc ccgggggatg aaggcgaaca gtcttgtggt cggctatgat
     8881 gcggacggtc tgccgcagaa agtctattgg agtttcgaca atggaaaaaa acgccagagt
     8941 ttcgaatatt atttgaaaaa cggaaatctt tttattgcac aatcttcgac ggtagcattg
     9001 aaagcggatg gcgtaacggc ggatatacag acctatcatg cgcaacagac gtggtatttg
     9061 gatggcgggc ggattatccg cgaagagaaa cagggagaca gactgcctga ttttcctttg
     9121 aacttggaaa atttggaaaa agaggtgcgc cgttatgcag aggctgcggc gagacgttcg
     9181 ggcggcaggc gcgacctttc ttactgaacg ccaatgccgt ctgaaaccgg ttttcagacg
     9241 gcattggaga gtcaaacgct ttttgcaatg ctgtatattc caaatccaat tcgctataaa
     9301 ttgaaaacca caatccaaaa aacagaaata cacattaaac gggtcttttt accgaccgta
     9361 tcatcccata ggttttccac accttttttc atccataaat tcaaaccatt taagtttgca
     9421 tccttaccga caattgcagc agcatcatcc gcataacggt cacccaaatt agccaaataa
     9481 cgccaaccgc cataggtatc gccacggaaa gcataaccac gcaaggtttg gatttgttct
     9541 ggtgttaaaa caacttcacc ctcattcata ataagatcct ttaaattatt ttttacttga
     9601 attgtttaca aaactctgta ccaattgctc tacttgttgg tgataaccta ccaactcctg
     9661 ctgtgtgagc tgctgctttt cccgaataaa cgggtaatac cgtaccggga aaccgttaat
     9721 acaggaacct acgccagtgc tgtaattatc ttcttcagtt tggtttattc gattattccg
     9781 atgagtaata atcgccggat tttctccttt tttaatatag taaaattcat gaaaatatgg
     9841 attttcagga atatgtcttt tatcttcata agcctcgtat tcaggatagg cagatggcat
     9901 ttttttaacc ccgtaagtaa gcaatctttc tcccatagtc gtgcttaaac tacacgcatc
     9961 ttttcggata acaatatcgt ccacgctatc caaaccgtcg cgtagaaatt ggataaagtg
    10021 tgctttgttt tgctggttgt atggctcaag aacccaacct tggtcggttt ttttgtaata
    10081 gacgctaatc tctatcaaat taatggagta agcatcctgc ccgggcgtgt cggaaagcca
    10141 ttttgtggca ttgtcttgcg tataccgtgc aagatagcca taggggataa ccattttggt
    10201 gccctgaaaa tcaaatgtaa ccgtatgttc aaatcctgtc attggctcgg gattgttgaa
    10261 actggtttgt tctttagcct gttgcgcact tactgctttt tgatctgtct tttcattcac
    10321 aggttcacat gaggtcatag taaaaacact cccaataaac aaaataaaaa gttgataaat
    10381 ggtagtagca tatggtctca taatttcaag cctagaaatt agttaaagaa tatattatgg
    10441 tagatactaa ctctttaagt tgacatattg tgcgatatcg agggctgtac cgtattttcc
    10501 catcgtattt tcccatcgta ttttcccatc gtattttccc atcgtatttt cccatcgtat
    10561 tttcccgttc tttatatgag cggcaggcat tctcataaaa gaagggatac cgataaggaa
    10621 aaatacctcg gtataaaaaa tatactgatt gattaataca aatccaacaa acagttcatc
    10681 gtattctttt ctgttggcgt ataaaaaata ctgatatatg ccttcacttt catagggcga
    10741 cgctttatgt gccgtcctgt acgttgaaac atcggttttc cttgccccct gctttgtccc
    10801 gattgttgcc aactgctgta accataccgt ccgaacctaa accgtcaggt ttcagacggc
    10861 attttttctg cctgctccca caattgccgt ttttgtgcgg cggtcagttt tttgacggcg
    10921 atttcctgcc tgagtgccgt gcctttatcc atcccgcctg caacgatacg catcgccacc
    10981 ggtttgaata cgcgggtata tttcgcgcct ttaccggttg tgtgggcggc aagccgctgt
    11041 tgcggattcg ggctgatgcc gcaatagaac gcgctgtttt cacacaatat caggtaaacg
    11101 ctccagtttg acgcgttcat ctgcctgcat cctgagtttt ctccccgttc caaggcgcaa
    11161 ctttcagcag cagcagcata cccggtaggg cgagtgcgaa acacagttgg aaaaacggta
    11221 cataaccgag ccattcaatc agataaccgg caaaggaatt gatgaccgtg cgcgggacgg
    11281 cggacaggct ggtaaacagc gcaagctgcg ttgcggtaaa tgcgggattg gtttcacgcg
    11341 ccatatacga tacgaacgcc gccgtcccca accccacgcc gaccgcttcc gcgccgataa
    11401 ctgccgccag catcagcctc tcgcctgtgc cgaccgtgtc gaaaggtccg aaccctgcca
    11461 gccatacaaa ccccaaaacg gttacagcct gcaccgcgcc gaatagccac aaggctttgt
    11521 ttacgccgat tttcagcatc cacacgccgc ccaagatacc tgccgccact gccggccaca
    11581 gtcctgcatt tttcgcaatc aaaccgatgt ctgtcttgct gaaacccata tccagataaa
    11641 acggcgttgc caacgcggtt gccatactgt cgccgagttt gtaaaggaag ataaacagca
    11701 gcacgcacac cgccgaagcg atgcccttgc gcgtaaaaaa ttctttaaac ggctctacca
    11761 cggtctgctt caacgtttta ggaacggcag gcggcaacac gggttcgcgc gcaagaaaca
    11821 gcgtcatcag aaggccgggc agcataaata atgaagtgat aacaaatact tctgaccacg
    11881 gcatcctgtc tgccaacacc aaactcaatg aaccgggaat cagggcggca atccggtagg
    11941 cgttcacatg aaccgagttg cccaaaccca attcttcgtc tgacaaaatc tcgcgcctga
    12001 acgcatccaa tacaatatcc tgactggcgg aaaaaaaagc gacaagcacc gacaagccgg
    12061 caatcagcgg cagatgatta cgggggttta aaaaggcata ggccgccaaa gccgccagca
    12121 accctgcctg cgtcagcagc atccacccgc gccgccgtcc caaaacgggc agcctgaccg
    12181 cgtccatcag cggcgaccac aaaaatttcc aagtaaacgg cagaccgatt aacgccatca
    12241 gcccgatgct cttcaaatcc acctgctcgc tgcgcaacca cgccggaatc aggttaatca
    12301 gaaagtacag cggcagcccc gaggtaaacc ccgtaaaaat acagacaagc atatttcggg
    12361 aaaagatttg cccgataaaa cctgatttcg atgcagtcat cgttcgtgca gcccaaaaaa
    12421 aacaaaagcc tattgtagca aatatcgccc gcctgctgaa aaatgccgcc ccgcgccgcc
    12481 ggtttgccgt tcaaatgcaa aatgccgtct gaaactgtgt tcagacggca ttgcttttct
    12541 gaaaaccaga cgtgcttaca ggctgtaata catttcaaat tccagcgggt gcggcgccat
    12601 gcggatgcgg cgtacgtctt cttctttgaa agcgatgtag ctgtcgatcc agtctttgct
    12661 gaacacgccg ccgcgcagga ggaattcgtg gtcggctttg agggcggcca gtgcttcttc
    12721 caaagaagcg caaacggtcg gcaccaatgc atcttcttcc ggcggcagat cgtacaggtt
    12781 tttatcggca gggtcgcccg gatggatttt gttttgaatg ccgtccaaac ccgccatcaa
    12841 cagggcggca aatgccaaat acgggttggc ggtcggatcg gggaaacgcg cttcgatgcg
    12901 gcgcgccttg ctgctgttca cggacggaat gcggatggaa gcggaacggt ttttggcgga
    12961 gtatgccagt ttggtcggcg cttcaaagtg cggcacgagg cgtttgtagg agttggtgga
    13021 cggattggta atcgcgttca aggctttggc gtgtttgatg atgccgccga tgtagtagag
    13081 cgcggtgtcg ctcaagccgg catagccgtc gcctgcgaac aggttttgac cgtctttcca
    13141 aatggattgg tgaacgtgca taccgctgcc gttgtcgccc ataatgggtt tgggcatgaa
    13201 agtggcggtt ttgccgaagt tgtgggcaac gttttgaatc acatatttca tgtcttgggt
    13261 ttggtcggcg cgtttgacca aggtggcgaa acgcgtgccg atttccattt ggctgccggt
    13321 accgacttca ctgtggtgga cttcgacttc gatgccgagt tcttccaaaa tgtttaccat
    13381 cgcggagcgc aggtcttgtc ccgcgtcaat cggagcaacg ggcgcgtaac cgcctttaac
    13441 ggcagggcgg tggccggtgt tttgaccgtc catgtgcagg ccgcttgccc atgcgccgct
    13501 ttcggacgtg atttcgtaac gggttttgtg catgtcggtt tcaaattcta cgccgtcgaa
    13561 gacgaagaat tcaggctcgg ggccgaagta tgccgtgtcg ccgataccgg aagatttcaa
    13621 ataggcctcg gcgcggcgtg cgatggagcg cgggtcgcgg tcgtaaccct gaccgtcggc
    13681 gggatcgata acgtcgcaag tcaacacaac agtcgcatca tcataaaaag gatcgacgaa
    13741 ggccgtagac gcatcgggac gcaactgcat atcggaagcc tgaatgcctt tccagccgcc
    13801 gatagacgaa ccgtcaaacg cctgaccgtt ttcaaaccac tcttcggggt cttccaacac
    13861 gatgcgcgca ggcacggtaa agtggtgctg cttgcctttg gtatcggtaa agcgcaaatc
    13921 gacaaagcgg gcttcgcttt cttcaatcaa ttttacggcg tttttaatag acatttttca
    13981 gctcctggaa aagggaaata gcaaaatatg cggaacgcgg cagattagct caaagccagc
    14041 atgattctac cacgtccatg ccgtctgaaa ctggccctgc gtcaaattcc aagctgtaaa
    14101 atatagtttc agacggcaat attgtcaaca atatgcttcg gtttgtctgt tcaaaagcgg
    14161 aatacccgcc cttttgtcca aatgccgaca aaacagatgc cgcctgaaaa cagtttagac
    14221 ggcatcgttc ccatcttcgc gccgccgtta taaaatgacc gccccgcctt gatggaatat
    14281 gactatgcac gccctccccc gctacgccgt ttttggcaac cccgtcgccc acagcaagtc
    14341 gccgcagatt catcaacaat ttgcccttca ggaaggcgtt gacattgaat acgaacgcat
    14401 ttgcgccgac atcggcggtt ttgtacaggc ggtttcgaca ttttttgaaa caggcggttg
    14461 cggggcaaac gttactgtac cgttcaagca ggaagcgttt catctggcgg acgagcattc
    14521 cgaacgcgct ttggcagcag gtgcggtcaa tacgctgatt ctgttgaaaa acggcaagct
    14581 gcgtggcgac aataccgacg gtatcggttt ggccaacgac atcacgcagg tcaaaaacat
    14641 tgccattgag ggcaaaacca ttttgctttt gggcgcgggc ggcgcggtgc gcggcgtaat
    14701 tccggttttg aaaggacacc gccctgcccg tatcgtcgtt gccaaccgca cccacgccaa
    14761 agccgaagaa ttggcgcggc ttttcggcat tgaagccgtc ccgatggcgg atgtgaacgg
    14821 cggttttgat atcatcatca acggcacgtc cggcggcttg agcggtcagc ttcctgccgt
    14881 cagtcctgaa attttcctcg gctgccgcct tgcctacgat atggtttacg gcgacgcggc
    14941 gcaggagttt ttgaactttg cccaaagcaa cggtgcggcc gaagtttcag acggactggg
    15001 tatgctggtc ggtcaagcgg cggcttccta cgccctctgg cgcggattta cgcccgatat
    15061 ccgccctgtt atcgaataca tgaaagccat gtaatatgtt ccgcatcgtc aaatggctga
    15121 ttgccctgcc cgtcggcatc tttatctttt tcaatgccta tgtgtacggc aacatcatta
    15181 cctaccgcgc cgtcgcgccc catcagactg cctttatgtc gatgcggatg aagcagtttg
    15241 aacaggaagg tcgcgatgtc gcactggatt accgctggat gccctacaac cgcatctcgg
    15301 tcaacctgaa aaaagccctg attgcttccg aagatgcccg tttcgccggg cacggcggct
    15361 tcgattgggg cggcattcaa aacgccatca ggcgcaaccg gaacagcggc aaagtgaagg
    15421 cgggcggctc gaccatcagc cagcagcttg ccaaaaacct cttcctcaac gaaagccgca
    15481 gctatatccg caaaggcgaa gaagcggcga ttaccgcgat gatggaagcc gttaccgaca
    15541 aagacaggat ttttgaactg tatttaaact caatcgaatg gcactacggc gttttcggcg
    15601 cggaagccgc gtcccggtat ttttatcaaa tacccgccgc caagctgacc aaacagcagg
    15661 cggcaaaact gacggcgcgc gtccccgccc cgctctacta cgccgaccat ccgaaaagca
    15721 aacggctccg caacaaaacc aatatcgtgc tcagacgcat gggttcggca gagttgcctg
    15781 aaagcgacac ggactgattg tttcagatat ggaaatgccg tctgaactgc ggttcggacg
    15841 gcatatgttt tctggttttt atagtggatt aacaaaaatc aggacaaggc gacgaagccg
    15901 cagacagtac aaatagcacg gaatcgattc acttggtgct tcagcacctt agagaatcgt
    15961 tctctttgag ctaaggcgag ccaacgctgt accggtttaa atttaatcca ctatacctgc
    16021 ccgacagccg caaagaccgt atcatacata gcaggcattg cggtgcggga ttactgccgc
    16081 aaacggcagg caaaaaaaat aaccgcttca aggcggtttt ttggtggcca gaggcggaat
    16141 cgaaccgccg acacacggat tttcaatccg ttgctctacc aactgagcta tctggccttt
    16201 gtctgtctcg ttaagagatg cgtattaaac caaattacgg gacgacatgc aagcatatcg
    16261 ggcaatattc tttgaaaaca ggtttaagtc aatgttttaa atttgaatta atttatgtaa
    16321 aaacaacata aatccgtatt tttgccgcct gcccgacgat attaggtcgc ccgtctgaaa
    16381 aatattttca atatttgaag ttcttaccca gataaacaga acgaacctgt tcgtttccga
    16441 ccaaatcatc aggttttccc gatgccaaca ccgtgccgtc tgaaataatg taggcccgat
    16501 cgcagatgct gagggtttcg cgtacgttgt ggtcggtaat taatacgccg ataccgcgcg
    16561 acttgagaaa tccgatgatt ttttggatgt cgatgacggc gatgggatcg acgccggcaa
    16621 aaggctcgtc caacaaaata aaatgcggtt tcatggcaag tacgcgggcg atttcgacgc
    16681 gtcggcgttc gccgcccgac aaagatgggg caggattatt gcgcaaacgc tcgatattca
    16741 ggtcggcaag cagtttttca acttcgccgt cgatgcggct tttgtctttg gtactgattt
    16801 ctaaaatggc gcggatgttt tgttcgacgg tcattttacg gaaaatagag gcttcctgcg
    16861 gtaggtagcc gacacccagg cgggcgcgtt cgtgtatggg caggtgacgc aattcctgcc
    16921 cgtccagcat cacgctgccc gcatcggcgg caatgagtcc aacaatcatg tagaagctgg
    16981 tggttttacc cgcaccgttg ggcccgagca ggccgacgac ttccccgctt tcgatttcaa
    17041 gggagaagct tttaacgact tggcgttttt tgaaactttt ttgcaggttt tgaacaacaa
    17101 ggcggctgac gtttgcgctc ataaatatct cttcaatatc ttcggtcggc aaatgccgtc
    17161 cgaactaggt ttatgtttca gacggcattt tgggattatt cggatttttg cgtactcgaa
    17221 ggctggataa cgacgctgac cctgccggat ttggaagcgg attttgcgcc ggattttgtg
    17281 ctgccgctga tggtatagac ttcggttttg gtgttgtatg taatcaccgc accttcggcg
    17341 acatcgccgc cgcgctgtac tttggcatta ccggttaaga ctacggtgct gcctgcagat
    17401 gaataagcaa cgttgtttgc ctgtccgcgc accgtgcctt tgccgccgtc caatgtctgg
    17461 ctgaagcgga ctggcgaacc ttccgccctc acggattcgc cgcctttgcc gccgcgtgta
    17521 acattgacgc gggcggcgga aatattgagc gtaccctgtc tgatgacgac gtttccgctg
    17581 aatgtggtgc tttggttggc ttgatcgagc gaaccttggt cggcctcaat ctgaataggc
    17641 tgcctgctgt cgctttgaag ggcaaaagcg ggggacgccg aaaaaaatgc tattaaaaca
    17701 aatagcttac atatcttttg tatcataaat cgtggctttc actttagatg agaagttcaa
    17761 catgcctgtt ttgtggtcgt aagtcatgcc gcccgcctga ccgtgcgatg caccatattg
    17821 gaaactgaca ggcgtatcgg tttgggcata ttgagattcg gtatcgacgt gcagcttttc
    17881 ggcttcaact ttacccgcct gccgtttgcc gtcggcggtt ttggtcagca caacgttgtt
    17941 tttaaaaaga acctgtttgt tttcggtatg gtaaacggct tcatcgctgc cgacttcgta
    18001 caacaacctg ccttcttgga agaacacgag atgcggtgag tcgaaatgaa tgtcgctgct
    18061 ttcgggaaac tgtttcgcgc ccttcgaact caaatgttct ttcaagtatc cctgttcgtc
    18121 aaaccgcctg ccgtccaagc cgtccattgt gtattgcggt tcgtcgggat tgagcctgac
    18181 ttcctcgatt tcgacttcgc tgatgcgtcc caaccatgcc gacaggctgc ccaaggcaac
    18241 cgccaatatc aatgggaacg caattccgta ccgccatctt actttcattt gatgtactcg
    18301 ttcaaagccg cgcccaaagt cccttgcgcc tgcataatca ggtcgcacac ttcgcgcacc
    18361 gcgcccgcac cgccggggcg tttggcaata taggcggcgt gttgcagcgt aaaccaatgc
    18421 gcgtcgggga cggcaaccgg caatccgcag cgtaccataa cgggcaaatc gaccacgtcg
    18481 tcgccgacaa aggcacactc ggcttcttcc acgccgacct gagcgcgcag ctcttcatac
    18541 gcggcgcgtt tgtccgaaat gcctttgaag tagtaattta tgcccaactg tttgacgcgg
    18601 atgccgacgg agggcgcgtc ccgacctgtg ataatcgcag tctgcacgcc gcttgcctga
    18661 agcattttca gaccgtgtcc gtccagtgtg tgaaacgatt tgatttcttc gccgttatcg
    18721 cggataaaga ttcgcccgtc ggtcaaaacg ccgtccacat ccaatatcag cagtttgatt
    18781 ttggcggcgc gcgcctgtaa ttcgggagaa attgcctgca tgggatttcc ttgttttcag
    18841 acggcatatc ttaccacaaa tgccgtctga aacggctgca acgccttata tagtggatta
    18901 acaaaaatca ggacaaggcg acgaagccgc agacagtaca gatagtacgg aaccaattca
    18961 cttggtgctt caacacctta gagaatcgtt ctctttgagc taaggcgagg caacgccgta
    19021 ctggtttttg ttaatccact atacaatccg cgccgccaaa aggtcgtgca tattcagcgc
    19081 gccgatcagt acgccgtcgg catcagtaac cagaagccca ttcacatggt ttgcctgcat
    19141 gactttcagg gcttcggtgg cgagacgttc ggcggagatg gttttaggat gcgtatgcat
    19201 gacttcgtct atcgaaagac cggtaaaatt gtcgcattct tgaaacaggc ggcgcaaatc
    19261 gccgtcggtg aatacgcctt tcagacggca ttgcccgtcc gttaccgcca acatgcccag
    19321 ccctttttca ctcatgctga cgatggcttc tttcaagggc gtgccgagtc ggacggcagg
    19381 caggccgccg cctttgtgca taatgtcggc aacgcgcaaa agcaggcgtt tgccgaggct
    19441 gccggcaggg tggctcaagg cgaagtcgtc gggcgtgaac gcacgcgcac gcagcaggac
    19501 gaccgccaac gcatcgccca aagccatgac ggcggtggtg ctggtggtcg gggcaagccc
    19561 cagcgggcag gcttcttgcg aaaccgatgc ggtgatatgg atgtcggcat ggcgcgccat
    19621 ggttgaatcg gggcgggcgg taatgcagac aagcgtgatg tttttgcgtt tgagcgcggg
    19681 gatgatggcg gcgatttcat cgctttcacc ggaattggaa atggcgacga ccacgtcgtt
    19741 gtccacaatc atgcccaaat cgccgtgtgc cgcttccgca gggtggacga aaaacgcggg
    19801 cgtgccggtc gaggccatgg ttgccgccat tttgcgcccg atatgtcccg acttgcccat
    19861 gcccgtgata acaaccctgc ccttgcagtg caacaacgcg tctgccgcaa ggacgaagtt
    19921 ttcgtccaat tccgctgcaa tttcgcgcaa gccttccgct tcggtgtgca acacttcgcg
    19981 cgcccagtcg agatattttc cgttttctgc cattgccatc cgcctttgct gtaacaaaac
    20041 tacccaaaat ttccgaatcg gggtagcata agcattcaaa ccccgccatc catccaaagg
    20101 aatcagaaat gactatttta tcggacgtta aagcattagg acaacaaatc tggctggaca
    20161 acctttcccg ctcgctcgtg caaagcggcg aattggcgca aatgctgaaa caaggcgtgt
    20221 gcggcgtaac ttccaatccc gccatcttcc aaaaagcctt cgccggcgac gcgctttacg
    20281 ccgatgaaat cgccgccctc aagcagcaaa acctcagccc caaacaacgc tacgaaacca
    20341 tggcggttgc cgatgtgcgt gccgcctgcg gcgtttgcct tgccgaacac gaatccaccg
    20401 gcggcaaaac cggtttcgtc agcctcgaag tttcgcccga attgtccaaa gacgcgcaag
    20461 gcacggtaga agaagcgcgc cgcctctacg ccgccatcgg gtgcaaaaac gcgatgatta
    20521 aagtgcctgc caccgacgca ggcatcgatg cgctcgaaat cctcgtttca gacggcatca
    20581 gcgtaaacct cacgctgctg ttctcacgcg cccaaaccct caaagcctac gccgcctacg
    20641 cgcgcggcat tgccaaacgc ttggcagccg gacaaagcgt tgcccatatc cacgtcgtcg
    20701 ccagcttctt catctcccgt gtggacggcg cgctggacac aacgctgccc gaccacctca
    20761 aaggcaaaat cgccatcgcc cttgccaaaa ccgcctatca agattgggaa caatatttca
    20821 ccgcccccaa atttgccgca ctggaagccc aaggcgcaaa ccgcgtgcag cttttatggg
    20881 catctaccgg cgtgaaaaac ccagcctatc ccgacacgct ctacgttgac agcctgatcg
    20941 gcgcgcacac cgtcaacacc gttcccgatg ccacgctcaa agcctttatc gaccacggca
    21001 cagccaaagc cacgctgacc gaaggcgtgg acgaagcacg ggcgcggctc gctgaaattg
    21061 ccgcgctcgg catcgatgtc gaaaccttgg cggcgcgttt gcaggaagac ggtttgaaac
    21121 agtttgaaga agcgtttgaa aaactgctcg caccgttggt ttaaactttt catccccgat
    21181 gccgtctgaa aggctttcag acggcatcgc ccttttgacc ggacacagtg ggttcaccct
    21241 aaaaatatta atcaacaaga agttaatgca cgacattacc caccaacaca aaaggaaata
    21301 gaatcatggc aaaagcactc gaaatcattt cacccaatga aatttattca gatctgattt
    21361 ttaaggatcc ggtacctccc catactatat atacagaatt gatgaaactg attggtagaa
    21421 atgcaagtaa tgagagaatc gcagatagag ccttcgattt tttctcgtcc ggccttatgg
    21481 atggttcagc taccgaagag caatataatg ctctatatga tttaaccttg cttgaagagc
    21541 ccgggatgga actgaataaa gatgagataa tggctttgat taatagtctt aaataaaggg
    21601 gccgtaccgg atatgtacac aggacgtttc gcccccagcc cgaccgggct gctccacatc
    21661 ggctcgctgc tgaccgccgc cgcttcctat gccgatgcac gctcaaacgg cggcaaatgg
    21721 ctggtccgca tggaagacct cgatccgccg cgcgaaatgc cgggggcggc aagccatatc
    21781 ctgcacacgc ttgaggcatt cggattcgag tgggacggag aagtcgccta tcagagccgc
    21841 cgttacgccc tgtatgaaga aaccctatgc cgtctgaaaa ccgccggact ggtctatccc
    21901 tgccattgca gccgcaaaga ctggcaggct gcggcagtcc acggcgcaga cggattcgtc
    21961 tataacggac gttgccgcaa tccgcagcaa cgccctgcac cgcaaggcaa acagcctgcg
    22021 tggcgcatcc gcgtccccga ccgcgacatc ggcttttcag acggcatcgt cggcggttac
    22081 gcccaaaacc tcgcccgcga catcggcgat ttcgtcctgc ttcgtgcaga cggttactgg
    22141 gcataccagc tcgccgtcgt tgccgacgat gccgaacagg gcgttaccca catcgtccgc
    22201 ggacaagacc tgcttgtttc tacgccgcgc caaatctatt tgcagcaatg tttgggcgtt
    22261 ccgacaccgc aatatgccca cctgccgctg ctgaccaacg cacaagggca gaagtggtcg
    22321 aaacagacgc tcgcccccgc attagattta aaccgccgcg aacaactcct ccgccaagtg
    22381 ttccgttacc tcaagctgcc cgaagcaccg gaagccgacc gccctgccga actgctcgac
    22441 tgggcggtgg cacactggga tatggacaaa gtgccgaaac acgtcattac caccccctaa
    22501 acaccgcccg acaaacgcac aaatgccgtc tgaagccttc agacggcatt tcacacatac
    22561 agccccgccc tattcgcgcg tatttgcccg ttcgacctct ttccacgctt cgagaatcag
    22621 gctgccgtcg ttgtctttca agagcgttgc gtcggaaagc atacgccgcc aagtccgcgc
    22681 acctttcaaa ccgtgcatca gcccgaggct gtggcggacg atgtggcgca agattgtgcc
    22741 gcgtccggct tggatctggg cttggctgta tgtgtagagg cactgcacca aatcggcgta
    22801 ttcgatcggg ctgcgagtat cgccgtaaaa caatctgtcc cattcgcgca tcaccatcgg
    22861 gttgtggtac gcctcgcgcc cgaccattac gccgtcaacg tgttgcaggt gtccggcgat
    22921 tgcttcgttg gtggtgatgc cgccgttgat gatgatttcc agcccgggaa actcctgctt
    22981 gaggcggtaa acgtaatcgt atttcaacgg gggaacgtcg cggttttctt tgggggaaag
    23041 accgtccagc caagcgttgc gggcgtggac gatgaaggtt ttgcaggcgg ttttgtcgcg
    23101 cagcgtgccg acgaaatcgg caacggtttg gtattcggtc tgcctgtcca caccgatacg
    23161 gtgtttgacg gtaacgggaa taccgaccgc gtcctgcatg gcgttgaggc agtcggcaac
    23221 cagcccgact tcgttcatca gacacgcgcc gaacgagcct ttctgcacgc gcggactggg
    23281 gcagccgcag ttgaggttga cctcgttgta accgtatgcc tcggcggctt tggcggcttt
    23341 cgccaaatcg gacggatcgc tgccgcccag ttgcagggcg acgggctgct cgccttcgtt
    23401 gaacatcaaa aagcggtctt tgtcgccgta aacaatcgca ccggcattga ccatttcgct
    23461 gtacagccaa gtatttcggg taatctggcg ggcaaggtaa cggtagtgcc tgtccgtcca
    23521 gtcgagcatc ggggcgacgg aaaggcggcg cgggggaagg gtgtgtgtat tgtcgttcat
    23581 tgtcgatatt tcatcattgc ggattcaatt tcaatccgga acaaccttca tttttgggga
    23641 aatccgcgtc atgaaagagt ccagcagtat agttaccggc ccgtcgttgc agagcgacac
    23701 ctgcatatgc gtgcggaaac gccctgtttc gacatgaatc ccgtgcccgc gcaacagttc
    23761 tgccgtatgc agataaagcc gttttgcctg ttctgcaggt gcggctttcg aaaatgacgg
    23821 ccgccggccg cttgccgcat cggcataaag cgtaaactgc gacaccagca gcacggatcc
    23881 cccgacatcc ttcaaagaca ggttcaactt gcccgcttcg tcttcaaaca cgcgcaaatg
    23941 ggcgattttg tcggcgacat agcgtgcatc tttttctatg tcgctatgcg ttacaccgag
    24001 cagtacgacg aatccgccgt cgattttgcc gcaggtttcc gtgccgtttt cggacacgac
    24061 atccaccttt gcacctaccg ttttctgtat gaccgcacgc ataagccgtc ctccttacct
    24121 gaacgtgcaa tgccgtctga aaaggcttca gacggcatcg gtattggaaa tgccattacg
    24181 gtttgacacc gttttcttcc aaaatggcat cgattttcaa gcgggctttt tcctgtctca
    24241 aaccttgttc caactggttt ctgaccaact cgaaaggctg cgcgtcgggg tttttcccga
    24301 cctcgctgag tttgaacaga taatagcgtt cgcccaattt gaccggatcg cgggtaacgt
    24361 cgccccgatt catcgctgca aactgcgaag ccagcggctc gggaagctgc tgcgccataa
    24421 tgaaaccgtc aaacgcctgc tcgtcgttcg gataacgctt catcagccct tcaaaagaca
    24481 gccctttgag caggagctgc tgcgcctgac gcgcctcctc ttcggttgcg aagctgacct
    24541 gctgcaattt gatcatgcgg atttgccgct cataaaactg acgcagtgcg ctttcggaaa
    24601 ccgtttccga acgttccaga aaacggacgt actcctcggc ataaaaagac gcttcggcga
    24661 ttttaaagcg gttttggaca tccttatcct tatccaaacc ttccttcaat gccctgtttt
    24721 tcaaaacttc caaagtttgc agccgacgga cggcatcgtt tcggattgcc tgcccgtccg
    24781 gtttttggga ctgctccgca tgccggtctg cctgctgcat gatctgcgcc accagcgtat
    24841 ccaccaaagc cgggtcgatt tcgggtgctt tggctgccgc aaaacctgcc aacattgcag
    24901 caataactgc ggcagcggtt tttttctgtt tcatggtatt ccctgtcctg cgcggcggca
    24961 aaacgcctgt ctgaacgtct tgccgccgta tcccgttttc agaattattt tgcaggtttg
    25021 atgtttgcct tgcccaacag tgcaccgacg gcacggtcaa tccgttccgc ctgaaggttg
    25081 ccggcaatct gtcctttcat ttcatcaaaa gaaggcactt tcacctcgcg gctgtcgttg
    25141 acataataaa cgccgtagaa atcgccgttt ttcagcggcg ttgccgtaaa ttcgcctttt
    25201 ttcaagtcct taattgcctg ataaagcggc ggaacaccct gttccaaatc tttcagcggc
    25261 acatatccga ccggcgcgcc ggtctgtttg gtacggtcgt tgagggaata ttgtttcaag
    25321 acggcatcga aacctttttt cgccttcaag tcggcaaccg ctttttttgc attttcttcc
    25381 ttgtcggtca ggatttcgcc caactggact tcctgcgtac ctttgtaaaa accgctgata
    25441 ttgtcatatg cggcttttac ttcctgctcg gaaaccggtt gggttttggc gatatgcaat
    25501 gcgtatgcct cgccgttcaa gccatatttt accgcctgcc aaacggtttt gaaggacggt
    25561 ttcttgtcgt cgcccgactt tttcgcttcg gcacgcaatt tggcaagcgc atttttaaac
    25621 tctgccgacc ggtcgagttt caggcgtttc acttcctgtg cgaccacggt gttgaccact
    25681 tcgttttcca gcagggattg gcgcagttgc ggcgtgtctt cggcacggct gttttccgca
    25741 cggaatgcgg caacctgcgc atcgatgacg gaactgtcga ttttctgacc gttgacggtt
    25801 gccagcgttt gggcaaacag gctgccggaa caggcaagca gtgcaacgga agtcaggatt
    25861 tttgctttca taatcttctc tctttaaatt ttaaattgaa atgttcgggc agacttcatt
    25921 cagtccgccg tatggaaata ctcgtcaggg gtagccgccc ggatgccgag cgcgtgaatc
    25981 atgccgcctg aaaacaaatc tttgagcagc gatttgaccg ttttctggcg gttcaggcgg
    26041 cttacgcctt caaaacggcc gctgacgacc aaaacggcat aatgtccgcc gccggtattg
    26101 cccgcgtgtc ctttgtgcag atggctctca tcgccgattt ccaacaccag cggatcgagc
    26161 gtctgcaggc gttcgcggat caaatcgacg gccggcatta tttgaacacc gctttaaacg
    26221 gcttgatcag cacttcgctg tacacgcctg catgaacata gggatcgtct tccgcccacg
    26281 cctctgccgc atccaaagac tcgaactgcg ccacaatcaa actgcccgaa acgcggttgg
    26341 agtcctccgg caaaggattc gggcctgccg tcaacagccg gccttccgac ttcagcgtct
    26401 ccagccgttt gaggtgttcg ggacgtgccg ccatacgcgc ttcatacaca ttctccccgt
    26461 ctgttgccag caacataaaa tattccacag tcaatcctcc tttttcagac aggtactcag
    26521 ataaataccc tgaataataa agaaaacaag catcagtgca gtcgagccga acattttata
    26581 gttgacccat tgcgactcga accgggtaaa cacaaaccag ttggcgatac ccataaaaat
    26641 caggaaaccg acccacatat acgtcaattt cgcccatacg gcatccggaa gctgaatctc
    26701 cctgccgata ctcgccttca agccgttttt accggcgagg tggctgcccc acaggaacag
    26761 cgcgcccagc caaaacaaaa cgctcggctt ccacataatg aagcggctgt cgcccaaaac
    26821 aatggttgcg ccaccgaata tcacaatcag caccagtccg acccactgca tcgtatccag
    26881 ctttttatat ttccaataca gaaaagccgc ctgaaccaca ccagcaacca aggcgaccgc
    26941 cgtagcggca atcatatttt tggtaacggt ataggtggcg aaaaacagga tgacggacaa
    27001 aaggtcgctg acgaatttca tatccaaatg agaaagcaaa tcaaataaac gctaaatcat
    27061 acaggcagaa ccctgttttt gcacctgcaa aaccaacaaa ttttgttttg attgatgcaa
    27121 atatgcacag atgtttttga aaaaagatgg agatatgtca taatttgtaa aaacggcgaa
    27181 tgattgccgt ttaaaatgtg gcggcggtcg gtacattcac atattaaatg cccgccggcc
    27241 gactgccccg ccgatgcccg atgatgacga aatttacaga ctgtacgcgg tcaaaccgta
    27301 ttcagccgcc aacccacagg ggatacatct tgaaaaacaa cagacaaatc aaactgattg
    27361 ccgcctccgt cgcagttgcc gcatcctttc aggcacatgc tggactgggc ggactgaata
    27421 tccagtccaa ccttgacgaa cccttttccg gcagcattac cgtaaccggc gaagaagcca
    27481 aagccctgct aggcggcggc agcgttaccg tttccgaaaa aggcctgacc gccaaagtcc
    27541 acaagttggg cgacaaagcc gtcattgccg tttcttccga acaggcagtc cgcgatcccg
    27601 tcctggtgtt ccgcatcggc gcaggcgcac aggtacgcga atacaccgcc atcctcgatc
    27661 ctgtcggcta ctcgcccaaa accaaatctg cactttcaga cggcaagaca caccgcaaaa
    27721 ccgctccgac agcagagtcc caagaaaatc aaaacgccaa agccctccgc aaaaccgata
    27781 aaaaagacag cgcgaacgca gccgtcaaac cggcatacaa cggcaaaacc cataccgtcc
    27841 gcaaaggcga aacggtcaaa cagattgccg ccgccatccg cccgaaacac ctgacgctcg
    27901 aacaggttgc cgatgcgctg ctgaaggcaa acccaaatgt ttccgcacac ggcagactgc
    27961 gtgcgggcag cgtgcttcac attccgaatc tgaacaggat caaagcggaa caacccaaac
    28021 cgcaaacggc gaaacccaaa gccgaaaccg catccatgcc gtccgaaccg tccaaacagg
    28081 caacggtaga gaaaccggtt gaaaaacctg aagcaaaagt tgccgcgccc gaagcaaaag
    28141 cggaaaaacc ggccgttcga cccgaacctg tacccgctgc aaatactgcc gcatcggaaa
    28201 ccgctgccga atccgccccc caagaagccg ccgcttctgc catcgacacg ccgaccgacg
    28261 aaaccggtaa cgccgtttcc gaacctgtcg aacaggtttc tgccgaagaa gaaaccgaaa
    28321 gcggactgtt tgacggtctg ttcggcggtt cgtacacctt gctgcttgcc ggcggaggcg
    28381 cggcattgat cgccctgctg ctgcttttgc gccttgccca atccaaacgc gcgcgccgta
    28441 ccgaagaatc cgtccctgag gaagagcctg accttgacga cgcggcagac gacggcatag
    28501 aaatcacctt tgccgaagtc gaaactccgg caacgcccga acccgctccg aaaaacgatg
    28561 taaacgacac acttgcctta gatggggaat ctgaagaaga gttatcggca aaacaaacgt
    28621 tcgatgtcga aaccgatacg ccttccaacc gcatcgactt ggatttcgac agcctggcag
    28681 ccgcgcaaaa cggcatttta tccggcgcac ttacgcagga tgaagaaacc caaaaacgcg
    28741 cggatgccga ttggaacgcc atcgaatcca cagacagcgt gtacgagccc gagaccttca
    28801 acccgtacaa ccctgtcgaa atcgtcatcg acacgcccga accggaatct gtcgcccaaa
    28861 ctgccgaaaa caaaccggaa accgtcgata ccgatttctc cgacaacctg ccctcaaaca
    28921 accatatcgg cacagaagaa acagcttccg caaaacctgc ctcaccctcc ggactggcag
    28981 gcttcctgaa ggcttcctcg cccgaaacca tcttggaaaa aacagttgcc gaagtccaaa
    29041 caccggaaga gttgcacgat ttcctgaaag tgtacgaaac cgatgccgtc gcggaaactg
    29101 cgcctgaaac gcccgatttc aacgccgccg cagacgattt gtccgcattg cttcaacctg
    29161 ccgaagcacc gtccgttgag gaaaatgtaa cggaaaccgt tgccgaaaca cccgatttca
    29221 acgccaccgc agacgatttg tccgcattac ttcaaccttc tgaagtacct gccgttgagg
    29281 aaaatgcagc ggaaatcgtt gccgatgatt tgtccgcact gttgcaacct gctgaagcac
    29341 cggctgttga ggaaaatgta acggaaactg ttgccgaaac gtccgacttc cacaccgccg
    29401 cagacgattt gtccgcactg ttgcaacctg ctgaagcacc ggccgttgag gaaaatgtaa
    29461 cgaaaaccgt tgccgaaata cctgatttca acgccaccgc agacgatttg tccgcattac
    29521 ttcaaccttc tgaagtaccg gccgttgagg aaaatgcagc ggaaatcact ttggaaacgc
    29581 ctgattccaa cacctctgag gcagacgctt tgcccgactt cctgaaagac ggcgaggagg
    29641 aaacggtaga ttggagcatc tacctctcgg aagaaaatat cccaaataat gcagataccg
    29701 gtttcccttc ggaatctgta ggttctgacg cgccttccga agcgaaatac gaccttgccg
    29761 aaatgtatct cgaaatcggc gaccgcgatg ccgctgccga gacagtgcag aaattgctgg
    29821 aagaagcgga aggcgacgta ctcaaacgtg cccaagcatt ggcgcaggaa ttgggtattt
    29881 gattcccaac tgccctttcg cagatcaagg atgccgtttc agacggcatc tttttttgcc
    29941 ttatcggtgt aacggataaa gtttgaaccg gcacaggctc aaacagcagg ccgacggcaa
    30001 caaaatgccg tctgaaaccc ctaaaggctt cagacggcat tggcggcggc ggtatcaggc
    30061 agtttgatag gcaaccgaat cgtcaccgct tttcttttga atgaactcga ttttgtatcc
    30121 gtcggggtct tcgacgaagg ctatcacggt tgtgccgtgt ttcatcgggc cggcttcgcg
    30181 gacgacgttt ccgccctgcc gcttcacacg ttcgcaggct tcgtaggcat cgtccacttc
    30241 aaccgcgatg tgtccgtagg cgttgcccaa gtcgtatcgt tccgtatccc agttgtgcgt
    30301 cagttccaaa accgtgctgt cggtttcgtc gccgtaaccg acgaaggcaa gggtaaatct
    30361 gccttcggga taatcttttc ggcggagcag tttcataccc aaaacgtttt ggtagaaatc
    30421 gagggatttt tcgagattgc ccacgcggag catagtatgg agtaagcgca tttttgtgtt
    30481 cctctcggta gtggttaaac ttcgattttg tttggcgtaa acgtctgcca tttgttgcag
    30541 gcaggacaat gccagaaaaa gacttgtgat ttgaagtggc agtttcggca ccggtacatc
    30601 acgctgcgct gtagctgccg tccgataacc gaacgcatca tatcggcatc ggctttccaa
    30661 gccggatcca aatcgctgag tttcaaacca agcaggcggt acacgccgtt gaggtcgggc
    30721 ttgcggcgga caagctcgac ggcggtttgc gcggcttctt tctcgcactt aagcagcagg
    30781 gatttctcgt acacgacatt gatcaggtca agttcgggaa acgtctgcat atatcctgtc
    30841 agacggttca agccttcttc aggttttccc tgcgcggcat aggcttcgta aagcttctcg
    30901 ccgaccatgc tcaagtatgc atggttttgc tgctcgatgg cggcataggc ttcgacggcg
    30961 gcagggaaat tgccttgtcg gtgttcgatg tcgcccaaaa tcatgttggc acgggtgcat
    31021 tttttgttgg cttcgagtgc cttgccgaca ttgaaacgcg cgacatcgaa attggacttg
    31081 aacagcgcgg cttgggcaag ttcgcaataa aactgggcga tttcaaactg ataggtctga
    31141 tcgtcatggc tgagcagccg ggcggtttca accgcttttt cccaatccct gtcctgttgg
    31201 tagatattga gcaggtgctg tctggcttca cgcgccattt taccgtcttg cagccccaaa
    31261 aaaatctgtt cggcacgatc gaccaacccc gcactttggt agttttgcgc caattcaaac
    31321 aggacgcgcg cgcgcttttc gccgaccgta tcgggagaat cgagcattgt ccggtgtatg
    31381 ttgatggctt tgtcgttttc gccacgctga cggtaaagct tgcctagggt gaggtttagg
    31441 tcgtatgact gaggctgctg atcaatgacc tctgccaatt ccctggcggc acgtccgctg
    31501 ttgcggtcaa ccaaggcatc cagactttta taaaatcccg acggtatgct ttttgcctgc
    31561 tttaatacag tcttcatatc cacacgggcg gcaaaccagc ccatcgcgaa gaaaacgggc
    31621 aaaaggataa tcggcagcag gataatccac aattcattgt ccatatcggc tttctcaagg
    31681 ctgtttggca gattcgggcg cattttgcgc cggtggtgcg gtcagctctt tccccgtcaa
    31741 acgcgcattt ttctttactt cggcacgcaa cctgccgttc tcgccacgta acgacaacaa
    31801 ccgtccgaac aaggcaaaca ttccaaaaac aataccgact acaaatgcgc cgaacaatac
    31861 gacaatcagc ggcaaatcga atttttgccc cggcaggtag gaaaaggtaa cggcatccgt
    31921 attaatgacg gcaagcagca ggaagagcag caggataatg attttgatga cggtatagat
    31981 aagtttcatg tttgctccgt aaataaaaac gccgcccgga cagcttcgca ctctgaacca
    32041 agattgcgct agtttaaacg atttgcacgg tttcggatag gatgcggcag cgtgttcgga
    32101 cgacatacgg agtatgcgat tgccgacaat tttaccaaat acaccgttcc tttccatttg
    32161 aaaaataacg gattggacac cgcatcgaca gaaaaacccg ccgcgcactt gtcaaaaccc
    32221 tgtttgcagg cgtatcttta caatcttcaa attcaaaccg ttcattgaaa catatcagaa
    32281 taagaaaggc tttacatcat gagcagaccc gtacccgccg tattcggcag cgtttttcac
    32341 agtcaaatgc ccgtcctcgc ctaccgcgaa ggcaaatggc agccgaccga atggcaatct
    32401 tcccaagacc tctccctcgt accgggtgcg cacgccctgc actacggcag cgaatgtttc
    32461 gagggactga aagccttccg tcaggcagac ggtaaaatcg tactgttccg tccgactgcc
    32521 aatatcgcgc gtatgcggca aagtgcggac attttgcacc tgccccgccc cgaaacccaa
    32581 gcctatctcg atgctttggt cgaactggtc aaacgtgccg ccgacgaaat tcccgatgcg
    32641 cctgccgccc tgtacctgcg cccgacctta atcggtaccg atcccgtcat cggcaaggcc
    32701 ggttctcctt ccgaaaccgc cctgctgtat attttggctt cccccgtcgg cgactatttc
    32761 aaagtcggtt cccccgtaaa gattctggtg gaaaccgaac acatccgctg cgccccgcac
    32821 atgggccgcg tcaaatgcgg cggcaactac gcttccgcta tgcactgggt gctgaaggct
    32881 aaagccgaat acggcgcaaa tcaagtcctg ttctgcccga acggcgacgt gcaggaaacc
    32941 ggcgcgtcca actttatcct gattaacggc gatgaaatca ttaccaaacc gctgaccgac
    33001 gaatttttgc acggcgtaac ccgcgattcc gtactgacgg ttgccaaaga tttgggctat
    33061 accgtcagcg aacgcaattt cacggttgac gaactcaaag ctgcggtgga aaacggtgcg
    33121 gaggcgattc tgaccggtac ggcagccgtc atctcgcccg ttacttcctt cgtcatcggc
    33181 ggcaaagaaa tcgaagtgaa aagccaagaa cgcggctatg ccatccgtaa ggcgattacc
    33241 gacatccagt atggtttggc ggaagacaaa tacggctggc tggttgaagt gtgctgatgc
    33301 tttaaataaa aaatgccgtc tgaaacccgt ttggcgtttc agacggcatt ttcgcatccg
    33361 aaccgtttcc gccgcacctg cagcaagtcg gcacaaaggc aatcggttaa aacaagcgtc
    33421 cgcatttccc atcccgcctg ccgtaagtcg ggcatttctc tagaaatacg cttcagacgg
    33481 caaaccgccg cccgaaaccg atatgtggca cggacggcgc acggatttga aaacggcgga
    33541 ttatccctcg gtgctcaagg cattgatgct gtaaccgccg tcaacgtaag tgatttcgcc
    33601 ggtaatgccg gacgacaggt cggacagcag gaaggcggcg gtattgccga cttcttcgat
    33661 ggtaacgttg cggcgcagcg gattgtgggc ggcgacgtgt cccaagagtt tgccgaaatc
    33721 ggcgatgccg gaggcggcga gtgttttgat cggaccggcg gaaatgccgt tgcagcggat
    33781 gccttctttg cccagacagg cggcggtaaa acggatgccc gcctcaaggc tggcttttgc
    33841 catacccatc acgttgtaat tcggaatcgc gcgcaccgcg cccaagtagc tcagggcaac
    33901 gatggcggag tttctgccgc gcatcatcgg acgggcggct tttgccaatg cgggcaggct
    33961 gtatgcggaa atttcgtgtg cggtgttgaa cgcttcgcgg ctgatgctat cgaggaagtc
    34021 gccgctcaag gcttctttcg gtgcgaagcc gatggaatgc accaaaccgt ccaagccgtc
    34081 ccaatgtttg cccaaatcga cgaacacttg gttgatttcg tcgtcgctgg cgacatcgca
    34141 gcggaacacg agttcggaat ccaattccgc cgccattttg cggacgcgct cttccagttt
    34201 gtccacaacg taggtaaacg ccagttccgc gccttgttcg cggcaggctt tggcgatgcc
    34261 gtaagcgatg gaacgctcgg aaatcatgcc ggtaatcaga atttttttgc cttgcagaaa
    34321 acccattttg tatccttcaa atagtgttcg gttcgttcta aaccgttgat tatagcaaat
    34381 tgtccctgtt tctgtgtttt cacgttgcag catgcaaacg gcaatgccgt ccgaagcgga
    34441 tttcagacgg catcggacgt ttcaaatacg gtttaaggca tcagatgccg cgcaacaatt
    34501 cgttcacgct ggttttcgca cgggtttgcg cgtccacgcg tttgacgatg acggcgcagt
    34561 aaaggctgtg gctgccgtct ttggaaggca tactgccgga cacgacgacc gaacctgtcg
    34621 gtacgcggcc ttggtagatt tcgccggtgg tgcggtcgaa gattttggtg gattgaccga
    34681 tgaacacgcc catcgaaatc acgctgcctt cttcgacaat cacgccctca acgatttcag
    34741 aacgcgcacc gatgaagcag ttgtcttcaa tgatggtggg ggcggcctgc aggggttcga
    34801 gtacgccgcc gataccgacg ccgccactca agtgcacgtt tttaccgatt tgcgcgcaag
    34861 agccgacagt cgcccaagta tcaaccatcg cgccttcgtc gacgtatgcg ccgatgttga
    34921 cgtaagacgg catcagcacg acatttttcg ccacaaagct gccgcgtcgg gcaaccgcac
    34981 ccggaacggc gcggaagcct gcgtttttga actcgtcttc agaccagtcg gcaaacttgg
    35041 tcggcacttt gtcgaagtat ttgttcacgc cgtcgttgag gacttcgttg tcttggatgc
    35101 ggaaggacag caacacggct tttttcgccc attcgttgac tttccactca cccacgccca
    35161 agcgttcggc aacgcgcagt ttgcctgaat cgagttggcg gatggtttcc aacacggctt
    35221 ctttgacttc gggagtaacg gtggtcgggg taatgtccgc gcggttttca aaggcggttt
    35281 cgataatgtt ttgcaaagac ataatgtttc cttatgtgag atgtttcgtg ggacgcttgc
    35341 cggtattttc aagcagtatg ttcatttgaa atgaatgcgc tattgtgcca cgcaaacgca
    35401 tattcgtcag caatacacgg gcggttgccg aacattggcg tttcggaatc gggcgggcgg
    35461 caggtattgc cttttccgtg cccgaatcaa tacagaacgg cggcggcact tttatgccgc
    35521 gccgccgcct ttcagacggc attcgcggta aaacgccatc agcccttcgg tcgaggcatc
    35581 gtgtacggac gtgccgcctt ccagttcgcc gatgatggtt ttcgccaact gtttgccgta
    35641 ctcaaccccc cactgatcga aggggttgac gttccatatc gcgccttgga cgaaggtttt
    35701 gtgttcgtaa gccgccatca gcatacccag attgtagggc gtgaggcggt cgagcaggat
    35761 gctgttgctg gggcggttgc cggggaattc tttgtgcggc gcgaggcgtt cgcgttccgc
    35821 ttcgggcaaa tctgccagtt cggcgcgtgc ttcgtccaag gttttgccct tcatcagggc
    35881 ttccgcttgg gcaaaggcgt tggcaacggt aaaacggctg cgtccgtcct ccacgccctg
    35941 cgccgtcatc gggacgataa agtcgcaggg aatcaggcgc gtgccttggt ggagcagttg
    36001 gaaataggcg tgctggcagt tgaccccttc accgccgaac acgatgccgc ccgttttgca
    36061 cacggcggga ctgccgtctg aagcgcggct tttgcccaaa ctctccatat cgagctggtt
    36121 cagccacacc ggcagcaggc gcaggttgtg gctgtacgga acggcggtct gcccgtccgc
    36181 gtgttggaaa ttgttatacc acacggcaat cagtgccatc agaacgggaa tgttgcggcg
    36241 cggcggcgtg tggaaaaaat ggctgtccat cgcgtgcgcc cccgccaaca actcgcggaa
    36301 acgcgccccg ccgaccgcaa ccatcacggg caaaccgacg gacgaccaga cggaatagcg
    36361 tccgcccacc cagtcgtaca tcgcaaacac gcgttccgcc gcgataccga aagccgcagc
    36421 tgccgcagtg tcggcagaca ccgcgcaaaa atggcacgcc gtttcggatt ccgagaaccc
    36481 cgcaccgcga taccacgcct tgactgcctg tgcattgagc agggtttccg gtgttttgaa
    36541 ggacttgctg gcaacgcaaa acactgtcgt ttcggggttc agacggcata aaaccgcatc
    36601 caggcaggca ggatcggcgt tggcggcaaa atggacggcg atatgccgtc tgaacggctc
    36661 gagtgcctgc acgcacattg ccggcccgag gtcggatccg cctatgccga tgtggacaaa
    36721 atccgtaatc cgtttcccag ttatcccctg atacgaaccg tcgtccaaac tgtgtgcaaa
    36781 ctccaacgca cgatttaact cgcggcggat ttcgggcaac acgtccctgc cgtccacata
    36841 aacggcatcc gcaccgtcgg gcaggcgcaa agccgtatgc agcgcggcac gcccctcgct
    36901 gccgttgact ttcgcacccg tccgcaaagc acgcattttc ccttccaaat ccgccgcgtc
    36961 ggcaagattg cagagcagtt gcagcgtatc ttcgcccaaa cggttcttgc tgtaatcgaa
    37021 caacatcccg tccaaacgct cgtgcatacg ctcaaaacgg tcgggttcgc aggcaaagcg
    37081 gtcgcgcaaa aggacatgac gcgtatcctg ataatggcgt tcgagcgcat gccatgcacg
    37141 ggtaaaagca ttcatctgtt ttccttgatt tttcagaacc ggattaaaat gtagcagaat
    37201 gtagtttaac aaacggcagc ggctttggcg aatctccgga acaccgcccg ccgcgtccaa
    37261 tagcacctta tttccatatg gcgaaaatat agtgaattaa caaaaatcag gacaaggcgg
    37321 cgagccgcag acagtacaaa tagtatggaa ccgattcact tggtgcttca gcaccttaga
    37381 gaatcgttct ctcttgagct aaggcgagcc aacgccgtac cggtttttgt taattcacta
    37441 taccctccgg ccggcatttg acccgcaaca atatcctgca agatttattg tgtacgcata
    37501 aatgccggac agccgcctaa ataaggtata atcgcatccg attctgtccc gtttgccgcc
    37561 cgcaggcggg atgtcggcgg ttttcatctt accgggaaca cgccggtact gttttttcac
    37621 gatgtttctt acattttatt ccaattactt tacggggcta gaatatggct aaaaacggag
    37681 gattttcttt gttcgcaaag aaagaaaaac gctttatctt tgaaggcagg cattccgcct
    37741 ccgacaaact ggtcaacggc gaagtatccg cgtttaccga agaagaggcg cgcaaaaaac
    37801 tggcaaaacg cggcatccgc ccgttgcaga ttacccgtgt gaaaacaagc tccaagcgca
    37861 aaatcacaca agaagacatc accgttttca cccgccagct ttccacgatg attaaagcgg
    37921 gcctgccgct gatgcaggca tttgaaatcg tggcgcgcgg acacggcaac ccgtctatga
    37981 cggaaatgct gatggaaatc cgaggcgaag tggaacaggg cagctcgttg agccgcgcat
    38041 tctcaaacca cccgaaatat ttcgaccgct tctactgcaa cctggttgcg gcgggcgaaa
    38101 cgggcggcgt attggaaagc ctgctggaca aattggcaat ttacaaagaa aaaacccagg
    38161 ccatccgcaa aaaggtaaaa accgcgctga cctatccggt atccgtcatc gccgtcgcca
    38221 tcggtttggt attcgtgatg atgattttcg tactgcccgc ctttaaagaa gtttacgcca
    38281 atatgggcgc ggagcttccc ccactgaccc aaacagtgat ggatatgtcc gactttttcg
    38341 tctcatacgg ctggatggtg ctgattgcac tgggctttgc catatacggc ttccttaaat
    38401 tgaaggcgcg ttcgattaaa atccaacggc gtatggatgc catactgctg cgtatgccga
    38461 ttttcggaga cattgtccgc aaagggacga ttgcccgctg gggcaggacg acggcgacgc
    38521 tgattgcggc aggcgtgcct ttggtcgatg tattggactc cactgccggc gcggcgggca
    38581 atttaatcta tgaagaagcc acccgggaaa tccgtacgcg cgtcatccaa ggtttgtcta
    38641 tgacttcggg gatgcgtgcg acggaactgt tccccaatat gatgttgcag atgtcttcca
    38701 tcggcgagga atcgggttct ttggacgata tgctcaacaa agccgccgaa ttttacgaag
    38761 acgaggtgga caatgcggtc ggcaggctgt ccgctatgat ggagccgatc attatcgtga
    38821 ttttaggctt ggtcatcggc acgcttctgg tcgccatgta tctgccgctg tttaatttgg
    38881 gcaacgtggt cgcctgattt gccgcacaga tccggcgcgg attcgctctg cgccggtttg
    38941 tttttgtttt gaatacattg agaacaaaat atgtctgatt tgtctgtatt gtcgccgttt
    39001 gccgtgcctt tggcagcggt gttcgggctg ctggtcggca gtttcttaaa tgtcgtcatt
    39061 taccgcgtgc cggtcatgat ggaacgcggc tggacggtat ttgccaaaga atatttaaac
    39121 ctgccgctga ccgaagagga aagccgtacc ttcaacctga tgaaaccgga ttcctgctgt
    39181 cccaaatgcc gcgtgccgat acgcgcgcgg cagaacatcc cgattgtcag ctacctgctc
    39241 ctgcgcggca aatgcgcctc ctgccaaacc aaaatcagca tacgctatcc cttaatcgaa
    39301 ctgctgaccg gcgtattgtt cgggctggtt gcctggcaat acggctggtc ttggattaca
    39361 ttgggcggtt tgatactgac cgcgtttctg atttccctga cctttatcga tgcggacacc
    39421 caatatctgc ccgactcgat gacattatcc ttgatttggc tggggctgat atttaatttg
    39481 gacggcggct tcgtgccttt gcagtctgcc gttttaggtg cggttgccgg ctatggttca
    39541 ttatggctct tatgtgcagt gtataaactg ctcacaagaa aaaccggtat gggcaacgga
    39601 gatttcaaac tgattgccgc attgggcgcg tggctcggca tatccgcatt gcccgtgctg
    39661 atttttgttt cctcgctgat cggtttggtc gcggcaatcg ttatgcgcgt cgccaagggg
    39721 cagcattttg ccttcggccc cgcactgaca gtttcgggct ggataatttt tacggcaaac
    39781 gattccgtat ggcgggcggt caactggtgg ctgacccatc cggtgctgta agatgacggt
    39841 atgggtcgga ctgaccggcg gaatcggcag cggcaaatcg gcagccgcgc aatgttttgc
    39901 cgatttgggc gtaccgcgta tcgatgcgga tgcggcggcg cactcgctga cggcttcaga
    39961 cggcatcgcc ctgccggaaa tcaggcggct gttcggcgac accgttttcg acacacaggg
    40021 tttgttgcga cgcgacatat tgcgtaaaga agtctttgcc tccccatcgc gaaaagcctt
    40081 gctcgaatcc gtgatgttgc cgctgatttt ctcagaaatc aaaaaacagc aagaaacatt
    40141 taacgacgca ccctacggca ttatcgaaat cccactgctg acagaaaaac gtcaattcat
    40201 gaaattgata cagcgcgtgc tgaccataag tgcccctgtg gaaaaacgta tcggcagggt
    40261 gatggcccgc agcgggctga cgcgcggcga ggtggctgcc gtcatcagcc atcaggcatc
    40321 cgaatccgaa cgcctgctgc ttgcagacga tgtgctgctc aatgacggca gcctcaaaag
    40381 cctgcgtgat aaaacaatgc gcctgcacgc gttttattca gggattttcg cctcaaaacc
    40441 aacacaagga aaacacaatg gctgaatcgc ggcaaacacg ccttcaagtc aaatgtccga
    40501 cctgtcaaac agcagtagta tggaaaccgg aaaacgcatt ccgccccttc tgttcgcaac
    40561 gctgcaaact gatcgacttg ggcggatggg cagacgggaa atatacggtt tccagccaaa
    40621 cggaaagttt gccggaaata tccgaacccg acatggcata ccgctgaccg ccccgccttc
    40681 ccggcaaaca ccctgaaagt caaatgccgt ctgaaacaaa cacgcttcag acggcatttt
    40741 cattctcaaa cctaatcgtt ggtatttgcc gttacctctt ccaatgaagt aatgccctgc
    40801 ataactttca aaataccggc ccggcgcaaa tccaccatac cctccttata ggcaacgtcc
    40861 aaaatatcca cttccgtacc gttgttcata atcacacgct gcatttcttc gctgatgggc
    40921 ataacctcat acacgcccgc acgcccctta taaccctgcc cccggcaacg gtcgcaaccg
    40981 acggcgcggt aaagtttcca atcttttgca aggtcctcat cggtgaagcc gacttccttc
    41041 aaagcagagg cagacgggcg ttccacttcc tgtttgcagc tcgaacacag cctgcgtaaa
    41101 agacgctgcg ccataatcag gctgaccgaa ctggcaatat taaacggcgc gacacccata
    41161 ttcagcatac gcgacaacgt cgccggcgca ttattggtgt gcagggtgga aaacaccata
    41221 tgccctgttt gtgccgcctt aatcgcaata tcggcagttt ccaaatcacg aatctcaccg
    41281 accataatga tgtccgggtc ctgacgcagg aaagacttca aagcagcggc aaaagtcaga
    41341 ccctgcttat cattgacgtt aacctgattg atgcccggca ggttaatctc ggcagggtct
    41401 tccgccgttg caatatttac cgactccgta ttcaaaatat tcaaacaggt atagagcgac
    41461 accgtcttac ccgaacccgt cggaccggtt accagcacca tcccgtaggg acggtgaatc
    41521 gcttccaaca acaatttttt ctgaaacggc tcaaaaccga gctggtcgat gttcaaagac
    41581 gcggcatcgg aattcaaaat ccgcatcacg accttttcgc caaacagcgt cggcaatgtg
    41641 ctgacacgga aatcgacagg cttgccgccc ttttgaaagg tcagctgcat cctgccgtcc
    41701 tgcggtatcc gtttttcgga aatgtccaaa cgcgacatta ccttaatccg ggaagcaagc
    41761 tgccccctta ccgcaatggg cggctgaacc acctcgcgga gctgcccgtc cacacggaaa
    41821 cggatacggg cattgtgttc gtaaaactcg aaatggatgt ccgatgcccc gctgcgcaag
    41881 gcatccgaca aagtcttatg gataaacctc ggaacagggc cgtcttctgc ctcctcgttg
    41941 tcgatataca gggtgtggct ttcctcttcc tcctgcccct ccccaagctc ctgaagcagc
    42001 gatgtcgaac gcgaacccac ccaatcgagc aaacccgcca actggtcatc ctcgacaatg
    42061 accaactcaa cctcaatccc tgcggcagaa acggttttct gaatttgcgg catctgtgtc
    42121 ggatcggaaa ccgcaaaaaa tactttgtcg ccccgacgga aaaccggcac acagtggaac
    42181 tccaccatct gctcctccgt caacaccccc atcagcaccc tgtggcgcgg ataatgacgc
    42241 aaatcaagaa tcgaataact gaacaccctc gcaatcaatg ccgcaagcga cttgggcgaa
    42301 atgacaccgt ctgaaaacag catcggcaac acttccttac ccgcctgcga ctcattgtag
    42361 taatgctcgg cctgctcaac agtaaccacc tggttttgaa ccagaatcct cagcaaacct
    42421 acgctcatac gaccttatcc ccaaatttat tcattgttat acctgtacag c
//
LOCUS       DAWKJW010000003        38989 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.003, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000003 DAWKJW010000000
VERSION     DAWKJW010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 38989)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38989)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38989
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.003"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            403..1047
                     /gene="rplC"
                     /locus_tag="WJJ54_000102"
     CDS             403..1047
                     /gene="rplC"
                     /locus_tag="WJJ54_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEZ7341029.1"
                     /translation="MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTD
                     GYTAVQVTFGQKKANRVNKTEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS
                     MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFP
                     GKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA"
     gene            1047..1667
                     /gene="rplD"
                     /locus_tag="WJJ54_000103"
     CDS             1047..1667
                     /gene="rplD"
                     /locus_tag="WJJ54_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEZ7341030.1"
                     /translation="MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANAR
                     SGNRAQKTRAEVKHSTKKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVN
                     RKMYRAGMATILSQLTRDERLFAIEALTAETPKTKVFAEQVKNLGLEQVLFVTKQLDE
                     NVYLASRNLPNVLVLEAQQVDPYSLLRYKKVIITKDAVAQLEEQWV"
     gene            1664..1978
                     /gene="rplW"
                     /locus_tag="WJJ54_000104"
     CDS             1664..1978
                     /gene="rplW"
                     /locus_tag="WJJ54_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEZ7341031.1"
                     /translation="MNQQRLTQVILAPIVSEKSNVLAEKRNQMTFKVLANATKPEIKA
                     AVELLFGVQVASVTTVTTKGKTKRFGRTLGRRSDVKKAYVSLAAGQELDLEAAAAAAD
                     KE"
     gene            1984..2817
                     /gene="rplB"
                     /locus_tag="WJJ54_000105"
     CDS             1984..2817
                     /gene="rplB"
                     /locus_tag="WJJ54_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEZ7341032.1"
                     /translation="MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRN
                     NNGHITTRHKGGGHKHHYRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADGERR
                     YIIAPRGIQAGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGA
                     SAVLLAKEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIRP
                     TVRGVVMNPVDHPHGGGEGRTGEAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNK
                     G"
     gene            2824..3102
                     /gene="rpsS"
                     /locus_tag="WJJ54_000106"
     CDS             2824..3102
                     /gene="rpsS"
                     /locus_tag="WJJ54_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEZ7341033.1"
                     /translation="MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDF
                     IGLTIAVHNGRTHVPVFISDNMVGHKLGEFSLTRTFKGHLADKKAKKK"
     gene            3111..3440
                     /gene="rplV"
                     /locus_tag="WJJ54_000107"
     CDS             3111..3440
                     /gene="rplV"
                     /locus_tag="WJJ54_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEZ7341034.1"
                     /translation="MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGA
                     ELIKKVLESAIANAEHNNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCH
                     INVTVGN"
     gene            3450..4142
                     /gene="rpsC"
                     /locus_tag="WJJ54_000108"
     CDS             3450..4142
                     /gene="rpsC"
                     /locus_tag="WJJ54_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEZ7341035.1"
                     /translation="MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLR
                     QKLANASVGRVVIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPVHVN
                     IEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGA
                     DIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESK
                     QRKAGRRNAAAN"
     gene            4126..4542
                     /gene="rplP"
                     /locus_tag="WJJ54_000109"
     CDS             4126..4542
                     /gene="rplP"
                     /locus_tag="WJJ54_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEZ7341036.1"
                     /translation="MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTA
                     RQIEAARRAMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKV
                     LYEMDGVPEELAREAFELAAAKLPIPTTFVVRQVGQ"
     gene            4542..4733
                     /gene="rpmC"
                     /locus_tag="WJJ54_000110"
     CDS             4542..4733
                     /gene="rpmC"
                     /locus_tag="WJJ54_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEZ7341037.1"
                     /translation="MKANELKDKSVEQLNADLLDLLKAQFGLRMQNATGQLGKPSELK
                     RVRRDIARIKTVLTEKGAK"
     gene            4733..4996
                     /gene="rpsQ"
                     /locus_tag="WJJ54_000111"
     CDS             4733..4996
                     /gene="rpsQ"
                     /locus_tag="WJJ54_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEZ7341038.1"
                     /translation="MSETKNVRTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLST
                     KIHAHDENNQYGIGDVVVISESRPLSKTKSWVVSELVEKARSI"
     gene            5218..5586
                     /gene="rplN"
                     /locus_tag="WJJ54_000112"
     CDS             5218..5586
                     /gene="rplN"
                     /locus_tag="WJJ54_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009124801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEZ7341039.1"
                     /translation="MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVK
                     DAAPRGRVKKGDVYNAVVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPV
                     TRELRTERFMKIVSLAPEVL"
     gene            5598..5921
                     /gene="rplX"
                     /locus_tag="WJJ54_000113"
     CDS             5598..5921
                     /gene="rplX"
                     /locus_tag="WJJ54_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEZ7341040.1"
                     /translation="MNKIIKGDRVVVIAGKDKGKQGQVVRVLGDKVVVEGVNVVKRHQ
                     KPNPMRGIEGGIITKEMPLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNG
                     SIIGA"
     gene            5931..6470
                     /gene="rplE"
                     /locus_tag="WJJ54_000114"
     CDS             5931..6470
                     /gene="rplE"
                     /locus_tag="WJJ54_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEZ7341041.1"
                     /translation="MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAI
                     ADKKVMEHAVSDLEKIAGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDR
                     LITIALPRVRDFRGVSGKSFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTA
                     KTDEEAKALLSLFKFPFKG"
     gene            6473..6778
                     /gene="rpsN"
                     /locus_tag="WJJ54_000115"
     CDS             6473..6778
                     /gene="rpsN"
                     /locus_tag="WJJ54_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEZ7341042.1"
                     /translation="MAKKALINRDLKRQALAKKYAAKRAAIKAVINDSNATEEERFEA
                     RLRFQSIPRNAAPVRQRRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW"
     gene            6794..7186
                     /gene="rpsH"
                     /locus_tag="WJJ54_000116"
     CDS             6794..7186
                     /gene="rpsH"
                     /locus_tag="WJJ54_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEZ7341043.1"
                     /translation="MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEG
                     YIEDFAVSSDVKSILEIQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGIA
                     IVSTSKGVMTDRKARSQGVGGELLCIVA"
     gene            7200..7733
                     /gene="rplF"
                     /locus_tag="WJJ54_000117"
     CDS             7200..7733
                     /gene="rplF"
                     /locus_tag="WJJ54_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEZ7341044.1"
                     /translation="MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIE
                     FNDGKLTFVANNSSKQANAMSGTARALVSNMVKGVSEGFEKRLQLIGVGYRAQAQGKI
                     LNLSLGFSHPIVYEMPEGVSVQTPSQTEIVLTGSDKQVVGQVAAEIRAFRAPEPYKGK
                     GVRYVGEVVVMKEAKKK"
     gene            7747..8100
                     /gene="rplR"
                     /locus_tag="WJJ54_000118"
     CDS             7747..8100
                     /gene="rplR"
                     /locus_tag="WJJ54_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEZ7341045.1"
                     /translation="MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEG
                     DKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAAGVEKVAFDRSGFQYHGR
                     VKALAEAARENGLSF"
     gene            8119..8637
                     /gene="rpsE"
                     /locus_tag="WJJ54_000119"
     CDS             8119..8637
                     /gene="rpsE"
                     /locus_tag="WJJ54_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEZ7341046.1"
                     /translation="MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDG
                     DGRIGMGKGKSKEVPVAVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAK
                     EGSGVKAGGPMRLVFDAMGIHNISAKVHGSTNPYNIVRATLDGLSKLHTPADIAAKRG
                     LTVEDILGVNHG"
     gene            8630..8815
                     /gene="rpmD"
                     /locus_tag="WJJ54_000120"
     CDS             8630..8815
                     /gene="rpmD"
                     /locus_tag="WJJ54_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEZ7341047.1"
                     /translation="MAEQKKIRVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTP
                     ENRGMINKISYLLKVES"
     gene            8817..9251
                     /gene="rplO"
                     /locus_tag="WJJ54_000121"
     CDS             8817..9251
                     /gene="rplO"
                     /locus_tag="WJJ54_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEZ7341048.1"
                     /translation="MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGG
                     FHKVGFEGGQMPLQRRLPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIA
                     STVSNVKVIASGEISKAVALKGIKVTKGARAAIEAVGGKIEM"
     gene            9263..10573
                     /gene="secY"
                     /locus_tag="WJJ54_000122"
     CDS             9263..10573
                     /gene="secY"
                     /locus_tag="WJJ54_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEZ7341049.1"
                     /translation="MANQQTSSGSSKFGDLKKRLLFLFGALIVFRIGAHIPVPGVDAV
                     ALAKLYESAGNGILGILNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKAL
                     KKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQGIVVTSSFEFHVSTVVSLVTG
                     TMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVF
                     GALLLIYLVVYFESAQRKIPIHYAKRQFNGRAGSQNTHMPFKLNMAGVIPPIFASSII
                     LFPSTLLGWFGSADTNSVLHKIAGLLQHGQLLYMALFAATVIFFCYFYTALVFSPKEM
                     AENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLFGALYITTICLIPEFLTTVLNVPFY
                     LGGTSLLILVVVTMDFSTQINSYRLTQQYDKLMTRSEMKSFSRK"
     gene            10578..10796
                     /gene="infA"
                     /locus_tag="WJJ54_000123"
     CDS             10578..10796
                     /gene="infA"
                     /locus_tag="WJJ54_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEZ7341050.1"
                     /translation="MAKEDTIQMQGEILETLPNATFKVKLENDHIVLGHISGKMRMHY
                     IRISPGDKVTVELTPYDLTRARIVFRAR"
     gene            10817..10930
                     /gene="rpmJ"
                     /locus_tag="WJJ54_000124"
     CDS             10817..10930
                     /gene="rpmJ"
                     /locus_tag="WJJ54_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEZ7341051.1"
                     /translation="MRVQPSVKKICRNCKIIRRNRVVRVICTDLRHKQRQG"
     gene            10996..11358
                     /gene="rpsM"
                     /locus_tag="WJJ54_000125"
     CDS             10996..11358
                     /gene="rpsM"
                     /locus_tag="WJJ54_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEZ7341052.1"
                     /translation="MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTK
                     AKDLDETQLDALRDQVAKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRT
                     RTNARTRKGPRKAIAGKK"
     gene            11378..11773
                     /gene="rpsK"
                     /locus_tag="WJJ54_000126"
     CDS             11378..11773
                     /gene="rpsK"
                     /locus_tag="WJJ54_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEZ7341053.1"
                     /translation="MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNAL
                     SWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRAL
                     NALGFKITSITDVTPLPHNGCRPPKKRRI"
     gene            11793..12413
                     /gene="rpsD"
                     /locus_tag="WJJ54_000127"
     CDS             11793..12413
                     /gene="rpsD"
                     /locus_tag="WJJ54_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004282443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEZ7341054.1"
                     /translation="MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAK
                     KPRLSDYGLQLREKQKIRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVV
                     YRMGFGSTRAEARQLVFHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALG
                     LATQIGLPGWVSVDADKLEGVFKNMPDRSELTGDINEQLVVEFYSK"
     gene            12439..13425
                     /gene="rpoA"
                     /locus_tag="WJJ54_000128"
     CDS             12439..13425
                     /gene="rpoA"
                     /locus_tag="WJJ54_000128"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEZ7341055.1"
                     /translation="MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALR
                     RILLSSMNGFAPTEVAIAGVLHEYSTVDGIQEDVVDILLNIKGIVFKLHGRSQVQLVL
                     KKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVV
                     RDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRS
                     AARILIDQMSIFADLQGTPVEEVEEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYY
                     IGDLIQRTETELLKTPNLGRKSLNEIKEVLASKGLTLGSKLEAWPPVGLEKP"
     gene            13449..13817
                     /gene="rplQ"
                     /locus_tag="WJJ54_000129"
     CDS             13449..13817
                     /gene="rplQ"
                     /locus_tag="WJJ54_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEZ7341056.1"
                     /translation="MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHEAIVTTLPKAKEL
                     RRVVEPLITLGKKPSLANRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGF
                     RKGDNAPLALVELVDKPAAE"
     gene            13964..14677
                     /gene="minC"
                     /locus_tag="WJJ54_000130"
     CDS             13964..14677
                     /gene="minC"
                     /locus_tag="WJJ54_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HEZ7341057.1"
                     /translation="MMVYIMNAFDIKSTKMDVLSISLHTSDLFDLEDVLVKLGKKFQE
                     SGVVPFVLDVQEFDYPESLDLAALVSLFSRHGMQILGLKHSNERWAAAAMKYHLLFCL
                     SHSENVKELGQVEVQNTEDGQKARKTVLITSPVRTGQQVYAEDGDLIVTGAVSQGAEL
                     IADGNIHIYAPMRGRALAGAKGDTSARIFIHSMQAELVSVAGIYRNFEQDLPNHLHKQ
                     PVQILLQDNRLVISAIGSE"
     gene            14705..15520
                     /gene="minD"
                     /locus_tag="WJJ54_000131"
     CDS             14705..15520
                     /gene="minD"
                     /locus_tag="WJJ54_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HEZ7341058.1"
                     /translation="MAKIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLR
                     NLDLIMGCERRVVYDLINVIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREGV
                     EKVMQELSGKKMGFEYIICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILG
                     ILQSKSHKAEQGGSVKEHLLITRYSPERVAKGEMLSVQDICDILHIPLLGVIPESQNV
                     LQASNSGEPVIHQDSVAASEAYKDVIARLLGENREMRFLEAEKKSFFKRLFGG"
     gene            15524..15787
                     /gene="minE"
                     /locus_tag="WJJ54_000132"
     CDS             15524..15787
                     /gene="minE"
                     /locus_tag="WJJ54_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HEZ7341059.1"
                     /translation="MSLIEFLFGRKQKTATVARDRLQIIIAQERAQEGQAPDYLPTLR
                     KELMEVLSKYVNVSLDNIRISQEKQDGMDVLELNITLPEQKKV"
     gene            15791..16711
                     /gene="oxyR"
                     /locus_tag="WJJ54_000133"
     CDS             15791..16711
                     /gene="oxyR"
                     /locus_tag="WJJ54_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator OxyR"
                     /protein_id="HEZ7341060.1"
                     /translation="MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELA
                     VSLFDRSSNDIITTEAGERIVAQARKVLEEAELIRHLANEEQNELEGAFKLGLIFTVA
                     PYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPL
                     YDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQ
                     GLTNTLQGSSINTIRHMVASGLAISVLPATALTENDHMLFSIIPFEGTPPSRRVVLAY
                     RRNFVRPKALSAMKAAIMQSQLHGVSFIRD"
     gene            complement(16708..16899)
                     /locus_tag="WJJ54_000134"
     CDS             complement(16708..16899)
                     /locus_tag="WJJ54_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341061.1"
                     /translation="MLIHYTWHCIGTDENIHSDAKVEYLQDGSFRGDAILKIDDDGNI
                     LAYRVVGSGKWRFENNACA"
     gene            17285..17674
                     /locus_tag="WJJ54_000135"
     CDS             17285..17674
                     /locus_tag="WJJ54_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ7341062.1"
                     /translation="MRYTIKTFQTLADETFPSKNFKILSFNGVARPITIVCPTHGVQT
                     VSAGQAFIRSKHGCPACGLVLSTSVLASRGRSVSILDTATGETLSFPSVQAAAKALNT
                     SYGSIRTKLDGRSSPDNLVCNRYKVMP"
     gene            complement(18045..20882)
                     /locus_tag="WJJ54_000136"
     CDS             complement(18045..20882)
                     /locus_tag="WJJ54_000136"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEZ7341063.1"
                     /translation="MLDKYNPAEIESKHYQNWESQGYFQPDMDLTKPSFSIQLPPPNV
                     TGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRH
                     DLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAETVTEVFVRLY
                     EQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPLADNPAEAVIVATTRP
                     ETLLGDVAVAVNPEDERYTHLIGKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAH
                     DFNDYEVGKRHDTRLVNVFDLEAKVLANAEVFNFKGEAQPSFALPEKYAGLDRFAARK
                     QMVADLQEQGFLVEIKAHTLMTPKGDRTGSVIEPMLTSQWFVAMSATPNGGEPDSEFK
                     GLSLADKAKKAVDSGAVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDNEG
                     NVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAFLPSNV
                     LVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVIDPVDL
                     IDGIDLEKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASLGR
                     SVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCGYGATATEPRGYSFPDMWIIGRL
                     NQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKVQLQTGCASRQRATRHTL
                     LRVLEAALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLARFPEADGGDIVQTAFEQ
                     MTVLQDLIGAVRNLRGEMGIQPNVKAPLFVESADDLADYLKYLPMMTRLTEARQVAAL
                     PESEDAPVAVCNGARLMLKVEIDKAAETARLSKEAEKLQKALDKLNAKLSKPGYTEKA
                     PAHLVEKDKADLAELEDKMAKVQTQLSKLKD"
     gene            complement(20979..21788)
                     /gene="zupT"
                     /locus_tag="WJJ54_000137"
     CDS             complement(20979..21788)
                     /gene="zupT"
                     /locus_tag="WJJ54_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HEZ7341064.1"
                     /translation="MPDFSMSNLAVAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFG
                     LAFAGGAMVYVSLTEIFSKSSEAFAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNP
                     HETLDAQDPSFQESKRRHIARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLALA
                     IAIHNIPEGISIAAPVYFATRSRKKTVWACLLSGLAEPLGAALGYLVLQPFLSPAVFG
                     SVFGVIAGVMVFLALDELLPAAKRYSDGHETVYGLTMGMAVIAVSLVLFHF"
     gene            complement(21969..23225)
                     /locus_tag="WJJ54_000138"
     CDS             complement(21969..23225)
                     /locus_tag="WJJ54_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HEZ7341065.1"
                     /translation="MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANA
                     GQLSYGYTTPWAAPGIPTKALKWLFKSHPPLLFRPDGSLYQIEWLWRMLQNCTASRYQ
                     INKERMVRMSEYSREMFRRFEAQTGMNFEGRKKGTLQVFRQTKEVEAAKQDIAVLERY
                     GVPYRRLKPEECAEFEPALARVTAKIAGGLHLPADATGDCHLFTENLYKLCQEKGVQF
                     HFNQTISRIDHNGLRIKAVETETGRFEADAVVCALGCFSRTVLAQLDLDLPIYPVKGY
                     SLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGYEIKLPEKRRETLAL
                     VVNDLFPEGGDLSQALFWSGLRPMTPDSTPLIGRTRFENLFLNTGHGTLGWTMSLGSA
                     KLTADIVSGKDTEIRSDDLSLSRYQA"
     gene            complement(23304..24695)
                     /locus_tag="WJJ54_000139"
     CDS             complement(23304..24695)
                     /locus_tag="WJJ54_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ7341066.1"
                     /translation="MQLFLDNLKAFFETVSGWVWGSVMLMLLVGTGIVLTVMLKGLQF
                     TMLGYALKQAFVPSKKHEDGEDHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGP
                     GAVFWMWITAIFGMATKYGEGVLAVKYRVTNSKGEMSGGPMYYIENGLGKNWKWMAVA
                     FALFGTLASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKA
                     ASFIVPAMAVFYVLGGLSIIAINSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVA
                     RGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVCSITGIILVMGLLGA
                     GGEFVKPELSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVF
                     GEKFAGLYRVGYVSSVMLGTVLSLDLVWLASDTFNGLMALPNLIALLLMAKVIVNETR
                     DFKQKITNGELPH"
     gene            complement(25052..25828)
                     /gene="lpxA"
                     /locus_tag="WJJ54_000140"
     CDS             complement(25052..25828)
                     /gene="lpxA"
                     /locus_tag="WJJ54_000140"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEZ7341067.1"
                     /translation="MTLIHPTAVIDPKAELDSGVKVGAYTVIGPNVQIGANTEIGPHA
                     VINGHTSIGENNRIFQFASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGI
                     GETRIGDDNWIMAYCHLAHDCVVGNHTIFANNASLAGHVTVGDYVVLGGYTLVFQFCR
                     IGDYAMTAFAAGVHKDVPPYFMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTL
                     YHRGIPFEEAKADILRRAETQAELAVFRDFFAQSARGIIR"
     gene            complement(25915..26364)
                     /gene="fabZ"
                     /locus_tag="WJJ54_000141"
     CDS             complement(25915..26364)
                     /gene="fabZ"
                     /locus_tag="WJJ54_000141"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEZ7341068.1"
                     /translation="MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVT
                     INEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKR
                     QVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEAIIMCAKRVV"
     gene            complement(26400..27443)
                     /gene="lpxD"
                     /locus_tag="WJJ54_000142"
     CDS             complement(26400..27443)
                     /gene="lpxD"
                     /locus_tag="WJJ54_000142"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEZ7341069.1"
                     /translation="MIPATYTLSQITARLGGEWRGEDISVTAVRPLADAQAEHISFLA
                     NPKYKAEVHDSSAGAVIVSAKAADGFEGRNLIVADDPYLYFAKVARLFSPVVKARGGI
                     HPTAVVEPSATVPANCEIGANAYIGANTVLGEGCRILANAVVQHDCKLGDEVVLHPNA
                     VVYYGCTLGRRVEIHSGAVIGADGFGLAFAGDSWFKIPQTGAVTLGDDVEIGSNTNID
                     RGAMSDTTVGNGTKIDNQVQIGHNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTV
                     GHIEIADKTTIGGGTSVTHSITESGKHLAGIFPMSTHKEWARNAVYIHRLSEMNKRLK
                     TLEQQLSDGKDTQ"
     gene            complement(27476..27976)
                     /locus_tag="WJJ54_000143"
     CDS             complement(27476..27976)
                     /locus_tag="WJJ54_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HEZ7341070.1"
                     /translation="MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQA
                     RKIQKTLDSEFSARQDELQKLQREGLDLERQLAEGKLRNAKKAQAEEKWRGLVAAFRK
                     KQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVI
                     KEMNAR"
     gene            complement(28042..30435)
                     /gene="bamA"
                     /locus_tag="WJJ54_000144"
     CDS             complement(28042..30435)
                     /gene="bamA"
                     /locus_tag="WJJ54_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEZ7341071.1"
                     /translation="MKLKQIASALMVLGISPLALADFTIQDIRVEGLQRTEPSTVFNY
                     LPVKVGDTYNDTHGSAIIKSLYATGFFDDVRVETADGQLLLTVIERPTIGSLNITGAK
                     MLQNDAIKKNLESFGLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARN
                     RVDIDITIDEGKSAKITDIEFEGNQVYSDRKLMRQMSLTEGGIWTWLTRSNQFNEQKF
                     AQDMEKVTDFYQNNGYFDFRILDTDIQTNEDKTKQTIKITVHEGGRFRWGKVSIEGDT
                     NEVPKAELEKLLTMKPGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAETKT
                     VDFVLHIEPGRKIYVNEIHITGNNKTRDEVVRRELRQMESAPYDTSKLQRSKERVELL
                     GYFDNVQFDAVPLAGTPDKVDLNMSLTERSTGSLDLSAGWVQDTGLVMSAGVSQDNLF
                     GTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDVYGKAFDPRKASTSIKQYKT
                     TTAGAGIRMSVPVTEYDRVNFGLVAEHLTVNTYNKAPKHYADFIKKYGKTDGTDGSFK
                     GWLYKGTVGWGRNKTDSALWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWFFPLSKT
                     FTLMLGGEVGIAGGYGRTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGDKISYG
                     GNKKANVSAELLFPMPGAKDARTVRLSLFADAGSVWDGKTYDDNSSSATGGRVQNIYG
                     AGNTHKSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLGTTF"
     gene            complement(30492..31832)
                     /gene="rseP"
                     /locus_tag="WJJ54_000145"
     CDS             complement(30492..31832)
                     /gene="rseP"
                     /locus_tag="WJJ54_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEZ7341072.1"
                     /translation="MHTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPF
                     FTRKRGDTEWCLAPIPLGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLT
                     NLALAVLLYGLSFSFGVTELRPYVGTVEPDTIAARAGFQSGDKIQSVNGTPVADWGGA
                     QTEIVLNLEAGKVAVGVQTASGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVA
                     GGVEKGSPAEKAGLKPGDRLTAADGKPIASWQEWANLTRQSPGKKITLTYERAGQTHT
                     ADIRPDTVEQSDHTLIGRVGLRPQPDRAWDAQIRRSYRPSVIRAFGMGWEKTVSHSWT
                     TLKFFGKLISGNASVSHISGPLTIADIAGQSAELGLQSYLEFLALVSISLGVLNLLPV
                     PVLDGGHLVFYTAEWIRGKPLGERVQNIGLRFGLALMMLMMAVAFFNDVTRLLG"
     gene            complement(31867..33102)
                     /locus_tag="WJJ54_000146"
     CDS             complement(31867..33102)
                     /locus_tag="WJJ54_000146"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEZ7341073.1"
                     /translation="MPSENASDGIRYKVIPIMTPQVLTILGSTGSIGESTLDVVSRHP
                     EKFRVFALAGHKQVEKLAAQCQTFRPEYAVVADTEHAARLEALLKHDGTATQVLHGAQ
                     ALVDVASADEVGGVMCAIVGAAGLPSALAAAQKGKTIYLANKETLVVSGALFMETARA
                     NSAAVLPVDSEHNAVFQVLPRDYTGRLNEHGIRSIILTASGGPFLTTDLNTFDSITPD
                     QAVKHPNWRMGRKISVDSATMMNKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRY
                     RDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGDLDFDALSALTFQKPDFDRFPCLKL
                     AYEAMNAGGVAPCVLNAANEAAVAAFLDGQIKFTDIAKTVAHCLSQDFSDGIGDIGGL
                     LAQDARTRAQARAFIGTLR"
     gene            complement(33107..33904)
                     /locus_tag="WJJ54_000147"
     CDS             complement(33107..33904)
                     /locus_tag="WJJ54_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEZ7341074.1"
                     /translation="MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALIALWEYA
                     RMSGLCKIKTNHYLAATLVFGVVAYAGGWMLPNLVWYVVLAFWLAIMPLWLRFKWRLN
                     GGWQVYAVGWLLVMPFWFALVSLRPHPDDALPLLAVMGLVWVADVFAYFSGKAFGKHK
                     IAPAISPGKSWEGAIGGAVCVAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGD
                     LLESWLKRAAGIKDSSNLLPGHGGVFDRTDSLIAVISVYAAMMSVLN"
     gene            complement(33907..34653)
                     /locus_tag="WJJ54_000148"
     CDS             complement(33907..34653)
                     /locus_tag="WJJ54_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEZ7341075.1"
                     /translation="MKSSTQAVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGL
                     DALENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNM
                     RLKILGSRERFNRQILQGIEEAETLTANNTGLTLSIAADYGGRWDILQAANKLIAEGV
                     SEITEDTLAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGK
                     ALDDAVASFQKRERRFGRTSEQLPIEQQRN"
     gene            complement(34709..35266)
                     /gene="frr"
                     /locus_tag="WJJ54_000149"
     CDS             complement(34709..35266)
                     /gene="frr"
                     /locus_tag="WJJ54_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEZ7341076.1"
                     /translation="MINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEY
                     WGSMVPVSQVANVTLLDARTIGVKPFEGNMAVKVEKAIRDSNLGLNPAAVGDLIRVPM
                     PMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAV
                     QKLTDKYITEADKLLTAKEEDLMAI"
     gene            complement(35446..36573)
                     /locus_tag="WJJ54_000150"
     CDS             complement(35446..36573)
                     /locus_tag="WJJ54_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEZ7341077.1"
                     /translation="MNTSQRNRLSSRWLNSYERYRYRRLIHSVRLGGAVLFATALARL
                     FHLQHGEWIGMTVFVVLGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHDN
                     LLFYLTVGTASALAGWAAVGKNGYVPMLAGLTMCMLIGDNGSEWLDSGLMRAMNVLIG
                     AAIAIAAAKLLPLKSTLMWRFMLADNLTDCSKMIAEISNGRRMTRERLEENMAKMRQI
                     NARMVKSRSHLAATSGESRISPAMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSE
                     IRLLDRHFTLLQTDLQQTVALINGRHARRIRIDTAINPELEALAEHLHYQWQGFLWLS
                     TNMRQEISALVILLQRTRRKWLDAHERQHLRQSLLETREHG"
     gene            complement(36647..36722)
                     /locus_tag="WJJ54_000151"
     tRNA            complement(36647..36722)
                     /locus_tag="WJJ54_000151"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36687..36689),aa:Thr,seq:cgt)
     gene            36827..37312
                     /locus_tag="WJJ54_000152"
     CDS             36827..37312
                     /locus_tag="WJJ54_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341078.1"
                     /translation="MYVNEKYPYAALFAGLVFLTLPFALSVHDALAFAFGRTGLLVSV
                     SDGGFGWRGGWDSTVWFVFGVFAFLNVVVSAGLTKLAYKKMMRRHSRYALFLSGVAAC
                     AAAAVAWIFELLLGSAALGGLRGEAVLEYAFAVWLVAMLTLPKRLTRAPVQLVVFHRK
                     K"
     gene            37408..38031
                     /gene="rsmG"
                     /locus_tag="WJJ54_000153"
     CDS             37408..38031
                     /gene="rsmG"
                     /locus_tag="WJJ54_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEZ7341079.1"
                     /translation="MERKERLQSGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTA
                     LRDEEKMIVHHLLDSLTLLPYIEGAQTMLDVGSGGGQPGIPAAVCRPDVQITLLDANT
                     KKTAFLQQAVIELGLDNVRVVSGRVEAVSDVRADVITSRAFAELADFVSWTAHLLKDG
                     GYWAAMKGVYPQGEIDHLPQDVCVEKVQRLDVPGLDAERHIVILRKR"
     gene            38130..38903
                     /locus_tag="WJJ54_000154"
     CDS             38130..38903
                     /locus_tag="WJJ54_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEZ7341080.1"
                     /translation="MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQG
                     NATTGSGIDKAGLQSGVYQVLLGDADVKSATVRSKEGGYAVLGANRALAGAEIELVQE
                     IAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
                     DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETAIPRNI
                     RLAEAPSHGMPVMAYDAQAKGTKAYLALADELMARVSGK"
BASE COUNT         9126 a         8794 c        10765 g        10304 t
ORIGIN      
        1 gtttgggtag aattaggaga tatttggggc gaaaacagcc gaaaacctgt gtttgggttt
       61 cggctgtcgg gagggaaagg aattttgcaa aggtcccagc atacgaaaac taccatctca
      121 aagaaataat ggatgcagtc atcaaccata ttccggtttg tcggagaaag atgcatacgc
      181 tgtgatgacc ggataccgac cctttaaaag agtccggccc tatgccgtct gaagattcaa
      241 aacgcttcag acggcatatt gaagatattt ctgatatttc tgttgatatt tctttgactt
      301 gtcagatata atgccgagct tggtacattt gtgccaagtt taactttgtc tgaaagacag
      361 gccaatcgta gcctgtccct ttactttaaa aggaaaataa tcatgacttt aggtctggtt
      421 ggacgcaaag ttggtatgac ccgcgtgttc gacgaacagg gtgtttctgt tccggtaacc
      481 gttttggata tgtctgccaa ccgcgttaca caagtaaaat ccaaagatac tgacggctat
      541 actgccgttc aagttacctt tggtcagaaa aaagccaatc gtgtcaacaa aaccgaagcc
      601 gggcactttg caaaagcagg tgttgaagcc ggtcgtggtt tgatcgagtt tgctttgact
      661 gaagaaaaac tggctgaatt gaaagccggt gacgaaatca ccgtttctat gtttgaagtc
      721 ggccagctgg tcgatgtaac cggtacctct aaaggtaaag gtttctccgg cacgatcaaa
      781 cgtcataact tcggtgccca acgcacttcc cacggtaact cccgttctca ccgcgttcca
      841 ggctctatcg gtatggcgca agacccgggt cgcgtgttcc ccggtaagcg catggccggc
      901 caatacggca acaccaaagc aactgttcaa aaattggaag ttgtccgtgt tgatgcagaa
      961 cgccaactgc tgttggttaa gggtgctgtt ccgggtgcgg tcaacagcga tgttgtagtt
     1021 cgtcctagcg tgaaagtagg tgcgtaatgg aattgaaagt aattgacgct aaaggacaag
     1081 tttcaggcag cctgtctgtt tctgatgctt tgttcgcccg cgaatacaat gaagcgttgg
     1141 ttcatcagct ggtaaatgcc tacttggcaa acgcccgctc cggtaaccgc gctcaaaaaa
     1201 cccgtgccga agtaaaacac tcaaccaaaa aaccatggcg tcaaaaaggt accggccgtg
     1261 cccgttccgg tatgacttct tctccgctgt ggcgtaaagg tggtcgcgcg ttcccgaaca
     1321 aacccgacga aaacttcact caaaaagtaa accgcaaaat gtaccgtgcc ggtatggcga
     1381 ctattctgtc tcaattgact cgtgacgagc gtttgtttgc gattgaggcg ttgactgccg
     1441 aaactcctaa aaccaaagtt tttgctgaac aagtgaaaaa tctgggtctg gagcaagtgt
     1501 tgtttgtaac caaacagctc gacgagaatg tttacttggc ttcacgcaac ttgccaaacg
     1561 tgttggtttt ggaagctcaa caagttgatc cttacagctt gctgcgttac aaaaaagtaa
     1621 tcatcactaa agatgcagtt gcacaattag aggagcaatg ggtatgaatc aacaacgttt
     1681 gactcaagtg attttggcac ctatcgtttc tgaaaaaagc aacgtattgg ctgaaaaacg
     1741 caaccaaatg acgtttaaag ttttggcaaa tgcaaccaaa cctgaaatca aagcggctgt
     1801 tgagctgctg tttggtgttc aagttgcttc tgtaactacc gttacaacta aaggcaaaac
     1861 taagcgtttt ggtcgtactt tgggccgccg cagcgatgtt aaaaaagctt atgtaagctt
     1921 ggctgccggt caagagttgg atttggaagc cgctgctgca gctgcagata aggaataaac
     1981 aaaatggcaa tcgttaaaat gaagccgacc tctgcaggcc gtcgcggcat ggttcgcgtg
     2041 gtaacagaag gtttgcacaa aggtgcacct tatgcgccct tgcttgaaaa gaaaaattct
     2101 actgccggcc gtaacaataa tggtcatatc accacccgtc acaaaggcgg cggtcataaa
     2161 caccattacc gtgttgtaga ctttaaacgt aacaaagacg gcattcctgc caaagtagag
     2221 cgtatcgaat acgatcctaa ccgtactgcc ttcatcgcac tgttgtgcta tgcagacggc
     2281 gagcgtcgtt acatcattgc tcctcgcggt attcaagccg gtgctgtatt ggtttccggt
     2341 gctgaagctg ccatcaaagt aggcaacacc ctgccgattc gcaacattcc cgttggtacg
     2401 actatccact gtatcgaaat gaaacccggt aaaggtgctc aaatcgcacg ttctgccggt
     2461 gcttctgcgg tattgctggc taaagaaggc gcgtacgctc aagtccgtct gcgctctggc
     2521 gaagtccgta aaatcaacgt aaattgccgt gcgaccattg gtgaagttgg taacgaagag
     2581 caaagcctga aaaaaatcgg taaagccggt gccaaccgtt ggcgcggtat tcgtccgacc
     2641 gtacgcggtg ttgtcatgaa tcctgtcgat cacccgcatg gtggtggtga aggccgtacg
     2701 ggcgaggccc gcgaaccggt cagcccatgg ggtactcctg ctaaaggcta ccgcactcgt
     2761 aataacaaac gcacggataa catgattgtt cgtcgccgtt actcaaataa aggttaattt
     2821 agtatggctc gttcattgaa aaaaggccca tatgtagacc tgcatttgct gaaaaaagta
     2881 gatgctgctc gcgcaagcaa cgacaaacgc ccgattaaaa cctggtctcg tcgttctacc
     2941 attctgcctg attttatcgg tctgaccatt gctgtgcaca acggccgcac ccatgtgcct
     3001 gtgtttatca gcgacaatat ggttggtcat aaattaggcg aattctcatt gacccgtacc
     3061 tttaaaggcc acttggccga taaaaaggct aaaaagaaat aaggtgaatc atgagagtaa
     3121 atgcacaaca taaaaatgcc cgtatctctg ctcaaaaggc tcgtttggta gctgatttga
     3181 ttcgtggtaa agacgttgcc caagctttga atattttggc tttcagtcct aaaaaaggtg
     3241 ccgagctgat taaaaaagta ttggagtcag ctattgctaa tgccgagcac aataacggtg
     3301 cggacattga tgaactgaaa gtggtaacta tctttgttga caaaggccca agcttgaaac
     3361 gttttcaagc tcgcgccaaa ggtcgcggta accgcatcga aaaacaaact tgtcatatca
     3421 atgtgacagt gggtaactaa ggaaaagcta tgggacaaaa gattaaccct acaggctttc
     3481 gcctggcggt aactaaagac tgggcttcaa aatggtttgc taaaagcacc gacttttcta
     3541 ctgttttgaa gcaggatatc gatgttcgca attatttgcg tcaaaaattg gccaatgctt
     3601 cggttggtcg agtggttatt gaacgccctg caaaatctgc acgcattacc attcactccg
     3661 ctcgtccggg tgtggttatc ggtaaaaaag gtgaggatat cgaggttttg aaacgtgact
     3721 tgcaagtctt gatgggtgta cctgttcatg taaatattga agagattcgc cgtcctgagt
     3781 tggatgctca aattattgct gacggtattg cccagcagtt ggaaaagcgc gttcaattcc
     3841 gtcgtgctat gaaacgagca atgcaaaatg caatgcgttc tggtgctaaa ggcattaaga
     3901 ttatgacttc aggccgtctg aatggtgcgg atattgcccg tagcgaatgg tatcgtgaag
     3961 gtcgcgtgcc actgcatact ttacgtgcaa atgtagatta tgcaaccagc gaagcgcaca
     4021 ccacatatgg tgtattgggt ctgaaagttt gggtttatac ggaaggcaat attaaatctt
     4081 ccaaacctga acatgagagt aaacaaagaa aggcaggtag acgtaatgct gcagccaact
     4141 agactgaaat accgtaagca acaaaagggt cgcaatactg gcatcgctac tcgcggtaat
     4201 aaggtaagtt tcggtgagtt cggcttgaaa gccgtaggtc gtggtcgttt gactgcccgt
     4261 caaatcgaag ctgctcgtcg tgcaatgacc cgtcatatca aacgtggtgg tcgtatttgg
     4321 attcgtgtat tccctgataa accgattact gaaaagccta ttcaagttcg tatgggtggc
     4381 ggtaaaggta acgtggaata ttacattgcc gaaattaaac caggtaaagt gttgtatgaa
     4441 atggatggcg ttccagagga actggctcgt gaagcattcg agttggctgc tgccaaattg
     4501 cctattccta caacctttgt agtaagacag gtgggtcaat aatgaaagca aatgaattga
     4561 aagacaaatc cgttgagcag ttgaatgcag atttgttgga cttgttgaaa gctcagtttg
     4621 gcttacgtat gcaaaacgct accggtcaat taggcaaacc aagtgaattg aaacgtgtac
     4681 gtcgcgatat tgctcgtatt aaaaccgttt taactgaaaa aggtgctaag taatgagcga
     4741 aactaaaaat gttcgtactt tgcaaggcaa agtagtaagc gacaaaatgg ataaaaccgt
     4801 aacagtattg gttgagcgta aagtaaaaca tccgctgtat ggtaagatta ttcggttatc
     4861 tactaaaatc catgcccatg atgaaaataa tcaatatgga attggtgatg tggttgttat
     4921 atcggaatcc cgtccattgt caaaaactaa atcttgggtt gtcagtgagc tggttgagaa
     4981 agcacgttct atttaagaat taaagcaacg tgcttggaat gggaaacgaa gtattgcagc
     5041 aaatttaatt tgcgtgtaaa cttcgtttcc tgtctttcag tttcttctgg aagtttcttc
     5101 cctttcgggg tccaagactg gtttacttga accgcaaggt ttcatttaat aagcagcggc
     5161 tttgctgtaa gttatctgaa agtggtaaat taagttggtt aatttaaagg taataacatg
     5221 attcaaatgc agaccatctt agatgtggct gataactctg gtgcgcgtcg cgtaatgtgt
     5281 atcaaggtat tgggcggatc taagcgtcgc tacgcttctg ttggcgatat tattaaagtg
     5341 gcagttaaag atgcggctcc gcgtggccgt gtcaaaaaag gcgatgtata taatgcggta
     5401 gttgttcgta ctgctaaggg tgtacgtcgt cctgatggtg cgttaattaa attcgataac
     5461 aatgccgccg tgttactgaa taataaactt gaacctttgg gtactcgtat ctttggtccg
     5521 gtaacccgtg aattgcgtac tgagcgattt atgaaaatcg tttcattggc acctgaagta
     5581 ttataaggaa tggcacgatg aataaaatca ttaaaggcga tagggttgta gtaattgctg
     5641 gtaaggataa aggtaagcag ggtcaagtag ttcgagtgtt gggtgataaa gttgttgttg
     5701 agggcgttaa tgttgtaaaa cgccatcaaa aacctaatcc aatgcgtggc attgagggcg
     5761 gtattattac taaagaaatg cctttggata tttctaatat cgcaatcctg aatccggaaa
     5821 ctaataaagc ggaccgtgtt ggtattaagc tgattgaaaa tgaaggcaaa gttaaacgcg
     5881 ttcgtttctt caaatcaaat ggctctatca ttggggcata aggagataac atggctcggt
     5941 tgagagagtt ttataaagag acagttgttc ctgaattggt taaacaattt ggttacaaat
     6001 cagtaatgga agtcccgcgt attgaaaaaa tcaccttgaa tatgggtgtg ggtgaggcta
     6061 ttgctgataa aaaagttatg gaacatgctg tttccgattt agagaaaatt gccggtcaaa
     6121 aaccggttgt tactgttgcc cgtaaatcta tcgcaggttt taaaatccgt gataactatc
     6181 cggttggttg caaagtaaca ttgcgtcgtg atcaaatgtt tgaattcttg gatcgtttga
     6241 ttactattgc attacctcgc gtacgtgact tccgtggtgt gagcggtaaa tcatttgatg
     6301 gccgtggcaa ttacaatatg ggtgttcgtg agcaaattat ttttccggaa attgaatacg
     6361 ataaaattga tgctttgcgt ggtttgaata ttactattac tactacagca aaaaccgatg
     6421 aggaagcgaa agctttattg tcattgttta aatttccgtt caaaggataa tcatggctaa
     6481 gaaagcactt attaatcgtg atctgaaacg tcaagctttg gctaaaaaat atgcggctaa
     6541 acgcgcggca attaaagcgg taatcaatga ttcgaatgca actgaggaag agcgttttga
     6601 ggctcgtttg aggtttcaat ccattcctcg taatgcggca cctgtgcgtc aacgtcgtcg
     6661 ttgtgctttg acaggtcgcc ctcgtggtac tttccgtaaa tttggtttgg gtcgtattaa
     6721 aatccgtgaa atcgccatgc gtggcgaaat tccgggtgtt gttaaagcca gctggtaata
     6781 ggagtaatta agaatgagta tgcatgatcc tatttccgat atgttgactc gtatccgcaa
     6841 tgcgcaacgt gctaataaag cagcggttgc aatgccttct tcaaaattaa agtgtgctat
     6901 tgcaaaggta ttgaaagaag aaggatatat tgaggacttc gcagtttcat ctgacgtaaa
     6961 gtctatattg gaaattcaat taaaatacta tgcaggtcgt cctgtaattg aacaaatcaa
     7021 gcgtgtatct cgccctggtt tgcgtattta taaagcgtct agtgagattc caagtgttat
     7081 gaatggcttg ggtattgcta ttgttagtac ttctaaaggt gtaatgactg atcgtaaagc
     7141 acgttctcaa ggtgttggtg gtgagttgtt atgcattgta gcctagtgga ggaaaagaaa
     7201 tgtcacgtgt cgcaaaaaac ccagtgactg ttcccgctgg tgtagaagta aaatttggaa
     7261 cagaggcatt agttattaag ggtaagaacg gtgaattgtc ttttcctttg cattctgatg
     7321 tagccattga atttaatgat ggcaaattga cttttgttgc gaataacagc agtaaacaag
     7381 caaatgcaat gtctggtact gctcgcgcat tagtcagcaa tatggttaaa ggtgtttcag
     7441 aaggttttga gaaaagattg caattgatag gtgtgggtta tcgtgctcaa gcacaaggta
     7501 aaatcttgaa tctgtctttg ggtttttctc atccgatcgt atatgaaatg cctgaaggtg
     7561 tctccgttca aactcctagc caaacagaga ttgttttaac cggctcggat aaacaagttg
     7621 ttggtcaagt tgctgctgag attcgtgcgt tccgtgctcc tgagccttat aaaggtaaag
     7681 gtgttcgcta tgtaggcgaa gtagtggtaa tgaaagaagc caagaaaaaa taattgaggt
     7741 tcactaatgg ataaacatac aacccgactc cgtcgtgcac gcaaaacccg tgctcgtatt
     7801 gcggacttga aaatggtaag attatgtgtg ttccgaagca ataatcatat ttatgctcaa
     7861 gtaattagtg ctgaaggtga taaagtattg gctcaagcct ctacattgga agctgaggtg
     7921 cgcggtagtc tgaaatctgg aagcaatgtt gaagcagctg caatagttgg taaacgtatc
     7981 gctgagaagg ctaaagcagc aggtgtagaa aaggttgctt ttgatcgttc aggtttccaa
     8041 tatcacggtc gtgtgaaggc tttggctgaa gctgctcgtg aaaatggttt aagcttctaa
     8101 atatttggag actttcagat ggcaaaacat gaaattgaag aacgcggtga cggtctgatt
     8161 gaaaagatgg tcgcagttaa ccgtgtaacc aaagtagtta aaggtggtcg cattatggct
     8221 ttctctgcgc taactgttgt tggtgatgga gatggtcgta ttggtatggg taaaggtaag
     8281 tcaaaagaag tgcctgttgc agtccaaaag gcgatggatc aagcacgacg ctctatgatt
     8341 aaggtaccat taaaaaatgg tacgattcat catgaggtta ttggtcgaca tggtgctact
     8401 aaagtattta tgcagcctgc taaagagggt agtggcgtaa aagccggtgg acctatgcgt
     8461 ttggtttttg atgctatggg cattcataat atctccgcca aagtgcacgg atctactaac
     8521 ccatataata tcgtacgtgc aacattagat ggtttgtcta agttgcatac tcctgctgat
     8581 atcgcagcca aacgtggctt gacagtggaa gacattttgg gagttaacca tggctgaaca
     8641 aaaaaagatt agggttacat tggttaaaag cctgattggt acaattgaat ctcatcgtgc
     8701 atgtgcacgc ggtttaggtt tgcgtcgtcg cgagcatacg gtagaggttt tagatacccc
     8761 tgaaaaccgt ggtatgatta ataaaatcag ctacttgttg aaagtggagt cttgatatgt
     8821 ttttgaatac aattcaacct gctgttggtg ctacgcatgc tggtcgtcgt gttggacgcg
     8881 gtattggtag tggtcttggc aaaacgggtg gtcgtggtca taaaggtcaa aagagccggt
     8941 ctggtgggtt tcataaggtg ggtttcgagg gtggtcaaat gcccttgcaa cgacgcctcc
     9001 ctaaaagagg ttttaaatct ttaacagcat cagctaatgc acagcttcgt ttaagtgaac
     9061 tggaatcaat tgctgttaat gagattgata ttttggtctt aaagcaagcg ggtctgattg
     9121 catctacagt ctctaatgtt aaagttattg cttctggtga aatttctaag gcagttgctt
     9181 tgaagggtat taaagttacc aaaggtgcga gagctgctat cgaggctgtt ggtggtaaga
     9241 ttgaaatgta aggtttaata ttgtggctaa tcaacaaacg tcatcaggtt catccaaatt
     9301 tggagatctt aagaaacgtc ttttgtttct atttggagca ttgattgttt ttcgaattgg
     9361 tgcccatata cccgtacctg gagttgatgc tgttgcttta gctaaattat acgaaagcgc
     9421 tggaaacggc atcctgggaa tattgaatat gttttccggt gggtcgttag agcgctttag
     9481 tatatttgca ataggaatta tgccatatat ttcagcttct attattgtac agctcgcttc
     9541 tgaaattttg ccatcattga aggctttaaa aaaagaaggg gaggctggta gaaaggtaat
     9601 tacgaaatat acgaggtatg gtactgtttt gttagcaatt cttcaaagtc taggtgttgc
     9661 atctttcgta tttcagcaag gaattgttgt aacaagttca tttgagtttc atgtttccac
     9721 ggtagtttct ttggtaacgg gaaccatgtt tcttatgtgg cttggggagc aaattactga
     9781 aaggggtatc gggaacggta tttctttaat cattacggca ggtattgctt caggtattcc
     9841 ttcgggtatt gcaaagctgg ttacactgac gaaccaaggt tctatgagca tgcttacggc
     9901 gttgtttatt gtatttggtg ccttattatt aatttatttg gttgtatact ttgaaagtgc
     9961 acagcggaag attcctattc attatgcaaa acgccagttt aatggtaggg cgggtagtca
    10021 aaatacgcat atgcctttca agttgaatat ggctggtgtt attcccccaa tttttgcttc
    10081 cagtattatt ctatttccat ctactctttt aggttggttt ggttcggctg atacaaatag
    10141 tgttttgcac aaaatagctg gattgttaca acacggtcaa ttgctgtata tggctttatt
    10201 tgcagcgaca gttattttct tttgttattt ttatacggct ttggttttta gccctaaaga
    10261 aatggcagag aatttaaaaa agagtggtgc ttttgttcct gggattagac ctggtgagca
    10321 gacctctagg tatttagaaa aagttgtatt acgtttgaca ttgtttggag ctctttatat
    10381 tacaactatt tgtttaattc cagagttctt aactacggtt ttaaatgtac ctttttattt
    10441 gggtggcacg tctttgttga ttctagttgt tgtaacgatg gattttagta cacaaataaa
    10501 ttcgtatagg cttactcaac agtatgataa gttaatgact cgttcagaaa tgaaatcatt
    10561 ttctcggaaa tagaattatg gcgaaagaag atactatcca aatgcaaggt gaaattcttg
    10621 aaactttacc taatgcaaca tttaaagtaa aacttgagaa tgaccatatt gtattgggtc
    10681 atatttctgg gaagatgcgg atgcattaca ttcgtatttc tccgggagat aaggtcacag
    10741 tagagctgac accttatgat ttaactaggg ctcgaatcgt tttcagagca agataaacca
    10801 ataaaaggaa aataaaatgc gtgtacaacc atctgttaag aaaatttgcc gaaattgcaa
    10861 gattattcgt cgaaatcgtg tagttcgtgt aatttgtact gatctccgtc acaaacagcg
    10921 tcaaggttaa tggaatattt cttttaatgt gattctgtga tatagtgaca cactttgccc
    10981 taaaaaggaa aaaatatggc tcgtattgca ggggtaaata tccctaataa cgcacacatc
    11041 gtaattggtc ttcaggctat ttacggtatt ggtgctactc gtgctaaatt gatttgtgag
    11101 gctgcaaata ttgcgcctga tactaaagca aaagatttgg acgagactca attagatgct
    11161 ttgcgtgacc aagttgccaa gtatgaagta gaaggtgatt tgcgtcgtga ggtaactatg
    11221 agtatcaagc gattgatgga catgggctgc tatcgtggct tccgtcatcg tcgcggctta
    11281 ccatgccgcg gtcaacgcac tcgtacaaat gcgcgtaccc gcaaaggtcc gcgtaaagcg
    11341 attgctggta agaaataaat tttaaggaat tttattaatg gctaaagcaa acacagcttc
    11401 acgtgtacgt aaaaaagtac gtaaaaccgt gagtgagggt attgtgcacg ttcatgcatc
    11461 tttcaacaat accatcatta caatcactga ccgtcaaggc aatgcgttgt cttgggctac
    11521 ctctggcggc gctggtttta aaggttctcg taaaagtaca ccatttgcag cacaagttgc
    11581 agcagaagca gctggtaaag ttgcccaaga gtatggcgtt aaaaatttag aggttcgtat
    11641 taaaggtcca ggtccaggtc gcgaatcctc tgtacgtgct ttgaatgctc ttggtttcaa
    11701 gattaccagc attactgacg ttaccccgtt gcctcataac ggttgccgtc cgcctaaaaa
    11761 acgtcgtatt taatattgga gtgatttgaa acatggcacg ttatattggc cctaaatgta
    11821 agttggcacg tcgcgaaggt acggatttgt ttttgaagag tgcgcgccgc tctttggatt
    11881 ctaaatgtaa aattgattcc gctcctggtc agcatggtgc aaaaaaaccg cgtttgtcag
    11941 actatggttt gcagttgcgt gaaaaacaaa aaatccgccg tatttatggc gtattagaac
    12001 gtcagttccg tcgttatttc gcagaagctg atcgtcgtaa aggttctacc ggcgagttgc
    12061 tgttgcagtt gctggaatct cgtttggata atgtcgttta tcgtatgggt ttcggttcta
    12121 cccgagctga agcaagacag cttgtttttc ataaggcgat agttgtgaat ggacaagttg
    12181 tcaatattcc ttctttccaa gtgaaagctg gtgatgttgt ctcagttcgt gaaaaagcca
    12241 aaaaacaggt acgtattcaa gaagcattgg gtttggcaac tcaaatcggc ttgccgggtt
    12301 gggtttctgt agatgcggat aaacttgagg gtgtgttcaa aaacatgccg gatcgctcgg
    12361 aattgaccgg tgatattaat gaacagctgg tggtagagtt ctactctaaa taatgctagc
    12421 tcagtgaggg acagttaaat gcagaatagc acaaccgaat ttttgaaacc tcgtcaaatt
    12481 gatgtaaata ctttttctgc aactcgtgca aaagtatcta tgcagccatt tgaacgtggt
    12541 ttcggtcata ccttaggtaa tgctttgcgc cgtatcttac tgtcatccat gaatggtttt
    12601 gctcctactg aagtagctat tgccggtgta ttacacgaat attctactgt tgatggtatt
    12661 caggaagatg ttgttgacat tttgctgaat attaaaggta ttgtgtttaa actccatggt
    12721 cgtagccaag ttcaacttgt gttgaagaaa tcaggttcag gtgtcgtatc tgccggtgat
    12781 attgagttgc cgcatgatgt agaaattctg aatcctggtc atgtcatttg tcatttggct
    12841 gataacggtc aaattgagat ggaaattaaa gtagagcaag gtcgtggtta tcaatctgtt
    12901 tcaggtcgtc aggtagttcg tgatgagaac cgtcagattg gtgcaatcca gttggatgcg
    12961 agcttttcgc ccatcagccg tgttagcttt gaggttgaac ctgcacgtgt agagcagcgg
    13021 acggatcttg ataagttggt tttggatatc gaaaccgacg gttctattga tcctgaggaa
    13081 gctgtacgca gtgcggcacg tattttgatt gatcagatgt ctatttttgc tgatttgcag
    13141 ggtacgcctg tggaggaggt tgaagaaaaa gcacctccta tcgaccctgt tcttttgcgt
    13201 ccggtggatg atctggaatt gacagtacgt tcagctaatt gtttgaaagc tgaggatatt
    13261 tattatattg gcgatttgat tcaacgcact gaaaccgagc ttcttaaaac gccgaatttg
    13321 ggacgtaaat ctttgaatga gattaaggaa gtattggcat ctaaaggttt gacactgggt
    13381 tctaagttgg aagcatggcc acctgtaggc ttggaaaagc cttaatgaag aattaaagga
    13441 taattgatat gcgtcatcgt aatggcaatc gcaaattaaa ccgtaccagc agtcatcgtg
    13501 ctgcaatgct gcgtaatatg gcgaattcat tattgactca cgaagctatt gtaacaactc
    13561 tgcctaaggc caaggaattg cgccgtgtag tagagccgtt gattacattg ggtaaaaagc
    13621 cgtcattggc aaaccgccgt ttggcatttg accgtactcg cgaccgtgat gttgtagtaa
    13681 aactgtttgg cgatttgggt cctcgtttta ctgctcgtaa cggtggttat gttcgggtgt
    13741 tgaaatacgg attccgtaaa ggtgataatg cacctctggc actggttgaa ttggttgaca
    13801 aaccggctgc tgagtaattt tagtcatata acgccatctg ccgaaaagca ggtggcgtta
    13861 tttttgcaat atctgatagg taatagggta ttggctatca tgtttaaaat attaattgaa
    13921 tagctaaggt ttgcgcggta aacttacatc attaaaaaat tctatgatgg tttatataat
    13981 gaatgctttc gatataaagt cgacaaagat ggacgtattg tctatatctt tgcatacgtc
    14041 agacttgttt gatttggaag atgtgctggt caaattgggc aagaagtttc aagagtctgg
    14101 tgttgttcca tttgttctgg atgttcaaga gtttgattat cccgagtctt tggatcttgc
    14161 tgcattggtt tcgttgtttt caaggcatgg tatgcaaatt ttgggtctga agcattctaa
    14221 tgaacgttgg gctgctgcgg ctatgaagta tcatttgctg ttttgtctgt ctcattcgga
    14281 aaatgttaaa gaactgggtc aggttgaggt gcagaacacg gaggatggtc agaaagcaag
    14341 gaaaacagta ttgattacat cccctgtccg taccggtcag caggtttatg ccgaagatgg
    14401 cgatttgatt gttacggggg cggtcagcca gggggcggaa ttgattgcgg atggcaatat
    14461 acatatttat gcgccgatga gggggcgtgc tttggccggt gccaagggtg atacttctgc
    14521 ccgcatattt atccactcca tgcaggcaga actggtttct gtggcgggta tttaccgtaa
    14581 ttttgaacag gatttgccga accatctgca caagcagccg gtacagatat tgttgcagga
    14641 taaccgattg gttatcagtg caattggctc agagtaattg tttgatattt aaaaaggaaa
    14701 tattgtggca aaaattattg tagtaacttc aggtaagggc ggtgtcggta aaacgactac
    14761 cagtgccagt attgcgacag gtttggcatt acgcggatat aaaactgcgg taattgattt
    14821 tgatgtgggt ttgcgtaacc tcgacctcat tatgggttgc gagcgtcgtg tcgtttatga
    14881 cctgatcaat gtcattcagg gggaggcgac gctcaaccag gctttgatta aagataaaaa
    14941 ttgtgaaaac ctgtttattt tgccggcttc ccagactcgg gataaagacg ctttgacacg
    15001 cgagggcgta gaaaaagtga tgcaggagct gtccggcaag aaaatgggct ttgagtatat
    15061 tatttgcgac tctcctgccg gtattgagca gggtgcattg atggcgttgt attttgctga
    15121 tgaagccatt gtaacgacca atcctgaggt ttccagtgtg cgtgactccg acaggatttt
    15181 gggaattttg caaagcaaat cccataaggc agagcaaggc ggttcggtta aagaacatct
    15241 gttgattacg cgttattctc ccgaacgtgt ggcaaaaggc gaaatgctgt ctgtacagga
    15301 tatttgcgat attctgcata ttcctttgct gggtgtgatt cctgaatccc aaaacgtctt
    15361 gcaggcatcc aattccggag aaccggtcat ccatcaggac agcgtggcgg cttccgaggc
    15421 atataaggac gttattgccc gtcttttggg cgagaaccgt gaaatgcgtt tcttggaagc
    15481 tgagaaaaaa agcttcttca aacgtctgtt tggaggataa ggtatgtcat taatcgaatt
    15541 tttattcggc agaaagcaga aaacggcaac cgttgcccgc gaccgccttc aaatcatcat
    15601 tgcccaagag cgcgcccaag aaggtcaggc tccggattac ctgccgactt tacgtaaaga
    15661 gttgatggaa gtcctgtcca aatatgtgaa cgtttcatta gacaatatcc gtatttccca
    15721 ggaaaaacag gatggtatgg atgtgcttga gttgaacatt actttgccgg aacagaaaaa
    15781 ggtataggac atgaccttaa ccgaattgcg gtacatcgtc gcagtcgccc aagaacgtca
    15841 tttcggcagg gcggcgcggc gttgttttgt cagccagccc actttgtcta ttgccattaa
    15901 gaaattggaa gaagagcttg ccgtctcttt gtttgaccgg agcagcaacg atattattac
    15961 gaccgaggcg ggggaacgta tcgttgcaca ggcgcgtaag gtgttggaag aggcagagct
    16021 tatcaggcat ttggcaaatg aagaacaaaa cgagctggag ggtgcgttca aactcgggct
    16081 gatttttacg gttgcgccgt acctgctgcc gaaactgatt gtctcgttgc gccgtactgc
    16141 accgaaaatg cctttgatgt tggaagagaa ttacacgcat actttgaccg agtcgctcaa
    16201 acgcggggac gttgacgcga ttatcgttgc cgaaccgttt caagagccgg gcattgttac
    16261 cgaacccttg tatgacgaac cgtttttcgt gattgtcccg aaagggcatt catttgagga
    16321 actggatgcc gtttcgccac ggatgctggg tgaggagcag gttttgctgc tgacggaagg
    16381 caactgtatg cgggatcagg tactctcaag ctgttccgaa ttggcggcga aacaacgtat
    16441 acaggggttg accaatacat tgcagggcag ctcgattaat acaatccgcc atatggttgc
    16501 cagcggtttg gcaatcagcg tgttaccggc aaccgcgctg accgaaaacg atcatatgct
    16561 gttcagcatt attccgtttg aaggtacgcc gccaagccgg cgggtcgtat tggcgtaccg
    16621 ccgcaatttt gtccgtccga aggcgttgtc ggcgatgaag gcggcgatta tgcagtcgca
    16681 gcttcacggg gtaagtttta tccgcgacta ggcgcaggca ttgttttcaa aacgccattt
    16741 ccctgagccg acaacacggt atgccaagat attgccgtca tcatcgattt tgagtatagc
    16801 atcgccacgg aaactgccgt cctgaagata ttcgactttt gcatcactgt gaatgttttc
    16861 atcagtgccg atgcaatgcc atgtatagtg gattaacaaa aaccagtacg gcgttgcctc
    16921 gccttgccgt actattgcca aggcgtacca gcctgatttg ttgatgtgtg tactactgca
    16981 tgggttgtta agtcctgcaa gtgatttaag tgtgaagatt gagtaatgcc cactagtcgc
    17041 aggcgcgggg ggcaggtgct aagtcattgg ttatctcctt actatctatc taactacagg
    17101 gtgtattatg cgcctccttg ttgttttgtg caagtggttt tctgataatt tatgtaaaga
    17161 tttggtaaag acgtatagcc tttttctttg cattgtgctt gcgcagggta tcaggtaggt
    17221 ctcaaaaaat ttgaaaattt ttatgttttc gtataaaatc ttttgcactt atacggagtg
    17281 agttatgcgg tacaccatta aaacatttca aacccttgct gatgaaactt tcccctctaa
    17341 gaacttcaaa attctttcgt tcaatggggt ggcacgacct ataaccattg tttgccctac
    17401 acacggggtg cagactgttt ctgcggggca agcatttatc cgttccaaac acggctgtcc
    17461 tgcctgtggt ttagttttat caacctccgt tttggcctct aggggtcggt cagtctccat
    17521 cctcgacacc gccacaggcg aaacactctc gttccccagc gtacaagctg ccgccaaagc
    17581 cctaaacacc tcctacggct ctatacgaac caagctcgac ggacgttcgt cccccgacaa
    17641 ccttgtctgt aacaggtaca aagtaatgcc gtaatctcga aacttcgtgc tataataaac
    17701 tcctagcttt tgcaggagtt tgttttttat ggatttaaat gtcgaaatca agaattttgg
    17761 caaggttgcc catgctaggg tttccattcg cccgcttacc gtcatcacgg gttgcaactc
    17821 cacactcgcg ttccccagcg ttactgccgc aggcactgct ttgggtgtgc attttcagca
    17881 aattaaccac aggctcaagg gtcgaacgtc ctgtcaggag gtgttgattt ctacaccgat
    17941 tatactgtct gcggcttcgt cgccttgtcc tgatttttgt taatccacta taaaagaggc
    18001 cgtctgaaaa acatttttca gacggccttg ttgattcaat caaatcagtc tttcaacttc
    18061 gacaactgag tttgcacttt tgccattttg tcttccaatt ccgccaaatc ggctttgtct
    18121 ttttccacca aatgcgccgg ggctttttcg gtgtagccgg gtttggagag tttggcgttg
    18181 agtttgtcca aggctttttg cagcttctcg gcttctttgc tcaaacgggc ggtttcggcg
    18241 gctttgtcga tttcgacttt cagcatcagg cgcgcgccgt tgcagacggc gacgggcgcg
    18301 tcttcgcttt cgggtagggc ggcgacttgc cgtgcttcgg tcaggcgggt catcatcggc
    18361 aggtatttga ggtagtccgc caagtcgtcc gcgctttcga caaacagcgg agctttgaca
    18421 ttaggctgga tgcccatttc gccgcgcagg ttgcggactg cgccaatcaa atcctgcaac
    18481 acggtcattt gctcgaatgc cgtctgaaca atatcgccgc cgtcggcttc ggggaagcgg
    18541 gcgagcatga tgctgtcggc ggttttcgcg tcgcacatag gagcgacggt ttgccacagt
    18601 tcttcggtaa tgaacggaat aatcgggtgc agcaggcgta gggcggcttc gagtacgcgc
    18661 aataaggtat ggcgtgtggc gcgctggcgg ctggcgcagc cggtttgaag ctgcactttg
    18721 gcgagttcca aataccagtc gcaatagtcg ttccatacga agctgtacag ggtttccgcc
    18781 gccaaatcaa agcggtaggt ttcgtaggct tgcgtaacct gttcgatggt ctgattcaga
    18841 cggcctatga tccacatgtc tgggaaagag tagccgcgag gctcggtggc ggttgctccg
    18901 tagccgcagt cttggttttc ggtgttcatc aagacgaagt tggtggcgtt ccagattttg
    18961 ttgcagaagt tgcggtagcc ttcggcgcgt ttgaagtcga agttcacgct gcggccgagg
    19021 ctggcgtagc tcgccatggt aaagcgcaat gcgtccgcgc ccatgctggg gatgccttcg
    19081 gggaagagtt ttttggtggc ttcttccact ttcggtgcgg tttcgggttt gcgcagaccg
    19141 gttgtacgtt ttaccagcag tttttccaag tcgatgccgt caatcaaatc cacagggtcg
    19201 atgacgttgc cttcggattt ggacattttt ttgccttcgt ggtcgcgcac gatgccgtgg
    19261 atgtacacgt ctttaaacgg tactttgccg gtaaagtggg tggtcatcat aatcatgcgc
    19321 gccacccaga agaagatgat ttcgtagccg gttactaaga cattggacgg caggaaggct
    19381 ttgagttcgt cggtttcaga cggccagccg agtgtggaga acggcacaag cgcggaggag
    19441 aaccatgtat ccaatacgtc ttcttcgcga gtcaagcctg ttttgccggc ttgtttttcg
    19501 gcttcttcct gattgcgggc aacatacaca ttgccttcgt tgtcgtacca tgcagggatt
    19561 tgatggcccc accacagttg gcgtgagata caccagtctt ggatgttgtt catccattgg
    19621 ttgtaggtgt tgacccagtt ttcggggata aagcgcaccg cgccgctgtc gacggctttt
    19681 ttggctttgt cagcaaggct taagcctttg aattcgctgt caggctcgcc gccgtttggc
    19741 gtggcggaca tggcgacaaa ccattggctg gtcagcatcg gctcaatcac ggaaccggta
    19801 cggtcgcctt tcggcgtcat cagcgtgtgc gctttgattt cgaccaagaa accttgttcc
    19861 tgcaaatcgg caaccatttg tttgcgcgcg gcaaagcggt ccaagcctgc gtatttttca
    19921 ggcagggcaa agcttggttg cgcttcgcct ttgaagttga acacttcggc gtttgccaat
    19981 actttggctt ccaagtcgaa cacattaacc aagcgcgtat cgtggcgttt gccgacttcg
    20041 tagtcgttga agtcgtgcgc aggcgtgatt ttcacgcagc cggtgccgaa gtctttttca
    20101 acgtattcgt cggcaatcac gggaatggtg cggccggtca gcggcaggat taattctttg
    20161 ccgattaagt gggtataacg ttcgtcttcg ggattgacgg caacggcaac gtcgcccaac
    20221 agcgtttcgg gacgggtggt ggcgacgatg acggcttcgg caggattgtc cgccagcgga
    20281 tagcggatgt gccacataga gccttgttct tccacgcttt ccacttccaa atcagacact
    20341 gcggtaccca ataccggatc ccagttcacc aagcgtttgc cgcgataaat caagccctgt
    20401 tcatacaggc gtacgaacac ttcggttacg gtttcggcgc gtacatcgtc cattgtgaaa
    20461 tactcgcgcg tccagtcggc agaacagccc acacggcgca tctgctgcgt aatcgtgccg
    20521 ccggaaactt ctttccattc ccacactttt tccaagaatt tttcacgacc caagtcatga
    20581 cgggacacgt tttgcgcggc aagctgacgc tcgaccacga tttgcgtggc gatgcccgcg
    20641 tggtcggtgc cgggaatcca ggcggtgttg cagcctttca tacggtagta gcgggtcagg
    20701 ccgtccataa tggtttggtt gaaggcatga cccatgtgca gcgtgccggt tacattgggc
    20761 ggcggcagtt ggatggaaaa agacggtttg gtcaaatcca tatcaggttg gaaatagcct
    20821 tggctttccc agttttgata gtgcttggat tcgatttcgg ctggattgta tttgtctaac
    20881 atgatggaac tttgtgaaat taaggttatt tttgatgtgc ggattataac gcaaaaaggc
    20941 cgtctgaatc atttcagacg gcctttggca tacaggtttt aaaaatggaa caataccagg
    21001 ctgacggcaa tcaccgccat gcccattgtc aggccgtaaa cggtttcatg gccgtctgaa
    21061 tagcgtttgg cagccggcag cagctcgtcc aacgccaaaa acaccatcac accggctatc
    21121 acgccgaata ccgaaccaaa cacggcaggc gacaaaaacg gctgcaaaac caaatagccc
    21181 aaagccgccc ccaacggctc ggccaagccg gatagcagac acgcccacac cgttttctta
    21241 cggctgcggg tggcaaaata aaccggcgcg gcgatggaaa tgccctccgg aatattatgg
    21301 atggcaatcg ccaaggccaa aggcatcccg actgctggat tttccaatgt ggcaaaaaac
    21361 gtcgccaagc cttcggggaa attgtgcgca gtaatcgcaa acgccgccat catgccgact
    21421 cgcgcgatat ggcggcgttt gctttcttga aacgacgggt cttgcgcgtc taaagtttca
    21481 tgcgggttcg gcaccagacg gtcaatcagc gcaatgccgc ccatccctgc caaaaatgcc
    21541 atggtcgccg ccgcaaacgc gtggtcttta tcataaattt cagcgaacgc ctcgctggac
    21601 ttactgaaaa tctccgtcag ggaaacatac accatcgcac cgccggcaaa tgccaaacca
    21661 aacgacaaca cgcgcggatt gggcgttttg gaaaacatca ccaagccgct gcctaatacg
    21721 gtaaacaaac cggcagccaa tgtgatggaa aaggcaacgg ccaaattgga catcgaaaaa
    21781 tcgggcatga gaaaacctgc gctaaaagct gggacaggtt cagactaaca ctttttaatg
    21841 tatatgataa tagttattat ttattttatt gattggataa ccgaattttg aaacaaaagg
    21901 ccgtctgaaa aatgattttc agacggcctt taaatttgaa atgtcgctaa accttatcgc
    21961 tttccagctt aagcctgata gcgcgacagg ctcaaatcgt cgcttcggat ttcggtgtct
    22021 ttgccgctca cgatatcggc ggttaatttt gccgaaccca gcgacatggt ccagcccaaa
    22081 gtgccgtggc ctgtattcaa gaataagttt tcaaagcggg tgcggccgat taacggcgtg
    22141 ctgtcgggcg tcatcggtct gaggccgctc cagaacaatg cttggctcaa atcgccgcct
    22201 tccgggaaca aatcgttgac gaccaaagcc aaggtttcgc ggcgtttttc gggcagtttg
    22261 atttcgtagc ccgacaattc cgccatgccg ccgacgcgga ttctgttgtc aaagcgcgtg
    22321 atagcgactt tgtagctttc atccaaaacg gtggacaccg gcgcgccgtc tgaattggtg
    22381 accggcaggg tcaaggaata gcctttgacg ggataaatcg gcagatcgag gtctaactgc
    22441 gccaacacag tcctactgaa gcagccgagc gcacagacaa cggcatctgc ttcaaaccgc
    22501 cctgtttcgg tttcaacggc tttgatgcgc agcccgttat ggtcgatgcg gctgatggtt
    22561 tggttgaaat gaaactgtac gcccttttcc tgacacaatt tgtataggtt ttcagtgaag
    22621 aggtggcagt cgccggtcgc atctgcaggc aggtgcaggc cgccggcaat tttggcggta
    22681 acgcgtgcca gcgcaggctc aaattctgca cattcttcgg gtttcagacg gcggtacggc
    22741 acgccgtagc gttccaaaac ggcaatgtct tgttttgccg cttcgacttc tttggtttgg
    22801 cggaaaacct gcaacgtccc ttttttgcgt ccctcaaaat tcatgccggt ttgcgcttca
    22861 aaacggcgga acatttcacg gctgtattcg gacatcctga ccatgcgctc tttattgatt
    22921 tgatagcggg atgccgtgca gttttgcagc atccgccaca gccattcgat ttgatacagg
    22981 ctgccgtcgg ggcgaaacag caaaggcgga tggcttttaa acagccattt cagtgctttg
    23041 gtcggaatac cgggtgcagc ccaaggcgtg gtatagccgt aagaaagctg gcctgcattg
    23101 gcaaaactgg tttccatcgc cacaccctcg gcgcggtcga tgaccgttac ttcatgtccg
    23161 gcctctgcca gataccacgc ggaagacacg ccggcaacac ccgcacctaa aacaagcact
    23221 ttcatgtttc tccctccgac tttttcaaaa cagacttaat atgccgtgcc gtctgaatat
    23281 tcggattcag acggcctcgg atattaatgc ggcaattcgc cgtttgtgat tttttgtttg
    23341 aagtcgcgcg tttcattgac gatgactttc gccatcaata aaagtgcaat caggttgggc
    23401 aatgccatca agccgttgaa tgtgtccgaa gccagccaca ccaaatcaag gctcaacacg
    23461 gtacccagca taacggaaga aacataaccc acgcggtaca aaccggcaaa tttctcgccg
    23521 aaaacataca ccgcgcattt ttcgccgtaa tagcaccagc ccaaaatggt tgagtaggca
    23581 aagaaaatca ggccgatggt aacaatccag ccgccgatgc cgggcagcat tttttggaat
    23641 gtgacggttg tcagtgccgc gccgctcaat tcaggtttga caaactcgcc gcctgcgccg
    23701 agcagaccca tcaccaaaat aatgccggta atcgagcaaa cgacgatggt gtccaaaaac
    23761 gtaccggtca tggaaaccaa agcctgacgg acggggtggt cggttttcgc ggctgcggcg
    23821 gcaatcggtg cagaacccat acccgcctca ttggagaaca cgccgcgcgc cacgccgtag
    23881 cggatgaccg taccgatagc gccgcccgcc actgcctgcg cgctgaacgc atcggagaaa
    23941 atcagcttga cggcgggcat cagtgcatcg gaattaatcg cgataatgga aagaccgccc
    24001 aacacataaa acaccgccat agcaggcacg atgaaagaag cggctttggc gatgccttta
    24061 ataccaccta aaacgacaac ggcagtcaga acggtcaacg taatgccggt ataggcaggt
    24121 tcgataccga agctggtttg caccgcctgt gcaaccgagt tggactgcac cgagctgccg
    24181 ataccgaagg aagcgagtgt gccgaacagc gcaaatgcga cggccatcca tttccagttt
    24241 ttgcccaagc cgttttcgat gtaatacatc gggccgccgg acatttcgcc tttggagttg
    24301 gtgacgcggt atttcaccgc caacacgccc tcgccgtatt tggttgccat accgaaaatg
    24361 gcggttatcc acatccaaaa taccgcgccc gggccgccgg ttaccaccgc agtcgccacg
    24421 ccggcgatgt tgcccgtacc gatggtggcg gacagcgcgg tcatcaacgc cgcaaaatgg
    24481 gaaatatcgc cttcgtggtc ttcgccgtct tcatgcttct ttgacggcac aaacgcctgt
    24541 ttcagcgcat agcccaacat agtgaactgc aagcctttca gcataacggt cagcacaatg
    24601 ccggtgccga ccagcagcat caacataaca gatccccaga cccagccgct gacggtttcg
    24661 aaaaaggctt tgagattgtc taaaaacaat tgcatggctt tctcctttgt ctgttttatt
    24721 tttaaaacac cacttttgta gtgtcctgta atttcagcac agaatattca ataagacaat
    24781 atgttctttt gaaaaatact tttggttttt tctccgaaag caggtcggtt caagctgcgg
    24841 aaattgtttg caattcttta aaagcagcgg cggaggtcac aatgaaatgt ccgaatgggg
    24901 atgtggcggg cggcagaaat catcaatgct gccgactgcc atacttctga aatctacaaa
    24961 atgatgcatc gatcaaacaa tataccgctt taaaaaaacc gatgccgtct gaaacgcttt
    25021 cggggtttca gacggcatca aaagggtacg gtcagcggat gatgccgcgc gccgattgtg
    25081 cgaaaaagtc tcggaatacg gcaagctcgg cttgggtttc ggcgcggcgg agaatgtctg
    25141 ccttggcttc ttcaaacgga atgccgcgat ggtagagggt tttgtacacg tctttgacgg
    25201 cggaaatctg ctctgcggta aaaccgttgc ggcgcatacc ttcgctgttg agccccgccg
    25261 gttcggcgcg gtagcccgat gccataaagt agggcggcac gtctttgtgt acgcctgcgg
    25321 caaacgcggt catggcgtag tcgccgatgc ggcagaattg gaaaaccagc gtgtagccgc
    25381 ccaaaacgac gtagtcgccg acggtaacgt gtccggcaag cgaggcgttg ttggcgaaga
    25441 tggtgtggtt gccgaccacg cagtcgtgcg cgaggtggca gtacgccata atccagttgt
    25501 cgtcgccgat acgggtttcg ccgatgccgg ttaccgtgcc taaattaaag gtggtgaatt
    25561 cgcggatggt gttgccgttg ccgataatca gcttggtcgg ctcgtcgcgg tattttttgt
    25621 cctgcggaat ttcgccgagg ctggcaaatt ggaaaatgcg gttgttttcg ccgatgctgg
    25681 tgtggccgtt gatgacggcg tgcggaccga tttcggtatt cgcgccgatt tggacgttgg
    25741 ggccgataac agtgtacgcg ccgactttga cgccggagtc gagttcggct ttggggtcga
    25801 tgacggcggt cgggtggatg agggtcatgt ttttcctttc ctgtcgtgtt gccgcgaaga
    25861 tgcgcgacgg caacaggtcg tctgaaaact ttcagacgac ctttttctga acactcaaac
    25921 cacgcgtttg gcacacatga tgatggcttc gacggcgact tgcccgtcca ctttggcaac
    25981 ggcgttgaat ttgccgatgc cgcgccggct ggtcagcagc tcgacttcaa agacgagttg
    26041 gtcgccgggg atgacttggc gtttgaaacg ggcttcgtct atgccggcga agaagaagaa
    26101 ttcgttttct ttgcgcccgc cttcgctcaa aatcgccaac gtgccgcacg cctgcgccat
    26161 cgcttcgatg atgagtacgc cgggcatcac gggcaggtcg gggaaatggc cttggaactg
    26221 gggttcgttt atggtgacgt ttttgatggc ggtcagggtt ttcatcggct cgaaggcggt
    26281 gatgcggtcg agctggagaa acggatagcg gtgggggatg agtttttgga tgtctttggc
    26341 ttcgatgggg agttgaacgt ccatgtctgt cgtattcctt gaataaagtc ggtttggatt
    26401 tattgcgtgt ctttgccgtc tgaaagctgc tgttccagcg ttttgaggcg tttgttcatt
    26461 tcgcttaagc ggtggatgta aacagcgttg cgcgcccatt ctttatgggt ggacatcggg
    26521 aagatgccgg cgaggtgttt gccgctttcg gtaatgctgt gggtgacgga cgtgccgccg
    26581 ccgatggtgg ttttgtcggc gatttcgatg tgtccgaccg taccgacgcc accgccgatg
    26641 atgcagtagc tgcctatggt tacgctgcct gagatgccgg ttttggcggc gatgacggtg
    26701 tgcgaaccga ttttgcagtt gtgtccgatt tggacttggt tgtcgatttt ggtgccgttg
    26761 ccgacggtgg tgtcgctcat cgcgccgcgg tcgatgttgg tgttcgagcc gatttctacg
    26821 tcgtcgccca gcgttaccgc gccggtttgc gggattttaa accatgaatc gccggcaaaa
    26881 gcgagtccga aaccgtccgc gccgatgact gcgccgctgt ggatttcgac gcgtctgccc
    26941 agtgtacagc cgtaataaac gacggcgttg ggatgcagga cgacttcgtc gcccagtttg
    27001 caatcgtgtt ggacgacggc gtttgccaag atgcggcagc cttcgccgag cacggtgttt
    27061 gcgccgatgt aggcgttcgc gccgatttcg cagtttgcgg gaacggtcgc gctcggttcg
    27121 acgacggcgg tcggatggat gccgccgcgc gctttgacga cgggtgaaaa caggcgggcg
    27181 actttggcga aatagagata ggggtcatcg gcgacaatca ggttgcgccc ttcaaatccg
    27241 tctgccgctt tggcggaaac gatgaccgcg cccgcgctgc tgtcgtggac ttcggctttg
    27301 tatttcggat tggcaaggaa gctgatgtgt tccgcctgcg cgtctgcgag cgggcgcacg
    27361 gcggtaacgg aaatgtcctc gccgcgccat tcgccgccga gccgcgcggt gatttgggac
    27421 agggtgtagg tggccggaat catggttttc ctgttcggta tgccgtctga aagggtcagc
    27481 gggcgttcat ttctttaatg acgctgtcgg taacgtcgta ttgggtgttg acgtaaatca
    27541 cgttctgcaa aatgacatcg taaccttcct gtttggcgat tttgacgatg acgcggttgg
    27601 cgttttgctg gagggaggca aactcttcgt tgcggcggag gttgtagtct tcttcaaact
    27661 gagcctgttt tttgcggaac gctgcgacca gcccgcgcca tttttcttcg gcttgcgcct
    27721 tttttgcgtt tctgagtttg ccttcggcaa gctgcctttc caaatccaga ccttcgcgtt
    27781 gcagtttttg caattcgtcc tgacgggcgg aaaattcgct gtccagcgtt ttttgaatct
    27841 tgcgcgcctg cttggattcg aggtagatgc gctcggtgtt gataaagccg attttttgga
    27901 aggtgtcggc gtgcgcgcct gcggtgcagc acaaaccgat cagagccgcg gcaaacgcgc
    27961 gggtcaaacg ggtcatggta aaactccttc ggatgttgcc gcgaaatgcc gtctgaaggg
    28021 cttcagacgg catttgcggg attagaacgt cgtgccgagt tggaattgga agcgttggat
    28081 ttcgtcttcc ggttttttct tcagcgggta ggcgtagctg aatttcatcg ggcctaaagg
    28141 cgagagccag gtaaccgcgc cgccggcgga atagcgcaat tcgttggtaa aggtggattt
    28201 atgggtattg ccggcgccgt aaatgttttg aaccctgccg ccggtcgcgg aactgctgtt
    28261 gtcgtcgtag gttttgccgt cccacacgct gcctgcatcg gcaaacaggc tcaggcggac
    28321 ggtgcgtgcg tctttcgcac ccggcatcgg gaagagcagt tcggcggaaa cgttggcttt
    28381 tttgttgccg ccgtagctga tcttgtcgcc gtattcgtca tagactttcg gaccgagcgt
    28441 gccgctttcg taacctcgta ccgaacccag gccgccgccg tagaagtttt caaagaaggg
    28501 gatttctttg gttctgccgt agccgcctgc aatgccgact tcgccgccga gcatcagcgt
    28561 gaaggttttg cttaagggga agaaccaggt ttggttgtgg gtggcggagt agtattgcag
    28621 tttgctgccg ggcagggcga tttcggcgtt cacgcccgtc aggtagccgc gcgtcggcca
    28681 taacgcgctg tcggttttgt tgcgccccca gccgacggta cctttgtaca gccagccttt
    28741 gaagctgccg tctgtgccgt cggttttgcc gtatttcttg ataaagtcgg catagtgttt
    28801 gggcgctttg ttgtaggtgt tgacggtcag gtgttctgcc accaaaccga aattcacgcg
    28861 gtcgtattcg gtaacaggca cgctcatgcg gatgcctgcg cctgccgtgg tggttttata
    28921 ttgtttgatg ctggtcgatg ctttgcgcgg gtcgaaggct tttccgtaaa catcgtagcc
    28981 caggctgacc ccgtctgccg tgaagtacgg gtcggtaaac gacagcgagc cgttgagcgt
    29041 ggttttgctt cgtgaggcgc gcagggcggc cgacttgccc gtaccgaaca ggttgtcttg
    29101 ggaaacgcct gcggacatga ccaggccggt atcctgtacc cagcccgcgc tcaagtcgag
    29161 cgagccggtg gaacgttcgg tcaggctcat gttcaaatcg actttgtcgg gtgtgccggc
    29221 aagcgggacg gcatcaaact gtacgttgtc gaagtagccc aaaagctcga cgcgctcttt
    29281 ggagcgttgc agcttggagg tgtcgtaagg cgcggattcc atttggcgca attcgcggcg
    29341 cacgacttcg tcgcgggttt tgttgttgcc ggtgatgtgg atttcgttga cgtagatttt
    29401 ccggcccggt tcgatgtgca ggacgaaatc gacggttttg gtttcggcgt ttggcagcgg
    29461 ctgtacgctg atttcgctgt atgcgtagcc tgccgagccc atgcggttct gaatctcacc
    29521 caaaacggcg gtcatctgct ggcgttcgta ccatttgccg ggcttcatgg tcagcagttt
    29581 ttccagttcg gctttgggga cttcgttggt gtcgccttcg atggagactt tgccccaacg
    29641 gaaacgtccg ccttcgtgga cggtgatttt gatggtctgc ttggttttgt cttcgttggt
    29701 ttggatgtcg gtatcgagga tgcggaaatc gaagtagccg ttgttctggt agaagtcggt
    29761 tactttttcc atgtcttggg caaatttctg ctcgttgaat tggttgcttc gtgtcagcca
    29821 tgtccaaatg ccgccttcgg tcagcgacat ctgccgcatc agtttgcggt cggaatagac
    29881 ttggttgcct tcaaattcga tgtcggtgat tttggcggat ttgccctcgt caatcgtgat
    29941 gtcgatgtcg acgcggttgc gggcgagttt ggttactttg ggcgtgattt ggatattgag
    30001 tttgccgcgc ccgaggtatt cttctttcag gccggcgact gcctgattga gtgtcgcctg
    30061 attaaagtat tgcgactgcg ccagcccgaa cgattcgagg tttttcttaa tggcgtcgtt
    30121 ttgcagcatt tttgcgccgg tgatgttgag cgagccgatg gtggggcgtt cgatgacggt
    30181 cagcaggagc tgcccgtccg cagtctcgac gcgtacgtcg tcaaagaaac cggtggcgta
    30241 caggcttttg atgatggcac tgccgtgtgt gtcgttgtag gtgtcgccga ctttgacggg
    30301 caggtagttg aatacggtac tcggctcggt acgctgcaag ccttcgacgc ggatgtcttg
    30361 gatggtgaag tcggcaagtg ccaaaggcga tatgcccaag accatcagtg cggaagcaat
    30421 ctgtttcagt ttcattgtca gttccttgtg gtgcggaatg cggtttcaga cggcattccg
    30481 aaacgtaaaa tctaaccgag cagccgggta acgtcgttga agaaggcgac cgccatcatc
    30541 agcatcatga gggcaagccc gaagcgcaaa ccgatgtttt ggacgcgttc gcccaaaggt
    30601 ttgccgcgta tccattcggc agtataaaac acgaggtggc cgccgtccaa aacggggacg
    30661 ggcagcaggt tcagcacgcc gaggctgatg ctgaccagtg ccaaaaattc caaataactt
    30721 tgcaagccga gttcggcgga ctgtccggca atgtcggcaa tggtcagcgg gccggaaata
    30781 tggctgacgg aggcgttgcc gctgattagt ttgccgaaaa atttgagggt tgtccacgag
    30841 tgggaaacgg ttttttccca gcccatgccg aatgcgcgga taacagacgg acggtagctg
    30901 cggcggattt gcgcgtccca cgccctgtcc ggctgcggac ggaggccgac gcgcccgatc
    30961 agggtgtggt cggactgttc gacagtatcg gggcggatgt cggcggtatg ggtttgtccg
    31021 gcgcgttcgt aggtcagggt gatttttttg ccggggcttt ggcgggtcag gtttgcccat
    31081 tcctgccatg aggcgatggg tttgccgtcg gcggcagtca gcctgtcgcc cggtttcagg
    31141 cctgcttttt cggcggggct gcctttttcc acgccgccgg caacggttgt gattttaaag
    31201 ggcatcagtc cgatgtagcc ttggtttttt gcgattttac cggcttccgg cgtgcctgcg
    31261 gcatcgatgg tgcggacggt ttgcgcgccc gatgccgtct gaacgccgac ggcgactttg
    31321 ccggcttcga ggttgaggac gatttcggtt tgcgcgccgc cccaatctgc aacgggtgtg
    31381 ccgttgacgg attgtatttt gtcgccgctt tggaagccgg cgcgggcggc aatggtgtcg
    31441 ggttcgactg tgccgacgta ggggcgcagt tcggttacgc cgaaggaaaa gctcagtccg
    31501 tacagcaaaa ccgccagtgc gagattggtc agcgggccgg cggcgacgat ggcgatgcgt
    31561 ttggcggggt gttgtttgtc aaaagcgtag ggtaaatcgg cttctgatac ttcgccttcg
    31621 cgcgtatcga ccattttgac gtaaccgccc aacggaatcg gggcgaggca ccattcggtg
    31681 tcgccgcgct ttcgggtgaa aaacggtttg ccgaagccga cggaaaagcg tacgactttg
    31741 acgccgcaca atctggcaac gatgtagtgt ccgaactcgt gcaggctgac caaaatcagg
    31801 atggcgaaga taaaagctag aagggtgtgc aaatggtttt cctttgataa cggtgttcag
    31861 acggcatcag cgcagtgtgc cgataaatgc ccgcgcttgt gcgcgtgtcc gggcatcttg
    31921 cgccaagagc ccccctatgt cgcctatgcc gtctgaaaag tcttgtgaaa gacaatgggc
    31981 gacggttttg gcaatgtcgg taaacttaat ctgtccgtcc aaaaaggcgg cgacggcggc
    32041 ttcgttggcg gcgttcaata cgcagggcgc gaccccgccc gcgttcatgg cttcataggc
    32101 gagcttcagg caggggaagc ggtcaaagtc gggcttttgg aaggtcagcg cggacaatgc
    32161 gtcgaaatcc aggtcgccga cacccgaatc gatgcgctcg ggcaaaccca aacaataagc
    32221 gatgggcgtt cgcatatcgg gattgcccag ttgcgccaac acggagccgt cgcggtagcg
    32281 caccatgctg tgtatcacgg attgcggatg gatgacgact tcgagtttgt cgggcggaca
    32341 gttgaacagc caatgcgctt caatcagctc caaacctttg ttcatcatgg tggcggaatc
    32401 gacggagatt ttgcgtccca tacgccaatt ggggtgtttg accgcttggt cgggcgtaat
    32461 gctgtcgaac gtgtttaaat cggtcgttaa aaatgggccg ccggaagcgg tcaggataat
    32521 cgaacggatg ccgtgttcgt tcagacgacc tgtgtaatcg cgcggcaaaa cttggaaaac
    32581 ggcgttgtgt tcgctgtcga cgggtaacac tgccgcgctg tttgcacggg cggtttccat
    32641 aaacaacgcg ccggaaacca ccaacgtctc tttgttcgcc agataaatag ttttgccttt
    32701 ttgcgccgct gcgagcgcgg aaggcagccc cgccgccccg acgatggcgc acatgacacc
    32761 gccgacttcg tcggcagacg caacgtcaac caatgcctgc gcgccgtgta aaacctgtgt
    32821 cgccgtgccg tcgtgtttca acagggcttc aagccgggcg gcgtgttccg tatcggcaac
    32881 gacggcatat tcggggcgga acgtttgaca ttgagccgcc agtttctcga cctgcttatg
    32941 ccctgccagc gcgaatacgc ggaatttttc ggggtggcgg gagacaacgt ccagcgtgct
    33001 ttcgcctatg ctgccggtac tgcctaatat ggtcaggact tgtggtgtca taatggggat
    33061 aactttatac cggatgccgt ctgaagcgtt ttcagacggc atagaatcaa tttaaaaccg
    33121 acatcatcgc cgcatagacg ctgataacgg caatcaggct gtcggtacgg tcgaacacgc
    33181 cgccgtgtcc gggcagcagg ttgctgctgt ctttgatgcc tgccgcgcgc ttgagccagc
    33241 tttccaaaag gtcgccgcat acgctgacga cggtcagcac caaaccgatt aacacggtat
    33301 cgaaccagcc tgtatcgaat gccagccagc cggcacttcg tacggcggtc atgtacacgg
    33361 ccacgcaaac cgcgccgccg attgcgcctt cccagctttt gccggggctg attgccggtg
    33421 cgattttgtg tttgccgaac gccttgccgc tgaaatacgc gaaaacatcg gcaacccaca
    33481 ccaaacccat cacggcgagc agcggcaggg catcatcagg gtgcgggcgc agggatacga
    33541 gcgcgaacca aaacggcatg accagaagcc aaccgacggc ataaacctgc caaccgccgt
    33601 tgagcctcca tttgaatctc aaccacaaag gcatgatggc gagccaaaat gccaaaacaa
    33661 cataccaaac caaattaggc agcatccagc cgcccgcata ggcaaccacg ccgaaaacca
    33721 aggttgcggc gaggtaatgg ttggttttaa ttttgcacaa accgctcata cgggcatatt
    33781 cccacaaggc aatcagggca atcagtccgc aaaatgcagc ccacaaccat tgcggcgcgt
    33841 aaaacagcat gcccagcatc agcggcagca gccacatagc agttatcacc cgttgtttca
    33901 gcatattcag ttcctttgct gttcgatagg cagttgctcg gaggtgcgtc cgaaccgccg
    33961 ttcgcgtttt tggaacgaag cgacggcatc gtccaaagcc ttgccgtcaa aatcgggcca
    34021 caaaatatcg gtgaaataca gttctgcata tgccatctgc cagagcagga aattgctgat
    34081 gcgcgtttcg ccgccggtgc ggatgaacaa atccggttcc ggtgcatcgc ccagcatcaa
    34141 gtgtttcgcc agcgtgtctt ccgtaatctc ggatacgcct tcggcaatca gtttgtttgc
    34201 cgcctgcaaa atatcccagc ggccgccgta atcggcggca atgctcaggg tcaggccggt
    34261 attgtttgcc gtcaacgttt ccgcctcttc gatgccttgc agaatctgcc ggttgaagcg
    34321 ttcgcggctg cccaatatct tcaggcgcat attgttttcg tgcaggcgac gtacctgttt
    34381 ttgcaaagcc tgtaaaaaca gccccatcag gaacgaaact tcgtcttcgg ggcggcgcca
    34441 gttttcggtt gaaaaggcaa acacggtcag atattgcaca cccagtttgg cgcaatgctt
    34501 caccatattt tccaatgcgt ccaaaccgcg tttgtgtccc attatgcgcg ggaggaaacg
    34561 ttttttcgcc caacggccgt tgccgtccat aatcacggcg atatgcttgg gaatggcggt
    34621 gtgttccaaa acggcctgcg tgctgctttt catgtctgcc tttcgcggtt cggcattcaa
    34681 atgccgtctg aacgccgaac cgtgcaggtt aaattgccat caaatcttct tctttggcag
    34741 tcaggagttt gtcggcttcg gtaatgtatt tgtcggtcag tttttgaacc gcttcttcgc
    34801 cgcgacgtgc ctcgtcttcg gaaatttctt tgtctttgag gagttttttg atgtggtcgt
    34861 tggcatcgcg gcgcacgttg cggatggaga cgcggccttc ttccgcttcg ccgcgtacga
    34921 ctttaatcag gtctttgcgg cgttcttcgg tcagcatggg catcggcacg cggatcaggt
    34981 cgccgacagc tgccgggttc agccccaagt ttgaatcgcg gatggctttc tcgactttga
    35041 ccgccatatt gccctcaaac ggtttcacgc cgatggtgcg cgcgtccaga agcgttacgt
    35101 tggcaacttg gctgacgggg accatgctgc cccagtattc gacttccact tggtcgagca
    35161 ggccggtatg cgcgcggccg gtacgcactt tcgccagatt ttctttcagt acttcgaccg
    35221 aacgctgcat tttgccttcg gctgtttttt gaatatcgtt gatcatattg ttctttcggt
    35281 gggataaggt gggcgggaga ccgtctgaac gcgtttcaag ccgttcagac ggcataaaga
    35341 ccgttaaccg cgaatagtac cgttattcgg gcataacgac aaggtaggcg gattggggat
    35401 gccgtctgaa gcgacaggcg tttcagacgg catcgtgtcc gaccgtcagc cgtgttcccg
    35461 tgtttcaagc aggctttggc gcaggtgttg gcgttcgtgg gcatccagcc atttgcggcg
    35521 ggtgcgttgc agcaggatga cgagggcgga aatttcctga cgcatattgg tgctgagcca
    35581 gaggaagccc tgccattggt agtggaggtg ttcggcgagg gcttccagtt cggggttgat
    35641 agcggtgtcg atgcggatgc ggcgggcgtg tctgccgttg ataagggcga cggtttgttg
    35701 caggtcggtt tggagcagtg tgaagtggcg gtcgagcagc cggatttcgc tgccgttgag
    35761 tttgggagat tgcagcttgg cggcagtggt caggagcagc tcggtggtgt tgacaatttt
    35821 acggtgggcg tgctgcatgg cttccatcat ggcggggctg atgcggcttt cgcccgatgt
    35881 ggcggcgagg tggctgcggc ttttgaccat gcgtgcgttg atttggcgca ttttcgccat
    35941 gttctcttcg aggcgttcgc gggtcatgcg cctgccgttg ctgatttcgg caatcatttt
    36001 gctgcagtcg gtcaggttgt cggcaagcat gaaacgccac atcagtgtgg atttcagcgg
    36061 cagcagtttg gcggcggcga tggcgatggc cgcgccgatg aggacgttca tcgcgcgcat
    36121 gagtccgctg tcgagccatt cgctgccgtt gtcgccgatg agcatgcaca tcgtcagccc
    36181 cgccagcatg gggacgtaac cgtttttgcc gaccgccgcc caaccggcca gtgcgcttgc
    36241 cgtgccgacg gtgaggtaga agaggagatt gtcgtggaaa taatgctggt tcagccataa
    36301 aacgcccaaa cccgcgccca gcccgatgac cgtaccgagc atacgttcca ccgccttgga
    36361 gtaaatcgcc ccttgaaact ggagcatgcc gaggacgacg aagacggtca tgcctatcca
    36421 ttcgccgtgt tggaggtgga acagccgggc gagtgcggtg gcgaacagga cggctccgcc
    36481 aagccggacg gagtggatga ggcggcggta gcggtagcgt tcgtaggagt tgagccagcg
    36541 gctggaaagg cggttgcgtt gcgaggtgtt catatcggtt gccgtctgaa gcggaaatgt
    36601 gaaaaagcac aggcttcctg ggatagggag ggtctgtgct tggtattggt gccggagaag
    36661 ggaatcgaac ccccgacctt cgcgttacga atgcgctgct ctaccgactg agctacacca
    36721 gcttttttcg ttatgatata tatgaacggt tgtttctgca acttttcggg ctgctggcaa
    36781 agttttgcac ggtataatgc ggtttgcttc gtgaggagag tcggtgatgt atgtgaacga
    36841 gaaatatccc tatgcggctt tgtttgcggg gctggtgttt ttgacgctgc cgttcgcact
    36901 gtcggtgcat gatgccttgg catttgcgtt cggacggacg gggctgctgg tgtcggtgtc
    36961 ggacggcgga ttcggctggc gtggcggttg ggacagcact gtttggtttg tgttcggtgt
    37021 gtttgcgttt ttgaatgtgg ttgtgtcggc gggtctgacg aaactggcgt acaaaaagat
    37081 gatgcggcgg cattcgcgtt acgcgctgtt tctgtcaggc gtggcggctt gcgcggcggc
    37141 ggcggtggct tggattttcg aactgttgtt gggcagtgcc gccttgggcg ggctgcgcgg
    37201 ggaggcggtg ttggaatatg cgtttgccgt gtggctggtg gcgatgctga cgctgcccaa
    37261 acgcttgacg cgcgcgccag tgcagctggt ggtgttccac aggaaaaaat aggacggaac
    37321 gggaaatgcc gtctgaaacc cgacacgcgg tttcagacgg catgtttttc cgctaacatt
    37381 acgcctgaat atggatagga agcagatatg gaacgtaaag aacgcctaca atcgggcatt
    37441 gctgcgatgg ggctggatat ttcggaaacg gcgcaggaca ggcttttggc ctatgtggat
    37501 ttgttgaaaa agtggaacaa aacctacaat ctgaccgccc tgcgcgacga ggaaaaaatg
    37561 attgtccatc atcttttgga cagcctgacg ctgctgccct atatcgaagg cgcacagacg
    37621 atgctggatg tcggttcggg cggaggacag cccggcattc cggcggcggt gtgccgtccg
    37681 gatgtgcaga taaccctttt ggatgcgaat acgaagaaaa cggctttttt acagcaggcg
    37741 gttatcgagt tgggattgga caatgtgcgc gtggtatccg gacgcgtgga ggcggtttcg
    37801 gacgtgcgtg ccgacgtgat taccagccgt gcgtttgcag aactggcgga ttttgtgtcg
    37861 tggacggcgc atctgttgaa agacggcggc tactgggcgg cgatgaaggg cgtgtatccg
    37921 cagggggaaa tcgaccacct gccgcaggat gtgtgcgtcg aaaaagtcca aaggcttgac
    37981 gtgccgggct tggatgcgga acgccatatc gtcatactcc gcaagcgttg agcgcacttc
    38041 agacggcatg aatacctttt ttgtgcggat aaaggtaaaa ttccgcactg tttttctttt
    38101 ttcaacatca gacgggacac gggcgggaca tgagtgcgaa catccttgcc atcgccaatc
    38161 agaagggcgg tgtgggcaaa acgacgacga cggtaaattt ggcggcttcg ctggcatcgc
    38221 gcggcaaacg cgtgctggtg gttgatttgg atccgcaggg caatgcgacg acgggcagcg
    38281 gtatcgacaa ggcgggtttg cagtccggcg tttatcaggt cttattgggc gatgcggacg
    38341 tgaaatcggc gacggtacgc agcaaagagg gcggatacgc tgtgttgggt gcgaaccgcg
    38401 cgctggccgg tgcggaaatc gagctggtgc aggaaatcgc ccgggaagtg cgtttgaaaa
    38461 acgcactcaa ggcagtggcg gaagattacg actttatcct gatcgactgt ccgccttcgc
    38521 tgacgctgtt gacgcttaac ggcttggtgg cggcgggcgg cgtgattgtg ccgatgttgt
    38581 gcgaatatta cgcgctggaa gggatttccg atttgattgc aaccgtgcgc aaaatccgtc
    38641 aggcggtcaa tcccgatttg gacatcacgg gcatcgtgcg cacgatgtac gacagccgca
    38701 gcaggctggt tgccgaagtc agcgaacagt tgcgcagcca tttcggggat ttgctttttg
    38761 aaaccgccat cccgcgcaat atccgtcttg cggaagcccc gagccacggt atgccggtta
    38821 tggcttacga cgcgcaggca aagggtacca aggcgtatct tgccttggcg gacgagctga
    38881 tggcgagggt gtcggggaaa taggtcaatc caaatcgggc tgcccgtgcc tttatgctgt
    38941 ttggccgagt gcgttaatat ggcggattaa aataaaaata cttatatcg
//
LOCUS       DAWKJW010000004        38515 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.004, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000004 DAWKJW010000000
VERSION     DAWKJW010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 38515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38515
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.004"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(144..234)
                     /locus_tag="WJJ54_000155"
     tRNA            complement(144..234)
                     /locus_tag="WJJ54_000155"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(198..200),aa:Ser,seq:gga)
     gene            complement(273..359)
                     /locus_tag="WJJ54_000156"
     tRNA            complement(273..359)
                     /locus_tag="WJJ54_000156"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(323..325),aa:Leu,seq:cag)
     gene            complement(395..481)
                     /locus_tag="WJJ54_000157"
     tRNA            complement(395..481)
                     /locus_tag="WJJ54_000157"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(445..447),aa:Leu,seq:cag)
     gene            570..2945
                     /gene="rnr"
                     /locus_tag="WJJ54_000158"
     CDS             570..2945
                     /gene="rnr"
                     /locus_tag="WJJ54_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEZ7341081.1"
                     /translation="MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVP
                     SKIESLARELSITEDEYVFFERRLKAMARDGQVLINRRGAVCAADKSDLVKCRIEAHK
                     DGFGFAVPLTPAKDGDFVLYERQMRGIMHGDIVTVRPAGMDRRGRREGTVLDIVERAQ
                     SKVVGRFYMDRGVAILEPEDKRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRP
                     AVAKIIEVLGDYADSGMEIEIAVRKHHLPHQFSEACAKAAKKIPDHVRKSDLKGRVDL
                     RDLPLVTIDGETARDFDDAVFAEKIGRNYRLVVAIADVSHYVRPDDAIDTDAQERSTS
                     VYFPRRVIPMLPENLSNGICSLNPHVERLCVVCDMVITYAGNIKEYRFYPAVMRSHAR
                     LTYNQVWKWLSGGIEHPFKTQIDTLYKLFKILQKKRFERGAVEFDSIETQMLFDDNGK
                     IEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEKLAALREQL
                     GLLGLQLGGGDNPSPKDYAALAGQFKGRPDAELLQVMMLRSMQQAVYEPHCDGHFGLA
                     YEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTPKKSWQALGVHTSFCERRADDASRD
                     VENWLKTYYMRDKVGEVFEGKISGMTSFGIFVTLDGIHIDGLVHISDLGEDYFNFRPE
                     IMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLIAEGSGRGRKAKSSASVKPAG
                     TAGKGKPKTAAEKKTARGGKVRGRGASAAAESGKKAKKPVPIKVKKRKGKS"
     gene            complement(3284..4747)
                     /gene="guaB"
                     /locus_tag="WJJ54_000159"
     CDS             complement(3284..4747)
                     /gene="guaB"
                     /locus_tag="WJJ54_000159"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003767939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEZ7341082.1"
                     /translation="MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLL
                     SAAMDTVTEARLAISMAQEGGIGIIHKNMPPEMQARAVSKVKRHESGVVKDPVTVAPT
                     TLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRERLV
                     TVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILKTTEFPNANKDSEGRL
                     RVGAAVGTGGDTEERVKALVEAGVDVIVVDTAHGHSQGVIDRVKWVKETYPHIQVIGG
                     NIATAKAALDLVAAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVP
                     LIADGGIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEIELYQGRSYKSYRGMGSLG
                     AMSQGSADRYFQDKTDSTDKYVPEGIEGRVPYKGPIVNIIHQLTGGLRSSMGYLGCAN
                     IAEMHEKAEFVEITSAGMSESHVHDVQITKEAPNYHR"
     gene            complement(4948..5028)
                     /locus_tag="WJJ54_000160"
                     /pseudo
     CDS             complement(4948..5028)
                     /locus_tag="WJJ54_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798803.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(5074..5535)
                     /locus_tag="WJJ54_000161"
     CDS             complement(5074..5535)
                     /locus_tag="WJJ54_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341083.1"
                     /translation="MNIIMDSTRKFGILWEENSECNGFIYGKIQIIIGENIYPKICPY
                     GYFTLNAVFNSLKSSFEEKYYAGGNNGLDFGEQLFDIDKYNSLELCNIFSIDTTYMSG
                     GGNCEIDCLVLEMGYSGEEERLFYSFDNGKNFKEIRYKKGTVESVIFQLNL"
     gene            complement(5626..8184)
                     /gene="glnD"
                     /locus_tag="WJJ54_000162"
     CDS             complement(5626..8184)
                     /gene="glnD"
                     /locus_tag="WJJ54_000162"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEZ7341084.1"
                     /translation="MPANLSSALETFKQQRDAAEAHYLKANRVSVFFREYTAAVETLL
                     AALWAEYFQNSALCLMAVGGFGRGELYPCSDVDLAVVSPAPLSDGIQEQIARFVQTLW
                     DCKLMPSVKSGGIGELCESVRDDITGDTAFLEARFLFGNRQTADELAKKMNAQRNVAA
                     FVEAKLVEMEHRHAKSQGSGAVLEPNIKSCPGGLRDIHTLLWIAKAQGLATDLPDLLK
                     QRILTRAEAGMLSHGYRRLAHIRIHLHLNAKRAEDRLLFDLQPQVAESMGYEGLNLRR
                     QSEELMRVFYRAIKTVKQLGGILTPMLQSRVSSTPLRVTLRIDDDYIQVNNQIAARHT
                     DIFFRRPEHIFKIVEIMQQRNDITALEPQTLRAWWGATRKINRSFYQNSENRHRFAGF
                     FRNGNGLTQTLRFLNLYGVLGRYLPAWEKIVGLLQHDLFHIYPVDDHILTVVRNVRRL
                     ALDMHSHELPYASALMQSFEKQDILYLAAFFHDIAKGRGGDHAIQGIADARQFAADHF
                     LTEEESDLLAWLVENHLLMSTVAQKEDIQDPSVLDAFCKRVQTHERLSALYLLTISDI
                     RGTNPKLWNAWRASLLESLFHAAGRYLTGNGGNPHTLFGRRRQEAADLLTRAAVPEKQ
                     QKKLWNALGSAYFARHQSREILWHAANLVHDFETPIVRSRILPKSNSFQVMVFMPNGP
                     RLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQIPSQHAPEDYPDIQSALEAEL
                     NSFIHGHTVAEISSHSRRISRRSRYMPIAPSITITPEEDYPDWYSVEITAVNRPFLLA
                     DMAEVFFAHNVSLRYAKISTLDERAEDSFTVFSLDLKNPKIQSSLKQTLLEQLS"
     gene            complement(8233..8553)
                     /locus_tag="WJJ54_000163"
     CDS             complement(8233..8553)
                     /locus_tag="WJJ54_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7341085.1"
                     /translation="MMGNKLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQC
                     GLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLNLMTNSADTRQMPS
                     ESGI"
     gene            complement(8878..9351)
                     /gene="bfr"
                     /locus_tag="WJJ54_000164"
     CDS             complement(8878..9351)
                     /gene="bfr"
                     /locus_tag="WJJ54_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEZ7341086.1"
                     /translation="MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHF
                     FKQSIVEMKAADDLIERILFLEGLPNLQELGKLLIGESTEEIIACDLEKEKEKHEALI
                     AAISVAEAQQDYVSRDLLEKQKDTNEEHIDWLETQQELIGKIGLPNYLQTAAQED"
     gene            complement(9379..9843)
                     /gene="bfr"
                     /locus_tag="WJJ54_000165"
     CDS             complement(9379..9843)
                     /gene="bfr"
                     /locus_tag="WJJ54_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEZ7341087.1"
                     /translation="MQGNQAVVDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERL
                     NHEMEEETTHAEDFIRRILMLGGTPKMARAELNIGTDVVSCLKADLQTEYEVRDALKK
                     GIKLCEEAQDYVTRDLMVAQLKDTEEDHAHWLEQQLRLIELIGEGNYYQSQL"
     gene            complement(10306..11289)
                     /gene="lipA"
                     /locus_tag="WJJ54_000166"
     CDS             complement(10306..11289)
                     /gene="lipA"
                     /locus_tag="WJJ54_000166"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEZ7341088.1"
                     /translation="MSEIKTDDPKRGIKLRGADKTARIPIKVVPLQEKLKKPEWIRAK
                     LPSRKFFEIKDILREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVG
                     HGRPNMLDPDEPRNLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPN
                     TKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARPGANYQHSLDLLKR
                     YKEMMPHIPTKSGIMVGLGETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRY
                     VTPEQFKIFEKEAYELGFSNAAIGAMVRSSYHADEQAAEALRESHGGCGHH"
     gene            complement(11282..11905)
                     /gene="lipB"
                     /locus_tag="WJJ54_000167"
     CDS             complement(11282..11905)
                     /gene="lipB"
                     /locus_tag="WJJ54_000167"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEZ7341089.1"
                     /translation="MKIIHKGLVEYLPTFEAMKTFNAGRNADTEDELWVVEHPPVFTQ
                     GLAGKPEHLLIRDDIPVVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALEN
                     SIIATLAEYGIEAAADPKRPGVYVGERKIASLGLRIKNGSVYHGLALNVNMDLSPFTH
                     INPCGYAGMEMTQIADFVQPCPTPDEVAAKLTAHLETQFTPKADNNE"
     gene            complement(11907..12182)
                     /locus_tag="WJJ54_000168"
     CDS             complement(11907..12182)
                     /locus_tag="WJJ54_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HEZ7341090.1"
                     /translation="MTEQKNKTSLIEFPCTFPLKVMGAVHPEFEQAVLDTVRLHAPDT
                     QAHHITTRPSSKGNYTGATVQVKVENQEQLDNIYRALTSHELVKVVL"
     gene            12367..13437
                     /locus_tag="WJJ54_000169"
     CDS             12367..13437
                     /locus_tag="WJJ54_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEZ7341091.1"
                     /translation="MYRRKGRGIKPWMGAGAAFAALVWLVFALGDTLTPFAVAAVLAY
                     VLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIG
                     FMQNTLLPWLKNTIGGYVEIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSI
                     GNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVM
                     LIMGLVYGLGLVLVGLDSGFAIGMLAGILVFVPYLGAFTGLLLATVAALLQFGSWNGI
                     LSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAA
                     VTLVLLREGVQKYFAGSFYRGR"
     gene            complement(13544..14491)
                     /locus_tag="WJJ54_000170"
     CDS             complement(13544..14491)
                     /locus_tag="WJJ54_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraslipin"
                     /protein_id="HEZ7341092.1"
                     /translation="MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGL
                     NILIPFIDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSN
                     YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKD
                     LVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAV
                     NASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVA
                     AFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK"
     gene            complement(14506..14913)
                     /locus_tag="WJJ54_000171"
     CDS             complement(14506..14913)
                     /locus_tag="WJJ54_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEZ7341093.1"
                     /translation="MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTP
                     AAVLTAALLSALGIWFVHAKTAVRKVETDSYQDLDAGQYVEILRHTGGNRYEVFYRGT
                     HWQAQNTGQEELEPGTRALIVRKEGNLLIIAKP"
     gene            14994..15653
                     /gene="ung"
                     /locus_tag="WJJ54_000172"
     CDS             14994..15653
                     /gene="ung"
                     /locus_tag="WJJ54_000172"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEZ7341094.1"
                     /translation="MDTWHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPAADVFNA
                     FRLTAFDRVKAVILGQDPYHGAGQAHGLAFSVRQGVRIPPSLLNIYKELETDIEGFSI
                     PAHGCLTAWAEQGVLLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLATHRKHLVFML
                     WGGYAQQKGRLIDSQNHLILTAPHPSPLSAYRGFFGCRHFSQANSYLSRHGIDPINWK
                     L"
     gene            15756..16673
                     /locus_tag="WJJ54_000173"
     CDS             15756..16673
                     /locus_tag="WJJ54_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ7341095.1"
                     /translation="MHHFGRAATSCAAVWMRAFIKNYVLTLLFLKYVSDKHKYGGGMI
                     ELHADTTFDDIVKLKNTADIGDRLNKIIAQIAEANDLKGVIDVADFNDEDKLGKGKEM
                     IDRLSRLVGIFEKLNLSSNQAEDDDLLGDAYEYLMRHFATESGKSKGQFYTPAEVSRI
                     MAKIIGISADCPSSTSVYDPTCGSGSLLLKAAAQAGSQISLYGQEKDVATASLARMNM
                     ILHNNETAEINTGNTLSDSSFRDENDGLKTFDFAVANSPYPARKKRRLRLFAASAQKP
                     ETKRQRCDYSSARCAVSRQCRSAYSHGIA"
     gene            16582..16917
                     /locus_tag="WJJ54_000174"
     CDS             16582..16917
                     /locus_tag="WJJ54_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEZ7341096.1"
                     /translation="MKPSGKGAIILPHGVLFRGNAEARIRTELLNLDLIKGIIGLPAN
                     LFYGTGIPACIIVIDKEHAQTAQFAEEGTNQVISGGIKDGNKNRLREQDIHKIIDTFT
                     NLVTAVWCI"
     gene            16905..17219
                     /locus_tag="WJJ54_000175"
     CDS             16905..17219
                     /locus_tag="WJJ54_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit M"
                     /protein_id="HEZ7341097.1"
                     /translation="MVHLSEIAAQDYNLNLPRYIDSGEVEDLQNLAAYLYGGIPAHDM
                     DALEAYWQVLGRMKNELFAEHDGRFTTIQRNRLQIFPTLNSLKSCGIGVEFRANLVQP
                     QI"
     gene            17261..18205
                     /locus_tag="WJJ54_000176"
     CDS             17261..18205
                     /locus_tag="WJJ54_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HEZ7341098.1"
                     /translation="MAHPDYAAFKAGHLAKFAAWHTQNDLAAIQPGRLIRKWSESLLD
                     AFKPGSLIEEYDFYQILTDYWAETLQDDVYLIAQDGWKAVKNLAEITKESDEDANLTV
                     VFEETETGKKGKAKTKRISKKYRSEVIAPELVARRYFSDGIAKLEEKQSELERLSQEL
                     ENHIEEHGGEEGALNDVLDAKGKLSAKLLKTALEESGIEEGERAVLQTTQTLMTQEKA
                     AKDAVKTQIEALNLAVFKQFGRLSEAEIKQLAVQDKWLADLQSRIENRLENSIQQLIS
                     RLNTLEDRYRSPMAELAREVEKWQSKVNAHLENMGFGG"
     gene            18347..18481
                     /locus_tag="WJJ54_000177"
     CDS             18347..18481
                     /locus_tag="WJJ54_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF45 domain-containing protein"
                     /protein_id="HEZ7341099.1"
                     /translation="MTHLLERHRNARFMAHMDNFLPNWQSIKQQLNALELFAQIYNLT
                     "
     gene            complement(18771..19286)
                     /locus_tag="WJJ54_000178"
     CDS             complement(18771..19286)
                     /locus_tag="WJJ54_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341100.1"
                     /translation="MKSKLPLILINFSLISSPLGANAAKIYTCTINGETVYTTKPSKS
                     CHSTDLPPIGNYSSERYIPPQTPEPVSSPSNGGQVVKYKAPVKTVSKPAKSNTPPPQQ
                     APSNNSRRSILETELSNERKALVEAQKMLSQARLAKGGNINHQEINALQSNVLDRQQN
                     IQALQRELGRM"
     gene            complement(19752..21674)
                     /locus_tag="WJJ54_000179"
     CDS             complement(19752..21674)
                     /locus_tag="WJJ54_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ7341101.1"
                     /translation="MIEIKNLTLQRGLKVLLDKANATVNPGQRVGLIGKNGTGKSSLF
                     ALIKGEITQDGGDVSIPKNWRLASVSQETPDLDISALDYVLQGDAELQTLQTALRQAE
                     AQNDGMKQAEYHAKLEEIDAYTAPARAAKLLNGLGFSQEEHSRPVKSFSGGWRMRLNL
                     AQALICRADLLLLDEPTNHLDLETVLWLENHLASLPCTQIIISHDRDFLNAATTQTIE
                     LSQQKLTQYGGNYDFYQNERAQRLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQA
                     QSRMKALAKLERIAPAHLDSEFSFEFYNPEHLPNPLLKLEHADLGYEGKTVLHDITLS
                     LESGARYGLLGVNGSGKSTFIKALAGKIDLLSGSIVRSEKLNIGYFAQHQLDTIRADQ
                     NPVWHIQQLSPEVREQEIRNFLGGFNFAGDMALQKTEPFSGGEKARLALAMIIWQKPN
                     LLLLDEPTNHLDLDMRHALTLALQSFQGALIIVSHDRSLLEATTDSFLLIDKGRLKNF
                     DGDLNDYRQWRLAQENAAAAPAASAQSQSRKDTKRIEAQIRQEKARRGKPIQQKIDRA
                     EKEMAQLSEIQTACEAFLAQEDAYLEANKEKLQNTLSQLAKVKTQLAQIEEVWLACQE
                     ELERIETEIEKQFAER"
     gene            complement(21751..22146)
                     /locus_tag="WJJ54_000180"
     CDS             complement(21751..22146)
                     /locus_tag="WJJ54_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HEZ7341102.1"
                     /translation="MMRQRGKKMLFEENPIDGQFAEYECGAGGIRLAGQSFHKPVLVH
                     KDSVCLSQCRTLSDLTPENLLSDIKPVDYLEILIIGTGAAQEFIHPKIMADFSRIGIG
                     VECMNTDSAFRTLVFLHSEGRRAWAWLQP"
     gene            22319..23626
                     /locus_tag="WJJ54_000181"
     CDS             22319..23626
                     /locus_tag="WJJ54_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEZ7341103.1"
                     /translation="MKPVNIGLLGLGTVGGGTAAVLRDNAEEISRRLGREIRISAVCD
                     LSEEKARQTCPSAAFVKDPFELVAREDVDVVVELFGGTGIAKDAVLKAIENGKHIVTA
                     NKKLLAEYGNEIFPLAEKQNVIVQFEAAVAGGIPIIKALREGLAANRIKSIAGIINGT
                     SNFILSEMREKGSAFADVLKEAQALGYAEADPTFDIEGNDAGHKITIMSALAFGTPMN
                     FSACYLEGISKLDSRDIKYAEELGYRIKLLGITRKTGKGIELRVHPTLIPESRLLANV
                     NGVMNAVRVNADMVGETLYYGAGAGALPTASAVVADIIDIARLVEADTAHRVPHLAFQ
                     PAQVQAQTILPMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQT
                     TAEIVILTHSTVEKHIKSAIAAIEALDCVEKPITMIRMESLHD"
     gene            23619..24053
                     /locus_tag="WJJ54_000182"
     CDS             23619..24053
                     /locus_tag="WJJ54_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341104.1"
                     /translation="MTEPKHEMLTKEQVAARKKAKAKIRTIRIWAWVILALLALTALL
                     SQCAMSKPQAKQKIVESCVKNIPFAEKWQNDLRARGLDSNNTRLAVDYCKCMWEQPLD
                     RLSEKQIRSFGKLGAQEQLDLLGGANAFEARDKQCVADLKSE"
     gene            complement(24112..24381)
                     /locus_tag="WJJ54_000183"
     CDS             complement(24112..24381)
                     /locus_tag="WJJ54_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEZ7341105.1"
                     /translation="MNKSELIEAIAQEADISKAAAQKALDATTNAVTTALKQGDTVTL
                     VGFGTFYVGERAERQGRNPKTGEPLTIAAAKTPKFRAGKALKDAL"
     gene            complement(24563..27025)
                     /gene="lon"
                     /locus_tag="WJJ54_000184"
     CDS             complement(24563..27025)
                     /gene="lon"
                     /locus_tag="WJJ54_000184"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEZ7341106.1"
                     /translation="MTQKEKHFEEYAALATLPLRDVVVYPHMVLPLFVGRPKSIAALE
                     NAITREEPVFLLAQTDAAVEEPVAADLYQTGTVAQVLQVLKLPDGTVKVLVEGLYRGR
                     VLTIEDTGGLFVSHIEAVVEEDTGGNTDLEAVRRTLLAQFEQYAKLNKKIPAEIIGSI
                     NGIAENSRLTDTVAAHLQLKLTQRQQILEISEIGKRMEFLLAQLESELDIMQAEKRIR
                     GRVKRQMEKSQREYYLNEQIKAIHKELGEEDENGELDALEAGIKKAGMSKEAEEKCLS
                     ELKKLKMMPPMSAESTVVRNYIDTLLELPWKKKSRVSKGIAKAGLVLDADHYGLEKVK
                     ERILEYLAVQKRMDKLKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDES
                     EIRGHRRTYIGSMPGKILQNMAKAGVKNPLFLLDEIDKLGSDFRGDPASALLEVLDPE
                     QNNKFADHYAEVDYDLSDVMFIATSNSLNIPTPLLDRMEIIRLSGYTEDEKINIAMQY
                     LVPKQMKRNGVKEGELAIEESAVRDIIRYYTREAGVRSLDREIAKICRKVVMQITLDE
                     DKKRLSETKKTSKAKPKAVKVNEKNLHDYLGVRRFDYGVAESENRIGQVTGLAWTEVG
                     GELLTVEAAALPGKGVIQCTGQLGDVMKESVSAAWSVVRSRAESVGLAPDFYEKKDIH
                     VHVPEGATPKDGPSAGIAMTLAMVSAFTKIPVRADVAMTGEITLRGEVLPIGGLKEKL
                     LAALRGGIKHVLIPKDNLKDLEEIPENVKTGLTIHPVKWIDEVLALGLESQPEPWAEP
                     SGAEAAAESASKPKPRSRATKH"
     gene            27276..28379
                     /locus_tag="WJJ54_000185"
     CDS             27276..28379
                     /locus_tag="WJJ54_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ7341107.1"
                     /translation="MSSFIFPDNGFEWRNESLQKPPKGWHYVRESGANGILKAAYQNI
                     ATVWQGDFHNAKQVLSAMKKKVRKPAAVRSDADIAALFHAHRMKQAQQSRILNMLAVE
                     IRPGFVLDNKRAPDIRAALLDVYGEADGKPFFLPLNLLLGFMGAHEWHKKGVAVPQLG
                     SSIHVPFGVFSPLRGEYLDLLAHAPSTGFQTAFDIGTGSGVLAAILAKQGIPSVIGTD
                     TNPKAVACARANIARLGFEKQVEIRETDLFPEGFADLIVCNPPWLPAKPTSAVESALY
                     DPESAMLAAFLRDAPKHLNPDGEIRLIISDLAEHLHLRPSDFLDKAFAQADLRVADVL
                     KTKPVHKKAADPDDPLAFARNRETTFLYRLKKA"
     gene            complement(28451..30196)
                     /gene="recD"
                     /locus_tag="WJJ54_000186"
     CDS             complement(28451..30196)
                     /gene="recD"
                     /locus_tag="WJJ54_000186"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HEZ7341108.1"
                     /translation="MERQTDEFAQAAARAAIRFLEHYAGSGDEVLANCTERLFQALQN
                     GHSFIRLSGGEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAA
                     GTSAPDATGARQNLAKWFQGAGSEGQRDAAALALLQSFMVITGGPGTGKTTTVAKLLA
                     LICGEDENLPHIALAAPTGKAAAHMARALHRAINGFDAPEAVRRHLLKLEGQTVHRLL
                     KLRPPKMQAAFDHIRPLPFDVLIVDEASMLDTALMLQLLKAVKTGARVILLGDENQLP
                     SVGIGAVLSVLSQKTVLDGETHQRLAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGD
                     NSGIGCLARAAVSGDEGAWALFDQFPDELEHSECSPNARVERLYRAHKAYWQAVKDGN
                     IEAAYAGISDIVVLAAWRQDAEDFNEAYCRHVRRKMNIPEHQAYFAGEPIMIRQNDYA
                     LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPDFEPAFAMTVHKSQGSEY
                     REVWLLPPSAAPSDEGDDALSGLSKELLYTAITRAREKFVFFGGEETFRQAAATVKTR
                     QTALGSMLERVFSQE"
     gene            complement(30264..30959)
                     /gene="lolD"
                     /locus_tag="WJJ54_000187"
     CDS             complement(30264..30959)
                     /gene="lolD"
                     /locus_tag="WJJ54_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HEZ7341109.1"
                     /translation="MSELILKCEGVGKRYRDGGLDVRVLHGLDLEIRAGESTGIIGSS
                     GSGKSTLLHILGGLDMPSEGRVLLMGEDLRTLNQRRLGDLRNRHLGFVYQFHHLLPEF
                     SALENVMMPLLIGKKSREEAAETAMSMLDKVGLKHRSTHRAGELSGGERQRAAIARAL
                     VTQPKCLLADEPTGNLDRANARNVLDMMLELKTELGTGLVVVTHDDELAGRFGRVMVM
                     KDGSLHPKQGANA"
     gene            complement(30952..32199)
                     /locus_tag="WJJ54_000188"
     CDS             complement(30952..32199)
                     /locus_tag="WJJ54_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HEZ7341110.1"
                     /translation="MFSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVL
                     SVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQAL
                     LANAGEIRGVQMRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAE
                     VGNKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLD
                     KEVAGLRLKLADPQNAPALTATLIPEAQRDTVWVRDWTFSNRSYFEAVELEKRMMFII
                     LTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPGGVMKIFMVQGAFSGFFGTLA
                     GVVCGVLLGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACISLGLS
                     FVATLYPSRRASKTQPAEALRYE"
     gene            32404..32682
                     /locus_tag="WJJ54_000189"
     CDS             32404..32682
                     /locus_tag="WJJ54_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341111.1"
                     /translation="MNIRTAFALCAIALSAAAAAYAKEIKIDANNTPYSEADAQKLAA
                     TAVGMGVKEPISLNGGSDSITVSGSSATQCVFKVGNGGALQIQGLNCK"
     gene            complement(32738..33355)
                     /gene="recR"
                     /locus_tag="WJJ54_000190"
     CDS             complement(32738..33355)
                     /gene="recR"
                     /locus_tag="WJJ54_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEZ7341112.1"
                     /translation="MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEK
                     LVDALQTALKQVDHCAMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCH
                     DGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSE
                     FFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLIKEGGA"
     gene            complement(33422..34960)
                     /locus_tag="WJJ54_000191"
     CDS             complement(33422..34960)
                     /locus_tag="WJJ54_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEZ7341113.1"
                     /translation="MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGD
                     EKISDHSINNAIQNEQADGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIV
                     DDPNFHDANGKFDHALLNRYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQ
                     AEQLIRLTQVNRTIRSHTFNPDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVA
                     LNLKDFADKQTVSETEVKNAFEERVARLPTNEAKPSFEQEKAAVENELKMKKAVADFN
                     KAKEKLGDDAFNHPSSLAEAAKNSGLKVETQETWLSRQDAQMSGMPENLINAVFSDDV
                     LKKKHNSEVLTINSETAWVVRAKEVREEKTLPFAEAKDAVRQAYIRTEAAKLAENKAK
                     DVLTQLNGGKAVDVKWSEVSVLGAQQARQSMPPEAYAELLKAKPANGKPAYVRLIGLP
                     APVIVEVQAVTPPDDIAAQLPLAKQALAQQQSANTFDLLIRYFNGKIKQTKGAQSVDN
                     GDGQ"
     gene            complement(35020..35394)
                     /locus_tag="WJJ54_000192"
     CDS             complement(35020..35394)
                     /locus_tag="WJJ54_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HEZ7341114.1"
                     /translation="MIVLHGIPNCDTVKKAKNRLAGYGLEFEFRDFKKQMPSEAEICS
                     WLEQVPLETLLNKRGTSWRKLDAETQQKALSSTAEAVKLMSEMPSLIKRPVLECGGKV
                     YAGFSEETYDGIFNRQAPCRQG"
     gene            35545..37173
                     /locus_tag="WJJ54_000193"
     CDS             35545..37173
                     /locus_tag="WJJ54_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HEZ7341115.1"
                     /translation="MISTNGITMQFGAKPLFENVSVKFGEGNRYGLIGANGSGKSTFM
                     KILGGDLEQTAGEVAIENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAI
                     YANLEATEDDYMKAAELEAKFAEYDGYTAEARAAELLSGVGISEDLHNATMAEVAPGF
                     KLRVLLAQALFSKPDVLLLDEPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEV
                     CTHMADLDYNTITIYPGNYDDYMLASAQSRERALKDNAKAKEKLQELQEFVARFSANK
                     SKARQATSRLKQADKIKSEMVEVKPSTRQNPYIRFEADEKAKLHRQAVEVEKLAKRFE
                     TQLFKNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAYNPEYSDGLLPDEGTIKWAEK
                     ASVGYYPQDHENDFDVDMDLSEWMRQWGQEGDDEQVIRGTLGRLLFGSNDVVKKVKVL
                     SGGEKGRMLYGKLLLLKPNVLVMDEPTNHMDMESIESLNMALEKYNGTLIFVSHDRQF
                     VSSLATQIIELDGKGGYEHYLGDYESYLEKKGVA"
     gene            37245..38498
                     /locus_tag="WJJ54_000194"
     CDS             37245..38498
                     /locus_tag="WJJ54_000194"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HEZ7341116.1"
                     /translation="MQTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGK
                     DFPVFLHPETHEEYALARTERKTAKGYAGFSFHADKDVTLEQDLMRRDLTINAMAQDA
                     DGKIIDPFGGQRDLAAGILRHVSPAFAEDPVRILRTARFAARYGFEIAEETMKLMRQM
                     VANGEADALVAERVWQELAKGLMEKNPRKMIEVLRECGALKVLLPEVDALFGVPQRAD
                     YHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPSDILPRHHGHDLAGVE
                     PMREVNQRLRAPKHCAELAELVCRWHIIFHQVGQLKSQTILNVLKKTDAFRRPERFQT
                     ALNVCIADTQGRLNREHTPYPQRAHWLALLEAANQADSGKIAAECRAQGKAHLIAEQI
                     DRARLAQIAPLQKAFRAAQDKTEKH"
BASE COUNT         8717 a         9953 c        10307 g         9538 t
ORIGIN      
        1 taccgcaaaa cataccataa aagaaacggt aacggatagt tgtaagcggt tgatgacgat
       61 tatagacaat aacgggtttt cccaatgaaa ttattgtttg aataataaaa aatcccaaac
      121 cgtaaaagtt tgggatttgt atttggcaga gaggaaggga ttcgaaccct cgatacgcta
      181 ttcacgtata cacgctttcc aggcgtgcga cttaaaccac tcatccacct ctctaatggc
      241 ggaaattatc ccaatcggga taatttatta tttggtgccc aggagaagac tcgaacttcc
      301 acacccgtga ggataccagc acctgaagct ggcgcgtcta ccaattccgc cacccgggca
      361 atctaaatat tgaaataaag caaagcattt gatttggtgc ccgggagaag actcgaactt
      421 ccacacccgt gaggatacta gcacctgaag ctagcgcgtc taccaattcc gccacccggg
      481 ctttgcttta tttgctgttt tgcggtacag tgtcctgccg caaagaagtc gctattatat
      541 agttcataaa gagaatgtca acagtccaaa tgaataaaaa tattaaatct ttaaatttac
      601 gggaaaaaga cccgttttta agtcgtgaaa aacagcgtta tgaacatcct ttgcccagtc
      661 gggaatggat aatcgaattg ttggagcgca aaggtgtgcc ttcaaaaatc gaatcgcttg
      721 cgcgcgagct gtcgattacg gaagacgagt atgtcttttt tgaacgccgt ctgaaggcga
      781 tggcgcggga cggtcaggtt ttaatcaacc gtcggggcgc ggtttgcgcg gcggacaaat
      841 cggatttggt caaatgccgc atcgaggcgc ataaggacgg tttcggtttt gccgtgccgc
      901 tcacgcccgc caaagacggt gattttgttt tgtatgaacg ccagatgcgc ggcattatgc
      961 acggcgatat tgtcactgtt cgtcctgccg gcatggaccg taggggccgc cgcgaaggga
     1021 cggttctgga tattgtcgaa cgcgcgcaaa gcaaagttgt cggccgtttc tatatggata
     1081 ggggcgtggc gattttggag ccggaagaca agcgtctgaa ccaaagcatc gtattggaac
     1141 cggacggcgt ggcgcgtttc aaacctgaat ccggtcaggt catcgtcggc gaaattgagg
     1201 tttatcctga gcaaaaccgg ccggcagtgg caaaaatcat cgaagttttg ggcgattatg
     1261 ccgacagcgg catggagatt gaaattgccg tgcgcaagca tcatttgccg caccaattca
     1321 gtgaagcgtg tgccaaagcc gcgaaaaaaa ttcccgacca tgtacgcaaa agcgatttga
     1381 aaggccgcgt cgatttgcgc gacctgcctt tggtaacgat agacggcgaa acggctcgag
     1441 attttgacga tgcggtgttt gccgagaaaa tcggacgcaa ttaccgtctg gtcgtggcga
     1501 ttgccgatgt cagccattat gtccgccccg atgacgctat cgacacggac gctcaggaac
     1561 gcagcaccag tgtttacttc ccgcgccgcg tgattcccat gttgccggaa aacctgtcca
     1621 acggcatctg ctcgctcaat cctcatgtcg agcgtttgtg tgtggtgtgc gatatggtta
     1681 tcacttacgc gggcaatatc aaagaatacc gcttctaccc cgccgtgatg cgctctcatg
     1741 cccgcctgac ctacaaccaa gtttggaaat ggctttcagg cggcatcgag catccgttca
     1801 aaacccaaat cgacacgctt tacaaactct tcaaaatcct tcagaaaaag cgtttcgaac
     1861 gcggggcggt ggagtttgac agcatcgaaa cccaaatgct tttcgacgac aacggtaaaa
     1921 ttgaaaaaat cgtccccgtt gtccgcaacg atgcccacaa gctgattgaa gaatgtatgt
     1981 tggcggcaaa cgtttgcgca gcggattttc tgttgaaaaa caagcatacc gcattgttcc
     2041 gcaaccattt ggggcccacg cccgaaaaac tcgccgcctt gcgcgagcag ctcggtctgt
     2101 tggggcttca acttggcggc ggcgacaacc cgtcgccgaa agactatgcc gcgcttgccg
     2161 gacagttcaa aggcaggccg gatgccgaat tgctgcaagt catgatgttg cgctccatgc
     2221 aacaggcggt ttacgaaccg cattgcgacg gacactttgg tcttgcctac gaagcatacg
     2281 cccacttcac ctcgcccatc cgccgctatc ccgacctgac cgtacaccgc gccatcaaag
     2341 ccgtgttgaa tcagcaaacc tacacgccaa aaaaaagctg gcaggctttg ggcgtgcata
     2401 cctcgttctg tgagcgccgt gccgacgacg ccagccgcga cgtggaaaac tggctgaaaa
     2461 cctattatat gcgcgataag gtcggcgaag tattcgaagg taaaatctcc ggcatgacca
     2521 gttttggtat ctttgtaaca ctggacggca tccacattga cggcttggtg catatcagcg
     2581 atttgggcga agactatttc aacttccgcc ccgaaatcat ggcaatcgaa ggcgaacgca
     2641 gcggcatccg tttcaacatg ggggacaggg ttgccgtccg ggtcgcccgt gccgatttgg
     2701 atgatggaaa aatcgatttt gtcctgattg ccgaggggag cggcaggggg cggaaagcta
     2761 aatcatccgc gtctgtcaaa ccggcaggga cggcggggaa agggaaaccg aaaaccgccg
     2821 ccgagaaaaa aacagcccga ggcggcaaag taaggggaag gggcgcgtct gccgccgcag
     2881 aatcggggaa aaaggcaaag aaaccggttc cgattaaggt aaaaaaacgg aaaggcaaat
     2941 cataatgctg acggggtggc ttggggaggg cggggcatac tttcccgaag ccgccgcccg
     3001 attttttgat atggcggccg gcgcatcatt tcaggccaat cgaaacgccc gtattgaaag
     3061 attgcgttta tttccaccgc cgttttgaag gccggcggta ttcggcagac ggggcgcaaa
     3121 cggcgttcag acggcatttt cattctttcg gcgtgtccgt ccgaattgct ttgcccgtcc
     3181 gcgcaatcag cctgtgcggc ttgccttgaa cagacaaaaa atgccgtctg aaacccggaa
     3241 atcaggtttc agacggcatt ttgccttgaa aaggctgttc aaatcagcga tggtagttcg
     3301 gtgcttcttt ggtaatttga acgtcgtgaa cgtgcgattc gctcatacct gcggaagtga
     3361 tttccacaaa ttcggctttt tcgtgcattt cggcaatatt ggcgcaaccc aaatacccca
     3421 tgctggagcg cagtccgccg gtcagttggt ggatgatgtt cacaatcggg cctttgtaag
     3481 gcacgcggcc ttcgatacct tcagggacgt atttgtcggt gctgtcggtt ttgtcttgga
     3541 agtagcggtc ggcagaacct tggctcatcg cgcccaagga acccataccg cgataggatt
     3601 tgtacgagcg gccttggtag agttcgattt cgcccggtgc ttcttccgtg ccggcaaaca
     3661 taccgccgag catgacgctg tacgcgcctg cggcgagggc tttggcgatg tcgccggaga
     3721 agcggatgcc gccgtcggca atcagcggaa cgcccgtgcc tttgagggct tcggcaacgt
     3781 tgtgaatggc ggtcagttgc ggcacgccga cacctgccac gatacgggtg gtgcaaatcg
     3841 aacccggacc gataccgact ttgacggcat ccgcgccggc ggcgaccaaa tccaatgcgg
     3901 ctttggcagt ggcgatgttg ccgccgatga cttggatgtg cggataggtt tctttcaccc
     3961 atttcacgcg gtcaatcacg ccttggctgt gcccgtgggc agtatcgacg acaatcacgt
     4021 ccacgccggc ttcgaccaag gctttgacgc gctcttcggt atcgccgccg gtgccgactg
     4081 ccgcaccgac gcgcagacgg ccttcggagt ctttgttggc gttgggaaac tcggtggttt
     4141 ttaaaatatc tttaacggta atcagacctt tgagttcgtc tttttcgttc agaaccaaaa
     4201 cgcgctcgac tttgtgcgtg tgcatcagtt cgcgcgcttc gtctatgctt gtgccttcgg
     4261 ggacggtaac caaacgttcg cgcggggtca taatggcgga aacgggcaaa tcgacgcggt
     4321 tttcaaaacg caggtcgcgg ttggttacga tgccgacgac tttgccgttt tcaacgacgg
     4381 gcaggccgga cattttgcgt ttgcgctgcg cacgcatttc caagacttcg cggatgagcg
     4441 tcgtcggtgc aacggttacg gggtctttga ccacgccgct ttcgtggcgt ttcactttgg
     4501 aaacggcgcg cgcctgcatt tcgggcggca tgtttttatg gatgatgccg atgccgcctt
     4561 cctgtgccat cgaaatggcg aggcgcgcct cggtaacagt gtccatcgca gcggaaagca
     4621 gggggaggtt gagtgtgatt tcgcgggtga gcttggtttg aagtttaacg tctcgcggca
     4681 gcacggtcga atgtgcggga accaacaaaa catcgtcgaa agtataggct ttttctacga
     4741 tacgcataat gctcggtctt tcagtttgtg caagatgcac ggcattatag cacgttaccg
     4801 gcggcttgac agtttatcag gtttaatttt ggtccccttt gaatagcccg gttttccttt
     4861 gccgaccact gttgctcccg ttctttcaat ttcaggaaaa gcttttttct aatttttggt
     4921 aagtggctca gttattgaag ccctatatcg ggcggtaact tccagcacaa aaaaacggag
     4981 tagttcttta tttatttttt cctttaattt tcagtatatt atcttaatat ttcgagggta
     5041 acatatctgc taatctagtt acagccccat atattataga ttcaattgaa aaataacaga
     5101 ttcaactgta cctttcttat acctgatttc tttaaagttt ttcccattgt caaaactata
     5161 aaaaagtctc tcttcctcac cagaatatcc catttctaat actaaacaat ctatttcaca
     5221 attaccccct ccactcatat atgtagtatc aatagaaaat atattgcata attccagaga
     5281 attatattta tctatatcaa atagttgctc tccaaaatct aaaccattgt ttccacctgc
     5341 ataatacttc tcttcaaagg atgacttcaa actattaaaa actgcattta gcgtaaaata
     5401 tccatatggg catatcttag gatatatatt ctctcctatt attatctgaa tttttccata
     5461 aataaaacca ttacattcag agttttcttc ccataaaatc ccaaattttc ttgttgagtc
     5521 cataataata ttcatataaa tccttatatt aataaattat ttacaatatc ccccgctttc
     5581 agacggcata cggcgtggcg gcggaatgcc gtctgaaggc gggcgttatg ataattgttc
     5641 cagcagcgtc tgcttcaatg aggactggat ttttgggttt ttcaggtcta ggctaaaaac
     5701 ggtaaaactg tcttcggcgc gttcatccag tgtggagatt ttggcatagc gcaggctgac
     5761 gttgtgggcg aaaaagactt ccgccatatc ggcgagcagg aaggggcggt tgacggcggt
     5821 gatttcgacg gagtaccaat cggggtagtc ttcttcgggg gtgatggtga tgcttggcgc
     5881 gatcggcata tagcggctgc ggcggctgat gcggcggcta tggctggaga tttcggcaac
     5941 ggtgtgtccg tggataaagc tgttgagttc ggcttcgagc gcgctttgga tgtcggggta
     6001 gtcttcggga gcgtgctgcg aggggatttg cacgatgaag gtgtcgagga tgtagtcgtg
     6061 ttcggtgata aaggcgcggg cggcgaggat atcgaagccg tggcggctga aaatgcggca
     6121 gaggcgggcg aacaggcgcg ggccgttggg catgaaaacc atgacttgaa agctgttgct
     6181 tttgggcagg atgcggctgc ggacgatggg ggtttcaaaa tcgtgtacga ggttggcggc
     6241 gtgccacagg atttcgcggg actggtggcg ggcgaagtag gcggaaccga gcgcgttcca
     6301 tagttttttc tgctgttttt cggggacggc ggcgcgggtg agtaagtcgg cggcttcctg
     6361 ccggcggcgg ccgaagaggg tgtgcgggtt gccgccgttg cctgtaaggt agcgtccggc
     6421 ggcatggaag aggctttcca gcaggctggc gcgccatgcg ttccacagct tgggattggt
     6481 gccgcgtatg tcggaaatgg tcagaaggta gagcgcgctg aggcgttcgt gggtttggac
     6541 gcgtttgcag aaggcatcga gtacgctggg gtcttggatg tcttcttttt gggcgacggt
     6601 ggacataaga agatggtttt caaccagcca ggcgagcagg tcgctttctt cttcggtcag
     6661 gaagtggtcg gcggcaaatt ggcgcgcgtc tgcgatgcct tgtatggcat ggtcgccgcc
     6721 gcgtcctttg gcgatgtcat ggaaaaaggc ggcaaggtag aggatgtctt gtttttcaaa
     6781 ggactgcatc agtgcagagg cgtagggcag ctcgtggctg tgcatatcca aggcaaggcg
     6841 gcggacgttg cggacgacgg tgaggatgtg gtcgtccacg ggatagatgt ggaacaggtc
     6901 gtgctggagc aggccgacga ttttttccca cgcgggcagg tagcgtccca atacgccgta
     6961 gaggttgagg aagcgcaggg tttgggtcag tccgttgccg ttgcggaaaa agccggcgaa
     7021 gcggtggcgg ttttcagaat tttggtagaa gctgcggttg attttgcgcg tcgcgcccca
     7081 ccatgcgcgc agggtttgcg gttcgagcgc ggtaatatcg ttgcgctgct gcatgatttc
     7141 gacgattttg aaaatgtgtt cgggccgtct gaaaaaaata tcggtgtgcc gcgcggcaat
     7201 ttggttgttg acttggatgt agtcgtcgtc aatccgcagg gtaacgcgca acggggtgga
     7261 ggaaacgcgg ctttgcagca taggcgtgag gatgccgccc agttgtttga cggttttaat
     7321 cgcgcggtaa aacacgcgca tcagttcttc gctttggcgg cggaggttca agccttcata
     7381 acccatgctt tcggcgactt gcggctgcaa atcgaacagc aggcggtctt cggcgcgctt
     7441 ggcgtttaaa tgcagatgga tgcggatgtg ggcgaggcgg cggtagccgt gcgaaagcat
     7501 accggcttcg gcacgcgtca aaatccgctg tttgagcagg tcgggcaggt cggtcgccaa
     7561 gccttgcgcc ttcgctatcc aaagcagggt gtggatgtcg cgcagaccgc ccggacagct
     7621 tttgatattc ggctccaata ctgcccccga accttgcgat ttggcgtggc ggtgttccat
     7681 ctccaccagt tttgcctcga caaacgccgc cacattgcgc tgcgcgttca tttttttcgc
     7741 cagttcgtcc gccgtttggc ggttgccgaa caaaaaacgg gcctctaaaa acgccgtgtc
     7801 ccccgtaata tcgtcgcgca cgctttcgca cagttcgcca atgccgccgc tttttacaga
     7861 cggcatcagt ttgcagtccc atagggtttg aacaaaccgg gcaatctgtt cctgaatgcc
     7921 gtctgaaagc ggggcagggg agacaaccgc caaatccaca tccgaacagg gatacagttc
     7981 gccgcgcccg aagccgccca ccgccatcag gcataacgcg ctgttttgaa aatactctgc
     8041 ccacaatgcc gccagtaagg tttcgactgc cgccgtgtat tctctgaaaa ataccgacac
     8101 gcggttggct ttcaaataat gcgcttcggc ggcatcgcgc tgctgtttga aggtttccag
     8161 tgctgaagac aggtttgcag gcatttttat tctttcgatt ggcgggaaaa aaggagacgg
     8221 atggttcggc ggtcaaatac cgctttcaga cggcatttgt cgggtatcgg cggaattggt
     8281 catcaggttc aaccgttcct gcggcggcag cagcaactga tacgccgcca cgcccaaagc
     8341 cgccgccatt ttttcgatat tcgacagggc gatgttccag cgtttgcgtt cgactgccga
     8401 cacataagtc ctgtccaaac cgcattgccg cgccaattct tcttgcgacc aacccttgtt
     8461 cacgcggaaa agccgcatat tgtatgccaa taccgcccgc aaatcctgtt cgtcaggcag
     8521 ttcggcaggc agagtcaatt tgttgcccat catttgcttc caaataaatg gttaaagtta
     8581 agcatttgct gttacggatt ttacttcaca taaaagccaa aaaaaagggg tggcggcagc
     8641 cacacccaaa cacacacaca tcaagaggaa agaggtaaca tcaagacaga ttgggaaaca
     8701 gcaaacaagc aatctagatt tcatatcggt attatcaaac aaaaaccgtt atcgagtatt
     8761 gattcaaatc aatttagatt tgattcgcaa accggcaaag aaaaacggca tacccgttta
     8821 tacggatatg ccgtctgatg atgcagggga ctgctgtatt tggcagtggt ttgtgtttta
     8881 gtcctcttgc gccgctgttt gcaggtagtt cggcaaacca attttgccga ttagttcctg
     8941 ctgggtttcg agccagtcga tgtgttcttc gttggtgtct ttttgttttt ccaacaaatc
     9001 acggctgaca taatcctgtt gcgcttctgc cacggaaatt gccgcaatca atgcctcatg
     9061 tttttctttc tctttttcca aatcgcaggc gatgatttct tcggtggact cgccaatcag
     9121 aagcttgccc agttcttgca ggttcggcag accttcgagg aacagaatgc gctcgatcaa
     9181 atcgtcggca gctttcattt caacgatgga ctgtttgaag aaatgttcgc ccagttcttc
     9241 aaagccccag tttttcaaaa tacgggcgtg aaggaaatat tggttgatgg ttaccagcag
     9301 caagcctaag tttttgttta gctcgcggat aaccagacgg tcgcctttca tacggactcc
     9361 ttttattccg aatacggatt acagttggct ttggtagtag ttgccttcgc caattaactc
     9421 gatcaggcgc agctgctgtt ccagccagtg ggcgtggtct tcttcggtat ctttcagttg
     9481 ggcaaccatc aggtcgcgcg taacatagtc ttgagcctct tcgcacagtt tgatgccttt
     9541 tttcaacgca tcacgtactt cgtattcggt ttgcaggtcg gctttgaggc aggaaaccac
     9601 gtccgtgccg atattcagtt cggcgcgcgc cattttcggc gtgccgccca gcatcaggat
     9661 gcggcggatg aagtcttcgg cgtgtgtggt ttcttcttcc atctcgtgat tgagacgttc
     9721 aaaaagtttg gtgtagcccc attcggagta gaggcgggag tggataaagt attggtcgcg
     9781 tgccgccagc tcgccagaca gcaattcgtt catataatca acaacagctt gattgccttg
     9841 cataatatct ctctttctgt aacttggttt tcggtatgtc tgaacagcat ctgtgtcgct
     9901 attcgggatg cgtgcattgt atgcaaaagc tgtcggcatg acaaattttc tatttaaaat
     9961 acaaacaatt atcaaaagaa atagggcgta ttccccgatg ccttccaaat cagtatgctg
    10021 tttcttatcg gtttttttgc tgctaaaact aagaatccat ctcatccata aagaacattt
    10081 acacttatta accatagcga aaagcaaata ctgtacggtt ttttatcaaa atttataatg
    10141 aatcgttctc attaaccgac agattctttt gagattatcg gattttggga ataaattatg
    10201 ccgtctgagg ggctttcaga cggcatagac aattaaagct gattaaacaa cgcggcagac
    10261 agcagcgtag gaaattattt tttacttcgg aacggtattt tgggtttaat gatgcccgca
    10321 accgccgtgg ctttcgcgta aggcttcggc agcctgttcg tcggcgtggt agctggaacg
    10381 taccatcgcg ccgatggcgg cattgctgaa gcccagttcg tatgcttctt tttcaaagat
    10441 tttgaactgc tcgggcgtaa cgtagcgcag gacgggcagg tgtccgtctg aaggctggag
    10501 gtactgtccg atggtaatca tttcgatatt gtgcgcccgc atatcgcgca taatttcacg
    10561 cacgtcttcg tctgtttcgc ccaagccgac catgatgccg gatttggtcg ggatgtgcgg
    10621 catcatttct ttataacgtt ttaataagtc taaagaatgt tgataattgg caccgggacg
    10681 ggcttttctg tacaggctcg gatgggtttc taggttgtgg ttcatcacgt cgggcggggt
    10741 ttcggcaagg attttgagtg cgatgtccaa gcgtcctcgg aagtcgggga cgaggatttc
    10801 gattttggtg ttcgggctgg tttcgcggat ggctttgatg cagtcggcga aatgctgtgc
    10861 gccgccgtcg cgcaggtcgt cgcggtcgac ggaggtgatg acgacgtaac gcaggttcat
    10921 ggctttgacg gattcggcga ggtttctcgg ttcgtcgggg tcgagcatat tgggccgacc
    10981 gtgtcccacg tcgcagaacg ggcagcggcg ggtgcagatg tcacccataa tcatgaaggt
    11041 cgccgtgcct ttgctgaagc attcgccgat gttggggcag gaggcttcct cgcaaacggt
    11101 gtgcatcttt tgttcgcgca aaatgtcttt gatttcaaag aatttgcgcg atgggagttt
    11161 ggcgcgtatc cattcgggct ttttcagttt ttcctgaagg gggacgactt tgatggggat
    11221 gcgcgcggtt ttgtccgcgc ctctgagttt gatgccgcgt ttggggtcgt cggttttgat
    11281 ttcactcatt gttgtctgct ttcggtgtga attgtgtttc aaggtgtgcg gtaagtttgg
    11341 cggcgacttc gtccggcgtg gggcagggtt ggacaaaatc cgcgatttgc gtcatttcca
    11401 taccggcgta gccgcagggg ttgatgtggg taaacgggct taaatccata ttgacgttga
    11461 gcgcaagccc gtgatagacg gagccgtttt tgatacgcag ccccagtgag gcgattttgc
    11521 gttcgccgac gtaaacgccg gggcgtttgg ggtctgccgc cgcttcgatg ccgtattccg
    11581 ccaatgtggc gatgatgctg ttttcaagcg cggaaacgat gttgcggacg ctggttttgc
    11641 gccgtttgaa atcaatcatc gtataaacga ccaattgccc gggtccgtga taggtaatct
    11701 gcccgccccg gtcgatttgg acgacgggga tgtcgtccct aatcagcagg tgctcgggtt
    11761 ttcccgccag tccttgtgta aagacgggcg ggtgttcgac gacccacagt tcgtcttcgg
    11821 tgtcagcatt ccgtccggca ttaaaggttt tcatcgcttc aaaagtcggc agatattcga
    11881 ccaaaccttt gtgtatgatt ttcatctcaa agtaccactt tgaccagttc gtgcgaagtc
    11941 agcgcgcggt agatgttgtc caattgttct tggttttcaa cctttacctg tacggtggcg
    12001 ccggtatagt tgcctttgct gctcggacgc gtggtgatgt ggtgcgcctg cgtgtcgggg
    12061 gcgtggaggc ggacggtgtc caataccgcc tgctcgaact cgggatgcac cgcgcccatt
    12121 actttcaatg ggaaggtgca gggaaattcg atgagggatg ttttgttttt ttgttcggtc
    12181 atgatgtgct gccttgtcgt gtacggtatg ccgtctgaag gcgggtttgc ctttcagacg
    12241 gcatcggatg tgcgttattt tagcctaaac cgcgataaca ggctatcggg aaggcggagg
    12301 cttttttgac ggcgcggcgg ttctgctata ctggcgcgca atattatttt tagaagggtg
    12361 gtttttatgt atcggaggaa agggcggggc atcaagccgt ggatgggtgc cggtgcggcg
    12421 tttgccgcct tggtttggct ggttttcgcg ctcggcgata ctttgactcc gtttgcggtt
    12481 gcggcggtgc tggcgtatgt attggaccct ttggtcgaat ggttgcagaa aaagggtttg
    12541 aaccgtgcat ccgcttcgat gtctgtgatg gtgttttcct tgattttgtt gttggcatta
    12601 ttgttgatta tcgtccctat gctggtcggg cagttcaaca atttggcatc gcgcctgccc
    12661 caattaatcg gttttatgca gaacacgctg ctgccgtggt tgaaaaatac aatcggcgga
    12721 tatgtggaaa tcgatcaggc atctattatt gcgtggcttc aggcgcatac gggagagttg
    12781 agcaacgcgc ttaaggcgtg gtttcccgtt ttgatgaggc agggcggcaa tattgtcagc
    12841 agtatcggca acctgctgct gcttcccttg ctgctttact atttcctgct ggattggcag
    12901 cggtggtcgt gcggcattgc caaactggtt ccgaggcgtt ttgccggtgc ttatacgcgc
    12961 attacaggca atttgaacga ggtattgggc gaatttttgc gcgggcagct tctggtgatg
    13021 ctgattatgg gtttggttta cggcttgggg ttggtgctgg tcgggctgga ttcggggttt
    13081 gccatcggta tgcttgccgg cattttggtt tttgttccct atttgggcgc gtttacagga
    13141 ctgctgctgg caaccgtcgc cgccttgctc cagttcggtt cgtggaacgg catcctatcg
    13201 gtttgggcgg tttttgccgt aggacagttt ctcgaaagtt ttttcattac gccgaaaatc
    13261 gtgggagacc gtatcgggct gtcgccgttt tgggttatct tttcgctgat ggcgttcggg
    13321 cagctgatgg gctttgtcgg aatgttggcc ggattgcctt tggccgccgt aaccttggtc
    13381 ttgcttcgcg agggcgtgca gaaatatttt gccggcagtt tttaccgggg caggtaggcg
    13441 gttccgaaac atatttgaag cggaatacaa ccttgcccgg gtttaaataa aaatgccgtc
    13501 tgaaccccga aaacagagct tcagacggca ttttcatcac ggcttatttg gcggttttgc
    13561 tgctgtcgat aattttcata ccggcagaaa tcaggctgcc gatgtcggca acattggcgg
    13621 gcataatcag cgtattgctt tctttggcaa gattgttgaa cgcggcgacg tattgttccg
    13681 caatcttcag attgaccgca tccgcaccgc cttgggtttg aagggcggcg gcaatttgac
    13741 ggatggcttc ggcattggct tcggcaacaa ggcgcaagga ttccgcttca cctttggcgc
    13801 ggttgatgcg ggcgattttt tcggcatttg acgcattgac cgcagcctga gcctcgcctt
    13861 cggattgttg gatttcggct tcgcgctgac cactggcaag gttgatttgt tcgattttac
    13921 gaccttcgga ttcggcgata cgggcgcgtt tttcgcgttc ggcagtaatt tgcgcctgca
    13981 ttgagcgaag gatttcttgc ggcggaacca agtctttaat ctcataacgc aaaaccttca
    14041 caccccaagc cccggccgcc tcgtccaaag ccgcaacaac agtactgttg atttcgtcgc
    14101 gttcttcaaa cgttttgtcc aactccatac gcccgataac ggaacgcagc gtcgtttggg
    14161 caagctgggt aattgccatg atgtagttgc tcgaaccgta tgaggcgagt ttggggtcgg
    14221 ttacttggaa atagatgatg ccgtcaacag tcagctgcgt attgtcgcgc gtgatgcaga
    14281 cctggctggg gacatccaag ggaatttctt tcagcgaatg acggtaggcg acgcggtcga
    14341 taaagggaat caaaatattc aaaccggccg ttagggcgcg atggaaacgc ccgagccttt
    14401 cgacaacgtg gacttcctgc tgtgggatga caacaaagga tttgaaaccg aaaacggcaa
    14461 cggctgccaa caagataatg aaaaattcca taattcctcc gagtgttaag gttttgcgat
    14521 gataagaagg ttgccttcct tgcggacgat tagggcgcgc gttcctggtt caagctcttc
    14581 ttgccccgta ttttgcgcct gccagtgcgt accgcgataa aaaacttcgt aacggttgcc
    14641 gcctgtgtgt cggaggattt cgacatattg tccggcatcc aaatcctgat atgaatccgt
    14701 ttcaactttt ctaacggcgg ttttggcgtg tacgaaccaa atacccagcg cggaaagcag
    14761 agcggcggtc aagacggcgg caggcgtgct gccggtcagc ccgtaagcaa tgcccgaacc
    14821 cgccaaagcc gcgctgacaa ccaaaagata aaccgttccc gtcaataatt cgatgattaa
    14881 gacggcaaca gcggcaacaa accatacagt catacatttc cccacaaagc gcgtcgtttg
    14941 acaaaataac gcaatatcag cagtatagcc gaatttgaaa ggatagggca gatatggaca
    15001 cttggcacga tgcactcggc ggcgaaaaac agcagccgta ttttcaggaa attttaaatg
    15061 cagtcaggca ggaacgtttg tcgggacaaa tcatctatcc gccggcggcg gatgtattca
    15121 acgcattccg cctgacagcg ttcgaccggg tcaaagccgt tattctcgga caagacccgt
    15181 atcacggggc agggcaggcg cacggtttgg cattttccgt caggcagggc gtccgcatac
    15241 ccccgtcttt actcaatatc tacaaagaat tggaaaccga catcgaaggt ttttccattc
    15301 ccgcgcacgg ctgtctgaca gcgtgggcgg agcagggcgt attgcttctg aacacggttt
    15361 tgacggtgcg tgcaggacag gcgcattcgc acgccctttt aggctgggaa cgctttaccg
    15421 ataccgtcat caggcagctt gcgacacacc gcaagcacct tgtcttcatg ttgtggggtg
    15481 ggtatgcaca acaaaaaggg aggctgatag acagtcaaaa ccatttgata ttgaccgcac
    15541 cgcatccgtc tcctctgtcg gcatatcgcg gttttttcgg ctgccgccat ttttcacagg
    15601 caaacagcta tttgagccgg cacggtatcg atccgataaa ctggaagctg tgaatgccga
    15661 tatagccgtt gccgccggcg tgttaaaatc gcgtttgatt tgtaatttcc atttattagg
    15721 caaaacctta tggcaatcaa aaaaaaatca gctttatgca tcactttggg cgggctgcga
    15781 cgagttgcgc ggcggtatgg atgcgagcct ttataaagaa ctatgtgctt acgctattgt
    15841 ttttaaaata tgtttctgat aagcataagt acggcggcgg catgattgag ctgcacgccg
    15901 atacgacttt tgacgacatc gtcaaactca aaaacaccgc cgacatcggc gaccgcctga
    15961 ataagatcat cgcccaaatt gccgaagcca acgacttaaa aggcgtgatc gacgttgccg
    16021 acttcaacga cgaagacaaa ctgggtaaag gtaaggagat gatcgaccgt ttgagcaggc
    16081 ttgtcggcat ttttgaaaag ctcaaccttt cttccaacca agccgaagac gacgatttgt
    16141 taggtgatgc ctacgaatac ctgatgcgcc attttgcgac cgagtcaggc aaatccaaag
    16201 ggcagtttta cacgcctgcc gaagtctcgc gcattatggc gaagattatc ggaatcagcg
    16261 cagattgccc gtccagcacc agcgtttatg acccgacctg cggctcgggt tcgctgttgc
    16321 tcaaagccgc cgcccaagcc ggcagccaaa tcagccttta cggtcaggaa aaagatgtgg
    16381 caaccgcgtc ccttgcccgt atgaatatga ttttgcacaa caacgaaacc gccgaaatca
    16441 acaccgggaa cactttgtcc gattcgtctt tccgtgatga aaacgacggg cttaagacct
    16501 tcgattttgc cgttgccaat tcgccttatc ccgcccgaaa aaaacggcga ttacgccttt
    16561 ttgctgcatc tgctcaaaag cctgaaacca agcggcaaag gtgcgattat tcttccgcac
    16621 ggtgtgctgt ttcgcggcaa tgccgaagcg cgtattcgca cggaattgct taaccttgac
    16681 cttattaaag gcattatcgg gctgcctgcc aacctgtttt acggcacggg cattcctgcc
    16741 tgcatcatcg tcatcgacaa agaacacgcc caaaccgccc aatttgccga agagggaaca
    16801 aaccaagtta tcagtggcgg cattaaagac ggcaacaaaa accgtctgcg tgagcaagac
    16861 attcacaaaa tcatcgacac tttcacaaac ctcgttacag ccgtatggtg catttaagcg
    16921 aaatcgcagc acaagattac aaccttaatc tgcctcgcta tatcgacagc ggagaagttg
    16981 aagacctgca aaatctcgcc gcctatcttt atggcggcat acctgcgcac gatatggacg
    17041 cattggaagc ctattggcaa gttttaggcc gtatgaaaaa cgagttgttt gccgaacacg
    17101 atggccgctt taccactata caacggaatc gattgcaaat ctttcccact ctcaacagct
    17161 taaaatcctg cgggattggt gtggaattta gggctaatct agtacagccc caaatttaat
    17221 ccactataaa atcgaaagca gccaaatcaa agcccatata ttggcgcacc ccgattacgc
    17281 cgccttcaaa gccggacacc tggcaaagtt tgccgcgtgg cacactcaaa acgaccttgc
    17341 cgccatccaa ccgggcaggc ttatccggaa atggagcgaa agcctgctgg acgcgttcaa
    17401 acccggcagc ctgattgaag aatacgattt ctaccaaatc ctgacggact actgggcgga
    17461 aaccctgcaa gacgatgttt atctcatcgc ccaagatggc tggaaggcgg ttaaaaacct
    17521 ggccgaaatc accaaagaaa gcgatgaaga cgcgaacctg accgtcgtct ttgaggaaac
    17581 cgaaaccggc aaaaaaggca aagccaaaac caagcgcatc agcaaaaaat accgcagcga
    17641 agtcatcgcc cccgagctgg ttgcccgccg ctacttttca gacggcatcg ccaagctgga
    17701 agaaaaacaa agcgagctgg aacgcctaag ccaagaattg gaaaaccaca tagaagaaca
    17761 cggcggcgaa gagggtgcgc tgaacgacgt attggatgca aaaggcaaac tttccgccaa
    17821 acttctgaaa accgcattgg aagaaagcgg catagaagaa ggcgaacggg ctgttttaca
    17881 aaccacccaa acactgatga cgcaggaaaa agccgcgaaa gacgcagtca aaacccaaat
    17941 cgaagccctg aaccttgccg tattcaaaca attcggccga ctttccgaag ccgaaatcaa
    18001 gcagcttgcc gttcaagaca aatggcttgc cgatttacaa agccgaatcg aaaatcgctt
    18061 ggaaaacagt attcagcagc ttatcagccg cttgaacacg ctggaagacc gctaccgcag
    18121 cccgatggcc gagcttgccc gagaagtgga aaagtggcaa agcaaagtca atgcccacct
    18181 tgaaaatatg ggttttggag gctgaaatgg cggcacagac aggctataag gcgagcgggt
    18241 tttgagacct ttgcaaaatt ccccaaaatc ccctaaattc ccaccaagac atttagggga
    18301 tcgcggttcg ggtgtccgca ccgcttaata cgtcgtcgtc cacgaactga cccatttgct
    18361 cgaacgccat cgcaacgccc gttttatggc gcatatggac aactttctcc caaactggca
    18421 aagcatcaaa caacagctta atgccttgga gttatttgca caaatatata atttaacata
    18481 atatatatta tgcgaactat cggaaacagt tgtacgtgtc cctgtggtct ttccaagtag
    18541 gaaaattaaa gtatggacaa tgcggctgaa tgtatagccc ggagcatccg cgtatccgaa
    18601 ggtactgaac gatatgccct gcatcccttt cgatgcttcc atccagccgg tattgggaaa
    18661 tacgttgacc ttcaatataa tatacaggca gccgacacac aggatatgcc gctgcttttt
    18721 catcatttct tctgtcaaat ccttggaaca gttgatttga aaacacggct ttacatacgt
    18781 cccaattctc tttgcagtgc ttggatattt tgctgcctgt ccaatacatt gctttgcaat
    18841 gcgttgattt cttgatggtt gatgttgccg ccttttgcca gacgtgcttg tgataacatt
    18901 ttttgggctt caaccaatgc tttgcgttcg ttgctcaatt ctgtttcgag aattgagcgt
    18961 ctgctgttgt ttgagggtgc ttgttgcggc ggcggcgtat tggattttgc cggcttggat
    19021 actgttttga ccggggcttt atatttgaca acctgtccgc cgtttgacgg tgatgatacc
    19081 ggttcgggcg tttggggcgg gatatagcgt tcgctgctgt agttgccgat tgggggcaaa
    19141 tcggttgagt ggcagctttt ggacggcttg gtggtgtaaa cggtttctcc gttgattgtg
    19201 caggtgtaga ttttggccgc attcgcaccc aatgggcttg aaatcaggga aaagttgatt
    19261 aggattaagg ggagttttga tttcataatg tgcttgattc tcggataatt atttgatttt
    19321 ttggtatttt ttataatgct ttcttggcgt tttacgggct tttcttttcg gttgtttgct
    19381 tttgattttc tttcggggct ttggcagcct gcttgttctt tttcccggca ggttttttgt
    19441 ttttcttttt actttctatg tgtattttgg cttcttaact gagtttttta attttcaggc
    19501 ggtatccgcc tccctgatgg ctgctgattt taggtaaatc cgcatcggcg cacgatcctg
    19561 ctggggctga tgtatatacg cttttgccat ttgagttgca atggtatacg gaggcttgcg
    19621 ccgccgcgcc ggaaagggac aggagaccca aggcggcaaa aagtctgatg tttataccgg
    19681 taaaaggcgg tgataacgcc cgaattatac cgttattggc aggcaaagat aagcaccctg
    19741 cccgcgcttc tttatcgctc ggcaaactgt ttctcgattt cagtttcaat ccgttccaat
    19801 tcttcttgac aagccagcca aacctcttcg atttgggcaa gttgtgtttt gacttttgcc
    19861 agctgggata aggtattttg caatttttct ttgtttgctt caaggtaagc gtcttcttgt
    19921 gctaaaaatg cttcacatgc cgtctgaatt tcggaaagct gcgccatttc tttttcggca
    19981 cggtctattt tctgctgtat cggcttgccg cgtcgggctt tttcctgacg gatttgcgct
    20041 tcgatgcgct tggtgtcttt gcggctttgg ctttgtgcgg atgctgcggg tgcggcggcg
    20101 gcgttttcct gtgccaaacg ccattggcgg taatcgttca aatcgccgtc gaagttcttc
    20161 agacggcctt tgtcgatcag gaggaagctg tcggtagtcg cttcaagcag gctgcggtcg
    20221 tgcgatacga tgattaaggc gccttggaaa ctttgcagag cgagcgtcag ggcgtggcgc
    20281 atatccaagt ccagatggtt ggttggttcg tcaagcagca gcaggttcgg cttttgccaa
    20341 ataatcatgg caagggcgag acgggctttt tctccgccgg aaaaaggttc ggttttctgc
    20401 aacgccatat cgccggcaaa gttgaagccg ccgaggaaat ttcggatttc ttgttcgcgt
    20461 acttcgggag aaagctgctg aatatgccaa acagggtttt ggtcggcgcg gatggtatcg
    20521 agttggtgtt gggcaaaata gccgatattg agtttttcgg aacggacgat gctgccagag
    20581 agcaaatcga ttttgcccgc caaggctttg ataaatgtag atttaccgct gccgttgaca
    20641 cccaataaac catagcgcgc gccgctttcc agcgacaggg taatgtcgtg caaaacagtt
    20701 ttgccttcgt aacccaaatc tgcgtgttcc agcttcagca aaggattggg cagatgctcg
    20761 ggattgtaaa actcaaagga aaactcgctg tccaaatgcg cgggagcgat gcgttcgagc
    20821 tttgccaaag ccttcatgcg gctttgcgcc tgaacggctt tggtggcttt ggctttgaag
    20881 cggtcgataa aggattgcag atgtttgatt tgcgcctgct gtttgacata ggcggcttgt
    20941 tgctgcgcga gacgctgcgc gcgttcgttt tggtaaaaat cgtaattgcc gccgtattgc
    21001 gtgagctttt gctgggacaa ttcgatggtt tgggtggttg ccgcattgag gaaatcgcgg
    21061 tcgtgggaaa tgatgatttg cgtgcagggt aaagaggcaa ggtggttttc cagccacaag
    21121 acggtttcca aatccaagtg gttggtcggt tcgtccaaaa gcagcaaatc ggcgcggcaa
    21181 atcagggctt gcgcaagatt caagcgcata cgccagccgc cggaaaagga tttgacgggg
    21241 cggctgtgtt cttcttgcga aaaacccagc ccgttcaaca attttgccgc gcgggccggc
    21301 gcggtataag cgtcgatttc ttccaatttg gcatgatatt ccgcctgttt cataccgtcg
    21361 ttttgcgctt ccgcctgcct caatgccgtc tgaagggtct gtaactcggc atcgccctgc
    21421 aaaacgtaat ctaaagcgga aatatccaaa tcgggcgttt cttgggaaac ggaagcgagc
    21481 cgccagtttt tcggaatcga gacatcgccg ccgtcctgag tgatttcacc cttgattaag
    21541 gcaaacaggc tcgatttgcc cgtcccgttt ttgccgatca aaccgacgcg ctgaccggga
    21601 ttgacggtag cgttggcttt gtcgagcagg actttcaaac cgcgttgcag ggtgaggttt
    21661 ttgatttcaa tcataacgga aacatcgtcg ggcgggaaaa gcccgtattt tacctgaaag
    21721 tcagtgccga tgccgtctga aacgggaaat ttacggctga agccaagccc aagccctgcg
    21781 cccttccgag tgcaggaaaa ccaatgtcct gaatgccgaa tcggtattca tacattccac
    21841 gccgattccg attcgagaaa aatccgccat gattttggga tggataaact cctgagccgc
    21901 gcccgtcccg ataatcaata tttccagata gtcaacaggt ttgatgtcgg acaacaggtt
    21961 ttccggagtc agatcggaca aggttcggca ttgcgacagg cagaccgaat ccttatgtac
    22021 aagcacgggt ttatggaaac tttgccccgc cagccggatt ccgcccgcac cgcattcata
    22081 ttccgcaaac tgtccgtcta tcggattttc ttcaaacaac atttttttac cccgttgccg
    22141 catcatctac accgaaaggg gtgcaaaatc aggcgaattc atgtaggatt ggcagatttc
    22201 atctgacccg cctgccgatt tcagacggca tttgattcaa agtgcggcac aattatatcg
    22261 gcagcggata ttttcgtctt tcaatattta catttcagtc ggcttacaag gagacacaat
    22321 gaagccagta aacatcggtc ttttaggttt gggtacggtc ggcggcggta cggctgccgt
    22381 gttgcgggac aacgcggagg aaatttcccg tcgcttgggg cgcgaaatcc gtatttctgc
    22441 cgtgtgcgat ttgagtgaag aaaaagcccg acaaacctgc ccgtccgcag cctttgtcaa
    22501 agatccgttc gaactggtcg cacgtgaaga cgtcgatgtc gtcgtcgaat tgttcggcgg
    22561 taccggcatt gccaaagatg cggtgttgaa agccattgaa aacggcaaac acatcgttac
    22621 cgccaacaaa aaactgctcg ccgaatacgg caacgaaatc ttcccgctgg cggaaaaaca
    22681 aaacgtcatc gtccaatttg aagcggcagt agcgggcggt atcccaatca tcaaagccct
    22741 gcgcgaaggt ttggcggcaa acaggattaa atccatcgcc ggcattatta acggcaccag
    22801 caacttcatc ctctccgaaa tgcgcgaaaa aggcagcgcg tttgccgatg tactgaaaga
    22861 agcgcaggca ttgggttatg ccgaagccga tccgaccttc gacatcgaag gcaacgatgc
    22921 gggccataaa atcaccatca tgagcgcact ggcattcggc acgccgatga acttttccgc
    22981 ctgctacctc gaaggcatca gcaaactcga cagccgcgac atcaaatacg ccgaagaact
    23041 tggctatcgc atcaaactgt tgggcattac ccgcaaaacc ggcaaaggca tcgagctgcg
    23101 cgtccaccct accctgattc ccgaaagccg cctcttggca aacgtcaacg gcgtgatgaa
    23161 cgccgtgcgc gtcaacgccg atatggttgg cgaaacctta tattacggcg cgggcgcggg
    23221 cgcattgccg accgcttccg ccgtggttgc cgatatcatc gacatcgccc gcctggttga
    23281 agccgatacc gcccaccgcg taccgcatct ggcgttccaa cccgcgcaag tccaagcgca
    23341 aaccatcctg cctatggacg aaattaccag cagctactac ctgcgcgtcc aagccaaaga
    23401 cgaaccgggc acgctggggc aaatcgccgc gctgttggca caagaaaacg tgtccatcga
    23461 agcactgatt caaaaaggcg tgattgatca gaccactgcc gaaatcgtga ttctgaccca
    23521 cagcacggtc gaaaaacaca tcaagtcggc aatcgcagcc atcgaagcac tggattgcgt
    23581 ggaaaaaccg attaccatga tccgcatgga aagcctgcat gactgagccg aaacacgaaa
    23641 tgctgacgaa agagcaggtt gccgcgcgca aaaaagcaaa agccaaaatc cgcaccatcc
    23701 gcatttgggc gtgggtcatt ttggcgttgc tcgctttaac cgccctgctc tcccaatgcg
    23761 cgatgtccaa accgcaggca aaacagaaaa ttgtcgagtc ttgcgtgaag aatattccgt
    23821 ttgccgaaaa atggcaaaac gatttgcggg cccgcggttt agattcaaac aatacccgcc
    23881 tcgccgtcga ctactgcaaa tgtatgtggg agcagccttt ggacagattg agcgagaaac
    23941 agattagatc cttcggcaaa ctcggcgcac aagaacagct tgacctgctc ggcggcgcaa
    24001 atgcctttga agcacgtgac aagcagtgtg ttgccgattt gaaatcagaa taatgtggac
    24061 cgataaaaaa gccgattctt taaagaatcg gcttttttca taaaaaacgg cttacagtgc
    24121 gtctttcaaa gctttgccgg cgcggaattt aggcgttttg gcggcggcaa tggtcagagg
    24181 ctcgccggtt ttggggttgc ggccttggcg ttccgcacgt tcgcccacgt agaaagtacc
    24241 gaaaccgacc aaagtaacgg tgtcgccttg tttcagggcg gtggttactg cattggtagt
    24301 ggcatccaaa gctttttgtg cggcggcttt ggaaatgtcg gcttcttgag caatcgcttc
    24361 gatcaattca gacttgttca caatcagtcc cttcctgtct taaaaaatga tgaaatgccc
    24421 gaatactcgg ggtttgtact gcttgagcaa ctttcgcttt atagcaattc tgaaattgcc
    24481 gtgtcaagca aaaaatacgg aatcacccta tttgacaggc tttcaggacg aaaccgcatt
    24541 tttacaacac atttcctgcg tttcaatgtt tggttgccct gctgcggggt tttggttttg
    24601 aagcggattc cgccgccgct tccgcaccag aaggttctgc ccaaggctca ggctggcttt
    24661 ccaaacccag agccaatacc tcgtctatcc atttgaccgg atggatggtc aggccggttt
    24721 tcacgttttc agggatttct tccaagtctt tgaggttgtc ttttggaatt aaaacgtgtt
    24781 tgatgccgcc gcgaagcgca gccaacagtt tttccttcag accgccaatc ggcaggactt
    24841 cgccgcgcag ggtaatttcg cccgtcatgg caacatcggc gcgcaccggg attttggtga
    24901 atgcagacac catcgccaaa gtcatggcaa tgcccgcact cggaccgtct ttcggcgtcg
    24961 caccttcggg aacatggaca tggatgtctt ttttctcgta aaaatcagga gccaagccca
    25021 ctgattccgc gcgggagcgg acaaccgacc acgctgcaga cacggattcc ttcatcacat
    25081 cgcccaactg gccggtgcac tgaatcacgc ccttacccgg caatgctgcg gcttcgacgg
    25141 tcagcagttc gccgccgact tctgtccacg ccagaccggt tacttgtccg atacggtttt
    25201 cgctttcggc aacgccgtaa tcgaagcggc gcacacccaa atagtcgtgc agatttttct
    25261 catttacttt aaccgcttta ggtttggctt tgctggtttt cttggtttca gacaacctct
    25321 tcttatcttc gtccaaggta atctgcatca ccaccttgcg gcagattttg gcaatctcgc
    25381 ggtcgagcga acgcacgccc gcctcgcggg tgtagtaacg gataatatcg cgcaccgcgc
    25441 tttcttcgat tgccaattcc ccttctttca cgccgttgcg cttcatttgc ttcggcacga
    25501 ggtactgcat cgcgatattg attttttcgt cttcggtgta gccggacaga cggatgattt
    25561 ccatacggtc gagcagcggg gtcgggatat tcaggctgtt tgaagtcgca ataaacatca
    25621 catcgctcaa atcgtaatcc acttcggcat aatgatcggc gaacttgttg ttttgctcgg
    25681 gatcaagcac ttcgagcaac gcgctggcgg gatcgccccg gaagtcgcta cccaatttgt
    25741 cgatttcgtc gagcaggaac aatgggtttt ttacgccggc ttttgccata ttctgcagaa
    25801 tcttaccagg catggagccg atataggtgc ggcggtgtcc ccggatttcg ctttcgtcgc
    25861 gcacgccgcc caaagccatg cggacatatt tccgccccgt tgctttggcg atggattcgc
    25921 ccaaagaggt tttgcccacg cctggagggc cgaccaggca cagaatcggg cctttgagtt
    25981 tgtccatacg tttttggacg gcgaggtatt ccaaaatccg ttctttgact ttttccaggc
    26041 cgtagtggtc ggcatccagc accagtccgg ctttggcgat gcctttgctg acgcgggatt
    26101 ttttcttcca cggcagttcg agcagggtgt cgatgtagtt gcgtacgacg gtggattcgg
    26161 cagacatcgg cggcatcatt ttgagttttt tcagttcgga caggcatttt tcttccgctt
    26221 ctttactcat acccgccttt ttgatgcctg cttccaaggc atccagttcg ccgttttcgt
    26281 cttcttcgcc caattctttg tgtatcgctt taatctgttc gttcagataa tattcgcgct
    26341 gggatttttc catttggcgt ttgacgcgtc cgcgtatgcg tttttcggcc tgcataatgt
    26401 cgagttcgga ttccagctgt gccagcagga attccatccg tttgccgatt tcggaaatct
    26461 ccaaaatctg ttggcgttgc gtcagtttca actgcaaatg cgctgcgact gtatcggtta
    26521 gccggctgtt ttcggcaatg ccgttaatgc tgccgataat ttcggcgggg atttttttat
    26581 tgagtttggc gtattgttca aactgcgcca acagggtgcg gcgcacggct tcgaggtcgg
    26641 tattgccgcc cgtgtcttct tccacgaccg cctctatatg ggaaacgaac agcccgcccg
    26701 tgtcttcaat agtcagaaca cgtccgcgat acagcccttc gaccaatact tttaccgtgc
    26761 cgtcgggtag tttcaacact tgcaggactt gtgcgaccgt accggtctga tacaggtcgg
    26821 cggcaaccgg ttcttctacc gccgcatcgg tttgcgccaa caggaaaacc ggctcctcgc
    26881 gggtaatggc gttttccagt gcggcgatgg atttcggcct gccgacaaac agcggcagaa
    26941 ccatatgcgg gtaaacgacg acatcccgca aaggaagggt tgccaaggcg gcatattcct
    27001 caaaatgctt ttctttttgt gtcataggta ctctcttgtg tctgacagat tgccgatttt
    27061 cgcgtacatt ggggttgaag gtattatttc aagcatatgt ggtttattta tggagtttga
    27121 tgcgatgccg tctgaaacat tccggcttca gacggcatgg gcttggaaag acaaggcggg
    27181 aacaaaaaac tgttctgtgt tgccgctcct tgctgtacca tccgtatggt ttgcggttct
    27241 gccgccctat tttcaaaaca tgacgcaggt attccatgtc ttcttttatt tttcccgata
    27301 acgggttcga atggcgcaac gaaagtctgc aaaagccgcc caaaggttgg cattatgtcc
    27361 gcgaaagtgg tgcaaacggc attttgaagg ctgcctatca aaatattgca actgtctggc
    27421 agggcgattt ccacaatgcc aaacaggtgc tttccgcaat gaagaagaag gtccgcaaac
    27481 ctgccgccgt ccgttccgat gcggatattg ccgccctttt ccacgcccac cgtatgaagc
    27541 aggcgcagca gagccgtatt ctgaatatgc ttgccgttga aatccgcccc ggttttgtgt
    27601 tggacaacaa acgcgcgccc gatatacgcg ccgccctgct cgacgtgtac ggagaggcgg
    27661 acggcaaacc gtttttcctg ccgctcaatc tgctgctggg gtttatgggt gcgcacgagt
    27721 ggcataagaa aggggttgcc gttccgcagc tgggcagcag catacacgtt cctttcggcg
    27781 tattctcgcc gttgcgcggc gaatacctcg acctgctcgc ccatgcgccg tcaacgggtt
    27841 ttcagacggc attcgatatc gggacgggct cgggcgtgct tgccgccatt ttggcgaaac
    27901 agggcattcc ttccgtcatc ggcacggata ccaatccgaa agccgtcgcc tgcgcccgtg
    27961 ccaatattgc ccgtttgggc tttgaaaaac aggttgagat acgggaaacc gatctgtttc
    28021 ccgaagggtt tgccgacctg attgtctgca atccgccctg gcttcctgcc aagccaactt
    28081 ccgccgtcga atccgcgtta tacgaccccg aatctgcgat gctggctgcg tttttgcggg
    28141 atgcgccgaa acatctgaat cccgatggag aaatccgtct gattatttcc gaccttgccg
    28201 aacatctgca cctgcgtccg tccgattttc tggataaggc atttgctcag gcagatttgc
    28261 gcgttgcgga tgttttgaaa accaaaccgg ttcacaaaaa agctgccgac ccggacgatc
    28321 cgctggcttt tgcccgaaac agggaaacta ctttcctata ccgtttgaaa aaggcataag
    28381 gggctgcggt gcgcttccgg cggcaggcat cggaacgccc gcgccgccgg cacggcatca
    28441 ttcgggcgga ttattcttgt gaaaataccc gctcgagcat actgcccaat gccgtctgac
    28501 gcgttttgac agtggcggca gcttgccgga aggtttcttc tccgccgaag aatacgaact
    28561 tctccctcgc gcgggtaatg gcggtatata acagctcctt actcaatccg gacaatgcat
    28621 cgtccccttc gtccgaaggt gcggcggaag gcggcagcag ccagacttcc cgatattccg
    28681 aaccttggct tttgtggacg gtcatggcga atgcgggttc gaaatcgggc aggcagctta
    28741 ccgctacctt tttaaatccg tccgcatcgg caaaataggc ggcaaggctg ccctgccgtc
    28801 cgacatcttc cataatcaat ccgatgtcgc cgttgaacag ttcaagcgcg tagtcgttct
    28861 gtctgatcat aatcggttct ccggcgaaat aggcctgatg ttccggtatg ttcattttgc
    28921 ggcgtacatg gcggcaatag gcttcgttga agtcttccgc atcctgccgc caagctgcca
    28981 ggaccacgat atccgagatg cctgcgtatg cggcttcgat attgccgtct tttaccgcct
    29041 gccaataggc tttgtgcgcc cggtacaacc tttcgactcg agcgttcgga ctgcattccg
    29101 aatgttccag ttcgtccgga aactggtcaa acaatgccca cgccccctca tcgcccgata
    29161 cggcggcacg ggcaaggcag ccgatgccgc tgttgtcgcc gaagcggtgg ctgaacgaca
    29221 gatgggcggt gttttgcgcc aacacgggcg gatttgcgct gacgctgaaa ccgtgttccg
    29281 gaaggaagcc ggccagcctt tggtgcgttt ctccgtccaa aacggttttt tgcgacaaaa
    29341 cggacagcac cgccccgatt ccgacggacg ggagctggtt ttcatccccc agcagaatca
    29401 cgcgcgcgcc ggttttgacc gctttcaaaa gttgcagcat caatgcggta tccaacatgg
    29461 aggcttcatc gacaatcagc acatcgaacg gcagcggacg gatatggtcg aacgccgcct
    29521 gcattttggg cgggcgcagc ttcagcaatc ggtggacggt ttgcccttcc agtttgagca
    29581 aatggcggcg gacggcctcc ggcgcgtcaa aaccgttgat tgcacggtgc agcgcgcgcg
    29641 ccatatgtgc tgccgctttg cccgtcggtg cggcaagcgc gatatgggga agattttcgt
    29701 cttcaccgca aatcagcgcc agcagtttgg caaccgttgt cgttttgccc gttcccggcc
    29761 cgccggtaat caccataaaa gactgtaaca gtgccaaggc ggcggcatcg cgctgtcctt
    29821 cgctgcccgc gccttgaaac cattttgcga ggttttgccg cgcacctgtc gcgtcggggg
    29881 cggatgtgcc ggctgccgcc aagcgtttta tctcggcagc caaatcgtat tccaactgcc
    29941 acatcctgcc caaaaacagc cttctgcctt ccaaaatcaa aggcgcggcg gatgttccga
    30001 ccacgggtgc gagtgccgac agcgcatcag cctcgccacc gctcaaacgg ataaacgaat
    30061 gaccgttctg caatgcctga aacaggcgtt cggtacagtt tgcaagcact tcgtcgccag
    30121 aacccgcata gtgttccaaa aaacggattg ccgcccttgc cgccgcttgg gcaaattcat
    30181 ctgtctgccg ttccatcgta ttccttgtcg aaatgccgtc tgaaggcgtg gggcttcaga
    30241 cggcgcggtg ttgtttcggc tgtttaggcg tttgcgccct gtttggggtg caggctgccg
    30301 tctttcatga ccatcacgcg cccgaagcgg ccggcgagtt cgtcgtcgtg cgttacgacc
    30361 accagccccg ttcccaattc tgttttcagt tccagcatca tatccaaaac attccttgcg
    30421 tttgctcggt cgagattgcc ggtcggttcg tcggcaagca ggcatttggg ttgcgtaacc
    30481 aaggcgcgcg caatggcggc acgctgccgc tcaccgcctg aaagttcgcc cgcgcggtgc
    30541 gtcgaacggt gtttcagtcc gaccttgtcg agcatcgaca ttgccgtttc tgccgcctct
    30601 tcacggcttt ttttgccgat cagaagcggc atcatcacgt tttccagtgc cgaaaattca
    30661 ggcagaagat ggtggaactg gtacacgaaa ccgagatggc ggttacgtaa atcgcccaaa
    30721 cgccgctggt ttaaggtacg caaatcctcg cccatcagca gcaccctgcc ttcagacggc
    30781 atatccagcc cgcctagaat atgcagcagc gtcgattttc cgctgcccga agaaccgatg
    30841 atgccagtgc tttcccccgc gcggatttcc aaatccaagc cgtgcagcac ccgaacgtcc
    30901 aaaccgccgt cccgatagcg tttgcccacg ccttcgcatt tcaaaatcaa ctcactcata
    30961 acgcaaagcc tccgccggtt gggtttttga cgcgcgccgg ctcgggtaga gcgtcgccac
    31021 gaaagacagt cccaaagaaa tgcaggcaat cagggcaacg tcgcccatat cgacatcgct
    31081 gggcaggtag tcgataaaat aaacctgcga attgatgagg tggacaccga gcaggttttc
    31141 aaaaaacgcc acgaccctgc cgacgttcca acccaaaagc acgccgcaga ccacacccgc
    31201 cagcgtgccg aaaaagcctg aaaacgcgcc ctgcaccata aaaatcttca tcacgccgcc
    31261 aggggaaaga cccaaagtcc gtaaaatcgc aatgtccgcc tgcttttccg taaccgccat
    31321 caccaaggaa gagacaaggt tgaacgccgc cacggcgata atcagcgtca ggatgatgaa
    31381 catcatccgt ttttccaact cgaccgcctc aaaatagctt cgattgctga acgtccaatc
    31441 gcgcacccaa accgtatccc tttgcgcctc cggaatcagt gttgccgtca aggcgggggc
    31501 gttttgcggg tcggcgagtt tcagccgcag ccccgcaact tccttatcca agcggtacag
    31561 tacgcgcgcg tcttggatat gcgtcatcgc caatgagttg tccacttcgt aaacgcccgt
    31621 cttaaccaga ccgaccacgg taaactgctt caggcgcggc acgactccgg caggggtaac
    31681 gttgccctcc ggcgtgatga cggtaacttt attgccgact tccgccccca aagcctccgc
    31741 caagccgaca ccgaggataa tgtcaaactc gcccggaatc aggtcttcaa atttgcctgc
    31801 cggcattttg tcgccgtatt ccaccacttt gcgctcttca gacggcaaaa tgccgcgcat
    31861 ctgcacgccc ctgatttcgc ccgcattggc cagcaatgcc tgattggaaa catagggcgc
    31921 ggcagccaaa atacctttgc ggttttcggt aaaccgaagc aggttgcgcc aatccgtatc
    31981 cgtattgtcg atatagccga tttcggcgtg cggcgcgaca ttcaggagct gcccgcgtat
    32041 ttctttctga aagccgttca taaccgacaa gacgacaatc agcgcggtta cgcccaaggc
    32101 gattccggca atcgaaacca tcgtgataaa cgacataaag ccgttgcgct ttttcgccct
    32161 gagatacctc aagcctatcc aagcctctag agaaaacata acgctacctt aaaaatgtct
    32221 gcaaacgtgc cgccccggac ggcggtttgg gggcggcggc aaaagtttat tgtaccgtaa
    32281 aacccaggca gcgtccgaac gcccgagtgc gggggacggg gcggcagagc gggcggaaaa
    32341 cttgcacaac gcgtcaaact gccctatcct ttccttcaga aaaaccgttt cttgaggaaa
    32401 acaatgaata tccgaactgc ttttgctttg tgcgccatcg ccttatccgc cgctgcggct
    32461 gcctacgcca aagaaatcaa aatcgatgcc aacaacacgc cttattccga agccgacgcg
    32521 caaaagctgg cggcaacggc agtcggtatg ggtgttaagg aacctatcag cctgaacggc
    32581 ggcagcgaca gcattaccgt gtccggcagc agcgcgacgc agtgcgtgtt caaagtcggc
    32641 aacggaggcg cattgcagat tcaagggcta aactgcaagt aaaccgcccg gaaaaatgcc
    32701 gtctgaaggc ttcagacggc attttgcatt ggcggcgtta tgccccgcct tctttaatca
    32761 ggcggcgttc gtacaccgcc tgcgccagcg ttcccgcatc gacatattcc aattcgccgc
    32821 ccaaggggat gccctgcgac agcctgctga ctttgtaagg caggttttta aaaaactcgg
    32881 acaggacata cgccgtcgca ttgccttctg cggtaaaagc ggttgcaata atgatttctt
    32941 cgacttcccc gccgcccagc cgttgcgcca gcctgtccaa tgcgatggcg gatacgtcca
    33001 ttcccagtgc cgtattgatt tgccccatca ggacgaaata cagcccgtcg tggcagtttg
    33061 ccgcttccat attcgacacg tcggcaggca tatgcaccac catcagccgc cgcccgtcgc
    33121 gtgtttcatc ggcacaaata tcgcacaatc cgccttcgca aaacgtgttg cacatcgcgc
    33181 aatgatcgac ctgcttcaat gccgtctgca aggcatccac cagtttttca gcctctttgc
    33241 gcttgtgttg gagcaaatga tacgctatcc gctgtgccga tttcggcccg acgttgggta
    33301 aaaccttcag cgcgtcgatc aatccttgga aggcatcttg ttttttgtgg ctcatcatat
    33361 tccgccgtat gggaaaacgg ccggaatatt ccgaccgtta ttttgtcaac aaaagtgtca
    33421 attactgacc gtcgccgttg tcgaccgatt gcgctccttt ggtctgtttg attttgccgt
    33481 tgaaataacg tatcaacaag tcgaaagtat tggcagactg ctgttgcgcc aaagcctgtt
    33541 ttgcaagcgg aagctgtgcg gcgatatcat ccggcggggt tacagcctgt acttcgacaa
    33601 tcacgggtgc cggcagaccg atcagcctga cgtaggcggg tttgccgttt gccggttttg
    33661 ctttcagcag ttccgcataa gcctcgggcg gcatggactg ccttgcctgc tgtgcgccca
    33721 aaacggacac ttccgaccat ttcacgtcaa cagccttgcc gccgttcagt tgggtaagca
    33781 cgtcttttgc cttgttttcg gcaagtttgg cggcttcggt acggatataa gcctgacgta
    33841 ccgcgtcttt ggcttcggca aacggcaggg ttttctcttc gcggacttct ttggcgcgga
    33901 cgacccacgc ggtttcgctg ttgatggtca gcacttcgga attgtgtttt ttcttcaata
    33961 cgtcgtcgct gaatacggca ttgatcaggt tttcgggcat accggacatt tgcgcatcct
    34021 gcctgctcag ccaagtttct tgggtttcga ctttcaaacc gctgtttttg gcggcttcgg
    34081 caagcgagga aggatggttg aacgcgtcat cgcccagctt ttcttttgcc ttattgaagt
    34141 cggcaaccgc ctttttcatt ttcaattcgt tttcgacggc ggctttttcc tgctcgaaag
    34201 aaggtttggc ttcatttgtc ggcaaacgcg ccacgcgctc ttcaaacgca tttttcactt
    34261 ccgtttcact gacggtctgt ttgtctgcaa aatccttcag attcaaggcg acatattcta
    34321 atttgaccgc ctgcggcagc agatagtctt ttttgttcgc attataaaat ttctgcaaat
    34381 cggcttcaga cactttgact tgggcgatga actcgtcggg gttgaaagtg tgcgaacgga
    34441 tggtgcggtt gacctgcgtc agcctgatca gctgttccgc ctgcgcgtcg ccgaccaata
    34501 cgccgttttg gacgaggttt accaaattct gcaaggcaaa ctgatcgcgg atttcttcga
    34561 caaactggtc ttcagacata tgacgttggg aaaggtagcg gtttaaaagc gcgtggtcga
    34621 atttgccgtt tgcgtcgtgg aaattgggat cgtccacgat aatctgcttg atttgttcgg
    34681 aagaaaccga aatgcccatc agcttcgcgc cctgtttcag gtaggcgcgt tgcagcaggg
    34741 attggaacac cgcgtcgcgc gaagggccgc cgccgtccgc ctgttcgttc tgtatggcgt
    34801 tgttgatgga gtggtcgctg attttttcgt cgcccacttg gacgatgtag tcggcacccg
    34861 gatgggatac cgtgctgacc ccgaagccga cgaaggttaa tgcaatcagg cccaaaagga
    34921 cttgggcggg cgttctgtat ttttcgatgg aatggaacat attttaaatc gggatataga
    34981 atgggaacgg gaaattcaag tcgggtattg taacggtttt tatccctgtc tgcacggggc
    35041 ttgccggttg aagatgccgt cgtaggtttc ttcgctgaag ccggcgtaaa ccttgccgcc
    35101 gcactccaat acgggacgct tgatcaggct cggcatttcg gacatcagtt tgacggcctc
    35161 cgctgtcgag gacagggctt tttgctgtgt ttcggcatcg agtttgcgcc agcttgtccc
    35221 gcgtttgttg agcagggttt ccaaaggcac ttgttccagc cacgagcaga tttccgcttc
    35281 agacggcatc tgttttttga aatcccgaaa ctcaaactcc aagccgtatc cggcaagccg
    35341 gtttttggct tttttgaccg tatcgcaatt tgggatgccg tgaaggacta tcatttggaa
    35401 accttttgtc tgaaataata aaacggatat tttactataa gtgtctgaaa atttgcccgt
    35461 ctgtttcaga cggcggggcg gttatgttac aatccgaaaa ttcaacaaat ttaatctctt
    35521 gttcaatata aggttttacc cataatgatt tctaccaacg gcattaccat gcagttcggc
    35581 gcgaagccgc tgtttgaaaa cgtatccgtc aaattcggcg aaggcaaccg ctacggcttg
    35641 atcggcgcga acggctcggg caaatccacc ttcatgaaaa tcctcggcgg cgatttggaa
    35701 cagacggccg gtgaagttgc gattgaaaac ggcgtgcgtt tgggtaaatt gcgccaagac
    35761 cagtttgcct acgaagacat gcgcgtgctg gacgtggtga tgatgggcca taccgaaatg
    35821 tgggcggcga tgaccgaacg cgacgcgatt tacgccaacc tcgaagccac cgaagacgac
    35881 tacatgaaag ccgccgaact ggaagccaag ttcgccgaat acgacggcta caccgccgaa
    35941 gcgcgcgccg ccgaactgtt gagcggcgtg ggcatttccg aagatttgca caatgcgacc
    36001 atggcagaag tcgccccggg cttcaaactg cgcgtattgc tggcgcaagc cctgttctcc
    36061 aaaccggatg tattgctctt ggacgaaccg accaacaact tggacatcaa taccatccgc
    36121 tggttggaag gcgtgttgaa ccaatacgac tccacgatga ttatcatcag ccacgaccgc
    36181 cactttttga acgaagtctg cactcacatg gcggatttgg actacaacac catcaccatc
    36241 tatccgggca actacgacga ctacatgctc gcctccgccc aatcgcgcga acgcgccctg
    36301 aaagacaatg ccaaagccaa agagaaactg caagagctgc aagagttcgt cgcccgcttc
    36361 tctgccaaca aatccaaagc ccgtcaggca accagccgtc tgaaacaggc cgacaaaatc
    36421 aaatcggaga tggtcgaagt caaaccttcc acccgtcaaa acccgtatat ccgttttgaa
    36481 gccgatgaaa aagccaagct gcaccgtcag gctgtggaag ttgaaaaact ggcgaaacgc
    36541 tttgaaaccc agttgtttaa aaacctgaac ttcatccttg aagcgggaca acgcctcgcc
    36601 atcatcggcc cgaacggcgc gggcaaatcc accctgctga aactcttggc cggcgcgtac
    36661 aaccccgaat attcagacgg cctgttaccg gacgaaggca ccatcaaatg ggcggaaaaa
    36721 gccagtgtcg gctactatcc gcaagaccat gaaaacgact tcgacgtcga tatggacctg
    36781 agcgaatgga tgcgccaatg ggggcaggaa ggcgacgacg aacaagtcat ccgcggcact
    36841 ttggggcgtt tgctcttcgg cagtaacgat gtcgtgaaaa aagtgaaggt tctctccggt
    36901 ggtgaaaaag gccgtatgct ttacggcaaa ctgttgctgt tgaaacccaa tgtcttagtc
    36961 atggacgaac cgaccaacca tatggacatg gaaagcatcg aatccttgaa catggcactg
    37021 gaaaaataca acggcacgct gatttttgtc tcccacgacc gtcagttcgt ttcctccttg
    37081 gcaacccaaa tcatcgaact ggacggcaaa ggcggatatg aacactactt gggcgattac
    37141 gaaagttact tggagaaaaa aggcgtagca taaccgccgg ttggaacaat gccgtctgaa
    37201 gccgcttcag acggcattgt tgataacttt aaaataggaa gcatatgcag acttacctcg
    37261 tcggcggtgc cgtccgcgat tatcttttgg gcttgcccgt caaagaccgc gattgggtgg
    37321 tcgtcggcgc agacgcacaa accatgctgg cgcaaggctt ccagcctgtc ggcaaagatt
    37381 ttcccgtgtt tctccatccc gaaacgcacg aagaatacgc cctcgcccgc accgagcgca
    37441 aaaccgccaa aggttacgct ggcttcagtt tccacgccga caaagacgtt acgctggagc
    37501 aggacttgat gcgccgcgac ctgaccatca acgcgatggc gcaagatgcg gacggcaaga
    37561 ttatcgaccc tttcggcgga caacgggatt tggcggcagg cattttgcgc cacgtttccc
    37621 cggcctttgc cgaagacccc gtccgcatcc tgcgtactgc ccgctttgcc gcgcgctacg
    37681 gatttgaaat cgccgaagaa accatgaagc tgatgcggca gatggtggca aacggcgaag
    37741 cggacgcatt ggttgccgaa cgcgtctggc aggaattggc gaaaggtttg atggaaaaaa
    37801 atccgcgcaa aatgattgaa gtgttgcgcg aatgcggcgc actcaaagtc ttgctgcccg
    37861 aagtcgatgc cctcttcggc gtgccgcaac gcgccgacta ccatcccgaa atcgacagcg
    37921 gcatccatac cctgatgacg ctgcaacgcg ccgccgatat gggcttgagc ctgcccgaac
    37981 gctatgccgc cctgctgcac gacttgggca aagccaaaac accgtccgac atcctgccgc
    38041 gccaccacgg acacgacctc gccggtgtcg aacccatgcg cgaagtcaat cagcggctgc
    38101 gcgcgccgaa acattgcgcc gagcttgccg aattggtttg ccgttggcac attattttcc
    38161 accaagtcgg acagcttaaa agccaaacca ttctgaacgt tttgaaaaaa accgacgctt
    38221 tcagacgacc cgaacgcttt cagacggcat tgaacgtctg cattgccgac acgcaaggcc
    38281 gtctgaaccg cgaacacacg ccctacccgc aacgcgcgca ctggctcgcc ttactcgaag
    38341 ccgccaatca ggcggattcg ggcaaaatcg ccgccgaatg ccgcgcgcag ggaaaagcgc
    38401 accttatcgc cgaacaaatc gaccgggcgc ggctggcaca aatcgcccca ttgcaaaaag
    38461 cgtttcgagc ggcgcaagac aaaacagaaa aacattaaaa cgtccaatgc agcca
//
LOCUS       DAWKJW010000005        33688 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.005, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000005 DAWKJW010000000
VERSION     DAWKJW010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 33688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33688
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.005"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(1068..1736)
                     /locus_tag="WJJ54_000195"
     CDS             complement(1068..1736)
                     /locus_tag="WJJ54_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ7341117.1"
                     /translation="MKNLAIFDLDNTLINTDSDHAWPQYLIKKGLVDAAETEAQNEKF
                     YRDYQNGCLDIDAFLKFHLAPLARYSKEELAEFHREFMAEYIIPHISPMQRMLVQSHQ
                     MAGDETLVISSTNEFIITPVCRLFGITNIIGTQLESGSDGRYTGNYIGTPSLKEGKIT
                     RLNQWLAERGETLESYGKTYFYSDSKNDLPLLRLVDEPVAVNPDAELEKEAKEKGWPV
                     LNFK"
     gene            complement(1733..2401)
                     /gene="hda"
                     /locus_tag="WJJ54_000196"
     CDS             complement(1733..2401)
                     /gene="hda"
                     /locus_tag="WJJ54_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HEZ7341118.1"
                     /translation="MNQLIFDFAAHDYPSFDKFLGTENAELVYVLRHKHGQFIYVWGE
                     EGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQAL
                     LFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALA
                     SMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQ
                     QETQ"
     gene            complement(2506..4177)
                     /locus_tag="WJJ54_000197"
                     /pseudo
     CDS             complement(2506..4177)
                     /locus_tag="WJJ54_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707572.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
     gene            complement(4466..5108)
                     /locus_tag="WJJ54_000198"
                     /pseudo
     CDS             complement(4466..5108)
                     /locus_tag="WJJ54_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227340.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF799 domain-containing protein"
     gene            complement(5105..5473)
                     /locus_tag="WJJ54_000199"
     CDS             complement(5105..5473)
                     /locus_tag="WJJ54_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4810 domain-containing protein"
                     /protein_id="HEZ7341119.1"
                     /translation="MNPKTLSRLSLCAAVLALTACGDNGQKSLYYYGGYPDTVYEGLK
                     NDDTSLGKQTEKMEKYFVEAGNKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRL
                     FPESGVFMDFLMKTGKGGKR"
     gene            complement(5483..6154)
                     /locus_tag="WJJ54_000200"
     CDS             complement(5483..6154)
                     /locus_tag="WJJ54_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HEZ7341120.1"
                     /translation="MKTVSTAVVLAAAAVSLTGCATESSRSLEVEKVASYNTQYHGVR
                     TPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTILVTHLQQTNRFNVLNRTNLNALKQE
                     SGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFGILGRGKSQIAYAKVALNIVNVN
                     TSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKVLDLAIREAVNSLVQAVDNGA
                     WQPNR"
     gene            complement(6319..7038)
                     /locus_tag="WJJ54_000201"
     CDS             complement(6319..7038)
                     /locus_tag="WJJ54_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ7341121.1"
                     /translation="MATLTDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE
                     KVYDAIVEAGYPEPFAICFDLISAEEKEFNQFAATIAEATQGKLDGIVHCAGYFYALS
                     PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF
                     GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVL
                     PAFVWWASTESKGRSGEIVYL"
     gene            complement(7122..8435)
                     /locus_tag="WJJ54_000202"
     CDS             complement(7122..8435)
                     /locus_tag="WJJ54_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEZ7341122.1"
                     /translation="MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGG
                     RARTLAGNTDGFGFLDNGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQ
                     FRALPLPAPLHILGGVLLARRAPTAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRN
                     VPRAAVMQFWQPLVWGALNTPLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIV
                     AEPALAELQRLGADIRLETRVCRLNPLPDGKVLVNGEAFDAAVPATAPYHAAALLPEG
                     TPEHVQTAYQNLRYHAITTVYLRYAEPVRLPAPLTGLADGTVQWLLCRGRLGLPENEV
                     SAVISVSDRVGAFANRAWADKAHADLKRILPHLGEPEAVRVITEKRATTAADAPPPDL
                     SWLHRHRIFPAGDYLHPYYPATLEAAVQSGFASAEACLQSLNDAV"
     gene            complement(8514..9386)
                     /gene="hpnD"
                     /locus_tag="WJJ54_000203"
     CDS             complement(8514..9386)
                     /gene="hpnD"
                     /locus_tag="WJJ54_000203"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HEZ7341123.1"
                     /translation="MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELD
                     DVVDECSNPDVAQATLNWWRGDLDKVFGGAMPEHPVNQALRQVKETFKLPKYELEALI
                     DGMQMDLVRARYGSFEELKLYCRRVAGVVGCLIARILGFSDGKTLEYADKMGLALQLT
                     NIIRDVGEDARRGRIYLPMEEMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYRE
                     AVSLLPAADKKAQKVGLVMAAVYYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTW
                     LFGFKPRPGTPERA"
     gene            9557..11419
                     /gene="hscA"
                     /locus_tag="WJJ54_000204"
     CDS             9557..11419
                     /gene="hscA"
                     /locus_tag="WJJ54_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HEZ7341124.1"
                     /translation="MALLQISEPGMSAAPHRHRLAAGIDLGTTNSLVATVRSGSAACL
                     PDAEGRVTLPSVVRYLENGGIEVGKTALSAQKTDPLNTVSSAKRLIGRTLADLHQNTH
                     YLPYRFGDNQRVIELHTRQGVKTPVEVSAEILKTLKSRAEETLGGDLVGVVITVPAYF
                     DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVL
                     QLTKGLFEVKATGGNSALGGDDFDHRLFCHLLEQNELSKLNEQDSRLLLSLVRSAKEK
                     LTAQTEAVIETTLSDGHKVHTVITRQEFHNLTQNLVQKTIEPVKQALKDAGVGKADVK
                     GVIMVGGSTRMLHVQQAVATFFGQTPLNNLNPDEVVALGAAIQANVLAGNKADGEWLL
                     LDVTPLSLGLETYGGLAEKIIPRNSTIPTSRAQDFTTFKDGQTAMTIHVVQGERELVS
                     DCRSLAKFTLRGIPPMAAGAARIRVTFQVDADGLLSVSAQEQSTGVQAQIEVKPSYGL
                     DDSTITQMLKDSMSNAAEDMAARARAEAVVEAESLTDAVNAALELDGDLLEAEELQQI
                     QQDIADLQGRLKDGKAEDIRAAVAKLGSITDNFAAKRMNRNIQRALAGQSVDNI"
     gene            11495..12151
                     /locus_tag="WJJ54_000205"
     CDS             11495..12151
                     /locus_tag="WJJ54_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ7341125.1"
                     /translation="MEKSGIVYLMKTVIKGVYKIGISDVSNFEGRMRHLENNGYANVA
                     RLERILAVKTDNYKEKENLLHEIFSKSRIGDTELFAVDENLVKRLFLSLRGEIVFPKN
                     ETAESEFEKSVHERRQEGNAGSGRKQLLDLVRRGHREYPYALPWLLAGAASYKPKKSK
                     IRLFKEAYFGKSGTRLTDEIADGIHIYTCFSRADLEKAYSEYLELFKSESDAEGRKPQ
                     "
     gene            12188..12949
                     /locus_tag="WJJ54_000206"
     CDS             12188..12949
                     /locus_tag="WJJ54_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2314 domain-containing protein"
                     /protein_id="HEZ7341126.1"
                     /translation="MMGDSVIYYVEQADKPVNRAGERARKTFKYFWRELFWERRRIIP
                     ALDFAMVKAPFFQDGEDGEICEHMWIDDIYFDGLYIYGVLNNEPGELTNVEQGESVCV
                     PVDDISDWMFVCNGIPYGGFTIQAMRGQMTEEERTEHDAAWGIDFGDPGQVLLVYEEK
                     EHPENLEEHPMCRNCIDDFRQQLSQNPDFLHEQDEDGYTPLHHEAIAGNALMVQAMLE
                     YGANPASKTSEGYTALDFARLAGWQNVADLLEPRH"
     gene            13004..13345
                     /gene="fdx"
                     /locus_tag="WJJ54_000207"
     CDS             13004..13345
                     /gene="fdx"
                     /locus_tag="WJJ54_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HEZ7341127.1"
                     /translation="MPKITVLPHTTLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACE
                     KSCACTTCHVIIRKGFDSLEEPTELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIP
                     KYTINHAREEH"
     gene            complement(13445..14038)
                     /locus_tag="WJJ54_000208"
     CDS             complement(13445..14038)
                     /locus_tag="WJJ54_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEZ7341128.1"
                     /translation="MNNALTAKLSKLVYTAPDNPDFLSKIGEFDRLILLVRRLYQMLD
                     EQNALSRLTLCIRCQNQRGLIVLDGARADSDAATIRMKRWHIYTQIAERMANRYDQIS
                     VTVENETANPTQLEQYYLDIADKTIALFGLKEAKLQQQEYPEDKTQQQSILKKLSEKP
                     GRNLSMINTKAKIEQYAANQTQTPLKITRQRFICRPN"
     gene            14115..14312
                     /gene="iscX"
                     /locus_tag="WJJ54_000209"
     CDS             14115..14312
                     /gene="iscX"
                     /locus_tag="WJJ54_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HEZ7341129.1"
                     /translation="MKWTDTQRIAEDLYDLHGETIDPKTVRFTQLRDLIMALPEFDDD
                     PARCGERILEAVQQAWIDEAE"
     gene            complement(14380..14781)
                     /locus_tag="WJJ54_000210"
     CDS             complement(14380..14781)
                     /locus_tag="WJJ54_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEZ7341130.1"
                     /translation="MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKV
                     KNSKTIDIGDIIDLTLNSLPYKIKVKGLNHQRRPASEARLLYEEDAKTAALREERKQL
                     DQFSRITSAHPDGRPTKRDRRQLDRLKKGDW"
     gene            14992..15951
                     /locus_tag="WJJ54_000211"
     CDS             14992..15951
                     /locus_tag="WJJ54_000211"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEZ7341131.1"
                     /translation="MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIHRLQKKS
                     NDLTKSIFSKLTPAQVSQVSRHPQRPYTLDYIDALFTDFEELHGDRHFADDHAIVGGL
                     ARFNGQSVMVVGHQKGRDTKEKIRRNFGMPRPEGYRKALRLMKTAEKFGLPVMTFIDT
                     PGAYPGIGAEERGQSEAIGKNLYELTRLHVPVLCTVIGEGGSGGALAVAVGDYVNMLQ
                     YSTYSVISPEGCASILWKTAEKAADAAQALGITADRLQKLDLVDTVIKEPLGGAHRDF
                     GQTMKNVKAVLEKQLHEAQSIPLADLLSRRFDRIMAYGKFSEQ"
     gene            16019..17329
                     /gene="tilS"
                     /locus_tag="WJJ54_000212"
     CDS             16019..17329
                     /gene="tilS"
                     /locus_tag="WJJ54_000212"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEZ7341132.1"
                     /translation="MLTLDAFEQCLKDCFPQGLNGKKTAVALSGGLDSVVLLHLLVRA
                     GKKGGFIPDALHIHHGLSPRADDWADFCQNYCDMLGVGLETVKVCVEKNGLGIEAAAR
                     QKRYAAFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRALAAMPTVRPFGEKGIIWR
                     PLLPFSRQDIWDYAQKHGLPNIEDESNSDTAYLRNRFRHRILPELSAQIPHFGRHVLN
                     NVRALQEDLALLDEIIGQDCRWVCEEGSFDTVRWQAFSPRRKTHILRYFLKENGIPMP
                     NQNALADIARVLTEAKTGRWNLQGFELHHYAGRLFVFRLEKTDKLRFLKDRQISGNLR
                     EILTGQGFVLKRHPFGLPEHLLEQDGILRTVAVSDTLAVGGIHKDVKKILQGKRVLPV
                     LRPIWPLVADSGNRPLALANCCADFQISVSDGILPFHPDFPILF"
     gene            17403..18188
                     /locus_tag="WJJ54_000213"
     CDS             17403..18188
                     /locus_tag="WJJ54_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEZ7341133.1"
                     /translation="MRHISSTNNEHIRHLHRLLSQGKFRRQYAQTVLEGVHLLQVFLQ
                     SGGMPVGVYIPEGKMPSEEIRRLRAVVPEGRIFSVSDGILKKISSLSCADDILALIDI
                     PLGGTLPDKGDCVVLDGVQDPGNVGTVLRSAAAAGVGTVVLGRGCADAWSPKVLRAGM
                     GAHFLSGIYPQADLEIWLARYKGRVFATALREEKQAVLYGEDLCGPTAWVFGNEGAGV
                     GKAVLDRADKCVRIPMHDATESLNVAMAATICLFEQMRQRSAY"
     gene            18198..18395
                     /locus_tag="WJJ54_000214"
     CDS             18198..18395
                     /locus_tag="WJJ54_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341134.1"
                     /translation="MPSEKIYYGVLIFLCIASMLLSPFFYAGALKPKKAALRKDGQWK
                     LILLSNTVAAAVLAWVWWKWF"
     gene            18657..19010
                     /locus_tag="WJJ54_000215"
     CDS             18657..19010
                     /locus_tag="WJJ54_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341135.1"
                     /translation="MKNCEFFYDPTRAIYDSGADYLTREKHRLVVIANSAWGLLLNLS
                     CYYDEVLEKRKIPFGKQEIDDDMDKVSALKRKFKDISEIKVGDGWEYPFNYEQGMKEL
                     DEVLLKYIPFFEEER"
     gene            19022..19327
                     /locus_tag="WJJ54_000216"
     CDS             19022..19327
                     /locus_tag="WJJ54_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341136.1"
                     /translation="MRVSKIIGSMLLVTAVQTVFSANVYACRHNGKTSYSQTPGKHCT
                     NAGLGRDRVYSSVRPAVKDRAEDAGVGDYSDTVRDEHVQNPRENTHKDASNTGAKTH"
     gene            19389..20765
                     /gene="mpl"
                     /locus_tag="WJJ54_000217"
     CDS             19389..20765
                     /gene="mpl"
                     /locus_tag="WJJ54_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HEZ7341137.1"
                     /translation="MKHIHIIGIGGTFMGGIAAIAKEAGFEVSGCDAKMYPPMSTQLE
                     ALGIGVHEGFDAAQLEEFKADVYVIGNVAKRGMDVVEAILNRGLPYISGPQWLAENVL
                     HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPN
                     SKSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFANLGAIQTQFHHL
                     VRTVPSEGLIVCNGQQQSLQDTLDKGCWTPVEKFGTEHGWQVGEVNADGSFDVLLDGK
                     KAGHVAWSLMGGHNRMNALAVIAAARHAGVDIQTACEALSAFKNVKRRMEIKGTVNGI
                     TVYDDFAHHPTAIETTIEGLRQRVGNARILAVLEPRSNTMKLGTMKAALPESLKGADQ
                     VFCYAGGVDWNVAEALAPLGGKLHVGKDFDAFIAEIVKHTEAGDHILVMSNGGFGGIH
                     TKLLDALR"
     gene            20972..22024
                     /gene="bioB"
                     /locus_tag="WJJ54_000218"
     CDS             20972..22024
                     /gene="bioB"
                     /locus_tag="WJJ54_000218"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HEZ7341138.1"
                     /translation="MTVSPVALRRKTECKPHPTARYWKKCDVEALFGLPFLDLIYQAA
                     EIHRQNFNPREIQLSTLLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAK
                     IAKSRGASRFCMGAAWRGPKPKDVETVSAIIKAVKGLGMETCGTFGMLEEGMAEDLKE
                     AGLDYYNHNLDTDPDRYNDIIHTRRHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAER
                     AGLIASLANLDPQPESVPINRLVKVEGTPLADAEDLDWTEFVRTIAVARITMPQSYVR
                     LSAGRSNMPEAMQAMCFMAGANSIFYGDKLLTTGNPDEDGDRILMEKLNLYPLQFELE
                     GEVAEVEKASGIKVDY"
     gene            complement(22103..22737)
                     /locus_tag="WJJ54_000219"
                     /pseudo
     CDS             complement(22103..22737)
                     /locus_tag="WJJ54_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575362.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
     gene            23060..23320
                     /locus_tag="WJJ54_000220"
     CDS             23060..23320
                     /locus_tag="WJJ54_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEZ7341139.1"
                     /translation="MTKAVRRKNVQTPKICYAFRTPSAYGQYLADAGFDYLSFANNHS
                     NDFGAQGITATAASGSSFTYSIALKPLPITRPKLRKIPPSPR"
     gene            complement(23383..25242)
                     /gene="ilvD"
                     /locus_tag="WJJ54_000221"
     CDS             complement(23383..25242)
                     /gene="ilvD"
                     /locus_tag="WJJ54_000221"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEZ7341140.1"
                     /translation="MPDYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFT
                     QFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD
                     SIEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQ
                     PERRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSL
                     PGNGSYLATHAGRKELFLEAGRMIVEITKRYYEQNDETVLPRNIATKKAFENAMTMDI
                     AMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGG
                     IFAILKELDKAGKLHTDVHTIHAPTLKDAIEKWDVTNPENTRAIERFKAAPGGVRTTQ
                     AFSQNRMWKTLDLDREKGCIRDVAHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILK
                     FTGRARVFESQEAAVEGILGNQIVAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLG
                     KACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTVEIDIPNRSIHLVISDE
                     ELAARRAEMEARGSKAWKPENRDRYVSAALRAYGAMATSADKGAVRDVAQIER"
     gene            complement(25415..27184)
                     /gene="cysI"
                     /locus_tag="WJJ54_000222"
     CDS             complement(25415..27184)
                     /gene="cysI"
                     /locus_tag="WJJ54_000222"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HEZ7341141.1"
                     /translation="MTVQTKTKGLAWQEKPLSDNERLKTESNFLRGTILDDLKDPLTG
                     GFKGDNFQLIRFHGMYEQDDRDIRAERAEAKLEPLKFMLLRCRLPGGIIKPSQWIELD
                     KFARENSHYRSIRLTNRQTFQFHGVPKAKLQTMHRLLHKLGLDSIATAADMNRNVLCT
                     SNPIESELHRQAYEYAKKISEHLLPRTRGYLDVWVDGKKVQSSDDFLQEDEPILGKTY
                     LPRKFKTAVVIPPLNDVDCYGNDLDFVAISDGNGQLAGFNVLAGGGLSMEHGNTKTYP
                     NISLELGFVPPEHALKAAEAVVTTQRDFGNRSDRKNARTRYTIQNMGLDNFRAEVERR
                     MGMPFEPVRPFKFTGRGDRIGWVKGIDGNWHLTLFIESGRLVDEGGKQLLTGVLEIAK
                     IHKGDFRITANQNLIVANVPEGGKARIEQLARSYGLIHDGVSKLRENAMSCVSFPTCP
                     LAMAEAERVLPDFIGELDKIMAKHGTSDDYIVTRITGCPNGCGRAMLAEIGLVGKAVG
                     RYNLHIGGDREGVRIPRLYKENITLPEILSELDDLIGKWAAGRDTDEGFGDFAIRTGI
                     VKPVLDAPVDFWDASKAVPIARA"
     gene            complement(27211..29025)
                     /locus_tag="WJJ54_000223"
     CDS             complement(27211..29025)
                     /locus_tag="WJJ54_000223"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
                     /protein_id="HEZ7341142.1"
                     /translation="MSEHDMQNTNPPLPPLPPEITQLLSGLDAAQWAWLSGYAWAKAG
                     NGASAGLPALQTALPTAEPFSVTVLSASQTGNAKSVADKAADSLEAAGIQVSRAELKD
                     YKAKNIAGERRLLLVTSTQGEGEPPEEAVVLHKLLNGKKAPKLDKLQFAVLGLGDSSY
                     PNFCRAGKDFDKRFEELGAKRLLERVDADLDFTASANAWTDNIAALLKEEAAKNRATP
                     APQATPPADLQTASEGRYCKAAPFPAALLANQKITARQSDKDVRHIEIDLSGSDLHYL
                     PGDALGVWFDNDPALVREILDLLGIDQATEIQAGGKTLPVASALLSHFELTQNTPAFV
                     KGYAPFADDDELDRIAADNAVLQGFVQSTPIADVLHRFPAKLTAEQFAGLLRPLAPRL
                     YSISSSQAEVGDEVHLTVGAVRFEHEGRARAGGASGFLADRLEEDGTVRVFVERNDGF
                     RLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGKNWLIFGNPHFAADFLYQTEWQ
                     QFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCGDAAKMAKD
                     VEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVY"
     gene            complement(29022..30308)
                     /locus_tag="WJJ54_000224"
     CDS             complement(29022..30308)
                     /locus_tag="WJJ54_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit 1"
                     /protein_id="HEZ7341143.1"
                     /translation="MTAQHQTPLRFITAGSVDDGKSTLIGRLLYDSKALLSDQIKTLE
                     SGKSKGLKETIDFSILTDGLEAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRN
                     MVTGASTASAAVVLVDASQLDFGAQPLQLLPQTKRHSAILRQLNCPHIVVAVNKMDLL
                     DYSEDKFNAIVEAYRRLAEQLGLKDAHFVPVSALLGDNIVYPGGNMPWYKGEPLLSIL
                     ETLPGADEVSRTADDFYFPVQLVVRQDADKADDFRGYQGRIERGSVAVGQTVRIEPNG
                     LTAEVSEIITPKGEVAQAFAGEAATLRLDRDIDVSRGDLFVDKNSPLAPQKHLEVTLC
                     WFDERPLNTARKYLLKHGTQTVSAKVGEIESVLDVRTLEQEAGAESLKMNDIAKVRIN
                     LQKPVTATPYAENTAAGSFILIDEATYGTVAAGMIL"
     gene            complement(30347..31270)
                     /gene="cysD"
                     /locus_tag="WJJ54_000225"
     CDS             complement(30347..31270)
                     /gene="cysD"
                     /locus_tag="WJJ54_000225"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HEZ7341144.1"
                     /translation="MTKTEPNNAQLDWLESESIHIIREVAAECENPALLFSGGKDSVV
                     LLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARLIVGRVEDSI
                     AKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERIFSFRDEF
                     GQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYIARENLELPPIYYSHR
                     REVVRRRGLLVPVTPLTPKMPSETSEILDVRFRTVGDISCTCPVESTASTPTEIIRET
                     AVADISERSATRLDDQASEAAMEKRKKEGYF"
     gene            complement(31308..32042)
                     /locus_tag="WJJ54_000226"
     CDS             complement(31308..32042)
                     /locus_tag="WJJ54_000226"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HEZ7341145.1"
                     /translation="MKIFKPALWKIPPIENGSETALAEKTETLKQRLHRIAGSHRDAR
                     FASSLAAEDMVITDLIAGENLNIGIFTLDTGLLHTETLNLLDRLGRAYPHLRIKRFRP
                     VREDADRYVESKGRFAFYDSVEARRECCRIRKIEPLNRAIAGADAWLTGQRREQSATR
                     TELPFAEYDAGRGIGKYNPIFDWSEHDVWAYILANNVPYNDLYRQGFPSIGCDPCTRP
                     VKAGEDIRAGRWWWEGRNSKECGLHK"
     gene            complement(32058..33518)
                     /gene="cobA"
                     /locus_tag="WJJ54_000227"
     CDS             complement(32058..33518)
                     /gene="cobA"
                     /locus_tag="WJJ54_000227"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEZ7341146.1"
                     /translation="MNYFPIFANLAGRPVLVVGGGAVAARKISLLLKAGAEVRVAAKH
                     LNAELSALAAENKILWLAEEFRAEHIRTVFLIIAASSDQALNRRVFHLAESCQKPVNV
                     VDDRDHCSFIFPSVIDRNPVQIAVSSSGSAPVLARLLRERLEALLPPSLGDMAEISGR
                     WRDAVKGKLKSVTERRRFWEKQFNGRFAALVKNRQNTLAERELAGQLEQSRQNDQGGS
                     VSLVGAGPGDAGLLTLKGLQEIQQADVVLYDALVSDGILSLVRRDAERIFVGKRARGD
                     RTPQEDTNALMVRLAREGRRVVRLKGGDPFVFGRGGEELEVLARHHIPFSVVPGITAA
                     VGATAYAGIPLTHRDYAQSAVFVTGHRKADAPDIEWQTLARSRQTLVIYMGTLKAALI
                     AERLQQYGRPPDTPAAVISHGTQSTQSTAIGTLANLARLAENAPKPALIVVGEVVELH
                     EKLAWFGENAKKESNPAEHAYFALDGLGTGQEQQAA"
BASE COUNT         7384 a         8604 c         9608 g         8092 t
ORIGIN      
        1 gtcgccttgt cctgattttt gttaatccac tatacgtcct agattcccac tttcgtggga
       61 atgacgggat gtgggttttt gtgcggattt gaaccggtaa gggtggtgtg ggattggtgg
      121 tttgcttagg atcttttgga ttgtagtttg tatatacatt tacttgttga taaaagataa
      181 aataaaatta gaaactaaaa gtgagaaaaa attaataata atagggatgt ataaatgtaa
      241 aggctccgtt tcatagctaa ggttatctga atatatggaa aaaaaagtaa aagtccataa
      301 aactaaaata tatagataat gctaatgata atagaattat cactttccta gagtaaggat
      361 aatatttttt tatcgtaaaa aaatataaaa taggataaat aattgccata tagatagatt
      421 ttgtaacaaa attaaaaata aataataaaa ataatgtaat aaagtatatt ttttggctat
      481 gaaataaaat tgtacataat tgaacgagca gatcaaaaaa tgaactacat ataacaataa
      541 ataataacgt atttaccata ctaaatttaa taggtctcat tatcatattt aataaccact
      601 tcatagtata gtggattaaa ttcaaaccag tacagcgttg cctcgccttg ccgtactatc
      661 tgtactgtct gcggctttgt cgccttgtcc tgatttttgt taatccacta taaatgcaga
      721 gtgggtggaa acactcactt tatggtttgc tacgctctgc tcaattagca acccgataac
      781 ccaatatgga taatagggta attaatccaa tctaatttgt cagcatccgt taatttattg
      841 caaaataaag tattgaatta tgtcgggtgc aaatgacgaa atataagttt ccgtgcggac
      901 ggatcaagat tcccactttc gtgggaatga cggtggaaag attgttgttt ttcccgatga
      961 attcctgtgt tttttgtttt tccggataaa ttcctgtggc tttgagtttt tgggatttca
     1021 gccccaatgc cgtctgaacg ccgaatcggg cttcagacgg cattgcgtca tttgaaattc
     1081 aaaaccggcc agcctttttc tttggcttct ttttccagct cggcatcggg gttgacggcg
     1141 acgggttcgt cgacgaggcg cagcagcggc aggtcgtttt tggagtcgct gtaaaaatag
     1201 gttttgccgt agctttcgag cgtttcgccg cgttcggcga gccattggtt caggcgggtg
     1261 attttacctt ctttgaggct gggcgtgccg atgtaattgc cggtgtagcg gccgtcggaa
     1321 ccggattcga gttgtgtgcc gatgatgttg gtaatgccga aaaggcggca gacgggggtg
     1381 atgatgaact cgttggtcga tgagatgacg agggtttcgt cgcctgccat ttggtggctc
     1441 tgcaccagca tacgctgcat aggcgagatg tgggggatga tgtattccgc cataaattcg
     1501 cggtgaaact ctgccagctc ttctttgctg taacgagcga gcggggcaag gtggaatttg
     1561 aggaatgcgt cgatgtcgag gcaaccgttt tggtagtcgc ggtagaattt ttcgttttgc
     1621 gcttcggttt cggcagcgtc aaccaagcct tttttgatga ggtattgcgg ccaggcgtgg
     1681 tcggaatcgg tgttgatgag ggtgttgtcg aggtcgaaga tggcgaggtt tttcattggg
     1741 tttcctgttg tttcaaaagc tggcgcaaaa gcggcagggt gatgcgtttg cccattgtga
     1801 cggcgtagtt gtccagcgtg tcgagcatca tcatcaggct gtccatatcg cgccgccagt
     1861 gtttgagcag gtattcgaaa atttcggaat cgacggttac ttggcgtgcc gccgccatac
     1921 tggcgagcgc gtcgattttt tcttggtcgg ttaagggttt gacttcgtaa acgaggcagt
     1981 acgccatacg cgtccgcaaa tcttcgcgga tgacaagctg ctggggcgtg tattccgaac
     2041 cgagcagcaa aaagcctttg ccgctgttgc ggaagcggtt gaagatggaa aaaagcaggg
     2101 cttgttcttc gttgcccagt ttttcgactt gatcgacggc gaggtattcc gcctcgaacg
     2161 cggcatcggt cagcggcatg gaggcggcat cgatataggc ggcgtttttg ccggcttcga
     2221 gcgcctgtgc gacccacgcc tgcaaaagat ggcttttgcc cgcgccttct tcaccccaga
     2281 catagataaa ctgtccgtgt ttgtgtcgga ggacatagac cagttccgcg ttttccgtgc
     2341 cgaggaattt gtcgaaactc ggatagtcgt gtgcggcaaa gtcgaaaata agctgattca
     2401 cggttcggca ttccgagggg tggtaaacgg gtttattgta cgttgttttc gcgcgccttt
     2461 ccaatttgaa cgatgccgtc tgaaaacggc ttcagacggc atcgttcaac cgcaggcaac
     2521 gttgccgaca tcgaggcgca tattgtggaa cgcgttgagc gtgcttcggt gtccgatgct
     2581 gatgatgatg ctgtcgggca gtttttgctt taaggcgcgg tagagcgcgg cttcggccgg
     2641 ttcgtccaag gcggcggtgg cttcgtcgag caggacgatt ttgggcttgg aaagcagggc
     2701 gcggacgaag gcgacgcgtt gcagttcgcc cagggagagt ttgtgctgcc agtcgtctgt
     2761 tttgtccaat ttgtcaatca gataacccaa gcggcaggtg ttcatggctt cgattagctc
     2821 cggatgctgt ttgtcgatgt cgggataaca aaccgcgtcg cgcaggctgc cctgtgccgt
     2881 gtacgggcgt tgcggcagga agaggatgtc ttgatgcggc ggacggctga ctttgccgtt
     2941 gctgccgaac ggccaaagcc cagccagcac gcgcagcagc gaggttttgc cgcaaccgct
     3001 cggaccgcgt atcagcaggg aatcaccgct tttgaggttg atattgatac cgtctaataa
     3061 aacttcgccg ttgtggcgga acagagcgac gttttccagt gcaatgccgt ctgaaacttc
     3121 gctaatctcg ggttgccgcg cgctgtgttg ttcttcggta ctcagcaaaa agccgtacag
     3181 acgctccaat cgggcgcggt aggcggtgaa tttgttgtag aacattcgaa agaaagaaag
     3241 cgcgttttac agtcgcgcga aggcttggac ggtttgctgg atgtcgccga ttttgatttg
     3301 tccggcaaac aggcgcggag cttgcaaaat aatcgggaag agtttgatgc cgttggtgaa
     3361 catatcgtta aagccgctta agcagacgct ttgccgcgca atgcgccaac ggttgcggat
     3421 aatggcttta aagcggtcgg aaagctggtc gtattcatgt ttttcgccgt tgtaaaacgc
     3481 cacgctttcg gcgtggtcgc gcacgcggat gagggaataa cggtagtcgc cgttgagttt
     3541 ttcgttttca taattgtaac gaatcaaagg gttgcctatc cacatggcga taaaggtcgc
     3601 caaaatcaca aatatataga caaaccaaac gatgccgtgc ggaatgtcga agccgaacac
     3661 ggtcaggatg ccagccaagc cccgcaaaac aacggcaaat tccagagaag taacgaccga
     3721 attgaccatg ccgcgcacaa attcgatggt cgaagcgata aattcctgcg cgtcctgttg
     3781 gatacgctgg tcgatgttgt ctggcgcgtg gcggcgcatt tgcaggcggt agtagttttt
     3841 gtcggcaagc cagcgtgctg tcagcacttc gttgagccgc tccgaccatt taatcgccaa
     3901 gccttgatcg aggaagtcgt tgacgacgtt gttaaacgcc cgtatcagca ccacgcccgc
     3961 gttcattgca gcaaacatcc aaaatgccga agcatttcaa atcctgcatc gagtcgtaaa
     4021 gccctttgga cataaaggta ctcaacacat tcagccgcat ttcggttaac accagcgtaa
     4081 tcatcgccgt aatcagcagc aagactttga ccgcgctttt cagtgtcaga caaagccaaa
     4141 gcggtgtgga ataaagctcg gtttgccatt tctgcatggg aaatttctta cggtatcaat
     4201 gccgtctgaa aaagacgggt acagttgatt ttttgatgaa gtttggggaa gttttgcagg
     4261 tcagggcata ttgcgtgtta atttaccata caaccacgcc ggaattaagt ttaaatttga
     4321 ataaaaggtt cgggttctgc aaaatacaga acccgaacct tgttcggata ttgaaaccgg
     4381 ccgcccgatt ttgggcggtg cggcttgcaa gtatcaagat tcgcatatgc cgtctgaagc
     4441 tcggagaggt tcagacggca tatgcttatt tgggctgctc ttcgacgaat ctcggacctt
     4501 tcaagatgcc gttgtgagaa tagggcgaca gcaggttgta tgcggcggtt ttggaaacct
     4561 gataaccgcg gtcggtcagg ctgttggcaa tctgattgac cactgcgctg accaaagccc
     4621 ccaacaggcc gctgttgctg ttgttgctgc cttcgcggat gctggccgaa cccgaccaca
     4681 actcttttgc gggaatcgac cagccgtgct ttggcggata cggtcgtcac gctgtctaaa
     4741 atttgatatg aagtgccgta ttcggtaacc gtaatgtaca aaaccgcatc attgccgaaa
     4801 atctgatgca gtttttccgg ccggacggcg tgaatatcgg cggcattggt caagccgttt
     4861 tgtttgaagg tttcctccac gactgcggcg gggaagacgt aatagccggc ttcggaaagc
     4921 ggcgcggcgg tcgaagccag tacaccccat gttccgttga catcgggcga ttcgttcagc
     4981 ggcggaacca ccaaaattga agccggtttg ctttccttga atgacgtgta gtcgaaatcg
     5041 ggagcttttt gaacttggca ggcagacagc gccaacacgg cggcaagccc taaaatcaaa
     5101 ggtttcatcg cttgcctcct ttaccggttt tcatcaggaa gtccataaat acgcccgatt
     5161 cgggaaacag ccttttctct tcttcaaact ggcggaacgc gccctctttg tctcccgaac
     5221 gggaaagcag cagtcccaga tgggcgtgcg cacccggggc ggcattcatt tttttgttgc
     5281 cggcttccac aaagtatttt tccatctttt cggtctgctt gcccaacgaa gtgtcgtcgt
     5341 ttttcaaacc ttcatagacg gtatcgggat agccgccgta ataatacagg gatttttgcc
     5401 cgttgtcgcc gcaggcggtc agagccaaga ccgccgcaca cagcgacaaa cggctcaagg
     5461 ttttcggatt catcatttct ccttaacggt tgggttgcca tgcgccgttg tcaacagcct
     5521 gaaccaggct gttgacggct tcgcggattg ccaagtctaa aactttgccg ttcaaagtcg
     5581 catcgtagcc ggaagtgccg ccgaaaccga tgatttcacg gttggaaagt gcgtattcgc
     5641 ccgcgccctg tgcggaatag acgatttcgg aagtattgac gttgacgata ttcagagcca
     5701 cttttgcata ggcgatttgc gatttgccgc gacccaaaat gccgaagagc tgatgatcgc
     5761 cgacatctct gcgtccgaat tcggttacat cgccggtaac gacataatct gcgcctttca
     5821 ggttatgcgc tttgccggaa atgccggatt cctgttttaa tgcgttcaaa ttggtgcggt
     5881 tcagtacgtt gaagcggttg gtctgttgca ggtgcgttac cagaatggtt tttgcctggc
     5941 tgcccaaacg gtcttccccg tcggagaaaa tgcctttttg gaagctggag cggttgtcga
     6001 atgttccgac ggaaatcggg gtacgaacac cgtgatattg cgtattgtag gaggcgactt
     6061 tctctacctc gagactgcgt gaggattcgg tcgcacagcc ggtcagtgaa acggcagcgg
     6121 cggcaaggac aacggcggtg gaaacggttt tcataaaatt taccctaagg tcaagttaag
     6181 gaaataacgg gttgtcatta ttgtccttat gtaaatttaa gtcaaggtgt ttgtctgtgc
     6241 gggacggatg cgcgcggaag gtacggatat ttttcaaacg gaatcgcggc gcgggcggga
     6301 tgcctgcctt ttccggattt agaggtaaac gatttcgcca ctccgccctt tgctttcggt
     6361 acttgcccac cagacaaatg cgggcagcac gtccccgtag cttttgcgtt cgcttttggc
     6421 ttcgcccgga tgggatttga tgcgttgcgg ggaattgatg gggccgggga cgaggacgtt
     6481 ggcgcgcagg ttgccgaagc gttcccattc gtcggcggcg actttgcaca ggtagttcaa
     6541 cgcggctttg gacgcgccga agccgcccca gtaggctttg ggtgtttcgc cgtggctttc
     6601 gccgacgaag atgacggacg cgtcgggcga ctgcttcagc agcgggaaca gggcgcgggt
     6661 cagccccata ggtgcgacgg tgttgatgcg gtattggttg acccattcgg cgacggtttg
     6721 gaaatccagc ggcgagaggg cgtaaaaata gccggcgcag tggacgatgc cgtccagttt
     6781 gccttgcgtg gcttcggcaa tggtggcggc gaactgattg aattcttttt cttccgcgct
     6841 aataaggtca aagcagatgg cgaatggttc ggggtatccg gcttcgacaa tcgcgtcata
     6901 cactttttcc agttttttct gatgacgggc aaccaaaatc acagtcgcgc ctgctgccgc
     6961 ataggctttg gcaacctgtt cgcccagccc ttgcgatgcg ccggtaacta agatggtttt
     7021 gtcggtcagt gtcgccatac tttttccttt ttggtggtcg gtcgggggta ttttagcgtt
     7081 ttgccgcacc ttgtaaagcg tcctgatgcc ggccggcgtt ttcagacggc atcgttcagg
     7141 ctttgcaggc aggcttccgc ggaagcgaaa cctgattgta cggcggcttc gagcgtggcg
     7201 gggtagtatg ggtggaggta gtcgccggcg gggaagatgc ggtgccggtg cagccacgac
     7261 aaatccggtg gtggggcatc ggctgcggtt gtggcgcgtt tttcggtgat gacgcgcacg
     7321 gcttcgggtt cgcccaaatg cggaaggatg cgtttgaggt cggcgtgggc tttgtccgcc
     7381 cacgcccggt ttgcaaacgc gccgacgcgg tcggaaacgc tgatgacggc ggacacttcg
     7441 ttttcaggca gtccgagcct gccccggcaa agcagccatt gcaccgtgcc gtcggcaagg
     7501 ccggtcagcg gggcgggcag gcggacgggt tcggcgtagc gcagatagac ggtggtgatg
     7561 gcgtgatagc gaaggttttg atatgccgtc tgaacgtgtt cgggcgtgcc ttcgggcagg
     7621 agcgcggcgg cgtggtaggg cgcggtggcg gggacggcgg catcgaaagc ttcgccgttg
     7681 acgagcactt tcccgtccgg gagggggttc agacggcata cgcgcgtttc gaggcggatg
     7741 tccgcgccga gccgttgaag ctccgccaag gcgggttcgg cgacgattgc gcccaaatcc
     7801 tgcttgggta ggagatagtc gctgccggat tttttcgtca gcacgccgtc ggacaaaacg
     7861 ttgcacaaca cgcgcaggct tgcggtttcc aaaggcgtgt tgagcgcacc ccacaccagc
     7921 ggctgccaaa actgcatcac ggcggcacgc ggcacgttcc gctgtttcag ccattgtgca
     7981 actgtcgtgt cgggctgtcc gaggcgtgcg gacttctgca aatcggacat atcggcaagc
     8041 agtttggctt tgaatgcagt cggtgcacgc cgggcaagca gcacgccgcc caaaatatgc
     8101 agcggcgcgg gcagggggag ggcgcggaac tgcaaaccgc cgtgcatatg ccagtgcagc
     8161 ggtacgcgca aaaaggcggc acggggatcc gaaccgatgg ttttcatcag gcgcaacacg
     8221 ccccggtatg cgccgagcaa aatgtgctgc ccgttgtcca aaaaaccgaa accgtcggta
     8281 tttccggcca gtgtgcgcgc cctgccgccc gcctgccggc cggcttcaaa cagggtaacg
     8341 tcggcgtgcc gcgccaaggt gacggcggcg gacagtcctg cccagcctgc gccgatgacg
     8401 gcgattttcg ggcgcggatg cggcgtgttc atcatttatt cctccaatgg ttgaaacccc
     8461 gtttttcggg gcggcggggg ttgggttttc ctgaagggcg ggcggtatgc gccttatgcc
     8521 cgttccggcg tgccggggcg cggtttgaat ccgaataacc aggttttcag ggcaatgcgt
     8581 tttttgcgcg gcgaagggag ggcgattttg tatttgagga cgttttgcgc gccgtcccgg
     8641 tcgatttcgt tcaatagctc gtaataaacc gccgccataa ccagtccgac tttttgggct
     8701 tttttatcgg cagccggcag cagcgatacg gcttcgcggt aggtttcacg ggcgcgtttg
     8761 atttggaacg ccatcaattc ggcaaaattg cccgtcgggc tgcattgcaa aatcacgctt
     8821 gcggggacat caaaccgctg catttcctcc atcggcaggt aaatccgtcc cctgcgcgcg
     8881 tcttcgccga catcgcggat gatgttggtc agttgcagcg caagtcccat cttgtcggcg
     8941 tattccagcg ttttgccgtc tgaaaacccc aaaatccgcg caatcaggca gccgactaca
     9001 cctgcaacac ggcggcagta cagtttcaat tcttcaaaac tgccgtaacg cgcccgaacc
     9061 aaatccatct gcatcccgtc gattaaggct tccagttcat atttcggcag cttgaaggtt
     9121 tccttaacct gccgcaaggc ctgattgacg gggtgttccg gcatcgcgcc gccgaatacc
     9181 ttgtccaaat cgccgcgcca ccagttcaat gtcgcctgtg caacatcggg gttggaacat
     9241 tcgtcaacca catcgtccaa ttcgcggcaa aaagcatata aaaccgttac cgcatcccgt
     9301 ttttcctgag tcaggaaacg gaagcccgac aaaaaactgg agcggctttc ttctgctttt
     9361 tggcggcaat agtcgagtcc tttcacgatt tatattccta atgatgggag ggaaaggcgg
     9421 attttatcgg catttggcgg tagagggcaa tttcggcggc acgacccaat ccttagcggt
     9481 ttgctcaact atcggcgcga attctgttaa aatgccgact tccttccttt acacaccgca
     9541 ccgacaggca gaatttatgg ctcttttgca gatttcagaa ccgggtatgt ccgccgcccc
     9601 gcaccgacac cgtttggcgg caggcatcga tttgggtacg accaacagct tggtcgccac
     9661 cgtccgcagc ggcagtgccg cctgtctgcc cgatgccgaa gggcgcgtta ccctgccttc
     9721 cgtcgtccgc tatctggaaa acggcggcat tgaagtcggc aaaaccgccc tgtccgccca
     9781 aaaaaccgac ccgctgaaca ccgtcagctc cgccaaacgc cttatcgggc ggacgcttgc
     9841 cgatctgcat caaaatacgc attacctgcc ttaccgtttc ggtgacaatc aacgcgttat
     9901 cgaactgcat acgcggcagg gggtgaaaac gcctgtcgaa gtgtcggcgg aaatcctcaa
     9961 aacccttaaa tcgcgcgccg aagaaacctt gggcggcgat ttggtcggcg tggtgattac
    10021 cgtccccgcc tatttcgacg atgcccaacg ccaggccacc aaagatgccg cgcgtctggc
    10081 gggtttgaac gtattgcgcc tgctcaacga acccaccgcc gccgcaatcg cctacgggct
    10141 ggacaacgcc tcggaaggca cgtttgtcgt gtacgactta gggggcggca cattcgacgt
    10201 atccgtattg caactgacca aaggactgtt tgaagtcaaa gccaccggcg gcaacagcgc
    10261 gttgggcggc gacgacttcg accatcgttt gttctgccac ctgctcgaac aaaacgagct
    10321 ctccaaactc aacgagcaag acagccggct gctgctttcc cttgtccgta gtgccaaaga
    10381 aaaactgacc gctcaaaccg aagccgtcat cgaaaccaca ctttcagacg gccataaagt
    10441 tcataccgtc attacccgcc aagagtttca caatctgacc caaaatctgg tacaaaaaac
    10501 catcgagccg gtcaaacagg ctttgaaaga tgcgggcgtg ggcaaggcgg atgtcaaggg
    10561 cgtgattatg gtcggcggtt cgacccgtat gctgcacgtc caacaagcag ttgccacatt
    10621 ctttggtcaa accccgctga acaacctcaa tcctgacgaa gtggtcgcgc tcggcgcagc
    10681 catacaggca aacgtcctcg ccggcaacaa agccgacggc gaatggctgc tgctggacgt
    10741 tactcccctg tcgctcggtt tggaaaccta cggcgggctt gccgaaaaaa tcatcccgcg
    10801 caattccacc atccccacct cgcgcgcgca ggacttcacc acgttcaaag acggtcagac
    10861 cgcgatgacg atacacgtcg tacaaggcga acgcgaactg gtttccgact gccgcagcct
    10921 tgccaaattt accttacgcg gcattccgcc gatggcagca ggcgcagcgc gtatccgcgt
    10981 aaccttccaa gttgacgctg acggattact atccgtttcc gcacaagaac aaagcaccgg
    11041 cgtacaggcg caaatcgaag tcaaaccttc ctacggcttg gacgacagca ctatcaccca
    11101 aatgctcaaa gacagcatga gcaacgctgc cgaagacatg gccgcacgcg cacgcgccga
    11161 agccgtagtc gaagccgaaa gcctgaccga tgccgtcaac gccgcccttg aattggatgg
    11221 cgatttgttg gaagccgaag aattgcaaca aattcaacaa gacatcgccg atttgcaagg
    11281 ccgtctgaaa gacggcaaag ccgaagacat ccgcgccgcc gtcgccaaac tcggcagcat
    11341 taccgacaac ttcgccgcca agcgcatgaa ccgcaacatc caacgtgcgc tggcggggca
    11401 aagcgttgat aatatttgat ggcaaatggt ttcagacggc acagatataa cctgatgccg
    11461 tctgaaggct cgaaaacact tgaaaaacat cgatatggaa aagtcaggca ttgtctatct
    11521 gatgaaaacc gtcatcaagg gcgtgtataa aatcggcatt tcggacgtaa gcaattttga
    11581 aggcagaatg cgccatttgg aaaacaacgg ctatgcgaac gttgccagat tggaacgcat
    11641 cctcgccgtc aaaaccgaca attacaaaga aaaagaaaac ctgctccatg aaattttcag
    11701 caaaagcagg ataggcgata ccgaattgtt cgccgtggac gaaaaccttg taaaacgttt
    11761 gtttttatcg cttcgcggcg aaatcgtgtt tccgaaaaac gaaacggcgg aatcggaatt
    11821 tgaaaaaagc gtccacgaac gcaggcagga agggaatgcc gggtccggcc gcaaacaact
    11881 gcttgatttg gtacggcgcg gacaccggga atacccttac gcgctgccct ggcttttggc
    11941 gggcgcggca tcctacaagc cgaaaaaatc gaaaatccgc ctttttaaag aagcatattt
    12001 cggcaaaagc ggcacgaggc tgaccgacga aattgcagac ggcatccata tttacacctg
    12061 tttttcgcgg gcggatttgg aaaaagccta ttccgaatat ttggaacttt tcaaatccga
    12121 atcggatgcc gaaggcagaa agccgcagta aggtgcaaac agataccgta cacgttgagg
    12181 agcagatatg atgggcgatt ccgtcattta ttatgtagaa caggcagaca aaccggtaaa
    12241 ccgtgccggc gaacgcgccc gtaaaacatt caaatatttt tggcgcgagc ttttttggga
    12301 acgccgccgc atcattcccg ccttagattt tgccatggtc aaagcccctt ttttccaaga
    12361 cggcgaagac ggcgaaattt gcgaacatat gtggatcgac gatatttatt ttgacggtct
    12421 ttacatttat ggcgtgctga acaatgaacc cggagaactg accaatgtcg aacaaggcga
    12481 aagcgtttgc gttccggttg acgacatcag cgactggatg ttcgtgtgca acggcattcc
    12541 ctacggcggc tttaccatac aggcaatgcg tggacagatg acggaagagg agcgtaccga
    12601 acacgatgcc gcatggggaa tcgatttcgg cgatcccggg caggtattgc tggtgtatga
    12661 agaaaaagaa catcccgaaa atctggaaga gcatccgatg tgccggaact gtattgacga
    12721 ttttcggcaa cagttgtccc aaaatccgga ttttctgcat gagcaggacg aagacggcta
    12781 tacgccgctt catcatgaag ccatcgcagg aaatgcactt atggttcaag ccatgcttga
    12841 atacggcgca aatcctgcct caaagacatc ggaaggctat accgccctcg attttgcccg
    12901 cctggcgggc tggcaaaatg ttgccgacct gctcgaaccg cgacattagg cggacagttt
    12961 tccgaaaacg aacacaaaca ctttttacag aaagacaata aaaatgccca aaatcaccgt
    13021 acttccacac acgacattat gccccgaagg cgcggttatc gaagacgcgc ccgaaggcaa
    13081 aaccgtcctc gacgtgctgc tcgaccacga catcgaagtc gatcacgcct gcgaaaaatc
    13141 ctgcgcctgc accacctgcc acgtcatcat ccgcaaaggt ttcgacagtt tggaagagcc
    13201 gaccgaattg gaagaagacc tgctcgatca ggcttggggt ttggaagccg attcgcgcct
    13261 gagttgtcag gcggttgtcg ccggcgaaga tttgattgtg gaaatcccca aatatactat
    13321 caatcatgcc cgagaggagc attgacgcaa tgccgtctga aacatcatgc ggttcagacg
    13381 gcatcggata tgcataagcc ggagcagaag ggtaatcccg tatttgataa gggtaaaccg
    13441 gagtttagtt tggacggcag ataaaccgtt gtcgggtaat tttcagaggt gtttgtgtct
    13501 gatttgccgc atattgctct attttggctt tcgtattgat catactcagg tttcgaccgg
    13561 gcttttcgga tagctttttc aatattgatt gctgctgcgt tttatcttcc ggatattctt
    13621 gctgttgcag tttcgcttcc ttcaatccaa aaagagcgat agttttatcg gcaatatcca
    13681 gatagtattg ttcaagttgg gtaggattgg cagtctcatt ttcaactgtt acggaaatct
    13741 ggtcataacg gtttgccata cgttcggcaa tttgggtata aatatgccac cgcttcatac
    13801 gtattgttgc ggcatcggaa tcagcccgtg caccgtctag gacaataagc cctctttggt
    13861 tttgacagcg gatgcaaagt gtcagccggg aaagggcatt ttgttcgtcg agcatctgat
    13921 acagtctgcg gaccaatagg atcagacggt caaattcccc tatcttggaa aggaaatcag
    13981 gattgtccgg agcggtataa accagtttgg aaagtttggc ggttaaggca ttattcattc
    14041 agctatcctt ggcgggtata catttggaac atgttctata cggttgaaag accggaaaat
    14101 acaggaaaat taatatgaaa tggacagaca cacaacgtat cgctgaagac ctttacgacc
    14161 tgcacggcga aaccatcgat cccaaaaccg tgcgctttac ccaactgcgc gacctgatta
    14221 tggcattgcc cgaatttgac gacgaccccg cccgttgcgg cgaacgtatt ctcgaagccg
    14281 tgcagcaggc atggatagac gaggcagaat aagtttcggg aatgccgtct gaaatacggc
    14341 ggtacgcggt tcgtgcttct gtttgcagtg ggaacggttt taccagtctc cttttttcag
    14401 cctatccagt tggcggcggt cgcgcttggt cggtctgccg tcgggatggg cggaagtgat
    14461 gcggctgaat tggtcgagct gtttgcgctc ttccctcaat gctgccgttt ttgcgtcttc
    14521 ttcatacaga agccgcgcct cggatgccgg gcggcgttgg tggttcaaac ctttaacctt
    14581 gattttatag ggaagggaat tgagcgtcag gtcgataata tcgccgatgt ctatggtttt
    14641 actgtttttg accttcgagc cgtttacttg aaccctaccc agttcgatgt gcttttgcgc
    14701 aagggaacgg gtcttgaaaa aacgtgccgc ccaaagccat ttgtccagcc gcatggcgga
    14761 agaatcgtgc ttgtctttca tacgattttg tttgaaataa ttgaatttgt ttcaagttta
    14821 gcataagata cgccgcctat aactagtata tatgcactaa tccactgttt tccatgctgt
    14881 ccgaacacaa aaagagggtg tggaaaagcc gttttggaca ataaattaac tgcggaatat
    14941 gcacaaatag cgtatgatag cggcagaatc tgttgatgag agcttcattc tatgaaacct
    15001 gtttttttgg attttgaaca acccatagcc gaactgacca acaaaatcga tgagctgcgt
    15061 ttcgtccaag acgagtctgc cgtcgatatt tcggacgaaa tacaccgttt gcagaaaaaa
    15121 agcaacgacc tgaccaaatc gattttcagc aaacttacgc ccgcccaggt ttcacaggtt
    15181 tcccggcatc cgcagcgtcc ctatactttg gattacattg atgcgctgtt tactgatttt
    15241 gaagagctgc acggcgaccg ccactttgcc gacgatcatg cgattgtcgg cggattggcg
    15301 cgtttcaacg gacaaagcgt gatggtcgtc gggcatcaga aagggcgcga caccaaagaa
    15361 aaaatccgcc gcaacttcgg tatgccccgt cctgaaggct accgcaaagc cctgcgcctg
    15421 atgaagacgg cagaaaaatt cggcttgccc gtcatgacct ttatcgatac gccgggcgcg
    15481 tatcccggca tcggcgcgga agaacgcggg cagtcggaag ccatcggcaa aaacctgtac
    15541 gaactgacgc gcctgcacgt ccccgttttg tgtaccgtca tcggcgaagg gggctcgggc
    15601 ggtgcgttgg cggtcgccgt aggcgattac gtcaatatgc tgcaatactc gacctattct
    15661 gttatctccc ccgaaggctg cgcttcgatt ttgtggaaaa ccgccgaaaa ggcggcggat
    15721 gcggctcagg ctttgggcat tactgctgac cgcctgcaaa agctggactt ggtcgatacc
    15781 gtcatcaaag aaccattggg cggcgcgcat cgggattttg ggcaaaccat gaaaaacgtg
    15841 aaagccgttt tggaaaaaca actgcacgaa gcgcaaagca tcccgcttgc cgatttgctt
    15901 tcgcgccgtt tcgaccgcat tatggcttac ggcaaatttt cggaacaata attcaggtag
    15961 aacaagcagc aagcagtttg tctgaaactg cttgcttttt ctttatcggg acggaaccgt
    16021 gctgacttta gatgcgtttg agcaatgctt gaaggattgt tttcctcaag gtctgaatgg
    16081 aaaaaaaaca gcggtggcat taagcggcgg cttggattcc gtcgttttgc tgcatctgct
    16141 tgtccgcgcc ggaaaaaagg gcggttttat tccggatgca ttgcatatcc atcacggctt
    16201 gagtccccgt gccgacgatt gggcagattt ctgccaaaac tattgcgata tgctcggggt
    16261 ggggctggaa acggttaagg tctgcgtgga aaaaaacggt ttgggcatcg aggcggcggc
    16321 gcggcaaaag cgttatgccg cgtttgccga aaaaggcttt gacgttttgg cgttggcgca
    16381 ccacagggac gatcaaatcg aaacctttat gctggcagtc gctcgcggcg gcggtttgcg
    16441 cgctttggcg gctatgccca ccgtccgccc ttttggggaa aaaggcatca tctggcggcc
    16501 tttgctgcct ttttcgcgcc aagacatatg ggattatgcc caaaaacacg gtttgccgaa
    16561 tatcgaggac gaaagcaata gcgatacggc ttatttgcga aaccgcttcc ggcaccgtat
    16621 tttgcccgaa ctttcggcgc agattcccca tttcgggcgg catgtactga acaatgtccg
    16681 cgctttgcag gaagatttgg ctttgttgga cgaaatcatc ggtcaggact gccgttgggt
    16741 ctgtgaggaa ggcagtttcg atacggtgcg ttggcaggcg ttttccccac gccggaaaac
    16801 ccatattttg cggtattttt tgaaggaaaa cggcatcccc atgccgaatc agaatgccct
    16861 tgccgacatt gcccgggttt tgacggaggc aaaaaccgga cgttggaact tgcaaggctt
    16921 tgaattgcat cattatgcag gcaggctgtt tgtgttccga ctggaaaaaa cggataaact
    16981 gcggtttttg aaagacaggc agataagcgg aaatttaagg gaaatattga cggggcaggg
    17041 atttgtttta aaacgtcatc cgtttgggct tcctgagcat cttttggagc aggacggaat
    17101 tttgaggacg gtagcggtat cggatacgtt ggctgtcggc ggcatccata aggatgtgaa
    17161 aaaaatcctt caggggaaac gggttttgcc tgtcctgcgc ccaatttggc cgcttgttgc
    17221 cgacagcgga aaccgtccat tggcgttggc aaactgttgt gcggattttc aaatctcggt
    17281 ttcagacggc attttgccct tccatcctga ctttcccatt ttattttgat aatatcgcaa
    17341 acagatttcg gcggcgttca gtcgggtatt gtccggttgc atatttctaa aaggcttgtg
    17401 aagtgagaca catcagttcg accaataatg aacacatccg gcacctgcac cgcctgttgt
    17461 cgcaaggaaa gttcagacgg caatacgccc aaaccgtttt ggagggcgtg cacctgcttc
    17521 aggttttcct gcaatccggc gggatgccgg tcggggtata tattcccgag ggcaaaatgc
    17581 cgtctgaaga aatccgcagg ctgagggcgg ttgtgccgga aggcaggatt ttttccgttt
    17641 cagacggcat attgaaaaaa atcagtagct tgagttgtgc agacgatata cttgcactga
    17701 ttgatatccc attgggcgga accttgccgg acaaaggcga ctgtgtggtt ttggacggcg
    17761 tgcaagatcc gggcaatgtc ggcaccgtct tacggagtgc ggcggcggca ggggtaggta
    17821 cggtcgtttt gggcaggggt tgcgcggacg cgtggtcgcc caaggtattg cgcgcgggga
    17881 tgggcgcgca tttcttgtcg ggcatttatc cgcaggcgga tttggaaata tggttggcgc
    17941 gctataaagg ccgtgtgttt gccaccgcct tgcgcgagga aaagcaggcg gttttgtacg
    18001 gcgaagattt gtgcggaccg acagcctggg tgtttggcaa cgaaggcgcg ggggtcggta
    18061 aagcggtttt ggacagggcg gacaagtgtg tcaggattcc gatgcacgat gcaaccgagt
    18121 ctttaaatgt cgcgatggcg gcgacaatct gcctgtttga acagatgcgg cagcggtcgg
    18181 cgtattgagg aaaagaaatg ccgtctgaaa aaatctatta cggcgtattg attttcttat
    18241 gtatcgcttc tatgctgctg tcgccgtttt tttatgcggg tgctttgaag cccaagaagg
    18301 cggcattgcg gaaggacggg cagtggaaac tcatcttatt gtccaatacc gtggcggcgg
    18361 cggttttggc ttgggtgtgg tggaaatggt tttgacagat attgctcaaa atcgtgctaa
    18421 tggaatccga acaaataaag aatttggtaa aaaatttgtt aaatcaacga attaaagttt
    18481 tgtggaaaac aaaacagctc taagcaaata gggcgtttgt cggtaaatac ggaagagttg
    18541 cggcattatc gggcatcttt aacaagtagt gccgtcttgg caggcaatcg gtttttatgg
    18601 gcagcttgca aaatcgcgga tataaaattg cgaatcggtt aaagtgtggg gacgctatga
    18661 aaaattgcga atttttttat gacccgacaa gggcaatcta tgatagcggt gcagattact
    18721 taactaggga aaaacataga ttagtcgtaa ttgcaaatag tgcttggggg ctattactta
    18781 atttatcttg ttattatgac gaggttttgg aaaagcggaa aataccgttc ggcaaacagg
    18841 aaattgatga cgatatggac aaagtgtccg cccttaagcg gaagtttaaa gatatttctg
    18901 aaatcaaagt aggggatggt tgggaatacc cgttcaatta tgagcaggga atgaaagaat
    18961 tagatgaagt gctattgaaa tacattccct tttttgaaga agaacgataa aggaggttga
    19021 tatgcgcgta tctaaaataa ttggaagtat gttgcttgtt acagcggttc agaccgtatt
    19081 ttcggcaaat gtttacgcgt gccgccataa tggtaaaacc agttacagcc aaactccggg
    19141 aaaacattgt accaacgcgg gtttggggcg ggaccgggtg tacagttcgg ttagaccggc
    19201 agtaaaagac agggcggaag acgcaggggt cggcgattat tcggacacgg tgagggacga
    19261 acacgtccaa aatccgagag agaatacgca taaggatgct tcgaataccg gtgcaaagac
    19321 gcattgattg aaaccgaatc agccatgacg gcgttgaata atagaatttg aacgattagg
    19381 gaactctgat gaaacacatc cacattatcg gtatcggcgg cacgtttatg ggtgggattg
    19441 ccgccattgc caaagaagca gggtttgaag tcagcggttg cgatgcgaag atgtatccgc
    19501 cgatgagcac ccagctcgaa gccttgggca taggcgtaca cgaaggcttc gacgcggcgc
    19561 agttggagga atttaaagcc gacgtttacg tcatcggcaa tgtcgccaag cgcgggatgg
    19621 atgtggttga ggcgattttg aaccgcgggc tgccttatat ttccggtccg caatggctgg
    19681 ctgaaaacgt gttgcaccat cattgggtac tcggcgtggc ggggacgcac ggcaaaacga
    19741 ccaccgcgtc tatgctcgcg tgggttttgg aatatgccgg actcgcgccg ggcttcctca
    19801 tcggcggcgt accggaaaat ttcggcgttt ccgcccgcct gccgcaaacg ccgcgtcaag
    19861 acccgaacag caaatcgccg tttttcgtca tcgaagccga cgaatacgac actgcctttt
    19921 tcgacaaacg ctccaaattc gtgcattacc gcccgcgtac cgccgtgttg aacaatctgg
    19981 aattcgacca cgccgacatc tttgccaact tgggtgcgat acagacccag ttccaccacc
    20041 ttgtacgcac cgtgccgtct gaaggcttaa tcgtctgcaa cggacagcag caaagcctgc
    20101 aagacacttt ggacaaaggc tgctggacgc cggtggaaaa attcggcacc gaacacggct
    20161 ggcaggtcgg cgaagtcaat gccgacggct cgttcgacgt attacttgac ggcaaaaaag
    20221 ccggacacgt cgcttggagt ttgatgggcg gacacaaccg catgaacgcg cttgccgtca
    20281 tcgccgccgc acgtcatgcc ggagtcgata ttcagaccgc ctgcgaagcc ttgagcgcgt
    20341 ttaaaaacgt caaacgccgc atggaaatta aaggtacggt aaacggcatc accgtttacg
    20401 acgatttcgc ccaccatccg accgccatcg aaaccaccat cgaaggcctt cgtcagcgcg
    20461 tcggaaacgc ccgcattctc gccgttctcg agccgcgttc caacaccatg aaactcggca
    20521 ccatgaaagc cgccctgccc gaaagcctca aaggtgccga ccaagtgttc tgctacgccg
    20581 gcggcgtgga ctggaacgtc gccgaagccc tcgcgccttt gggcggcaag ctgcacgtcg
    20641 gcaaagattt cgatgctttc attgccgaaa tcgtgaaaca taccgaagca ggcgaccata
    20701 ttttggtgat gagcaacggc ggtttcggcg gaatacacac caaactgctg gacgctttga
    20761 gatagcccgg gcgatgccgt ctgaaagccc ttcagacggc atcgtccggc tgcgcggcac
    20821 aaaggcggaa aaaccgtttg ccccgtattt tcaaacgcgt tacacttgcc gccgctgttt
    20881 tcagccattt gattacccgc aaccgccgtc attgcgccgg cggtttgcct gtcagcgtca
    20941 ttgcgccgct gtaaatacga aagaacacat tatgaccgta tcccccgtcg ccttgcgccg
    21001 taagaccgag tgcaagcctc atcccaccgc gcgctattgg aaaaaatgcg atgtcgaagc
    21061 cctgttcgga cttcccttcc tcgacctcat ttaccaagcc gccgaaatcc accgccaaaa
    21121 tttcaacccg cgcgaaatcc agctttccac gctgttgtcc atcaaaaccg gcggttgtcc
    21181 cgaagattgc gcctactgtc cgcaatcggc gcaccacaac accaatctgg gcaaagagca
    21241 gatgatggat gtggatgaaa tcgtcgaaaa agccaaaatc gccaaatcgc gcggcgcaag
    21301 ccggttttgt atgggcgcgg catggcgcgg ccccaaaccc aaagacgtgg agacggtttc
    21361 cgcaatcatc aaagccgtca agggcttggg tatggaaacc tgtggcacgt tcggtatgct
    21421 cgaagaaggt atggcggaag acttgaaaga ggcgggcttg gattattaca accacaacct
    21481 cgacaccgac cccgaccgct acaacgacat catccataca cgccggcatg aagaccgtat
    21541 ggacaccttg ggcaaagtcc gcaacgccgg tttgaaagtc tgctgcggcg gcatcgtcgg
    21601 gatgaacgaa acccgcgccg aacgcgcagg gctgattgcc agcctcgcca acctcgaccc
    21661 gcagcccgaa agcgtgccga ttaaccggtt ggtcaaagtg gaaggtacgc cgcttgccga
    21721 tgccgaggat ttggactgga cggaatttgt ccgcaccatc gccgtggcgc ggattacgat
    21781 gccgcaaagt tatgtccgac tgtcggcagg gcgcagcaat atgccggaag cgatgcaggc
    21841 gatgtgcttt atggcgggcg cgaactcgat tttttacggc gacaagctgc tgaccacggg
    21901 caatccggat gaagacggcg acagaatcct gatggaaaag ctcaacctgt atcccttaca
    21961 gtttgagctg gaaggcgagg tcgccgaagt ggaaaaagcc tctgggatta aagtggatta
    22021 ttgacgattg caaaaatgcc gtctgaaacc cgaaaaaagg ctttcagacg acatttgttc
    22081 ggacggtatt tccaatatct ttttaccggc gcgtgatgtt gccgtcgggc gagacatcca
    22141 gcccgttccc gttggggaag tcgctgcggt tcagataaat aatccgcccg ataacggttt
    22201 ttcagggtcg attttgggga ttttatcgtc ggcttgggta atagggatga tagttccgga
    22261 aataaattta ccctgtttgt cggtgataat tttgaaaatc ggcgcaatgc cgctgatgcc
    22321 ggaggtgttg attgcgccgt aggtggcaaa gttgccgccg ctgtaggaga tgaagcggtc
    22381 gcggtaaagt tcgacggcgc gagtaacgtg cgacccctgc ccgaatacga catccgcgcc
    22441 ggaatcgacg gcaagccgtg caaactcgac gacgttgccc ctgttttccc catagaagat
    22501 ttcggtatcg aacggcaggt gttccgcctg tttcccttcc gcgccaccgt ggaacatcac
    22561 aatgacgatg tcggctttct gtttggtttt ggtaatccgt tttctaactt tggcataatc
    22621 gttcagtttg acggcggcaa ggttgggggc gaaggagacg aagccggatc ttacgccgtt
    22681 tttcttcagg atggcggttt caaacctgtt ttcgatgccc gaatatttga tgttcaattc
    22741 gtcaaggttc gccctttatg ccgtttccgc accgcaaacc gccggggtca agccctcggc
    22801 gcatcctgcc ggaacggaat ccccgtgctg ccgattgacg gttcaaaccc cgcgcccgtt
    22861 tcaaataccg gcgatgtgga cggacaggat gcgcctgacg aaaagacagc cgataccgtt
    22921 tccattatcg gcgtgggcga cattatgctc ggcagcaatt atccggtcga ttacctgccc
    22981 gataccaata ttctgaaaaa cgtcgaatct gccttgcaag acgcggacat taccgtcggc
    23041 aacctcgaag gcacgctgtt tgacgaaggc ggtacgccga aaaaatgtgc aaacccccaa
    23101 aatatgctat gcattccgaa cgccctccgc atacgggcaa taccttgccg acgcgggatt
    23161 cgactacctc agcttcgcca acaaccacag caacgacttc ggcgcgcaag gcattacggc
    23221 aacggcggcg agcggcagct cttttacata ctcgatcgcg ctaaagccgc tgccgataac
    23281 gaggccaaaa ttgcggaaaa taccgccatc gcccagataa atttgtccat catcagacct
    23341 ttactgttca gacgagacag catttgccgc acgttttggg gcttatcttt cgatttgcgc
    23401 tacgtcgcgc accgcgcctt tgtcggcgga agtcgccatc gcgccgtaag ctcttaatgc
    23461 ggcggagacg tagcggtcgc ggttttccgg tttccacgct ttgctgccgc gtgcttccat
    23521 ttcggcacgg cgcgcggcaa gctcttcatc ggaaatgaca aggtggatgc tgcggttggg
    23581 gatgtcgatt tcgacggtat cgccttcgtg taccaaaccg atcgcgccac cttccgccgc
    23641 ttcgggcgag gcgtgtccga tggacaaacc tgatgtgccg ccggagaagc gtccgtcggt
    23701 taagagagcg caggctttgc cgaggccttt agatttcagg taggaagtcg gatacagcat
    23761 ttcctgcatg cccgggccgc ctttcgggcc ttcgtagcgg atgatgacga tgtcgccagc
    23821 gacgatttgg ttgcccaaaa tgccttcgac agcggcttcc tggctttcaa acacgcgcgc
    23881 gcggccggta aatttgagga tgctctcgtc cacgcctgcg gtttttacca cgcagccgcg
    23941 ttcggcgatg ttgccgaaca agaccgccaa accgccgtct tgcgagtagg cgtgtgccac
    24001 gtcgcggata cagccttttt cgcggtcgag gtcgagggtt ttccacatac ggttttgcga
    24061 gaacgcttgg gtggtgcgta cgccgccggg cgcggctttg aagcgttcga tggcgcgggt
    24121 gttttcaggg ttggttacgt cccatttttc aatcgcgtct ttcagcgtcg gtgcgtggat
    24181 agtgtgcacg tcggtgtgca gcttgcccgc tttgtccaat tctttcagga tggcgaagat
    24241 gccgccggct cggtgcacgt cttccatata gtagtcgtgg ttgttgggtg cggttttgca
    24301 gatgcagggc acaacgcggc ttaagcggtc aatgtcggcc attttgaaat cgacaccggc
    24361 ttcgttggca acggccaaca ggtgcaaaat ggtattggtg ctgccgccca tcgcaatatc
    24421 catcgtcata gcgttttcaa acgctttttt ggtggcaatg ttgcgcggca gtacggtttc
    24481 atcgttttgc tcgtaatagc gtttggtgat ttcgacaatc atacggccgg cttcgaggaa
    24541 caattctttg cggccggcgt gggtcgccaa atacgaaccg ttgccgggca gggaaaggcc
    24601 gagtgcttcg gtcaggcagt tcatcgagtt tgccgtaaac atacccgaac acgagccgca
    24661 ggtcgggcag gcgttttgtt cgacttcctc gacttgccgg ttgctgacat tgtcgtccgc
    24721 cgattcaatc atcgcgtcaa tcaagtccaa gcggcgttcg ggttggatgt ttgccacgcc
    24781 gatgactttg cctgcttcca tcgggccgcc ggaaacgaag atggtcggga tattcagacg
    24841 catcgcagca atcagcatgc ccggggtgat tttgtcgcag ttggaaatgc acaccagcgc
    24901 gtcggcgcag tgggcgttga ccatatattc gatggagtcg gcaatcaaat cgcggctggg
    24961 cagggagtag agcataccgc tgtgtcccat agcgatgccg tcgtcgatgg cgatggtgtt
    25021 gaattctttg gcgattgcgc cggctttttc gatctcgcgg gcaaccagtt ggcccatatt
    25081 gtgcaggtgg acgtggccgg gcacgaattg ggtgaaggag ttggcaacgg cgatgatggg
    25141 cttgccgaag tcggtttcca tcacgccggt ggcgcgccac aatgcgcgtg cacccgccat
    25201 attgcgaccg tgggtggagg ttttggagcg gtagtccggc atagtgtgtt tccttgtctg
    25261 ctatgccgtc tgaacggcaa aaggctttca gacggcattt ttgttgtgtt ttgaaatgaa
    25321 aaaaaaggta ttttatacca agtatcggaa ttttgcggaa tggaaacgcg tgcggcaaaa
    25381 aaggacatcc cccgcaggaa tgcgggggac ggtttcaggc gcgcgcaatc gggacggctt
    25441 tggatgcgtc ccaaaaatcg acgggcgcat ccaacacggg tttgacgatg cccgtccgta
    25501 tggcgaaatc gccgaaacct tcgtcggtat cgcgtcctgc cgcccatttg ccgatcaggt
    25561 cgtctaattc ggaaaggatt tccggcaggg taatgttttc tttgtagagg cgggggatgc
    25621 gtacgccttc gcggtcgccg ccgatgtgga ggttgtagcg tccgacggct ttgccgacca
    25681 gtccgatttc cgccaacatc gcccgtccgc agccgttcgg gcagccggta atgcgggtaa
    25741 cgatgtagtc gtccgacgtg ccgtgtttcg ccataatctt atccagctcg ccgatgaagt
    25801 ccggcagcac gcgttcggct tccgccattg ccagcgggca ggtcgggaag gaaacgcacg
    25861 acatcgcatt ttcgcgcagt ttgctgacac cgtcgtgtat cagcccgtat gagcgggcga
    25921 gctgttcgat ccgggctttg cctccttcgg gtacatttgc cacgatgagg ttttggttgg
    25981 cggtgatgcg gaagtcgcct ttgtggattt tggcgatttc caacacgccg gtcagaagct
    26041 gtttcccgcc ttcgtcaacc aaacgcccgc tttcgatgaa aagggtcaaa tgccagttgc
    26101 cgtctatgcc tttcacccag ccgatacggt cgccgcgccc ggtaaatttg aacgggcgta
    26161 cgggttcgaa cggcataccc atacggcgtt cgacttcggc gcggaagttg tccaagccca
    26221 tattttgaat ggtgtagcgg gtgcgggcgt ttttgcggtc gctgcggttg ccgaagtcgc
    26281 gctgcgtggt taccaccgct tcggcggcct tcagcgcgtg ttccggaggc acgaaaccca
    26341 gttccagtga aatgttcgga taggttttgg tgttgccgtg ttccatcgaa agcccgccgc
    26401 ccgccaaaac attgaatccg gcaagctgtc cgttgccgtc tgaaatggcg acaaaatcca
    26461 agtcgttgcc gtagcagtcc acatcattta agggcgggat gacgactgcg gttttgaatt
    26521 tgcgcggcag ataggttttg cccaaaatcg gctcgtcttc ttgaaggaag tcgtcagaac
    26581 tttgaacttt tttgccgtcc acccacacat ccagataacc gcgcgtgcgc ggcagcaagt
    26641 gttcggaaat ctttttcgcg tattcgtaag cctgccggtg cagttcggac tcgatcgggt
    26701 tggacgtgca aagcacgttg cggttcatat ccgccgccgt ggcgatggaa tccaaaccca
    26761 gtttgtgcaa gaggcggtgc atcgtctgca acttggcttt cggcacgccg tgaaattgga
    26821 aggtttgccg gttggtcagc cggatggagc ggtaatgact gttttcccgg gcaaatttgt
    26881 ccagttctat ccattgggac ggtttgatga tcccgcccgg cagccggcag cgcaaaagca
    26941 taaatttcaa gggctcgagt tttgcctcgg cgcgttcggc gcggatgtcg cggtcgtcct
    27001 gctcatacat accgtggaag cggatgagtt ggaagttgtc gcctttgaag ccgcccgtga
    27061 gcgggtcttt caaatcgtcc aaaatcgtgc cgcgtaaaaa attgctttcg gttttcagac
    27121 gttcgttgtc ggatagcggt ttttcttgcc acgccaaacc ttttgtcttg gtctgtacgg
    27181 tcattttgtg ttcctcccga ttatatttaa tcaataaaca tcacgctgat agcgtttttc
    27241 ttcgcgcagc atatccaaat attcttctgc gccctcttcg tccaaatgtc ctgccccgat
    27301 aatcacatcc agcaaggcgg cttccacgtc ttttgccatt tttgccgcat cgccgcacac
    27361 atagatatgc gcgccttcct gcagccattg ccaaagtcct tccgcctgtt cgcggatttt
    27421 gtcctgcaca tagatttttt cttcctgatc gcgcgaccag gcgaaatcgt atctgtgcag
    27481 gaagccgtct ttggcaaact gctgccattc ggtctgatag aggaagtcgg cggcaaaatg
    27541 cggattgccg aaaatcagcc agtttttgcc ttccgcattt tctgcggcac gttgttggac
    27601 gaaagcgcgg aacggtgcga cgccggtgcc cgagccgatc atcacaatcg gcttgcggct
    27661 gtcttcgggc agcctgaagc cgtcgttgcg ttccacaaac acgcgcaccg tgccgtcctc
    27721 ttccagccgg tcggcaagga aacccgatgc gccgcccgct ctggcgcgcc cttcgtgttc
    27781 aaaacgcacc gcgccgacgg tcaggtgcac ttcgtccccc acttccgcct gcgacgagga
    27841 aatcgaatac aggcgcggcg caagcgggcg cagcaggccg gcgaattgtt ccgccgtcag
    27901 ttttgcaggg aagcggtgca gcacatcggc aatcggcgtg ctttgcacaa agccttgcaa
    27961 aacggcgttg tcggcagcaa tacggtcgag ttcgtcatca tcggcgaacg gggcatagcc
    28021 tttgacaaag gcgggggtgt tttgcgtgag ttcaaaatgg gataacagtg cggaggcaac
    28081 cggcagggtt tttccgcccg cctgtatttc cgttgcctga tcgatgccga gcaggtctag
    28141 gatttccctg accagtgccg gatcgttgtc aaaccaaacg ccgagcgcgt cgcccgggag
    28201 gtagtgcaaa tccgaaccgc tcaaatcgat ttcgatgtgg cgcacgtctt tatcggattg
    28261 gcgggcggtg attttctgat tggccagcag ggcggcggga aagggggctg ccttgcagta
    28321 cctgccctcc gatgccgtct gaaggtcggc ggggggcgtt gcctgcggcg cgggcgttgc
    28381 ccggtttttt gcggcttctt cttttaagag tgcggcgata ttgtctgtcc aggcgtttgc
    28441 ggaggcggta aagtccaaat ccgcatcaac gcgttcgagc aggcgtttcg cccccaattc
    28501 ttcaaaacgt ttgtcgaaat ctttgcccgc ccggcagaaa ttcggatagg aactgtcgcc
    28561 caaacccagt acggcaaatt ggagtttgtc caatttcggg gcttttttgc cgttcagcag
    28621 tttgtgcagc acgacggctt cttccggcgg ttcgccttcg ccttgggtgg acgtaaccag
    28681 cagcaggcgg cgttcgccgg cgatgttttt cgccttatag tctttcagtt cggcgcgact
    28741 gacttggatg ccggcggctt ccaggctgtc cgccgctttg tcggcaacgg atttcgcatt
    28801 gccggtttgc gaggcggaaa ggacggttac ggaaaaaggt tctgccgtcg gcaatgccgt
    28861 ctgaagcgcg ggcagtcctg cagatgcccc gtttcctgct tttgcccaag cgtagccgga
    28921 cagccacgcc cattgtgccg cgtccagccc cgacaggagc tgcgtgattt cgggcggcag
    28981 aggcggtaat ggcggatttg tgttctgcat atcgtgttca ctcataaaat catacctgcc
    29041 gcaacagtgc cgtatgtcgc ttcgtctatc aggataaacg aaccggcggc ggtgttttcc
    29101 gcataaggcg ttgccgtaac gggtttttga aggttgatgc ggactttggc gatgtcgttc
    29161 atcttcaagg attccgcgcc ggcctcttgt tccagcgtgc ggacatccaa aacgctttca
    29221 atttccccga cttttgccga cacggtttgc gtgccgtgct tgagcaggta tttgcgcgcg
    29281 gtgttgagcg gacgttcgtc aaaccagcaa agcgtgactt ccagatgttt ttgcggggcg
    29341 agcggggaat ttttatcgac aaaaaggtcg ccgcgcgaaa catcgatgtc gcgatccagc
    29401 cggagggttg ccgcctcgcc ggcaaaagcc tgcgccactt cgcctttggg tgtgatgatt
    29461 tcggacactt cggcggtcag cccgttcggt tcgatgcgga cggtttgccc gacggcgacc
    29521 gaaccgcgtt cgatgcgccc ctgatagcct cggaaatcat cggccttgtc ggcatcttgg
    29581 cggacgacca gttgcacggg gaaataaaaa tcgtcggcgg tgcggctgac ttcgtccgcc
    29641 cccggcaggg tttccaaaat ggacaataag ggttcgcctt tataccaagg catattgccg
    29701 ccggggtaaa caatgttgtc gcccaagagt gcggacaccg gtacgaaatg cgcgtctttc
    29761 aaaccgagct gttcggcaag tcggcggtat gcctccacaa tggcgttgaa tttgtcttcg
    29821 ctgtaatcca gcaggtccat tttgttgacc gccaccacaa tatgcgggca gttgagttgg
    29881 cggaggatgg cggaatggcg tttggtctgc ggcagaagct gcaagggctg cgcgccgaaa
    29941 tccagttggg atgcgtcaac cagcacgact gccgccgaag cggtgcttgc gcccgtaacc
    30001 atattgcgcg tgtattgttc gtgccccggc gtgtcggcga tgatgaattt ccgtttcgcc
    30061 gtggaaaaat agcggtatgc cacatcgatc gtaatgccct gttcgcgttc ggcttccagt
    30121 ccgtcggtca ggatggagaa gtctatggtt tctttcaaac ctttgctttt gccggattcc
    30181 aaggttttga tttggtcgga cagcagggct ttgctgtcgt agagcagtcg tccgattagg
    30241 gtgcttttgc cgtcatcgac gctgccggcg gtaatgaagc ggagcggggt ttggtgttgt
    30301 gccgtcatat tttcttcctc atatctgctt aaagggtttt tgaaatttag aaatagcctt
    30361 cttttttgcg tttttccatt gccgcctcgc ttgcctgatc gtccagccgg gtcgcgctgc
    30421 gttcggaaat gtcggcaacc gctgtttctc tgataatctc cgtcggcgtg gacgcggtgc
    30481 tttctaccgg gcaggtgcag ctgatgtcgc cgacggtgcg gaagcggaca tcaaggattt
    30541 cggaggtttc agacggcatt ttcggggtga gcggcgttac agggaccagc agccccctgc
    30601 gtctgaccac ttcgcgcctg tggctgtaat aaatcggcgg cagctcgagg ttttcgcggg
    30661 cgatgtattg ccagatgtcg agttccgtcc agttggaaat cgggaagacg cgcatatttt
    30721 cgcctttgtg cagcctggtg ttgtacagcg accacagctc ggggcgttgc gccttcggat
    30781 cccattgtcc gaactcgtct cggaacgaga aaatccgttc tttggcgcgg gctttttctt
    30841 cgtcgcgccg cgcgccgccc atcagcgcgt caaagccgtt tgcctcgatg gtttccaaca
    30901 gcgtaaccgc ctgcgccgca ttgcgcgaat cggtttcttt gcgtaaaact actgtgcctt
    30961 tggcaatgga gtcttccacg cgccccacta tcaggcgggc attgagtttt gccgcctgcg
    31021 cgtcgcggaa agcaatcact tcggggtagt tgtgccccgt gtcgatatgc accagcggga
    31081 agggcagttt taccggcctg ctgcccagcc ggaaggcttt gcaggcgagg gcgagcagga
    31141 ccacggaatc tttgccgccg gaaaagagca gggcggggtt ttcgcattcc gccgccactt
    31201 cgcggatgat gtggatggat tcggattcca accagtcgag ttgggcgttg ttcggttcgg
    31261 ttttcgtcat accatattcc ttatttcttc tgtctgatat ttatgaatta tttgtgcagc
    31321 ccgcattctt tgctgtttct gccttcccac caccaccgcc cggcgcggat gtcttcgccc
    31381 gccttgacgg ggcgggtgca ggggtcgcag cctatgctgg gaaatccttg ccggtacaaa
    31441 tcgttgtaag gcacattgtt ggcgaggatg tatgcccaca cgtcgtgttc cgaccagtcg
    31501 aaaatcgggt tgtatttgcc gatgccccgt ccggcatcgt attcggcaaa cggcagttcc
    31561 gtgcgtgtgg cggattgttc gcggcgttgc ccggtaagcc aggcgtccgc gcctgcaatg
    31621 gcgcggttga gcggttcgat ttttcggatg cggcagcatt cgcggcgcgc ttcaacgctg
    31681 tcgtaaaagg caaacctgcc tttgctttcc acataacggt cggcatcttc tcgaaccggc
    31741 cggaaacgct ttatccgcaa atggggatat gcgcgtccga gcctgtccag caggtttagg
    31801 gtttccgtgt ggagcagccc cgtatccaag gtaaaaatgc cgatattgag gttttcgccg
    31861 gcgataaggt cggtaatcac catatcttcc gcagcaaggc tgctggcaaa ccgtgcatcc
    31921 cggtggctgc cggcaatccg gtgcaggcgt tgtttgaggg tttccgtttt ttccgccaaa
    31981 gctgtttcac tgccattttc aatcggcgga attttccata aagcaggttt gaaaattttc
    32041 attttgtccg ccttgcttta tgcggcttgt tgttcttgtc cggtgcccag tccgtccaat
    32101 gcaaaatacg cgtgttcggc cggattgctt tcttttttgg cgttttcgcc gaaccaagcc
    32161 agtttttcgt gcagttccac cacttcgcct acaacaatta aagccggctt cggcgcgttt
    32221 tcggcgaggc gggcgaggtt ggcgagcgtg ccgattgccg ttgattgcgt tgattgcgtg
    32281 ccgtggctga tgacggcggc aggcgtgtcg ggcgggcggc cgtattgttg cagccgttcg
    32341 gcaatcagcg cggctttgag cgtgcccata taaatcacca aggtttggcg gctgcgggca
    32401 agcgtctgcc attcgatatc gggcgcatcc gccttgcggt ggccggtaac gaaaaccgca
    32461 ctttgggcat aatcgcggtg cgtgagcggg atgccggcat aggcggtcgc gccgacggcg
    32521 gcggtaatgc cggggacgac cgaaaacgga atgtggtggc gcgccagcac ttccaattct
    32581 tcgccgccgc gtccgaacac gaaagggtct ccgcctttca aacgcaccac gcgcctgcct
    32641 tcgcgggcca gcctgaccat aagcgcattg gtgtcctctt gcggggtgcg gtcgccccgg
    32701 gcgcgcttgc cgacaaaaat ccgttccgca tcgcggcgga cgagggacag tatgccgtct
    32761 gaaaccagcg cgtcgtaaag caccacgtct gcctgctgga tttcctgcag ccctttgagc
    32821 gtcagcagcc ccgcatcgcc gggacccgcg ccgaccagcg agacggagcc gccttgatca
    32881 ttttgacgac tttgttccaa ttggcctgcc aattcccgtt cggcaagggt gttttgccgg
    32941 tttttgacga gggctgcgaa acgtccgtta aactgctttt cccaaaagcg gcggcgttcg
    33001 gtaacggatt tcagtttgcc cttgaccgca tcgcgccatc ttccggagat ttccgccata
    33061 tcgcccaaag acggcggcag cagggcttcc agcctttcac gcagcaggcg ggcgaggacg
    33121 ggcgcgctgc cggagctgga aacggcaatc tgaaccgggt tgcggtcgat aaccgacggg
    33181 aagatgaagc tgcaatggtc gcggtcgtcc accacgttga ccggcttttg gcagctttcg
    33241 gcaagatgga aaacgcgccg gttgagggct tggtcgctgc ttgccgcaat gatgaggaaa
    33301 actgtgcgga tgtgttcggc acgaaattct tcggcaagcc acaggatttt gttttccgcc
    33361 gccaacgcgg agagttcggc attcaggtgt tttgcggcaa ccctgacctc tgcgcccgcc
    33421 ttcagcagca ggctgatttt gcgtgcggcg accgcgccgc cgcctacgac caatacgggg
    33481 cggccggcga ggttggcgaa aatagggaaa taattcactg gctgactcct ttgctgtttg
    33541 cccgcacctt gtttccgata cggtgcgtcg cggcattttt gtcggaatgc gggtcatttt
    33601 agacaaaagg attttcccgg ttaaataata aaaaggcatt tgttagaagc tgaaagctat
    33661 atgagggcgg ctgcggatac ggcggttt
//
LOCUS       DAWKJW010000006        30605 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.006, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000006 DAWKJW010000000
VERSION     DAWKJW010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 30605)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30605)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30605
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.006"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            1..111
                     /locus_tag="WJJ54_000228"
                     /pseudo
     CDS             1..111
                     /locus_tag="WJJ54_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            517..1572
                     /locus_tag="WJJ54_000229"
     CDS             517..1572
                     /locus_tag="WJJ54_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEZ7341147.1"
                     /translation="MKNSKLKAVDFFCGGGGMSYGMQSAGIQVLAGIDYEPSCKETYE
                     ANINAKFIQADVFELQPETLEKELGLKKNDDDLILIGCSPCQYWSVIQTDKRKSEKSK
                     SLLLEFQRFVEYFNPGYVVVENVPGILSRMKESRLDNFIKLLEEKGFTVHFGIHNTAD
                     YGIPQSRKRFTLIANRITKEKLEPVKYSGKRLTVRDVLGMENGFPKIIAGHQDETDFM
                     HSCAGLSDINLKRLALIPKNGGNRLAFAHIPELQLECFIGKDNSFKDTFGRLWWDKPA
                     PTITTKFFSISNGRFAHPEEDRALSLREGATLQSFPRNYVFKAGSRDKIARLIGNAVP
                     PMYAEKIGRAIVDNIEC"
     gene            1586..3232
                     /locus_tag="WJJ54_000230"
     CDS             1586..3232
                     /locus_tag="WJJ54_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02391 family protein"
                     /protein_id="HEZ7341148.1"
                     /translation="MSEEKLKMSFEPTVIEHLGVKMYSHTVPAIAELIANAYDACATE
                     VEVRLFDKPEHKIVIKDNGIGMSFDEINDFYLRIGRNRREEKQASPCGRIPTGKKGLG
                     KLALFGLGNKIEISTIQGNERVTFTLDYAEIRRSKGIYQPEFRKESVESNIESGTTIT
                     LTELTKKQGYPLDNYVEHLSRLFDFPAQDFKIKVSLNGSEPKIIDGNLKYDLVTPQFE
                     WEYQDLATNISSLSSKFEQYEYSGLIQGKFITTEKPLKNNMKGITLFANGRMVNMPEF
                     FTDSESSHFYSYLTGWLNVDFIDNDDEDLIATDRTSLDWKHSKTSKLRVFLGEIVRAI
                     GQDWRKRRKKEKDDEVKGESGVDIEDWKNKLPKKEREPVEVILNRLEDSELTNKEQAE
                     VISALHSIIPEYPYYHWRHLHQDLHTACNDFYNEKKDYLSAAIEAVKVFEDKVQKQTG
                     LHSIDGRELIEQAFGSKNSILLLTNNKTKAEQNLEDGLEQLACGTWTGFRNPVQHELR
                     ANLSPSIFNDKDALDLISLVSYLLRKVEQTKKRSKVVSSK"
     gene            3236..3658
                     /locus_tag="WJJ54_000231"
     CDS             3236..3658
                     /locus_tag="WJJ54_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HEZ7341149.1"
                     /translation="MTDIFTTSKRSFVMSKIHSKETKPEILVRKFLFSQGFRYRKNDK
                     RYAGKPDIVLPKYKTVVFIHGCFWYGHSCNKGHIPKSNTDFWLEKITKNCERDIKNET
                     ELEKIGFKVIVVWECELKNKAIGRERLNRLVREIKDAV"
     gene            complement(3681..6923)
                     /locus_tag="WJJ54_000232"
     CDS             complement(3681..6923)
                     /locus_tag="WJJ54_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HEZ7341150.1"
                     /translation="MQNMKNQVRGSGMDARSNPANVSDGLQNSSGHIGTNTRYRLTKL
                     GEQMARLPIDPKIARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHER
                     FTDKQSDFLAYLNIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMCEWRELHHQLAQT
                     AIEMGLTTKETAFRRPPEIRQLTSSENAGDQDLSAKLKQKQLDKKQHRAQIRAAKEAG
                     YEQIHRALLTGLIANVGMKSPDGNDYTGARGSRFHLFPASALFKAKPKWVMAAELVET
                     TKLYARDVAVIQPEWIEQEAPHLVRYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRP
                     VSYGKVAPEEAREIFIRSALVAQECDLKADFFVHNKKLIKEITELEHKSRKQDVLVDD
                     EALFAFYNERLPEMAWKDAQGSVWGSEDSVRIIESDKAERSSENERNEFRKNKRNGSR
                     QNENHGNTVGWVENPTSAATAKTVGFDNPTYATQQPTPSPAREGRGEGKTVAAQTNFS
                     ATAANPLPQEREQSASASTFSDDLRPANLQQTAPSPVGEGWGEGKTVATQTNFSATST
                     LSDDPKPKKQPAPPKGRLKPLPLADIRTFQAWIKTAERDNLRLLFLSRDDLMQHAAAH
                     ITEEQFPKFWQTADGKFKLSYRFEPHHPLDGVTLTLPLTVLNRLHAPSLEWLVPGMLR
                     EKIQLLIKALPKQIRRICVPVPDFITQFLSQNPDRNAPILPQLAQAIAKTAGDIRILE
                     QINQDEWAAFRLPEHCYFNLRIIDDGGQELAGGRKLHELQQQLGQAAAVTFRDNTQEF
                     ERDNVTTWDIGTLPESIKFARGKQQLTGYLGLQKEKDGRIALRLFDTSPAAEQAHRLG
                     VIELMKLQLKEQVKYLNKGIQGFTQAAMLLKHINADTLCDDLTQAVCDRAFIGEDELP
                     RNEKAFKEQIKRARSRLPAVKEALSRYLQETAAVYAELNSKLGKHPLTHLLRLRLQTL
                     LAAGFATRTPWAQWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQELEQMWQEKTDS
                     LIKQGLPISDGLAAFKWMIEELRVSLFAQELKTPYPVSVKRLLKMWEDLN"
     gene            complement(6989..8566)
                     /gene="lpt3"
                     /locus_tag="WJJ54_000233"
     CDS             complement(6989..8566)
                     /gene="lpt3"
                     /locus_tag="WJJ54_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase"
                     /protein_id="HEZ7341151.1"
                     /translation="MMKKSLFVLFLYSSLLTASEIAYRFVFGIETLPAAKMAETFALT
                     FVIAALYLFARYKATRLLIAVFFAFSIIANNVHYAVYQSWMTGINYWLMLKEITEVGG
                     AGASMLDKLWLPALWGMLEVMLFCSLAKFRRKTHFSADILFAFLMLMIFVRSFDTKQE
                     HGISPKPTYSRIKANYFSFGYFVGRVLPYQLFDLSKIPVFKQSAPSKIGQGSVQNIVL
                     IMGESESAAHLKLFGYGRETSPFLTQLSQADFKPIVKQSYSAGFMTAVSLPSFFNVIP
                     HANGLEQISGGDTNMFRLAKEQGYETYFYSAQAENQMAILNLIGKKWIDHLIQPTQLG
                     YGNGDNMPDEKLLPLFDKINLQQGRHFIVLHQRGSHAPYGALLQPQDKVFGEADIVDK
                     YDNTIHKTDQMIQTVFEQLQKQPDGNWLFAYTSDHGQYVRQDIYNQGTVQPDSYLVPL
                     VLYSPDKAVQQAANQAFAPCEIAFHQQLSTFLIHTLGYDMPVSGCREGSVTGNLITGD
                     AGSLSIRDGKAEYVYPQ"
     gene            complement(8744..9871)
                     /locus_tag="WJJ54_000234"
     CDS             complement(8744..9871)
                     /locus_tag="WJJ54_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341152.1"
                     /translation="MKHLLIDFENVQPQNLDKLLTENTHIWLFIGVLHKMLPISLVQS
                     LLRFGERVHLVQLQKTGKNALDFYLSYYLGQITATDPNAQIGILSRDGGYDVLVEHIL
                     KNHQAKGIVRLANIDEVQHQKITTEPPSALLENTPQPETTLKPQQPLTSYFQAALTAL
                     RRPDAFRPCRLHNLRQNLRKHILSDLFKEKTDEECEITTANVINKLKAQNFISIDEQE
                     TVSYHLSDNDLLQRIQRHILSQRPKTYADFQAVVQNRADALHLTVGTNDIQSFARHLR
                     DQNLIRQNNGKIEYAPFTEPKPQPTPKQPKKTAWEPDEIIWKKVIAALSLKNRPNKTK
                     TLRNTIQALTKSNAQETDKLLQHLQDTQVLRIDGTKIVYIK"
     gene            complement(9972..11363)
                     /gene="hrpA"
                     /locus_tag="WJJ54_000235"
     CDS             complement(9972..11363)
                     /gene="hrpA"
                     /locus_tag="WJJ54_000235"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HEZ7341153.1"
                     /translation="MFPDLSQTLSKDRHFLRSAFKNPNKYGGLSKVEEKYRKSHEIFL
                     KRLAASPKPEFDNTLPVHEKLEEIKKAIAEHQVTIICGETGSGKTTQLPKICLELGRG
                     AAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGIL
                     LAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAER
                     FSQHFNGAPVLEVSGRTYPVEILYRPLTGKDEDDAEVELTDAIVDAADELARHGEGDI
                     LVFLPGEREIREAAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPSGAKRRIVLATN
                     VAETSLTVPGIKYVIDTGLARVKRYSARAKVEQLHIEKISQAAARQRSGRCGRVSAGV
                     CIRLFSEEDFNNRPEFTDPEIARSNLAAVILRMASLKLGDVAAFPFLEMPDSRYINDG
                     FQVLLELGAVEAA"
     gene            complement(11552..12961)
                     /locus_tag="WJJ54_000236"
     CDS             complement(11552..12961)
                     /locus_tag="WJJ54_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEZ7341154.1"
                     /translation="MTSTFPRRLARKIRQTRRLSRKSIAFLFLLAGSALVALTALFFA
                     HLADFALELNAKLVQQYPWFAWVALPLGLPLIAWLTRKFAPFTAGSGIPQVIASLSLP
                     YGAQKTRLIRLGQTLLKIPLTFLGMLFGASIGREGPSVQVGAAVMGAWGAWCKKHGLA
                     FKGMQENDLMAAGAAGGLAAAFNAPLAGVIFAIEELGRGIMLRWERQILLGVLASGFI
                     QVAIQGNNPYFSGFNGGVLEHIFLWVALSGLVCGAAGGLFGRLLYRGAAAFAPRKIRG
                     FIRNRPLLLAALMGLLLALLGTFYQGKTYGTGYHEAAQALHGIYEAPFGLAAAKWLAT
                     VFSYWAGVPGGIFTPSLTIGAVLGEHIAAIADISQGANIIVLICMAAFLAGATQSPIT
                     SAVVVMEMTGGQSLLFWMLIACIFASQVSRQFSPRPFYHASGMRFRQRVLQETAAQTG
                     NAPARPQTANSKTGMPSEN"
     gene            complement(13021..14241)
                     /gene="argJ"
                     /locus_tag="WJJ54_000237"
     CDS             complement(13021..14241)
                     /gene="argJ"
                     /locus_tag="WJJ54_000237"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HEZ7341155.1"
                     /translation="MAVNLTEKTAEQLPDIDGIALYTAQAGVKKPGHTDLTLIAVAAG
                     STVGAVFTTNRFCAAPVHIAKSHLFDEDGVRALIINTGNANAGTGAQGRIDALAVCAA
                     AARQIGCKPNQVLPFSTGVILEPLPADKIIAALPKMQPAFWNEAARAIMTTDTVPKAA
                     SREGKVGDKHTVRATGIAKGSGMIHPNMATMLGFIATDAKVSQPVLQLMAQEIADETF
                     NTITVDGDTSTNDSFVIIATGKNSQSEIDNIADPRYAQLKELLCSLALELAQAIVRDG
                     EGATKFITVRVENAKTRDEARQAAYAVARSPLVKTAFFASDPNLGRLLAAIGYAGVAD
                     LDTDLVEMYLDDILVAEHGGRAASYTEAQGQAVMSKAEITVRIKLHRGQAAATVYTCD
                     LSHGYVSINADYRS"
     gene            complement(14308..15000)
                     /locus_tag="WJJ54_000238"
     CDS             complement(14308..15000)
                     /locus_tag="WJJ54_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HEZ7341156.1"
                     /translation="MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVL
                     IAYLKILGIDYAVYHNAAQFIDFWLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGS
                     ITGIVTGMYFAKWLCAEREVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
                     GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTA
                     LIAPLLIPVLGF"
     gene            complement(15000..15344)
                     /locus_tag="WJJ54_000239"
     CDS             complement(15000..15344)
                     /locus_tag="WJJ54_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HEZ7341157.1"
                     /translation="MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQA
                     GWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLV
                     TGKVHRWIRSII"
     gene            complement(15489..15707)
                     /locus_tag="WJJ54_000240"
     CDS             complement(15489..15707)
                     /locus_tag="WJJ54_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341158.1"
                     /translation="MSMPEMPKWYDDDGQIVSCTEKIKVMSENMAELYQTAQDAFEDA
                     LLMGCGERQLRDYLLALIEGLENPYRKV"
     gene            complement(15726..16481)
                     /locus_tag="WJJ54_000241"
     CDS             complement(15726..16481)
                     /locus_tag="WJJ54_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEZ7341159.1"
                     /translation="MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAED
                     EQPVLPINRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMGLN
                     EQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSGFMQHIFKRAM
                     GINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTG
                     KNIEITSLSHKYWSGKYAFARRVKKNDPSRFLN"
     gene            16726..17634
                     /gene="hslO"
                     /locus_tag="WJJ54_000242"
     CDS             16726..17634
                     /gene="hslO"
                     /locus_tag="WJJ54_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEZ7341160.1"
                     /translation="MNQTAINRADVRTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPA
                     AIRRALGELLAAGVLLSGNLKNEGTLIVQVQGRGRLKMLVAEAASDRTVRATARWDET
                     AEIADDESLGDLLGEGGVFVLTLQPKDGEPWQGVVPLEGGGIAQMLANYMKRSEQIDT
                     HIVLSASDEAAGGLLVQRLPEAVLDEEAWEHVSTLARTLTADELAELDAQHVLYRLFH
                     ETPPRVFEPETFEFSCTCSRGKVSDMLLMLGGEEVGGVVVEQGSIEVDCDFCHSKYVF
                     DETDVNALFGEDVVGVAKGLPRHTVQ"
     gene            complement(17720..19174)
                     /gene="mgtE"
                     /locus_tag="WJJ54_000243"
     CDS             complement(17720..19174)
                     /gene="mgtE"
                     /locus_tag="WJJ54_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEZ7341161.1"
                     /translation="MSIEPTPPNLENDGIENDVERVSADFDRVHSLCEILEPAFEQIE
                     NGTPLEDAPLRDKLTELTVLLSELHPADVAAVLESLPPRERNIVWILVKPEDDGEVLL
                     EVSDAVRETLIESMDKDELLAAVDDLDADELAELADDLPHQVVYEALQTRDEEERAQV
                     KAAMSYEDNQVGAIMDFELVSIRADVACEVVLRYLRRFDSLPDHTDKIFVVDENDVLQ
                     GVLPIRKLLVADPEDLVENVMAKDVVRFRAEDDVEEAAQAFERYDLVTAPVVDENKKL
                     IGRITVDEMVDVIREESEADMLNMAGLQEEEDLFAPVWDSVKNRWMWLAVNLCTAFLA
                     SRVIGAFEGSIEKIVALAALMPIVAGIGGNSGNQTITMIVRAMAMGQLTGMQAGRLLK
                     KEVGVALVNGIIWGTVMGAVSWLLYGSLGIGLVMIAAMTLNLLLAATVGVLIPVVMEK
                     FGRDPALGSSVLITAVTDSGGFLIFLGLATLFLL"
     gene            complement(19406..23898)
                     /gene="mspA"
                     /locus_tag="WJJ54_000244"
                     /gene_synonym="ausI"
                     /pseudo
     CDS             complement(19406..23898)
                     /gene="mspA"
                     /locus_tag="WJJ54_000244"
                     /gene_synonym="ausI"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242022.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin/serine protease MspA"
     gene            complement(24212..24970)
                     /gene="gloB"
                     /locus_tag="WJJ54_000245"
     CDS             complement(24212..24970)
                     /gene="gloB"
                     /locus_tag="WJJ54_000245"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HEZ7341162.1"
                     /translation="MKITPVKALTDNYIWMIQHGNHAVCVDPSEPSPVLEFLVRNRLM
                     LAQTWVTHPHPDHEGGAAALWRGYMESPVYGESDIEAATHTVTAGTQFTFGEGLITVW
                     ATPGHTDRHISYLMETSDGIHVFCGDTLFSAGCGRVFTGTIEQLYDSFQRFNRLPENT
                     LFYPAHEYTAANLDFAAHIEPDNADIQTALKAAAHTPTLPVTLAHERRVNPFLRVDLP
                     HVRDRAEALSGKTLNSSLDTFVALRELKNQYRTK"
     gene            complement(25065..29027)
                     /gene="purL"
                     /locus_tag="WJJ54_000246"
     CDS             complement(25065..29027)
                     /gene="purL"
                     /locus_tag="WJJ54_000246"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HEZ7341163.1"
                     /translation="MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLSSEFWYFAG
                     SEKALDAATVEKLQALLAAQSVEQTPKAREGLHLFLVTPRLGTISPWASKATNIAENC
                     GLAGIERIERGMAVWLEGRLNDDEKQQWAALLHDRMTESVLPDFQTASKLFHHLESET
                     FSTVDVLGGGKEALVKANTEMGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSE
                     HCRHKIFNADFILNGEKQPKSLFGMIRDTHNAHPEGTVVAYKDNSSVIEGAKIERFYP
                     NAAENQGYRFHEEDTHIIMKVETHNHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKA
                     GLTGFTVSNLNIPDLKQPWEQDYGKPEHISSPLDIMIEGPIGGAAFNNEFGRPNLLGY
                     FRTFEEKFDGQVRGYHKPIMIAGGLGSIQAQQTHKDEIPEGALLIQLGGPGMLIGLGG
                     GAASSMDTGTNDASLDFNSVQRGNPEIERRAQEVIDRCWQLGDKNPIISIHDVGAGGL
                     SNAFPELVNDAGRGAVFELREVPLEEHGLTPLQIWCNESQERYVLSILEKDLDTFRAI
                     CERERCPFAVVGTATDDGHLKVRDDLFANNPIDLPLNVLLGKPPKTTRTDKTVTPSKK
                     PFHADDIDITEAAYRVLRLPAVAAKNFLITIGDRSVGGMTHRDQMVGKYQTPVADCAV
                     TMMGFNTYRGEAMSMGEKPTVALFDAPASGRMCVGEAITNIAAVNIGDIGNIKLSANW
                     MAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSMKTVWQDGADKKSVVSPLS
                     LIISAFAPVQDVRKTVTPELKNVEDSVLLFVDLGFGKARMGGSAFGQVYNNMSGDAPD
                     LDDTGRLKAFYNVIQQLVAEDKLLAYHDRSDGGLFAVLVEMAFAGRCGLDIDLNLLLA
                     QTFITNHTALSQSLRTEEVKALAEWQETIARTLFNEELGAVIQVRKQDVADIINLFYQ
                     QQLHHNVFEIGTLTDENTLIIRDGQTHLISDNLIKLQQTWQETSHQIQRLRDNPACAD
                     SEFALIGDNDRSALFANLKFDVNEDIAAPFINSGAKPKIAILREQGVNGQIEMAAAFT
                     RAGFDAYDVHMSDLMAGRFRLADFKMLAACGGFSYGDVLGAGEGWAKSILFHPALHDQ
                     FAAFFTDPNTLTLGVCNGCQMVSNLAEIIPGTAGWPKFKRNLSEQFEARLSMVHVPKS
                     ASLILNEMQGSSLPVVVSHGEGRADFALHGGNISADLGIALQYVDGQNQVTQTYPLNP
                     NGSPQGIAGITNADGRVTIMMPHPERVYRAAQMSWKPEGWTELSGWYRLFAGARKALG
                     "
     gene            complement(29184..29396)
                     /locus_tag="WJJ54_000247"
     CDS             complement(29184..29396)
                     /locus_tag="WJJ54_000247"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341164.1"
                     /translation="MPETVIPAQAGIPISAFQQYLKVSVNPNFHIPNRTETTAFDLKT
                     YGSSCPPLYFLQLSAYPALGKNQKNR"
     gene            29491..29829
                     /locus_tag="WJJ54_000248"
     CDS             29491..29829
                     /locus_tag="WJJ54_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEZ7341165.1"
                     /translation="MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTE
                     IYRGAEYAVDFLPKVKIELVLADDAVERAIDVIVEVACSGKIGDGKIFVLPVEEAIRI
                     RTGERADAAV"
     gene            complement(29895..>30605)
                     /locus_tag="WJJ54_000249"
     CDS             complement(29895..>30605)
                     /locus_tag="WJJ54_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HEZ7341166.1"
                     /translation="AVADTVDKHAEAFNDIADSLDETNTKADEAVKTANEAKQTAEET
                     KQNVDAKVKAAETAAGKAEAAAGTANTAADKAEAVAAKVTDIKADIATNKDNIAKKAN
                     SADVYTREESDSKFVRIDGLNATTEKLDTRLASAEKSIADHDTRLNGLDKTVSDLRKE
                     TRQGLAEQAALSGLFQPYNVGRFNVTAAVGGYKSESAVAIGTGFRFTENFAAKAGVAV
                     GTSSGSSAAYHVGVNYEW"
BASE COUNT         6522 a         7151 c         9166 g         7766 t
ORIGIN      
        1 aaactgatta accgacaact gaccgaaaaa aacctaaaaa tagagaaagc atccgctgcc
       61 gtcgttgacg ccaccattat tcagaccgcc ggcagcaaac agcgccaggc ccgataacgc
      121 ccggcggaag tttttcggac atcgcgaacc ttgccctgct gaaaatacaa aaggccgcgt
      181 tcggcgatat ggggcgggaa caggtgagga gggtggatac ggggcatggt tggcttccaa
      241 gaagttgttg aaatatgggg agtttactgg ttcgggcgac gtttggggag ggggtgggaa
      301 ttcttgtttt gggaagtgga aaaaggtcgt ctgaaaatgg gtttcagacg acctttctgt
      361 gaagtgtgca tttgaagaca tccgctcgtt tggaggaaat taagttctgc ttatttagat
      421 gcatgaattt taataaaatc tcaaattatt tttgataagc aataaattat atgttatata
      481 aagttagttc tcactagtct aattatttaa atagaaatga aaaacagtaa gttaaaggcg
      541 gttgattttt tctgtggcgg aggtggaatg agctatggaa tgcaatccgc cggtattcag
      601 gttttagccg ggatagatta cgaacccagc tgcaaagaaa catatgaagc caatataaat
      661 gccaaattta tacaggctga tgtttttgaa ttgcagcctg aaaccttgga aaaagaactc
      721 gggttaaaaa agaatgatga tgatttgatt cttataggtt gtagtccttg tcaatattgg
      781 agtgttattc aaacagacaa aagaaaatcg gaaaaatcca agagtttgct tttggagttt
      841 cagcggtttg tagaatattt caatcccgga tatgttgttg tagagaacgt accgggaatt
      901 ctgagcagaa tgaaagaaag caggcttgat aatttcataa agttattgga agaaaaagga
      961 tttaccgtcc atttcggtat tcacaatacg gctgattacg gaattcccca aagccgtaaa
     1021 agatttacgt taattgcaaa cagaataacc aaagaaaagc tggaaccagt caagtattcg
     1081 ggcaaacggc ttacggtacg cgatgttttg ggaatggaaa atggctttcc caaaattatt
     1141 gcaggacacc aagacgaaac ggattttatg catagctgtg cgggattatc tgatatcaac
     1201 ttgaaacgat tggctttgat acctaaaaac ggaggaaacc gtttggcttt tgcgcatatt
     1261 cccgaattac agctggaatg ttttatcgga aaagacaata gttttaaaga cacgtttggt
     1321 aggctatggt gggataagcc cgcacctacc ataacgacca aattctttag tatttccaac
     1381 gggaggtttg cccatcctga agaagatagg gcgttatcac tgcgcgaagg tgcaacattg
     1441 caatcgttcc ctcgtaacta tgtctttaaa gcgggcagca gggacaagat agcccgtttg
     1501 attggtaatg ccgttcctcc gatgtatgcg gaaaaaatag gcagggcaat tgttgataat
     1561 atcgaatgtt agaaaaggag aaaacatgtc tgaagaaaaa ttgaaaatga gtttcgagcc
     1621 aaccgtaatc gaacatttgg gtgtaaagat gtattcgcac actgttcctg cgattgccga
     1681 gttgatagcg aatgcctacg atgcatgtgc tacggaagtg gaagttaggt tattcgataa
     1741 accggagcat aaaatcgtta ttaaagataa tggtatagga atgagcttcg atgaaatcaa
     1801 tgatttttat ttgagaatcg gtcggaacag aagggaagaa aaacaagctt ccccgtgcgg
     1861 aagaattcca acgggtaaaa aaggccttgg taaattggca ttattcgggc ttggcaacaa
     1921 aattgaaatt tctactatcc agggaaacga aagggttact tttactttgg attatgcaga
     1981 gattcgaaga agcaagggta tttatcaacc ggagtttcga aaagaatctg ttgaatccaa
     2041 tatcgaaagc gggacaacca taactttaac cgaactgacg aaaaagcaag gatatccgtt
     2101 agataattat gtagagcatc tttcccgctt gtttgatttt ccggctcagg attttaaaat
     2161 caaagtaagc ttgaacggct ctgaacctaa aatcattgat ggaaatctaa aatatgatct
     2221 tgttacccca caattcgaat gggaatacca ggatttagca accaatattt catcgttatc
     2281 ttcaaaattc gaacagtatg aatacagcgg attaatacaa ggtaagttca ttacaacgga
     2341 aaaaccttta aagaataata tgaaaggtat taccttgttt gccaacggca gaatggtaaa
     2401 tatgcccgag tttttcactg atagcgaatc cagccatttc tattcatatt tgactggatg
     2461 gctgaatgtg gactttatag ataatgacga tgaagattta attgctaccg acaggacatc
     2521 attagactgg aagcattcaa aaacctcaaa attacgtgtt ttccttgggg agatcgtccg
     2581 agccatcggg caagattgga gaaaaagaag aaaaaaagag aaagatgacg aagtgaaagg
     2641 cgaaagcgga gttgatatcg aagattggaa aaacaaattg ccaaaaaagg aaagggaacc
     2701 agtagaagtt attttgaatc gtttggaaga ttcggagctt acaaataaag agcaagcgga
     2761 agtaatctct gccttacata gtattattcc agaatatcct tactatcatt ggcggcattt
     2821 gcatcaggat ttgcatactg cctgtaatga tttttacaat gaaaagaagg attatttaag
     2881 tgctgcaatc gaggcagtta aagttttcga agataaggtt cagaagcaaa caggtcttca
     2941 tagcatagac ggaagagaat tgattgaaca agctttcggg agtaaaaatt ctatacttct
     3001 attaacgaat aacaaaacga aggcggaaca aaatttagaa gatggtcttg aacagcttgc
     3061 atgcggaaca tggactggat ttagaaatcc tgtacaacat gagttaagag caaatttatc
     3121 tcctagtatt tttaatgata aggatgcttt ggatttaata agcttggttt cgtatttgtt
     3181 aagaaaagtg gaacagacaa aaaaacgatc gaaggtggta tcttccaagt aatttatgac
     3241 cgatattttc actacatcca aacgttcttt cgtgatgtca aaaatccata gcaaagaaac
     3301 caaaccggaa atattggtaa ggaaatttct tttctcccaa ggttttcgtt atcggaaaaa
     3361 cgataaacgc tatgcaggca aaccggatat cgttttgccg aaatataaaa cagtcgtgtt
     3421 tatacacggc tgtttttggt acgggcattc ttgtaataaa ggacatatcc cgaaaagcaa
     3481 tacggatttt tggttggaaa aaatcacaaa aaattgcgaa cgtgatatta aaaatgaaac
     3541 cgagctggaa aagatcggtt tcaaagtgat tgtcgtttgg gagtgcgaat taaaaaataa
     3601 agctattggt agggagcgat taaatcggtt ggtcagggaa ataaaagatg ccgtctgaaa
     3661 aaatcagacg gcatcttcct ttaattaaga tcctcccaca tcttcaacaa ccgcttcacc
     3721 gacaccggat acggtgtctt caattcctgc gcgaacagcg acaccctcaa ttcttcaatc
     3781 atccatttaa acgcggcgag gccgtctgaa atggggagac cttgtttaat caggctgtct
     3841 gttttttcct gccacatttg ttccagctct tggatatcgg cttcgcgggc tgcgtcgcgg
     3901 gcggggttgc tgctgtattt ttcgaggcgc agggtcatgg ctttgaggta gatggggagg
     3961 cgcggccatt gtgcccacgg ggtgcgggtg gcgaagccgg cggcgagcag ggtttgcagg
     4021 cgtagtctta gaaggtgggt caatgggtgt ttgccgagtt tgctgttgag ttcggcgtag
     4081 acggcggcgg tttcctgcaa gtagcggctg agggcttctt tgacggcggg caggcggctg
     4141 cgggcgcgtt tgatttgttc tttgaaggct ttttcgttgc gcggcagctc gtcttcgccg
     4201 ataaaggcgc ggtcgcagac ggcttgggtg aggtcgtcac acagggtgtc ggcgttgatg
     4261 tgtttgagca gcatggcggc ttgggtgaag ccttggatgc ctttgttcag gtatttaact
     4321 tgttctttta gttgtagttt catgagttcg atcacgccta atcggtgggc ttgttcggcg
     4381 gcgggggatg tgtcgaacag gcgcagggcg atgcggccgt ctttttcttt ttgcaggccg
     4441 aggtagccgg tgagctgttg tttgccgcgt gcgaatttga tggattcggg cagggtgcca
     4501 atgtcccatg tggtcacgtt gtcgcgctcg aattcttggg tgttgtcgcg gaaggtaacg
     4561 gcggcggctt ggccgagttg ttgttgcaat tcatgcagtt tgcggccgcc ggcaagctct
     4621 tgtccgccgt cgtcgataat gcggaggttg aaatagcagt gttcgggcag cctgaacgcg
     4681 gcccattcgt cttggttgat ttgctcgagt atgcggatgt cgcctgcggt tttggcgatg
     4741 gcttgggcaa gttggggcag gatgggggcg ttgcgatcag ggttttggct taaaaattgg
     4801 gtgatgaaat cgggtacggg cacgcaaatg cggcggattt gcttcggcag agctttaatc
     4861 agcagctgga ttttttcgcg caacataccg ggcaccagcc attcgagcga cggcgcgtgc
     4921 aggcggttga ggacggtcag cggtagggtg agggtaacgc cgtcgagcgg atggtgcggc
     4981 tcgaagcggt aggaaagttt gaacttgccg tctgcggttt gccagaattt ggggaattgc
     5041 tcttcggtaa tgtgtgcggc ggcgtgttgc atcaaatcgt cgcggctgag gaacagcagg
     5101 cgcagattgt cgcgttcggc ggttttgatc caggcttgga aggtacggat gtcggcgagg
     5161 gggaggggtt tcagacggcc ttttgggggt gcaggctgct ttttgggttt ggggtcgtct
     5221 gaaagtgttg aggttgcgga aaagttggtt tgggtggcaa ctgttttgcc ctctccccag
     5281 ccctccccca cgggggaggg ggcggtttgc tgcagatttg caggacgcag gtcgtctgaa
     5341 aacgttgaag ctgaggcact ctgttccctc tcctgcggga gagggtttgc tgcggttgcg
     5401 gaaaagttgg tttgtgcggc aactgttttg ccctctcccc gaccctccct cgcgggggag
     5461 ggggtgggtt gctgagtagc gtaggttggg ttgtcaaacc caacagtttt tgcagttgcg
     5521 gctgatgttg ggttttcaac ccaacctacg gtgttgccgt gattttcatt ttggcgagac
     5581 ccattacgct tgtttttacg aaactcgttg cgctcatttt cagacgacct ctcggctttg
     5641 tcagattcaa taatccgtac ggaatcttca cttccccaaa cgctgccttg cgcgtctttc
     5701 caagccattt cgggcagtcg ttcgttataa aacgcaaaca gggcttcgtc atcgaccagc
     5761 acgtcttgct tgcgcgattt gtgttcgagt tcggtaattt ctttaatcag ctttttgttg
     5821 tggacaaaaa aatccgcttt caaatcgcat tcctgcgcca ccaacgcgct gcggataaag
     5881 atttcgcgcg cttcttcggg ggcaactttg ccgtaagaca cggggcggcg cggcaatacg
     5941 gtcagaccgt aaagcgtcac gcgttcgctg gcgacgactt cgccgcgttt ttgttcccag
     6001 tgcggctcga aatagtggta gcggacgagg tgcggggctt cctgctcaat ccattcgggc
     6061 tggataacgg cgacgtcgcg cgcataaagt tttgtcgttt caacgagttc tgccgccatc
     6121 acccatttgg gtttggcttt gaacagggcg gaggcgggga aaaggtggaa gcggctgccg
     6181 cgcgcgccgg tgtagtcgtt gccgtcgggc gatttcatgc cgacgttggc gataaggccg
     6241 gtcagcaggg cgcggtggat ttgttcgtag cccgcttctt tggcggcgcg gatttgggcg
     6301 cggtgttgct ttttatccag ttgtttttgt ttgagcttgg cggataagtc ttggtcaccc
     6361 gcattttcag acgacgtgag ctgcctgatt tcgggaggtc gtctgaaagc ggtttccttg
     6421 gtggtcaaac ccatttcaat cgcggtttgg gcaagctggt ggtgcagctc gcgccattcg
     6481 cacatacgca ggtgcgacag aaaatattgg cggcaccact gcaccagctg cttgttggac
     6541 aaacctttgt cgcgctcgcg ctgaaagctg tcccaaatat tcagataggc aagaaagtca
     6601 gattgcttgt cggtaaaacg ctcgtgcgcc ttggccgcgg catcacgcgc ttccagcggc
     6661 cgctcgcgcg ggtcttgaat cgacagcgcg gacgcaatca ccaatatttc cgccatgcag
     6721 tcgtgtttct tcgccgccag caagatgcgt gcgattttcg ggtcgatggg caggcgcgcc
     6781 atttgttcgc cgagtttggt caggcggtaa cgcgtgttgg taccgatatg acccgaactg
     6841 ttttgcaggc cgtctgaaac attggccgga ttggatcgtg catccatgcc tgatccgcgt
     6901 acttggtttt tcatattttg catagtcttg tcggtcgggc atcttccccg acatcatcta
     6961 aatttgtttt tattggtttt cacgtcgctt attgcggata aacatattcc gccttgccat
     7021 cgcgaatgct caagctgcct gcatcgcccg taatcaggtt gcccgttacc gagccttcgc
     7081 gacaacctga aaccggcata tcgtagccca acgtgtgaat caggaacgtt gaaagctgct
     7141 gatggaaggc aatctcgcaa ggtgcaaaag cctggttggc agcctgttgc acggccttat
     7201 ccgggctgta caacaccagc ggcacgagat agctgtcggg ctgcaccgtg ccttgattgt
     7261 agatatcttg gcgaacatac tggccatgat cggaggtata ggcaaacagc cagttgccgt
     7321 caggctgctt ttgcagctgc tcgaatacgg tttgaatcat ttggtcggtt ttgtggatgg
     7381 tgttgtcgta cttatccaca atatcggctt cgccgaatac tttatcttga ggctgcaaca
     7441 atgcgccgta tggggcgtgc gaaccgcgtt ggtgcaacac gataaaatgc ctgccctgct
     7501 gcaaattgat tttgtcgaac agcggcagca gcttctcatc gggcatattg tcgccgttgc
     7561 cgtagccaag ctgcgtcggt tgaatcagat ggtctatcca tttcttaccg attaagttca
     7621 aaattgccat ttggttttca gcctgagcac tgtaaaaata cgtctcatag ccctgctctt
     7681 tggcgaggcg gaacatattg gtatcgccgc cgctgatttg ttccaagccg ttggcatgcg
     7741 gtatgacgtt aaagaaactg ggcagggata ctgccgtcat aaagcctgcg gaataacttt
     7801 gtttcacaat cggcttaaaa tcggcttgcg acagctgggt taaaaacggc gaagtttcgc
     7861 gcccgtagcc aaacaatttc aaatgcgccg cgctttcgct ctcgcccata atcaggacga
     7921 tattttgaac actgccctgc ccgattttgc ttggcgcaga ctgtttgaac acagggattt
     7981 tgcttaaatc aaataactga tacggcaata cgcgtccgac aaaataaccg aagctgaaat
     8041 aattggcttt gatacggctg tatgtcggtt tgggcgaaat accgtgctct tgtttcgtgt
     8101 cgaacgaacg cacgaaaatc atcagcatta ggaaggcaaa cagtatatcg gcagaaaaat
     8161 gcgtcttacg gcggaacttg gcaaggctgc aaaacaacat gacttccaac atgccccaca
     8221 acgcaggcag ccacaactta tccaacatcg acgcccccgc gccgccaact tcggtaatct
     8281 ctttcagcat cagccaataa ttgatgcccg tcatccaact ttgataaacc gcgtaatgca
     8341 cattgttggc aataatgctg aacgcgaaaa acaccgcaat caacaaacgc gtcgccttat
     8401 aacgcgcaaa cagatacagc gcagcaatca caaatgtcag cgcaaacgtt tctgccattt
     8461 ttgcagccgg taaggtttca attccgaata caaagcgata agcaatttcg ctggcagtaa
     8521 gtagggacga atacagaaag agaacgaaaa gggatttttt cataatggga agttcacaat
     8581 aaaagttgca ggacgggttt tggggctcgg caacggtatt cttcagcagc tatctgttta
     8641 cagattgttt ttcaaaaaac gaggttgtct gaaaagggtt tgtggagttg attaagggtg
     8701 gtaggttgtt tttggttttg taggtcaggc ataaatgccc atcctacttg atatacacaa
     8761 ttttagtacc gtcaatacgt aggacttggg tatcttgtaa atgttgtagc agtttgtcag
     8821 tttcttgtgc attggatttt gtgagtgcct ggattgtatt gcgtaaagtt ttggttttat
     8881 taggacggtt ctttaacgat aacgcggcaa tcactttttt ccaaataatt tcatcaggtt
     8941 cccatgcggt ttttttaggc tgcttgggcg ttggctgtgg tttaggttca gtaaacggtg
     9001 catattcaat tttcccattg ttttggcgga tcaggttttg gtcgcgcaaa tgtcgcgcaa
     9061 aggattgaat gtcgttggta ccgactgtta agtgaagtgc atctgctcgg ttttgcacga
     9121 cggcttgaaa atcagcgtag gttttgggac gttggcttaa aatatggcgt tggattcttt
     9181 gtaacaaatc attatcactg agatggtagg aaacggtttc ctgttcatca atgctgatga
     9241 agttttgtgc tttgagttta ttgataacgt tagcagtggt tatttcgcat tcttcatcgg
     9301 ttttttcttt aaacaaatca ctcaaaatat gcttacgcag attttgtcgc aggttatgca
     9361 ggcggcaggg gcggaaagcg tcggggcggc gcagtgcagt tagggctgct tggaaatagg
     9421 aagttaatgg ttgctgtggt ttgagggtgg tttcaggctg aggagtgttt tccagcaatg
     9481 ctgacggcgg ttcggtagta attttctgat gttgtacttc atctatattg gctaggcgca
     9541 cgataccctt cgcctggtgg tttttcaaaa tatgttcgac cagaacatcg tatcctccat
     9601 cacgcgagag tatgccgatt tgggcattgg ggtctgtggc ggtaatttgt ccgaggtaat
     9661 aggacaggta aaaatccaat gcgtttttcc ctgttttttg taactggaca agatggacac
     9721 gttcgccgaa acgtagtagg gattgcacca gactaatagg taacattttg tgtaatacac
     9781 ctataaatag ccaaatatgg gtattttcgg ttagtaattt gtctaagttt tgcggctgga
     9841 cgttttcaaa atcgatgagt aagtgtttca tgtttttacc gtgtgcaatg ttgtaggttg
     9901 ggcatctaga tgtgccgtag ttttatcgtt tgttggtctt tgtcaggtag aagtgtatat
     9961 cctacttgtt ttcaggcggc ctccactgcc cctaattcca gcaacacctg aaacccatca
    10021 ttaatatacc gcgaatcggg catttctaaa aatgggaatg ccgctacgtc gccgagtttc
    10081 agcgatgcca tgcgcaggat gacggcggcg aggttgctgc gggcgatttc ggggtcggta
    10141 aattcggggc ggttgttgaa atcttcttct gaaaacaatc ggatacatac gcctgcggag
    10201 acgcgtccgc agcggccgga gcgttggcgg gcggcggctt gggagatttt ttcgatatga
    10261 agctgctcca ctttcgcccg tgcggaatag cgtttgacgc gtgcgaggcc ggtgtcgatg
    10321 acgtatttga tgcccggcac ggtaagcgag gtttcggcga cgttggttgc cagcacgatg
    10381 cggcgtttcg cgcctgaggg gtggaagatt ttgtgctgct cggcgtgcga caggcgtgcg
    10441 aacaggggca ggatttcgtc gttgcggcgt agcgtggatt tgcgcagggc ttcggcggct
    10501 tcgcggattt cgcgctcgcc cggcaggaat accaagatat cgccttcgcc gtgtcgcgcc
    10561 aattcgtcgg ctgcatcgac aatcgcgtcg gtcagctcga cttctgcatc gtcttcgtct
    10621 ttgccggtca gcggtcggta gaggatttcg acgggatagg tgcgtccgct cacttccagc
    10681 acgggcgcgc cgttgaagtg ttgggagaag cgttctgcgt ctatggttgc cgaggtgatg
    10741 atgactttca aatcggggcg gcgcggcagc agttgtttca aatagcccaa aaggaagtcg
    10801 atgttcaggc tgcgctcgtg cgcttcgtca atgataatcg tgtcgtaggc ggcgagataa
    10861 cggtcggtct gcgtttccgc cagcaggatg ccgtcggtca tcagcttgac gcaggcatcg
    10921 cgcgaggtgt ggtcggtgaa gcgtacttta tagccgaccg cgctgccgat ttcggatttc
    10981 agctcttcgg caatccgctc tgccacggag cgcgcggcca aacggcgcgg ctgggtatgc
    11041 ccgatcagcc ccgccgcccc acgcccgagt tctaaacaaa tcttgggcag ctgcgtggtt
    11101 ttgcccgaac cggtttcgcc gcaaataatc gttacctgat gctcggcaat ggcttttttg
    11161 atttcttcga gcttctcgtg aacgggcagg gtgttgtcga attcgggttt gggcgaggct
    11221 gccaaacgtt tcaaaaagat ttcgtgcgat tttcggtatt tttcttcgac tttggacaag
    11281 ccgccgtatt tgttgggatt tttgaaggca gaacgcagga agtggcggtc tttggagagg
    11341 gtttgggaga ggtcgggaaa catgggtgtg cgtgtgcggt aaaaagtgca attatagcaa
    11401 acgcttcggt tttgtttagg caatatcggg atggggaaat gccgtctgaa aaccgcattc
    11461 tgtcgttcag acggcattgt tgctgaaatt tcaagcggcg gcggaacggt attcgaatca
    11521 aggcggctgc cggcgtttga tcgggggcgt tttaattttc agacggcatt cccgttttgc
    11581 tgtttgctgt ttgcggtctt gcgggcgcat tgccggtttg ggcggcggtt tcttgaagca
    11641 cgcgctggcg gaagcgcatt cccgatgcgt ggtagaacgg acgtggcgaa aactggcgcg
    11701 aaacctgcga ggcgaaaatg caggcaatca gcatccaaaa cagcaggctt tgtccgccag
    11761 tcatttccat gacgacgacg gcggaagtaa tcggggattg tgtcgcgccc gccagaaatg
    11821 ccgccatgca gatgaggacg atgatgtttg caccctgcga tatgtcggcg atggcggcga
    11881 tatgctcgcc caaaaccgcg cctatggtca gcgagggagt gaaaatgccg cccggaacgc
    11941 ctgcccaata gctgaatacg gtggcgagcc atttggcggc ggcgagtccg aagggggctt
    12001 cgtagatgcc gtgcagggct tgggcggctt cgtggtagcc ggtgccgtag gttttgcctt
    12061 ggtagaacgt gccgagcagg gcgagcagca gccccatcag tgccgccagc agcagcggac
    12121 ggttgcggat gaagccgcgt atcttgcgcg gtgcaaacgc cgccgcaccg cgatagagca
    12181 aacgtccgaa cagcccgccc gccgcgccgc aaaccaggcc ggacagtgcg acccacagaa
    12241 agatatgttc caatacgccg ccgttgaagc cggaaaaata cgggttgttg ccctgaatgg
    12301 cgacctgtat gaaaccggag gcgagcacgc ccaaaagaat ttgcctctcc cagcgcaaca
    12361 tgatgccgcg cccgagttcc tcaatggcga aaatcacgcc cgccagcggc gcgttgaacg
    12421 cggctgccaa accgcccgcc gcgcccgccg ccatcaaatc gttttcctgc atccctttga
    12481 atgccaagcc gtgtttcttg caccacgcgc cccacgcgcc catcactgcc gcgccgacct
    12541 gcacggacgg accttcgcgt ccgatggacg cgccgaacag catacccaaa aaggtcagcg
    12601 gaatcttcag cagcgtctgc ccgaggcgga tcagccgcgt tttctgtgcg ccgtagggca
    12661 gcgacagtga ggcgatgacc tgcgggatgc cgctgccggc ggtgaagggg gcgaatttgc
    12721 gtgtgagcca cgcaataagc ggtaaaccca aaggaagcgc gacccacgcg aaccacgggt
    12781 attgttgaac cagtttggcg ttcagttcca gcgcaaaatc ggcaagatgg gcaaaaaaca
    12841 gcgcggtcag ggcgacgagt gccgaacctg ccaaaaggaa cagaaaggcg atgcttttgc
    12901 gcgacaggcg gcgggtttgg cggattttgc gggcgaggcg gcgggggaat gtggaggtca
    12961 tggtatgttg tccggcggtt cagacggcat tttatgtatg ccgtctgaag ccgtgtcggg
    13021 tcaggaacgg tagtcggcgt tgatggaaac gtatccgtgc gacaggtcgc aggtatagac
    13081 ggtggcggcg gcttgtccgc gatgcagctt gatgcggacg gtgatttcgg ccttcgacat
    13141 caccgcctgc ccttgtgctt cggtgtagct tgcggcgcgt ccgccgtgtt cggcaaccaa
    13201 aatatcgtcg agatacattt ccacgaggtc ggtatcgagg tcggcaacgc cggcataacc
    13261 gatggcggcg agcagcctgc cgaggttggg gtcggaggcg aaaaaggcgg ttttgaccag
    13321 cggcgaacgt gccacggcgt aggcggcttg gcgggcttcg tcgcgggttt tggcgttttc
    13381 gacgcggacg gtgatgaact tggtcgcacc ttcgccgtcg cggacgatgg cttgggcgag
    13441 ttcgagcgcg aggctgcaca acaattcttt gagttgggcg taacgcgggt cggcgatgtt
    13501 gtcgatttcg ctttggctgt ttttgccagt ggcgatgatg acgaagctgt cgttggtgct
    13561 ggtgtcgccg tcaacggtaa tggtgttgaa ggtttcgtcg gcgatttcct gcgccatcag
    13621 ttggaggacg ggttgggaaa ctttggcatc ggtggcgatg aaaccgagca tggtcgccat
    13681 attgggatga atcatgcccg agcctttggc gatgcccgtg gcgcggacgg tgtgtttgtc
    13741 gccgaccttg ccttcgcgcg aggcggcttt gggcacggtg tcggtggtca tgatggcgcg
    13801 tgccgcttcg ttccagaagg caggctgcat tttgggcagc gcggcgatga ttttgtctgc
    13861 gggcagcggt tcgagaatca cgccggtgga gaagggcagc acctggttcg gtttgcagcc
    13921 gatttgccgg gcggcggcgg cacacactgc caaagcatcg attctgccct gtgcgcccgt
    13981 acccgcgttg gcgttgcccg tgttgatgat gagggcgcgc acgccgtctt cgtcgaaaag
    14041 gtgcgatttg gcgatgtgga cgggcgcggc acagaaacgg ttggtcgtga agactgcacc
    14101 gacggtgctg ccggcggcta cggcaatcag tgtcaggtcg gtatgcccgg gcttcttcac
    14161 gcctgcttgg gcggtgtaga gggcaatgcc gtcgatgtcg ggcagttgtt cggcggtttt
    14221 ttcggtcagg ttgacagcca taacggttct ccttgcgagt gtgtcggcgt tcagacagca
    14281 tgggctgaaa tgccgtctga aacgggttca aaatcccaaa acggggatga gcagcggcgc
    14341 aatcagcgcg gtcagtacgc cgttgaacgt cagccccagt cccgcgtatg ccgccatacg
    14401 gcggctgcgt tcgagcgagg cggcaatccc catcgcgtgc gaagccgtgc cgagcgacat
    14461 acccacggac gagggcatga cgactgtgtt cttcagcatt ttgtaaccgg caatctgtcc
    14521 gaccagaccg gcaatgatga cggtggcggc ggtaatggcg ggaatgccgc cgatggagcg
    14581 ggtgatttca atggcgatgg ggttggtaac agatttggac gcgagcgaga ggacgacttc
    14641 gcgttccgcg cacagccatt tggcaaaata catccccgta acaatgcccg taatgctgcc
    14701 tgcaagttgc gaaacgataa cgggcagcca ctggttgaag attttacggc ggttttggta
    14761 gagcggcacg gcaagcacga cgacggcggg cttgagccag aaatcgataa actgtgcggc
    14821 gttgtggtac accgcataat cgataccgag gattttcagg taggcaatca gcacgatagt
    14881 gctgacgagt acggggttgc agaagatatt gcccgtgcgc gtgcgcacga taatcgcaag
    14941 cgcgtacacg gcaagcgtga ggaaaagcag aacgctgggc tgcctgagga tttcgttcat
    15001 cagataatgc tccgtatcca gcggtgaacc ttgcctgtaa ccagcagtac gcacaaagtg
    15061 ctggcggagg cggaaaccag tatcgaaaac caatcgtcgg caatcaaatc caaatagctg
    15121 atgaccgcca cgcagggcgg cacgagaaac agtgtcagat tcgccatcag cgcgtcggta
    15181 agctgttgca gccaagacgt tttgacccaa cccgcctgca aaagcgcaaa cagcacgccc
    15241 atgccgacga tgctgccggg cagtttgatg cctgctagga aaacggcggt ttcgccggcg
    15301 gcgaggcagc cgaggatgat gaggagcgcg cggatgatgt tcatgttgtg tgtctgtctt
    15361 ttgacggcgt tgtgataaat cttgttaact gtttaatcat aacgtcaaat atgccgtctg
    15421 aaaagccgaa gccgcgcaca aacgcaaaaa cggcacggat aaaccgtgcc gcagcaaccg
    15481 gggcgtgttc agactttgcg gtagggattt tccaaacctt caatcagcgc gagcaggtaa
    15541 tcgcgcaact gacgttcgcc gcaacccatc agcagcgcgt cttcaaacgc gtcttgtgcc
    15601 gtctgataca gctcggccat attttcggac atcactttga tcttttcggt acaggacacg
    15661 atctgtccgt catcgtcgta ccatttgggc atttcgggca tactcattgc gtattccttg
    15721 ggaaatcagt tcagaaagcg ggacgggtcg tttttcttga cccggcgggc gaacgcgtat
    15781 ttgccgctcc aatatttgtg gctcaggctg gtgatttcga tatttttccc cgtgcgcggc
    15841 gcgtggatga agcggttgtt gccgatataa agtccgacat gggaaatgcg gctgccgccg
    15901 agcgtgcgga aaaacaccat atccccgggc tgcaattcgc ttcgggcaac cggcgtaccc
    15961 atccgcgcct gttctgccga cgtacgcggc aggttgatgc ccatggcgcg tttaaagatg
    16021 tgctgcatga agccgctgca gtcaaaaccg gtagaaaccg atgtgccgcc gtagcggtag
    16081 gcaataccca aaagtcccat cgcgttgccg atgagttcgt cggcattgcc cgcccgccga
    16141 gcgggggctc ggttgacggg taaaacgggc tgttcgttaa gccccatcgc gttgccgatg
    16201 agttcgtcgg cattgcccgc ccgccgggcg gggactcggt tgacgggtaa aacgggctgt
    16261 tcgttaagcc ccatcgcgct gccgatgagt tcgtcggcat tgcccgcccg ccgggcgggg
    16321 gctcggttga tgggtaaaac gggctgttcg tcttcggcaa actgtctgag aatctgctcg
    16381 cggctgctga gcaggttggt caactcgtcg gcaagggcgg ggcggacggc aaacatcagc
    16441 cacaaaaccg cccaaactgc cggtttgaaa aaagaatcca tatcggtgtt tccgcgcagg
    16501 aggcatcgtg ccgccgtgcg atgttatgct gtatcagtcg aaaatatctt gttgattgta
    16561 tataaaaaaa cggctgtttg gcaaaaaacg gcttgttaga ttgagttaat atgttgattt
    16621 ttatataatt tattgataat ttgggaagcg catccgccgt ccgtcttgtt ttcgcgccga
    16681 ccgcaaccat atagccgcca tccgaacaat cagtcagaga aaatcatgaa tcaaaccgcc
    16741 atcaaccgcg ccgatgtgcg tacccgcttt atcttcgacg atatgcccgt gcgcgggctg
    16801 cacgtccgtc tggaaaacgt gtggcagcac attgtaaaac agaaaaacta tcccgccgcc
    16861 atccgccgcg ctttgggtga gttgttggcg gcgggtgtgt tgctgtcggg caacctcaaa
    16921 aacgaaggca cgctgattgt gcaggttcag gggcgggggc ggctgaaaat gctggttgcg
    16981 gaagcggctt ccgaccgtac cgtccgtgca accgcgcgtt gggacgaaac cgcagaaata
    17041 gccgatgacg aaagcctcgg cgaccttttg ggcgagggcg gcgtattcgt gctgacgctg
    17101 cagcccaaag acggcgaacc ctggcagggc gtagtgcctt tggaaggcgg cggtatcgcg
    17161 caaatgttgg cgaactatat gaagcgttcc gaacaaatcg atacgcacat cgtcctgtct
    17221 gcaagcgacg aagcggcggg cggtctgctg gtgcagcgtc tgcctgaagc ggtgttggat
    17281 gaagaggcat gggaacacgt cagtacgctg gcgcgtacac tgacggcgga cgagctggca
    17341 gaattggatg cgcaacatgt tttgtaccgc ctgttccacg aaacgccgcc gcgcgtgttc
    17401 gagccggaaa cgtttgaatt ttcatgcacc tgttcgcgcg gcaaagtcag cgatatgctg
    17461 ttgatgctgg gcggggaaga agtcggcggc gtggtggtgg aacaaggcag catcgaagtc
    17521 gattgcgatt tctgccacag caaatatgtg tttgacgaaa ccgatgtcaa cgcgctgttc
    17581 ggggaggatg tggtcggcgt tgccaaaggg ctgccccggc ataccgtcca ataatcttgt
    17641 gcaacaagga taaatagtca aatgccgtct gaagcagctt ccgcttcaga cggcattttt
    17701 gcgcgggttc agacggcatt taaagcagga atagggtggc gagccccaag aaaatcagga
    17761 agccgccgga gtcggtaacg gcggtaatca gcaccgagct gcccagtgcg ggatcgcgtc
    17821 cgaacttttc cattaccacg ggaattaata cgccgacggt tgccgccagc aggaggttga
    17881 gcgtcatcgc ggcaatcata accagcccga tgccgaggct gccgtagagc agccatgaaa
    17941 ccgcgcccat gacggttccc cagataatgc cgttgactag ggcaacgccg acttcttttt
    18001 tcaacaagcg ccccgcctgc attcccgtca actgccccat cgccattgcg cggacaatca
    18061 tggtaatcgt ctggttgccc gagttgccgc cgataccggc gacgatgggc atcagcgcgg
    18121 cgagtgcgac gattttttcg atgctgcctt caaacgcgcc gatgacgcgg ctggcgagga
    18181 aggcggtgca gaggttgacg gcgagccaca tccagcggtt tttcaccgaa tcccatacgg
    18241 gggcgaacag gtcttcctct tcctgcaaac ctgccatgtt caacatatcg gcttcggatt
    18301 cttcgcggat gacgtccacc atctcgtcaa cggtaatcct accgatgagc tttttgtttt
    18361 catcgacgac gggcgcggta accaagtcgt agcgttcaaa cgcctgcgcc gcttcttcca
    18421 cgtcgtcttc ggcgcggaaa cgcacgacat ctttcgccat cacgttttcc accaagtctt
    18481 cgggatcggc gaccaaaagt ttgcggatgg gcagcacgcc ctgcaacaca tcgttttcat
    18541 cgaccacaaa aatcttgtcg gtatggtcgg gcaggctgtc gaagcggcgc aggtaacgca
    18601 gcaccacttc acaggcgaca tcggcgcgga tgctgaccaa ctcgaagtcc ataatcgcac
    18661 cgacttggtt gtcttcgtag gacattgccg ctttgacttg cgcgcgctct tcctcgtcgc
    18721 gcgtctgcaa ggcttcataa accacttggt gcggcaaatc gtctgccagt tccgccaatt
    18781 cgtccgcgtc caaatcgtca actgccgcca acaattcgtc cttgtccatc gactcgatca
    18841 gcgtttcgcg caccgcgtcg gatacttcca gcaatacttc gccgtcgtct tcgggtttca
    18901 ctaaaatcca gacgatattg cgttcgcgcg gcggcagcga ttccaacacc gccgccacgt
    18961 cggcagggtg cagctcgctc aagaggacgg tcagctcggt cagcttgtcg cgcagcggcg
    19021 cgtcttcgag cggtgtaccg ttttcgattt gttcaaaagc aggttcgagg atttcgcaga
    19081 gggagtggac acggtcgaaa tcggcggaaa cgcgttctac atcgttttcg ataccgtcgt
    19141 tttcaaggtt cggaggggtt ggttcgatgc tcataaatgc tccgcccgcc gtgcgcgggg
    19201 aggcattccg gcgggatggt tattgtcgtt tggaatcgga aagggtgttc agtaaaaacg
    19261 aactgggaag gtccataata aaagcctgac ggtacaggcg cagggttgga aacggcacta
    19321 ttctactccc ttttggaacg gtttactatt tttaacgcaa atgccgtctg aaacgcgggt
    19381 tccagacggc atttttatcg gcttgttacc agttgtagcc tattttgatt cctgcctgtt
    19441 tgtggcgggc ggtgttgctg tctttgccgt aagcggcatg aagtttggcg ttccagcctt
    19501 tgtatccggc gtcgatttgc agggtatgca gtgtgccgtg ggcggcttgc tgcagtaagg
    19561 tacggtcgtt gacgctgagg gcggaaccgc tgttttggcg ggtatggtag taatcgctgc
    19621 tgaaagcggg ggtcagcttg gcttgaccca gttcgacggt tttatcgaga cggatgccgg
    19681 catgccatgt ggtttggatt tgcgccgggc tgtttatctc tgcgccgtcg agtacgtacc
    19741 ggttgccgtt gctgcggttt atacggatgc cggcataggg tctgaggttg atgccggtat
    19801 cgattttgat gccggtatcg attttgatgc cggtgttgat gcctgcatcc catgcgtggc
    19861 ggcggacggc agccccgtca taatcggtaa atcgggtacg gctgttgctg tagcctaaat
    19921 ctgccgcggc aaagagtgcg ccgttttccc ctttgacgaa cagatgtgcg ccgttgctgc
    19981 ggtttcgggc ggatacgcct tcatcaaaac ggttgtttgt gcgctcatcg gttaaaatcg
    20041 taccgacact gagacggtcg gtgatgccgg tttggatgcc gatatgtgca tagttggtag
    20101 tttgttggta gggacggtgt gtgccgctat ggtagtcggt ttgttgcgta ccggtttcca
    20161 gccagatgtt ttgctgctgc ggatcggtaa ggtggcggtc gatgcggcgt cccgcctgtt
    20221 gccggccggt attgtaggcg gcctgttcgg aaacggcggt gttggccgac cggctgatca
    20281 gttcggccag gttcggcata cggatgccgg caacgccggt tttcaaactg tggatttgtc
    20341 gggacagacg gttgagtgcg ttcaggtagg cgtgccgggc tgtttcgacg gcttgcgcat
    20401 cgccgccttg ccgtgctttg tcaagttcgg attcggccat ttctacacgt tctatatacg
    20461 tatccagttc ggtttcgaag agtgtcaggt cgttcgtgtc ggcggctttg gcaacctgac
    20521 ggcagatatc gacactgtat ccttgtgcgg cacacaggtt ttgggcacgc gtcagaatgc
    20581 cggttagcgg gtctgtctgt ttcaattggg cggacagata ttggacttgg ctgtcgatgc
    20641 gggcaagttc ggtttgactg ttctgccagg cctgtagtgc ctgcctggtc gcgtcagagt
    20701 catgttgaac ctgtctgctg atgtcggttg cctgtaattg gttgtatgcc tgttggttgc
    20761 gctcatgttc cgcacgcgtg gcttcaattt gaagttcggc ctctttgagc gggttgtaca
    20821 ggctgtatcc gttgttgttt ttgcggagga tgtagcggta ggcacccaaa tcggcatagc
    20881 cgttttggag ggtgaatcgg gcttggtggc tgtgtttcgg attgaggctc acaagtgcaa
    20941 gcgattcggt tgtttgaggt tcttgtccgg tgtttttgac gtggatttgg aatgcgccgc
    21001 ggctgtcccc ttccagtttg aggggggggc attttgtttt cggacgatgc cggtcaggaa
    21061 tcggaatgtg ccgaacccgt caagtgtgcc gttgacggtc agtgtgttga agcggttgtt
    21121 gtgtgtatta ttggcgaaat cggggttcag ggtaatttgt gcgccgtcaa gcgtcagtgc
    21181 gccggtgtgg ctggactggg aaagtgtcca gttgctgtct gcttccatgc ggactgcggt
    21241 gtctttgccg gcacggatgc tgccgtacag gtgtgctttg cccaggcgga gctctgaacg
    21301 gtcgttaagg gtaatgtcgc cgcgtacttg cgttgcaggt agtgcacgat agttttcggc
    21361 ttttaaaacg gcgttgggtg tgcagtgggt gctgccgcta tggtaggagc ggtagcattc
    21421 cggtgttttg ccttgggtaa agccgaggtc gatgccggac agattgtatg cggttatgtc
    21481 gccgtccaga tgcgcggtat tgcgccctgc cgtcagtcgg gcatggtttc gcagggtgaa
    21541 ccgtgcagcc ttgaagctgc cgtcggtcca ttcgttttca agaacgggtt cgcgtttggc
    21601 ctggtggtcg taggcatggg gtacgggcct gcctgacaca atcatattgc cgccctcaat
    21661 caagacttcc ccgttaaggt tcatgccgcc gttgagcaac agcgtgctgt cggtgcgttt
    21721 gggacgatag tgcaggttga gtgcgccgtt gtaacggtat tcgggccggc cgtatacggc
    21781 ggcatttgcg atatggcggt ttttttctat ggctgcttcg ccggtcatgt ccgagaaatt
    21841 cccagtcttg ggtgctgtag gcattccatg ggaagtaggc gccggggttg ccgccttctt
    21901 tgaggcggta atcgtcggta cgcctgcccc tgtgcgggtt ggcgtattcg tatagggcga
    21961 gggcttgtgt ggggtgtttg gaccattcac ccattcgata ttggttttgc tgtaactcgg
    22021 tgcggctttg cccgtttgcg cgttctcacc caagtatccg ccgaaggtaa ttaggtcggg
    22081 gcgggcattt tcggcttggg cgacttgttt ggcggcctgt tgcctgttgt tgccgataaa
    22141 ttgccagctt gttgagtttt tcatatttaa cgggaaaaat tcgcgcgggt tgccgccggg
    22201 tttgagtatg aagtagtcgg tccgacggtt gcggtgcggg ttgatgtatt cgtaaaccgc
    22261 cgcgttgcct tgcggacggt tgccccattg cacccactcg acatgctcgg gactgaggac
    22321 ggggttgccg gtcagcgtca gtgtcgcggc ttggtcaggg ttgtggttga cgatttgcgc
    22381 gccgccgtcc gcatggcgga tatgggtaaa ggcaaggttg ttgccgttga ggtcgagccg
    22441 tccgcccctg aagccgaaat agaggttttc ggatttgatt tgctggctgt cggcgaggac
    22501 ggccgtgccc ctgccgctgg tgatgccgac ttggttgaat gcttgtttgc tgccgtctga
    22561 agcagctttt tgggcgagta cgacagtgcc ttccccgatg ctgatgtcgc cctggttgat
    22621 gccttgtccg ttggcgataa gcgtgcctgc gcccagtttg gagagccggt cgcctttggg
    22681 gttgctgact tgccagaaga cgcgtttgcc gtcggctacg ataacgcctg caccttgcca
    22741 tgtgtggttt ttaccgacga cggtgaagtt gctgtcgaac tgcaatgcgc ctgcgccttg
    22801 gttgatattg tctgccagca tcagtgtttt gttgtcgaac ttgctggata ggatgagcgt
    22861 tttgccggca tcttcagacg gcatgtgcct gctgtcgttt tgtggggcaa gcgaagggtt
    22921 tgcaatgggc agggtgatgc gttcgttgag cccttgcagg gtgctgtcgc cattaccgtt
    22981 gtcgcgccat atgagttcgt tggtggtcag cccgacatcc agccgggttt cgtattggcg
    23041 gatggtggaa cggatgaatt cgggttgcgt gacgatgtat ttgttgaaga aattatcgaa
    23101 gccggcgtag gtgctgagta cgcccgcaag cacccagcgg ttttcatgct tgtcgaaggc
    23161 aaacaggggg gaaccgctgt ctccggcgat tgcgtaggtg ttaaggggtt ggtcggtcag
    23221 gctgccgccg acgagtaagc cgtggttttg gaaccccaat actttcagcg gcgtgccgcc
    23281 ggtcaggtat tggtatgccg gggcggttcg tgtacgcgtg ccgtctgctt tgcggacttg
    23341 ttgcgtgcct gagccgagtc gtacaaagta ggggaagcgg tcggtatcga ggtaggcatt
    23401 ggcctttggc tggccgtttc caagcaaggg tacgctgctg agtgcggtag gtgagatttc
    23461 ggtaaccagt ttgttgaggc ggggaaggtg gtagtcgtag tccgggtgcg ggttgcgtga
    23521 tacgaggcgg taggtatagg cttgttcttc tggattttgg gtgtcgttgc cgaattgtat
    23581 ggaaccgtag ccgacgttgt gtttgacact gttgacgtat tgggggtgaa tcagggtggc
    23641 gatggcggtt tgccggttgc tgactcggaa gtcgggcatg gggatgccgt tgagaaccct
    23701 gcctaatatt ttgccttgct tgtcttggat ggaaatattg cttgcaccta cggcgaacgc
    23761 gcctttattt tcggcaaagt cgcgaaaata ttggtaatcg acatcgttgc ggacaatgga
    23821 tgagtaagca ggggaaacgg caaaaagacc gagggtggac aatacggaac aaaatggggt
    23881 ggtgtgtgtg aagcgcatga tgattatccg tgtaatagag aaaatcaacg attcttgcgg
    23941 acaagaatca ccgatcccgt tttgtgctgg atttatatag tggattaaca atatagtgga
    24001 ttaacaaaaa ccagtacagc gttgcctcgc cttgccgtac tatctgcggc ttcgtcgcct
    24061 tgtcctgatt taaattcaat ccactatatt atatattttg tttttgtttg attataaggc
    24121 aacggtgtcc tttcgtctat tggcgatgat tgtatgattt tatttaagat tttaataaaa
    24181 atcctaggaa tggctgcgtt ttcccgttgt tttatttcgt ccggtattgg tttttaagtt
    24241 cacgcagcgc gacaaaggta tcgaggctgc tgtttaacgt tttcccgctc aatgcctcgg
    24301 cgcggtctct gacgtgcggc aggtcgacgc gcaaaaacgg attgacgcgg cgttcgtgcg
    24361 cgagggtaac gggcagggta ggcgtatgcg ccgccgcttt cagtgccgtc tgaatgtcgg
    24421 cgttgtccgg ctcgatatgg gcggcaaaat ccaggttggc ggcggtgtat tcgtgtgccg
    24481 ggtagaacag ggtgttttca ggcaggcggt tgaagcgttg gaagctgtcg taaagctgtt
    24541 cgattgtgcc ggtaaacacg cgtccgcagc cggcggaaaa cagggtgtcg ccgcaaaaga
    24601 cgtgtatgcc gtctgaagtt tccataaggt agctgatgtg gcggtcggta tggcccgggg
    24661 ttgcccaaac ggtgattaac ccttcgccga aggtaaattg ggtgcctgcg gttacggtgt
    24721 gggttgccgc ttcgatgtcg gattcgccgt aaacgggcga ttccatgtag ccgcgccaga
    24781 gtgccgccgc accgccttcg tggtcggggt gggggtgagt tacccatgtt tgggcaagca
    24841 tgaggcggtt gcggacgagg aattccaaga cgggcgaggg ttcggaaggg tcgacgcaga
    24901 cggcatggtt gccgtgctgt atcatccaga tgtagttgtc ggttagggct ttgacggggg
    24961 tgattttcat gagtgttcct cggtggacgg ataccgttta aaggatggta tgccagaacg
    25021 ccgtctgaaa tattcttcag acggcattgg tttgagtagg gcggttagcc caaggcttta
    25081 cgtgcgccgg caaagaggcg gtaccagccg gacagttccg tccagccttc cggtttccag
    25141 ctcatttgtg cggcgcggta cacgcgttcg gggtggggca tcatgatggt cacgcggccg
    25201 tcggcgttgg taatgccggc gatgccttgc ggcgagccgt tggggttgag cggataggtt
    25261 tgggtaactt ggttttgacc gtccacatat tgcagcgcaa tgcccaaatc ggcggaaata
    25321 ttgccgccgt gaagcgcgaa gtcggcgcgg ccttcgccgt ggctgacgac gacgggcagg
    25381 ctggagcctt gcatttcgtt cagaatcagc gacgcggatt tggggacatg aaccatgctc
    25441 aggcgcgctt cgaactgttc gctcaggttg cgcttgaact tcggccagcc tgccgtgccg
    25501 gggatgattt cggcgaggtt gctgaccatc tggcagccgt tgcacacgcc caatgtcagc
    25561 gtgttcgggt cggtgaagaa ggcggcgaac tggtcgtgta aggcggggtg gaacaggatg
    25621 gatttcgccc agccttcgcc cgcgccgagt acgtcgccgt agctgaagcc gccgcacgcc
    25681 gccagcattt tgaagtcggc aaggcggaaa cggcctgcca tcaggtcgga catatgcacg
    25741 tcgtaagcat cgaatccggc gcgggtgaag gcggcggcca tttcgatttg cccgttcacg
    25801 ccctgttcgc gcaggatggc gattttgggt ttcgcgccgc tgttgataaa cggcgcggcg
    25861 atgtcttcgt tcacgtcgaa tttcaggttg gcaaacaatg cgctgcggtc gttgtcgcca
    25921 atcagggcaa actcgctgtc ggcgcaggca gggttgtcgc gcaggcgttg gatttgatgg
    25981 ctggtttctt gccaggtttg ttgcagtttg attaggttgt cagaaataag gtgcgtttgc
    26041 ccgtcgcgga tgattaacgt gttctcatca gttaacgtac cgatttcaaa gacattatga
    26101 tgcagctgtt gttgatagaa taaattgata atatcggcaa catcttgttt tctaacttgg
    26161 ataacagcac ccaactcttc attaaataat gtgcgggcaa tggtttcttg ccattcagcc
    26221 aacgctttta cctcttcagt ccgcaatgat tgagacagag cggtatggtt ggtaataaat
    26281 gtttgtgcaa gcaataaatt taaatctata tccaagccgc accgccctgc aaacgccatt
    26341 tctaccaaaa cggcaaacaa gccgccgtcg ctgcggtcgt ggtatgccaa gagtttgtct
    26401 tcggcgacaa gctgttgaat cacgttgtaa aacgctttca gacggcctgt gtcgtccaaa
    26461 tcgggcgcgt cgccgctcat gttgttgtat acctgaccga atgcagagcc gcccatacgc
    26521 gctttgccga agcccaaatc gacaaacagc aatacgctgt cctcgacgtt tttcaattcg
    26581 ggcgtaacgg ttttgcgtac gtcttgaacc ggcgcgaacg cggagataat caggctcaac
    26641 ggcgaaacga cggatttctt gtccgcgcca tcctgccaaa cggttttcat cgacaggctg
    26701 tctttgccca cggggatgct caaatccagt gcctgacagg ctttagaaac cgcttcgacg
    26761 gtgcggtaga gtttttcgtc ttcgccttcg ttgccgcacg ccgccatcca gttggcggag
    26821 agcttgatgt tgccgatgtc gccgatgttg accgccgcga tgttggtgat ggcttcgccg
    26881 acgcacattc tgcccgaagc aggcgcgtca aacagggcga cggtcggttt ttcgcccata
    26941 gacatcgctt cgccgcgata ggtgttgaag cccatcatgg taacggcgca atcggctacg
    27001 ggggtttggt atttgccgac catttggtcg cggtgggtca tgccgccgac gctgcggtcg
    27061 ccgatggtaa tcaggaagtt tttggcggct acggcaggca ggcgcaaaac gcggtaggcg
    27121 gcttcggtga tgtcgatatc gtcggcgtga aacggttttt tagatggcgt aactgttttg
    27181 tcggtacgcg tggttttggg cggtttgccg agcaagacgt tcaacggcaa atcgatgggg
    27241 ttgttggcga acaaatcgtc gcgcactttc aaatgaccgt cgtcggtcgc tgtaccgacc
    27301 acggcaaacg ggcagcgttc gcgttcgcag atggcgcgga aggtatccaa atctttttcc
    27361 aaaatcgaca agacataacg ctcttgcgat tcgttgcacc agatttgcaa aggcgttaaa
    27421 ccgtgttctt ccaacggcac ttcgcgcagc tcgaataccg cgccgcgtcc ggcatcgttg
    27481 accagttcgg ggaaggcgtt ggacaaacct cctgcgccca cgtcgtggat ggagataatc
    27541 gggtttttgt cgccgagctg ccagcagcgg tcgatgactt cttgcgcgcg gcgttcgatt
    27601 tcggggttgc cgcgttgtac ggagttgaag tctaaagaag cgtcgttcgt gccggtatcc
    27661 atcgaagaag ccgcgccgcc gcccaagccg ataagcatgc ccgggccgcc cagttggatc
    27721 agcaacgcgc cttcggggat ttcgtcttta tgcgtctgct gcgcctgaat gctgcccaag
    27781 ccgccggcaa tcataatcgg tttgtggtag ccgcgaacct gaccgtcaaa tttttcttca
    27841 aaagtgcgga agtagcccaa gaggttcggg cggccgaatt cgttgttgaa cgccgcgccg
    27901 ccgatggggc cttcgatcat gatgtccagc ggcgaggaaa tatgttccgg cttgccgtag
    27961 tcttgttccc acggctgttt gaggtcgggg atgttgaggt tggacacggt aaagccggtc
    28021 aagcctgctt tcggacgcga acctttgccc gttgcgcctt cgtcgcggat ttcgccgccc
    28081 gcgcccgttg ccgcgcccgc aaacggcgcg atggcggtcg ggtggttgtg cgtttccact
    28141 ttcatgatga tatgcgtgtc ttcctcgtgg aaacggtagc cttggttttc cgccgcattc
    28201 ggatagaaac gctcgatttt cgcgccttca atcacggacg aattgtcttt ataggcgacg
    28261 accgtacctt cgggatgcgc gttgtgcgtg tcgcgtatca taccgaacag ggatttcggc
    28321 tgtttttcgc cgttgaggat gaagtcggcg ttgaagattt tgtggcggca gtgttcgctg
    28381 tttgcctgcg cgaacatcat caattcaaca tcggacggat tgcgctgcaa agcctgatag
    28441 ttttcaacca gataatcgat ttcgtcggcg gagagtgcca agcccatttc ggtattggct
    28501 ttgaccaaag cctctttacc gccgcccaaa acatcaacgg tggaaaaggt ttcggattcg
    28561 agatggtgga ataatttgga tgccgtctga aaatcgggca gcacggattc ggtcatgcgg
    28621 tcgtgcagca acgccgccca ttgctgtttc tcatcgtcgt tcagacgacc ttccagccac
    28681 actgccatgc cgcgctcgat gcgttcgatg cctgccaaac cgcagttttc cgcgatattg
    28741 gtcgccttgg aagcccacgg cgaaatcgta cccaaacggg gcgttaccaa aaacaaatgc
    28801 aagccctcgc gcgcttttgg cgtttgttca acgctttgcg ccgccaacaa ggcttgcagt
    28861 ttttcgacag tcgcggcatc caatgctttc tcgctgccgg cgaaatacca aaattcgctg
    28921 cttaatttga cttcgggcag tccgagtgcg gcggcttttt gcaagagttt ttcgacacgg
    28981 aaatcggaaa gggcggtaac gccgcgcaag ggcaaaacga cagacatgga ttcggctctc
    29041 aaatgcggtt ggaaaatctg tcattatacg cgcaacgggg ctgtattgct tgggtatttt
    29101 ggcttaaaat gttgacaatc ttcagacggc atacagttgg ggaaaataca ggtgccgtct
    29161 gaagatatta aggaataagg gttttatctg tttttctgat ttttacccaa agccgggtat
    29221 gcggataatt gcaggaagta gaggggcggg caactgcttc cgtatgtttt tagatcaaat
    29281 gccgtcgttt ccgtacggtt aggaatatgg aagtttggat ttacagaaac ctttaaatat
    29341 tgctgaaatg cagagatcgg gattcccgcc tgcgcgggaa tgacggtttc cggcaaatcg
    29401 ccgcatcgcc gggcgaacag taccgtttat cgtttgccgg cggtttctgc tatatttgtc
    29461 gtttgtttac gttaattaat ggagaatgtg atgaaaaaaa tcgaggcgat tgtcaaaccg
    29521 ttcaaactcg acgacgtgcg cgaggcgttg acggaaatcg gcattacggg gatgaccgtc
    29581 agcgaggtca aagggttcgg caggcagaag gggcatacgg aaatctatcg cggtgcggaa
    29641 tacgccgtcg atttcctgcc caaggtcaaa atcgagctgg tgttggcgga tgacgctgtg
    29701 gaacgcgcga ttgacgtgat tgtcgaggtg gcgtgttcgg gcaaaatcgg cgacggcaag
    29761 atttttgtgc tgccggtcga ggaggcaatc cgtatccgca cgggcgaacg tgcggacgca
    29821 gcagtctgac ggccggatag aaaataaaaa ccgcagcctt gcagggctgc ggtttcttta
    29881 tcgggagatg ctgcttacca ctcgtaattg acgccgacat ggtaggctgc ggaagaaccg
    29941 gacgaagtgc cgactgccac gcctgctttg gcggcaaagt tttcggtaaa gcggaagccg
    30001 gtaccgatgg cgactgccga ttcggatttg tagccgccga ctgcagccgt tacattgaac
    30061 cgacccacgt tgtaaggttg gaacagaccg gagagcgcgg cttgttctgc aaggccttgg
    30121 cgggtttctt tgcgcaggtc tgacactgtt ttatccaaac cgttcaggcg agtatcgtga
    30181 tcggcaatgg atttttcagc agaagccaag cgtgtgtcca atttttcggt agtagcgttc
    30241 agaccatcaa ttctgacaaa tttgctgtca gactcttctc tggtgtacac gtcggcactg
    30301 tttgcttttt tagcaatatt atctttgttc gtagcgatat cagctttgat gtcggtaact
    30361 tttgcagcga cagcttcggc cttgtcggct gcagtattag ctgtgccagc ggcagcttcg
    30421 gctttgcctg ctgcagtttc tgcagctttt actttggcat cgacgttttg tttggtttct
    30481 tcggccgtct gtttggcttc attggcggtt ttgacggctt cgtctgcctt agtgttggtt
    30541 tcatccaatg aatcggcgat atcgttgaat gcttcggcat gcttgtcgac ggtatcagcc
    30601 acggc
//
LOCUS       DAWKJW010000007        29295 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.007, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000007 DAWKJW010000000
VERSION     DAWKJW010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 29295)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29295)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29295
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.007"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            183..539
                     /locus_tag="WJJ54_000250"
     CDS             183..539
                     /locus_tag="WJJ54_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEZ7341167.1"
                     /translation="MLSAYFPVFVFILIGLAAGVLFILLGTILGSKRHYAEKDAPYEC
                     GFEAFENARMKFDVRYYLVAILFILFDLEVAFMLPWAVVFKELGAYGFWSMLVFIVVL
                     TVGFVYEWKKGALEWE"
     gene            530..1012
                     /locus_tag="WJJ54_000251"
     CDS             530..1012
                     /locus_tag="WJJ54_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HEZ7341168.1"
                     /translation="MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMH
                     AGMARYDLDRFGIIFRPSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE
                     "
     gene            1025..1618
                     /locus_tag="WJJ54_000252"
     CDS             1025..1618
                     /locus_tag="WJJ54_000252"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEZ7341169.1"
                     /translation="MASIQNLYETVVGVLGDQASKVISALGEITVECLPEHYISVMTA
                     LRDHEELHFELLVDLCGVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDD
                     FPVVESVVDIYNSADWYEREAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGY
                     VEMRYDEEQKRVIYQPVTIEPREITPRIVREENYGGQ"
     gene            1608..2864
                     /gene="nuoD"
                     /locus_tag="WJJ54_000253"
     CDS             1608..2864
                     /gene="nuoD"
                     /locus_tag="WJJ54_000253"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HEZ7341170.1"
                     /translation="MANKLRNYTINFGPQHPAAHGVLRMILELDGEQIVRADPHIGLL
                     HRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMF
                     AEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGV
                     YRDLPDFMPKYEGSKFRNAKVLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDN
                     RIWKQRTVGIGVVSPERAMQKGFTGVMLRGSGVEWDVRKTQPYEVYDKMDFDIPVGVN
                     GDCYDRYLCRMEEMRQSVRIIKQCSEWLRVNPGPVITTNHKFAPPKRTEMKTGMEDLI
                     HHFKLFTEGMHVPEGETYTAVEHPKGEFGVYIISDGANKPYRLKIRAPGFAHLQGMDE
                     MAKGHMLADVVAIIGTQDIVFGEVDR"
     gene            2864..3337
                     /gene="nuoE"
                     /locus_tag="WJJ54_000254"
     CDS             2864..3337
                     /gene="nuoE"
                     /locus_tag="WJJ54_000254"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HEZ7341171.1"
                     /translation="MLSAESLKQIDTELAKYPADQRRSAIMGALRIAQTEKGWLAPET
                     IAFVADYIGITPAQAYEVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMATGEYLKQK
                     LGIGYGETTPDGKFTLVEGECMGACGDAPVMLVNNHSMCSFMTEEAIEKKLAELE"
     gene            3727..5028
                     /gene="nuoF"
                     /locus_tag="WJJ54_000255"
     CDS             3727..5028
                     /gene="nuoF"
                     /locus_tag="WJJ54_000255"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEZ7341172.1"
                     /translation="MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSENIS
                     QTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDII
                     MFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGS
                     DFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTET
                     FSSVSFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVLKMAGG
                     MRGGKKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVK
                     ALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDSVGNQMAGRT
                     ICALADAAVFPVRSFTKHFRDEFVHYIEHGGPMKEHKWGGW"
     gene            5028..5465
                     /locus_tag="WJJ54_000256"
     CDS             5028..5465
                     /locus_tag="WJJ54_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341173.1"
                     /translation="MVEAKIFILYGAANKGKSTTLNTLFNQICWKFSKFLVFFERHGN
                     GLDFVAVFDHEGQRIGFYSSGDNEYEVRRNLYKLYSHNCDFIFGTSRTRGGSCDAVGC
                     YAELLHGDVNIINWCEKFEPTDEDNERAVKELFKSFKNIINEL"
     gene            5755..8016
                     /locus_tag="WJJ54_000257"
     CDS             5755..8016
                     /locus_tag="WJJ54_000257"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HEZ7341174.1"
                     /translation="MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAAN
                     CRMCLVDVEKAPKPLPACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCD
                     QGGECQLQDLAMGYGKTTSRYTEEKRSVVGKDMGPLVSAEEMSRCIHCTRCVRFTEEI
                     AGVQEIAMANRGEHSEIMPFIGKAVETELSGNVIDLCPVGALTSKPFRFNARTWELNR
                     RKSVSAHDALGSNLIVQTKDHTVRRVLPLENEAINECWLSDRDRFSYEGLYHESRLKN
                     PKIKQGGEWMDVDWKTALEYVRSAIECIAKDGNQNQVGVWANPMNTVEELYLAKKLAD
                     GLGVKNFATRLRQQDKRLSDDLNGAQWLGQSIESLADNDAVLVVGANLRKEQPLLTAR
                     LRRAAKDRMALSVLASSKEELFMPLLSQEAVHPDEWAGRLKNLSADAEHAVTASLKNA
                     EKAAVILGAEVQNHPDYAAIYAAAQELADATGAVLGILPQAANSVGADVLNVNSGESV
                     AEMANAPKQAVLLLNVEPEIDTVDGAKAVAALKQAKSVMAFTPFVSETLLDVCDVLLP
                     IAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPMWKVLRVLGNLFDLKGFEYHDTAAI
                     LKDALDAESLPSKLDNRSTWTGEGVQTASDRLVRVGGVGIYHTDSIVRRSAPLQETSH
                     AAVPAARVNPNTLARLGLQDGQIAVAKQNGASVSVAVKADAGLPENVVHLPLHTENAA
                     LGALMDTIELAGA"
     gene            8019..9095
                     /gene="nuoH"
                     /locus_tag="WJJ54_000258"
     CDS             8019..9095
                     /gene="nuoH"
                     /locus_tag="WJJ54_000258"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEZ7341175.1"
                     /translation="MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVA
                     YLTYFERKVIGFMQLRVGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPI
                     MSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGA
                     MRASAQSISYEIAMSAALVCVVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIF
                     IVYLISAVAETNRAPFDVAEGESEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSL
                     MFLGGWLSPFPQSWGFIGTPSAFWMFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKV
                     LIPIGFAYIVVLGVWMISPLNLWK"
     gene            9176..9655
                     /gene="nuoI"
                     /locus_tag="WJJ54_000259"
     CDS             9176..9655
                     /gene="nuoI"
                     /locus_tag="WJJ54_000259"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEZ7341176.1"
                     /translation="MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRF
                     RGLHAQRRYPNGEERCIACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFC
                     GFCEEACPTDAIVETHIFEYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR"
     gene            9686..10393
                     /locus_tag="WJJ54_000260"
     CDS             9686..10393
                     /locus_tag="WJJ54_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341177.1"
                     /translation="MEGLINALKYLAEHEPIDNFEEIRTRNSPIELPSGLSNFEQNIF
                     LKENLSPKLQNDDSLKTHYWIIREWGGIKSFKQSAENSQLIRQFLSELNSGKLSSGLL
                     KISSLSKLASFIDCERFAIYDSRAIFSLNWLLFKFTNADLFFQPQGRNRELEIRNMNV
                     LFHFSDIKPNYRKPDVSFHQYCGLLQDLAKQVYGKQAKPYHIEMLLFKIATTWICADM
                     DQLIKFDCLRNQDFQTA"
     gene            10429..11100
                     /locus_tag="WJJ54_000261"
     CDS             10429..11100
                     /locus_tag="WJJ54_000261"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEZ7341178.1"
                     /translation="MTFQLILFYIFAVIILYGAIKTVTAKNPVHAALHLVLTFCVSAM
                     LWMLMQAEFLGVTLVVVYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLL
                     AVALILILVNPKTDLAAFGLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMV
                     AAIALVHRKTTNPKRMDPADQVKVRADQGRMRLVKMEAVKPQVESAEESEVSDGLKPE
                     GEGKA"
     gene            11097..11402
                     /gene="nuoK"
                     /locus_tag="WJJ54_000262"
     CDS             11097..11402
                     /gene="nuoK"
                     /locus_tag="WJJ54_000262"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEZ7341179.1"
                     /translation="MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVN
                     FNFIAFSQHLGDTAGQIFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLDELKG"
     gene            11436..12011
                     /locus_tag="WJJ54_000263"
     CDS             11436..12011
                     /locus_tag="WJJ54_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine monophosphate-protein transferase
                     NmFic"
                     /protein_id="HEZ7341180.1"
                     /translation="MPSENPIGKTMKSIDEQSLHNARRLFESGDIDRIEVGTTAGLQQ
                     IHRYLFGGLYDFAGQIREDNISKGGFRFANAMYLKEALVKIEQMPERTFEEIIAKYVE
                     MNIAHPFLEGNGRSTRIWLDLVLKKNLKKVVNWQNVSKTLYLQAMERSPVNDLELRFL
                     LKDNLTDDVDNREIIFKGIEQSYYYEGYEKG"
     gene            12135..12476
                     /locus_tag="WJJ54_000264"
     CDS             12135..12476
                     /locus_tag="WJJ54_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341181.1"
                     /translation="MMDKNQLEQEFHKAMLNIYQEALNLPQPYKATRFLQIVNEFGGK
                     EAADKLLSTGEKKTQTGFTELILSGGGVHALKYSMEYLVLQKPWCDLFTEEQLAVARK
                     RLERVGFVFPK"
     gene            12525..14549
                     /gene="nuoL"
                     /locus_tag="WJJ54_000265"
     CDS             12525..14549
                     /gene="nuoL"
                     /locus_tag="WJJ54_000265"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEZ7341182.1"
                     /translation="MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVS
                     AVLSAYVLWGFLNGSRAKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMV
                     HIYTIGYMHDEKVGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGF
                     YFKRPSATFANLKAFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQ
                     LFPGVEWSLITVTCLILFVGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGL
                     FMVSRMSPIYEMSSTALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTV
                     ALGASAYSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPITWLTM
                     LIGNLSLIGTPFFSGFYSKDSIIEAAKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFM
                     VFHGEEKWRSLPEHHDDHHGEEHHGLGKNDNPHESPLVVTLPLILLAIPSVIIGYVVI
                     EPMLYGDFFKDVIFVNADAHPTMHIMKEEFHGALAMVSHSLHSPVLYLAIAGVLSAWL
                     LYVKLPHLPAKIAQIFRPIYVLFENKYYLDVLYFNVFAKGTRALGTFFWKVGDTAIID
                     NGIVNGSARLVGAIAAQVRKAQTGFIYTYAAAMVFGVLVLLGMTFWGLFR"
     gene            14764..15084
                     /locus_tag="WJJ54_000266"
     CDS             14764..15084
                     /locus_tag="WJJ54_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin"
                     /protein_id="HEZ7341183.1"
                     /translation="MSNTQTICSADFTASRAWGALDIANMNGTTVRLHWTDQPYKWHV
                     NDGEEVFAVMDGEVDMHYRENGEEHIARLRSGDIFYAGIGAEHVAHPRGETRILVIEK
                     EGSV"
     gene            15159..16874
                     /locus_tag="WJJ54_000267"
     CDS             15159..16874
                     /locus_tag="WJJ54_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HEZ7341184.1"
                     /translation="MANLNVSSKKIINLLGNQDMQEKYFIIPEYQRPYRWDTEKCAVL
                     WSDIVDFRQSSTGKNEEYFLGTIVVCPNEKGNLEVIDGQQRLTSLLLLLRAFYRVLEQ
                     TESTPDTAAKITTLKSKIAPCIWDVDVLTAEITDRTAIRLHTQVATETDNEILHEILA
                     NGEISEECRSNYAVNYLYFLKQCQEYARTNPMDWYHLCLTILNDCILLPIESDSLNSA
                     LTIFSTLNDRGLPLSDADIFKARLYKMAQQKDKFVEQWKELVALAEGASISVDDLFRY
                     YTHVLRAKEKITDKEIGLRRFYTDNRNKQLENENLFNHLIELAGFWQDINNSKTNQDV
                     ETSNFVNDEAAKWLQCLNVYPNEFWKYAASVFFIANKGAQSFKDDFAALLKQLTAFLY
                     AKFLVAPTVTAIKDDIYKLCVAIYHGEKNALSYVMPAPIHYEQNTGRITKGLLMINAY
                     LFDEKQKLLPTKTEIEHIFPKKWQETNYNGWSIIDAEQYLEQLGNKIVFEKRLNIQAG
                     NGYFGKKKEQYQKSDIVEVRELAGENANDWLPSDIQKRQQQIVDRLKQFFDNCFEAAS
                     IPKKN"
     gene            16911..18407
                     /locus_tag="WJJ54_000268"
     CDS             16911..18407
                     /locus_tag="WJJ54_000268"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEZ7341185.1"
                     /translation="MFSNHLLSLAIWIPIAAGVLVLATGSDSRALLARVLAFMGALAG
                     FLVTLPLFTGFDRLSGGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVL
                     AGWEVIQKRPAQYMAAFLMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPR
                     RVYASVKLFLYTLMGSLLMLVAMVYLYYQTGSFSIVDFQNIKQIPLGVQQLLFVAFFL
                     SFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA
                     PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVDGQLDDWALKG
                     AIIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGL
                     PATSGFVGEFMVIMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIYGAIHNPHVAEM
                     KDINCREFAILAILAVVVLGMGLYPQAFIEVVHQAANDLIAHVAQSKI"
     gene            18417..19862
                     /gene="nuoN"
                     /locus_tag="WJJ54_000269"
     CDS             18417..19862
                     /gene="nuoN"
                     /locus_tag="WJJ54_000269"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HEZ7341186.1"
                     /translation="MNWSDLNLMPAMPEVALLSLLVLLLLADLWVSDDKRRWTHYGAL
                     ATVAVTAVVQLAVWEQGSTSSFNGMYIADGMSRLAKMVLYALTFALFVYAKPYNQVRG
                     IFKGEFYTLSLFALLGMSVMVSAGHFLTAYIGLELLSLALYALIALRRDSGFAAEAAL
                     KYFVLGALASGLLLYGISMVYGATGSLEFAGVLASSFNEEANEWLLKLGLVFIVVAVA
                     FKLGAVPFHMWVPDVYHGAPTSVTALVGTAPKVAAVVFAFRILVTGLGTVHHDWSLMF
                     ALLAAASLLVGNLAAIMQTNIKRMLAYSTVSHMGFILLAFMAGAVGFAAGLYYAITYA
                     LMAAAGFGVLMVLSDGDNECENISDLAGLNQHRVWLAFLMLLVMFSMAGIPPLMGFYA
                     KFGVIMALLKQGYVWLSVFAVVMSLIGAFYYLRVVKVMYFDESGRARPTVGGNNAAKF
                     LLSVNALLLVLWGIMPQTVIDWCAKALENTL"
     gene            19974..20273
                     /locus_tag="WJJ54_000270"
     CDS             19974..20273
                     /locus_tag="WJJ54_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2818 family protein"
                     /protein_id="HEZ7341187.1"
                     /translation="MTASMYILLLLALIFANAPFLTTKLFGIVPLKRKHFGHHLIELA
                     AGFALTAVLAYILESRAGAVHDQGWEFYATVVCLYLIFAFPCFVWRYFWHTRNRE"
     gene            complement(20364..21260)
                     /locus_tag="WJJ54_000271"
     CDS             complement(20364..21260)
                     /locus_tag="WJJ54_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEZ7341188.1"
                     /translation="MNPTNDLKAWQQRAQAQTELLLERFLPSENEIPHTLHEAMRYAV
                     LDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGK
                     PTCHIKYGEATALLVGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQ
                     AIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLG
                     LAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALL
                     EPFGGKALRLRQLAEFAVARKY"
     gene            complement(21244..21468)
                     /locus_tag="WJJ54_000272"
     CDS             complement(21244..21468)
                     /locus_tag="WJJ54_000272"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEZ7341189.1"
                     /translation="MKKNAPKSFEEALSRLESLTQSMQGEMPLEDALAAYQEGNELVR
                     YCQTKLAQVEQKLQVLDADGLKELNLESDE"
     gene            complement(21466..21552)
                     /locus_tag="WJJ54_000273"
                     /pseudo
     CDS             complement(21466..21552)
                     /locus_tag="WJJ54_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233463.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
     gene            complement(21580..22503)
                     /gene="rsgA"
                     /locus_tag="WJJ54_000274"
     CDS             complement(21580..22503)
                     /gene="rsgA"
                     /locus_tag="WJJ54_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEZ7341190.1"
                     /translation="MPSEHPFSDGISTPNPKETMNDTAQITASYGRRYIVRTPDGTTY
                     EASTRKKRVDFACGDRVRISPVNAEQVVIEDFLPRQSLLYRQDAWKTKLIAANVTQLL
                     IVTAAVPSPSVRLLQRALLAAEAAGIEAVIVLNKADLPETALWREKLKFYETLGYPVI
                     ETRALENADLLRPVLQGHSNILLGQSGMGKSTLTNALLGSQTARTGDISAALDSGKHT
                     TTHARLYDLNGETQLIDSPGLQEFGLHHLQAADLPRYFPDFRHLVGQCRFHNCTHRAE
                     PGCAFKAAAQTGKIRTERLTFLQRITDDLLK"
     gene            complement(22508..24364)
                     /locus_tag="WJJ54_000275"
     CDS             complement(22508..24364)
                     /locus_tag="WJJ54_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ7341191.1"
                     /translation="MLNKIFSWFESRIDPYPEAAPKTPEKGLWRFVWSSMAGVRKWIA
                     ALAALTAGIGIMEALVFQFMGKIVEWLGKYAPAELFAEKGWELAAMAAMMVFSVVWAY
                     AASNVRLQTLQGVFPMRLRWNFHRLMLNQSLGFYQDEFAGRVSAKVMQTALALRDAVM
                     TVADMVVYVSVYFITSGVILASLDSWLLLPFIGWIVGFASVMRLLIPKLGQTAAWQAD
                     ARSLMTGRITDAYSNIATVKLFSHGAREAAYAKQSMEEFMVTVRAQMRLATLLHSCSF
                     IVNTSLTLSTAALGIWLWHNGQVGVGAVATATAMALRVNGLSQYIMWESARLFENIGT
                     VGDGMATLSKPHTILDKPNALPLNVPQGAIKFEHIDFCYEAGKPLLNGFNLTIRPGEK
                     VGLIGRSGAGKSTIVNLLLRFYEPQSGTVSIDGQDISGVTQESLRAQIGLVTQDTSLL
                     HRSVRDNIIYGRPDATDAEMVSAAERAEAVGFIPDLSDAKGRRGYDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAIQESLDKMMDGKTVIAIAHRLST
                     IAAMDRLVVLDKGRIIEEGTHAELLEKRGLYAKLWAHQSGGFLNEHVEWQHD"
     gene            complement(24390..24527)
                     /locus_tag="WJJ54_000276"
     CDS             complement(24390..24527)
                     /locus_tag="WJJ54_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341192.1"
                     /translation="MPPEGGAAFALTKPCVSASRCLPDGFSRKMALLSFLSDGIVFDA
                     V"
     gene            complement(24527..25111)
                     /gene="ruvA"
                     /locus_tag="WJJ54_000277"
     CDS             complement(24527..25111)
                     /gene="ruvA"
                     /locus_tag="WJJ54_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEZ7341193.1"
                     /translation="MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGES
                     VQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGGIGAKTALGILSAMTADELARAV
                     AEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
                     LGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK"
     gene            complement(25193..25519)
                     /locus_tag="WJJ54_000278"
     CDS             complement(25193..25519)
                     /locus_tag="WJJ54_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ7341194.1"
                     /translation="MNIKHLLLTAAATALMGISAPALAHHDGHGDDDHGHAAHQHSKQ
                     DKIISRAQAEKAALARVGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVI
                     SSRRDD"
     gene            complement(25581..26300)
                     /locus_tag="WJJ54_000279"
     CDS             complement(25581..26300)
                     /locus_tag="WJJ54_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEZ7341195.1"
                     /translation="MTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKV
                     AGKRYTPKNQVAEFTQTGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRV
                     TNTKNGKSVIVRVNDRGPFHGNRIIDVSKAAAQKLGFVSQGTAHVKIEQIVPGQSALV
                     AENKDIFIDLKSFGTEHEAQAYLNQAAQNLASSASNPNLSVEKRHYEYVVKMGPFSSQ
                     ERAAEAEAQARGMVRAVLTAG"
     gene            complement(26297..26419)
                     /locus_tag="WJJ54_000280"
     CDS             complement(26297..26419)
                     /locus_tag="WJJ54_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HEZ7341196.1"
                     /translation="MPSENLSGHIPNRRPHCTAVRNVSGGHDAHSSSTQERNTF"
     gene            complement(26430..26894)
                     /gene="trmL"
                     /locus_tag="WJJ54_000281"
     CDS             complement(26430..26894)
                     /gene="trmL"
                     /locus_tag="WJJ54_000281"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HEZ7341197.1"
                     /translation="MFTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKM
                     KRAGLDYHEFASLTVHENFDDCLKALAGRRIFALTTKGTARPDETAFQKGDVLLFGPE
                     TRGLPADILDSLPAAQKIRLPMQPGSRSMNLSNTVAVILFEAWRQHGYAGGV"
     gene            complement(26959..27456)
                     /locus_tag="WJJ54_000282"
     CDS             complement(26959..27456)
                     /locus_tag="WJJ54_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEZ7341198.1"
                     /translation="MWASLHYEPPVSNMIHALKHLADLSMVQPLADLMMQNPPDRLAD
                     ECFDFVLPVPLSRERLLQRGFNQSESIVGLLAQRYGWQILPRHTVFRHHRPPQSTLKG
                     GERRRNIKNAFEIRTPIPENCNILLIDDVFTTGATLDELAKTLKKSGANRICCWTLAR
                     TPMKK"
     gene            27551..28426
                     /gene="bioH"
                     /locus_tag="WJJ54_000283"
     CDS             27551..28426
                     /gene="bioH"
                     /locus_tag="WJJ54_000283"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HEZ7341199.1"
                     /translation="MRYAAKSSRQPAQMPSETPDEPWHNTQRLIVGASAMRRQQERKS
                     MPDAVKKVYLIHGWGANRHVFDDLMPRLPATWPVSAVDLPGHGDAPFAQPFDIEAAAD
                     AVAAQIDTPADILGWSLGGLVALYLAARHPDKVRSLCLTASFARLTAAEDYPEGLAAP
                     ALGKMVGAFRSDYAKHIKQFLQLQLLHTPDADGIIGRILPDLARCGTPQALQEALDAA
                     ERADARHLLDKIDVPVLLVFGGKDAITPPRMGEYLHRRLKGSRLVVMEKAAHAPFLSH
                     AEAFAALYRDFVEGV"
     gene            28428..29213
                     /locus_tag="WJJ54_000284"
     CDS             28428..29213
                     /locus_tag="WJJ54_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEZ7341200.1"
                     /translation="MNHQDARWQVHRHLAEHTDQRLTLVRNAPKYILLAGADADISRS
                     LLAKRYPQAVFEEYDSRADFLAAAAARKGGFWQRFAGKGVVQHCQSPTAPLPEACADM
                     LWSNLGLLAAEQILPVLHNWARALKTDGLLFFTCFGRDTFTELKCRLKENGIESRSVM
                     FPDMHDLGDMLAENGFYDPVTDTAKLVLDYKKAETFWADMDTLGVWRAMAWNDENAAR
                     SCVGTIFEREGGLSITLETVYGHAVKKLMLPQGENVVQFFPKR"
BASE COUNT         6676 a         7194 c         8004 g         7421 t
ORIGIN      
        1 acgaattacg gtgtaaaaat ttatatgacc ttataaaatc aaataagaat cgttatcata
       61 acatgattgt atttattggg tttttttggg cgttttgccg atatttacct tttaatggtt
      121 tttgaaattc gctaaaatac gaaattattg tagaaatttt gttaacggat ttgggtgtaa
      181 ccatgttgtc cgcttacttt cccgtctttg tctttatcct catcggcctc gcggccggcg
      241 tactgtttat cctgctcggc acaattttgg gctcgaaacg tcactatgcc gaaaaagacg
      301 caccttacga atgcggtttt gaagcctttg aaaacgccag gatgaagttc gacgtgcgct
      361 attacctcgt cgccatcctc tttatcctgt ttgatttgga ggtcgcgttt atgctgccgt
      421 gggcggtggt gtttaaagaa ttgggcgcgt acggcttctg gtctatgctg gtgtttatcg
      481 tcgttctgac ggtaggcttt gtttacgaat ggaaaaaagg tgcgctggaa tgggaataga
      541 aggcgttttg aaaaaaggtt tcatcaccac cagcgcggat acggtgttga actatatgcg
      601 taccggttca ttgtggccgg ttactttcgg cttggcctgc tgcgccgtgg aaatgatgca
      661 cgcgggtatg gcgcgttatg accttgaccg cttcggcatc attttccgtc cgtccccacg
      721 tcaggccgac ctgatgattg tggcaggtac gctgaccaat aaaatggcgc ccgccctgcg
      781 ccgcgtatac gaccagcttg ccgagccgcg ctgggtattg tctatgggct cgtgtgccaa
      841 cggcggcggt tattatcact attcttattc cgttgtgcgc ggtgccgacc gcgtcgtgcc
      901 ggtagatgtt tatgtgccgg gttgtccgcc gactgcggaa gccctgattt acggcctgat
      961 tcagctccaa caaaaaatca agcgcacttc caccatcgcg cgtgacgagt aaggagagga
     1021 cgatatggca agcattcaaa acttatacga gaccgtcgtc ggtgtgcttg gcgatcaggc
     1081 aagcaaagtc atttcagctt tgggcgagat taccgtcgag tgtctgcccg aacactatat
     1141 ttccgtcatg accgcattgc gcgaccatga agaactgcat tttgagcttc tggttgactt
     1201 gtgcggtgtc gattacagca cttacaaaaa cgaagtatgg cagggcaaac gcttcgccgt
     1261 cgtcagccag cttctttccg ttaaaaacaa tcagcgcatc cgcgtacgcg tctgggtttc
     1321 agacgacgac ttccccgtgg tcgaatccgt cgtcgatatt tacaacagcg cggattggta
     1381 cgaacgcgaa gccttcgata tgtacggcat tatgtttaac aaccacccgg acttgcgccg
     1441 catcctgacc gattacggtt tcgttggaca tccgttccgc aaagacttcc cgatttccgg
     1501 ctatgtggaa atgcgttacg acgaagagca aaaacgcgtg atttaccaac ctgttaccat
     1561 cgagccgcgc gagatcacgc cgcgtatcgt ccgtgaggag aactacggtg gccaataaat
     1621 taagaaacta caccatcaac ttcggcccgc aacaccctgc ggcgcacggc gtattgcgta
     1681 tgattttgga gttggacggc gaacaaatcg tccgtgccga cccgcatatc ggcctcctgc
     1741 accgcggtac tgaaaaactg gctgaaacca aaacctatct gcaagccctg ccttatatgg
     1801 acaggctgga ctacgtttcc atgatggtca acgagcaggc atactgcttg gcggtagaaa
     1861 aactcgccgg aattgatgta cctatccgcg cccaatacat ccgcgtgatg ttcgccgaag
     1921 taacgcgcat cctcaatcac ttgatgggca tcggttcgca cgcattcgac attggtgcga
     1981 tgaccgccat cctttatgcc ttccgcgacc gcgaagagtt gatggacttg tacgaagccg
     2041 tgtccggcgc acgtatgcac gcagcctact tccgtcccgg cggcgtttac cgcgacctgc
     2101 ccgacttcat gcccaaatac gagggcagca aattccgcaa tgccaaagta ttgaagcagc
     2161 tcaacgaatc ccgcgaaggc acgatgctcg actttatcga tgccttctgc gaacgtttcc
     2221 cgaaaaacat cgacacactc gaaaccctcc tgaccgacaa ccgtatttgg aaacagcgta
     2281 ccgtcggcat cggcgtcgtc tcccccgaac gtgccatgca aaaaggcttt accggcgtga
     2341 tgttgcgcgg ttcgggcgtg gaatgggacg tgcgtaagac acagccttac gaagtgtacg
     2401 acaaaatgga tttcgacatc cctgtcggcg tgaacggcga ctgctacgac cgctacctct
     2461 gccgtatgga agaaatgcgt caatccgtac gcatcatcaa acaatgttcc gagtggttgc
     2521 gtgtcaatcc gggtccggtc attaccacaa accacaaatt cgctccgccc aaacgtaccg
     2581 aaatgaaaac aggtatggaa gacctgattc accatttcaa actctttacc gagggtatgc
     2641 acgttcccga gggcgagacc tacaccgctg tcgaacatcc gaaaggcgag ttcggcgttt
     2701 acatcatttc agacggcgca aacaaaccct accgcctgaa aatccgcgca cccggcttcg
     2761 cccatctgca aggcatggac gaaatggcaa aaggccacat gctcgccgac gtcgttgcca
     2821 tcatcggtac gcaggacatc gtattcgggg aggttgaccg ataatgttat ccgcagagtc
     2881 cttaaaacaa atcgacacag aactggcgaa atatcccgcc gaccaacgcc gttccgccat
     2941 catgggtgcg ttgcgtatcg cccaaaccga aaaaggctgg ctcgcccccg aaaccatcgc
     3001 ttttgttgcc gactatatcg gcatcacgcc tgcacaagcc tacgaagtcg ccactttcta
     3061 caatatgtac gaccttgagc ctgtcggcaa atacaaactg accgtttgta ccaacctgcc
     3121 ctgcgccctg cgcggcggta tggctaccgg cgaatacctc aaacaaaaac tcggtatcgg
     3181 ctacggcgaa actacccctg acggcaagtt tacccttgtc gaaggcgaat gcatgggcgc
     3241 atgcggcgac gctcccgtta tgctggtcaa caaccacagc atgtgcagct ttatgaccga
     3301 agaagcgatt gagaagaaac tggcggagtt ggagtaggtc gtctgaaacg acgatttaaa
     3361 cgtaggtcgg atacttgtag ccgacagagt gggtaaaaag gcaaaatgtc ggatttaaga
     3421 atccgcccta ctgaaatacc gaaatgccgt cattcccgcg caggcgggaa tccaccggta
     3481 agattcggtt tctgaattta ataagacatt gcttaccatt gaggatggat tcccgcctgc
     3541 gcgggaatga cgacagacaa gcaagtggtc gagatccaac aaaaacgatt aaaggtcgtc
     3601 tgaaaatatc gatttgataa actagatttt atttcagacg acgttacaag ccggtacaca
     3661 aagacatctt aaggtcgtct gaaacagcgg ccgcaaccga tacgaaaaca aacaggcaca
     3721 ccaaaaatgg ctatttacca atcaggcgtg atttttgacc aagtggatac cgccaatccc
     3781 gattgctgga cattggacga atacgtcaaa cgtggcggtt ataccgccct gcgtaaaatc
     3841 ctgtccgaaa acatctcgca aaccgatgtg attgacgaag tcaaaacctc cggcttgcgc
     3901 ggtcgtggcg gtgcgggctt cccgaccggt ttgaaatgga gctttatgcc ccgttctttc
     3961 cccggcgaaa agtacgtcgt ttgcaacacc gacgaaggcg agccgggtac atttaaagac
     4021 cgcgacatta ttatgttcaa cccccatgcc ctgattgaag gcatgattat cgccggttac
     4081 gcgatgggcg cgaaagccgg ttacaactat atccacggcg aaatttttga aggctaccaa
     4141 cgctttgagg ccgctttgga gcaggcgcgt gccgcaggct ttttgggtaa aaatattttg
     4201 ggttcggatt ttgaattcga actcttcgcc caccacggct acggtgcata catctgcggc
     4261 gaagaaaccg cattgcttga atcgctggaa ggcaaaaaag gccagccgcg ctttaaaccg
     4321 ccattccctg cttcgttcgg cctgtacggc aaaccgacta ccatcaacaa taccgaaact
     4381 ttctcctccg tttcattcat tatccgtgac ggcggacagg catttgccga taaaggtatt
     4441 ccgaatgcag gcggtaccaa attattctgt atttccggcc atgtcgagcg tccgggcaac
     4501 tatgaagtgc cattgggcac accgtttgcc gaagtcttga aaatggcagg cggtatgcgc
     4561 ggcggcaaaa aactcaaggc cgttattcct ggcggttcgt ccgcgcccgt attgcctgcc
     4621 gacatcatga tgcagacaaa tatggactac gactcgattt ccaaagcagg ctcgatgctg
     4681 ggttctggcg cgattatcgt catggacgaa gacgtgtgca tggtgaaagc ccttgagcgc
     4741 ctgagctact tctactacga cgagtcttgc ggccaatgta cgccttgccg agaaggcacc
     4801 ggctggcttt accgcatcgt ccaccgcatc gtagaaggca aaggccgcat ggaagatttg
     4861 gatttgctgg attctgtcgg caaccaaatg gcaggccgca ccatctgcgc ccttgccgat
     4921 gccgccgtct tccccgtccg aagctttacc aagcatttcc gtgatgagtt tgtgcattac
     4981 atcgaacacg gcggaccgat gaaagagcat aagtggggag ggtggtaatg gtggaagcta
     5041 aaatttttat tctatacggt gcagccaaca aaggtaagag tacgacactc aatacgcttt
     5101 ttaatcagat ttgttggaaa ttttctaaat ttctagtctt ttttgaaaga catggaaatg
     5161 gcttagattt tgttgcagta tttgatcatg aaggtcagag aattggtttt tattcatctg
     5221 gtgataatga atacgaggtt aggagaaatt tatacaaact ttattcgcat aattgtgatt
     5281 ttatttttgg cacgtcaagg acacggggtg gtagttgcga tgcagtagga tgttatgcag
     5341 agttattgca tggcgatgta aatataatta attggtgtga aaagtttgag cctacagatg
     5401 aagacaatga gcgtgctgtt aaagagttat ttaagtcatt taaaaatata ataaatgagt
     5461 tatagtttta gttggtttta tattggttaa aagcaaaatg ctaaaaattt aactttgccg
     5521 tcattcccgc gtaggcggga atccatagtg gaatttacag aacccgatat ttgaaaagca
     5581 gttgccgaaa ttcaaaaaat ggattcccgc ctgtgcggga atgacggcaa ggtggcagta
     5641 aacgttttaa acagtattga ttgtcaatga aactcaaaag gccgtctgaa acccattttt
     5701 cagacgatct ccataaaaaa ttatttatta aatacccgta actaggaacg aaccatgtta
     5761 caaatcgaaa tcgacggcaa acaggtatct gtggagcagg gcgcgacggt gattgaggcc
     5821 gcgcacaagc tcggtactta tattccgcat ttctgttacc acaaaaagct ctccatcgct
     5881 gccaactgcc gtatgtgtct ggtggacgtg gaaaaggccc ccaaacctct gcccgcctgt
     5941 gccacgccgg ttacagacgg catgattgtg cgtacgcatt cggcaaaagc ccgagaggcg
     6001 caagaaggcg tgatggagtt cctgctcatc aaccatccgc ttgattgtcc gacctgcgac
     6061 caaggcggcg aatgccagtt gcaggatttg gcgatgggct acggcaaaac caccagccgt
     6121 tataccgaag aaaaacgttc cgtcgtcggc aaggacatgg gtcctttggt ttccgccgag
     6181 gaaatgagcc gttgtatcca ctgtacccgt tgcgttcgtt tcactgaaga aatcgccggc
     6241 gtgcaagaaa tcgctatggc caaccgcggc gaacactctg agatcatgcc ttttatcggc
     6301 aaagcagtgg aaaccgaatt gtcaggcaac gtcatcgatt tgtgtcctgt cggcgcattg
     6361 accagcaaac cgttccgctt caacgcgcgt acttgggaat tgaaccgccg caaatccgtt
     6421 tccgcccatg atgctttggg cagcaacctg attgtgcaga ccaaagacca taccgtccgc
     6481 cgcgtgctgc cgctggaaaa cgaagcaatt aatgaatgct ggttgtccga ccgtgaccgt
     6541 ttctcctacg aaggcctgta tcacgaaagc cgtctgaaaa acccgaaaat caaacagggc
     6601 ggcgagtgga tggacgtgga ttggaaaacc gcgttggaat atgtccgcag cgcgattgaa
     6661 tgtatcgcca aagacggcaa ccaaaaccaa gtcggtgttt gggcgaaccc gatgaatacg
     6721 gttgaagagc tgtatttggc gaagaaactc gccgacggct tgggtgttaa aaactttgcc
     6781 acccgtttgc gccaacaaga caaacgtctt tcagacgacc tcaatggtgc gcaatggttg
     6841 ggacaaagca ttgaatcttt agctgacaac gatgccgtat tggtagtcgg cgcgaactta
     6901 cgcaaagaac agccgctctt gaccgcccgc ctgcgccgcg ccgccaaaga ccgtatggcc
     6961 ttgagcgtat tggccagcag taaagaagaa ttgtttatgc cgcttctgtc tcaagaagcc
     7021 gtacatcccg acgagtgggc aggtcgtctg aaaaacctgt ctgccgatgc ggaacacgcc
     7081 gttaccgcca gcctgaaaaa cgctgaaaaa gcagcggtga ttttgggcgc ggaagtgcaa
     7141 aaccatcctg attacgccgc catttatgcc gccgcgcaag agctggcgga cgcgaccggc
     7201 gcagtgctgg gtattttgcc gcaagccgcc aacagtgttg gtgcggatgt cttgaatgta
     7261 aactccggcg agagcgttgc cgaaatggca aacgcgccga aacaggcagt cttgttgctc
     7321 aacgtcgagc cggaaattga tacggttgac ggtgcaaaag ccgtagccgc gttgaaacag
     7381 gcaaaaagcg tgatggcgtt tacgccgttt gtcagcgaaa cgctgctgga cgtgtgcgac
     7441 gtgttgttgc cgattgcacc gtttaccgaa acctcaggca gcttcatcaa tatggaaggc
     7501 cgtctgcaat ctttccacgg cgtggtacaa ggcttcggcg attcgcgtcc gatgtggaaa
     7561 gtattgcgcg tattgggcaa tctgtttgac ctgaaaggtt ttgaatatca cgataccgct
     7621 gcgattctga aagacgcgct ggatgcagaa agcctgccgt ccaaactgga caaccgtagc
     7681 acatggacag gggagggcgt tcagacggcc tcagaccgcc ttgtccgtgt cggcggcgtc
     7741 ggtatttatc acactgattc tatcgtgcgc cgttccgcac cgttgcaaga aaccagccat
     7801 gccgccgtgc ctgccgcgcg tgtaaatccg aacactttgg cacgcttggg cctgcaagac
     7861 ggacaaattg ctgtcgccaa acaaaacggc gcaagcgtat cggttgccgt caaagccgat
     7921 gccggtttgc ctgaaaacgt ggtgcatctg ccgctgcata ccgaaaatgc cgcgctgggt
     7981 gcgttgatgg acactattga actggcggga gcttgatcat gcaagaatgg ttccaaaacc
     8041 tctttgccgc aacgctcggt ctgggcgatt tgggtattac cgtaggcttg gtggtatccg
     8101 tcatcgtcaa aattgtgatt atcctgattc cgctgattct gaccgttgcc tacctgacgt
     8161 atttcgaacg taaagtcatc ggctttatgc agcttcgtgt cggcccgaac gtaaccggcc
     8221 cgtggggtct gattcagccg tttgccgacg tgttcaaact cttgtttaaa gaagtaaccc
     8281 gtccgaagtt gtcaaacaaa gccctgttct acatcggccc gattatgtcg ctcgccccgt
     8341 cttttgcggc atgggcagtg attccgttca acgaagaatg ggtgctgacc aatatcaata
     8401 tcggcctttt gtacatcctg atgattacct cgctgtcggt ttacggcgtg atcatcgcgg
     8461 gctgggcttc caactccaaa tattcgttcc tgggcgcaat gcgtgcctcc gcgcaaagca
     8521 tttcttacga aatcgccatg agtgccgcgc tggtgtgcgt cgtgatggta tcgggcagta
     8581 tgaacttctc cgacatcgtt gccgcgcaag ccaaaggtat tgccggcggt tcggtattct
     8641 cgtggaactg gctgccgctc ttccccatct tcatcgttta tctgatttcc gccgttgccg
     8701 aaaccaaccg tgcgccgttt gacgtggcag agggtgagtc tgaaatcgtt gccggtcacc
     8761 acgtcgaata ttccggcttc gcgttcgcgc tgttcttcct tgccgaatac attttcatga
     8821 ttctgattgc cgcgctgaca tcgttgatgt tcctcggtgg ctggttgtct ccgttcccgc
     8881 aaagctgggg ctttatcggt acgccttccg cattctggat gttcgtgaaa atggcggcgg
     8941 ttctgtactg gtacctgtgg atccgtgcaa ccttcccgcg ctaccgttac gaccaaatca
     9001 tgcgtttggg ctggaaagtg ctgattccga tcggcttcgc ctacatcgtg gttttgggcg
     9061 tgtggatgat ttcaccgctg aatttgtgga aataagtttc agacggcatc ttgaggccgt
     9121 ctgaacaaag cgattttgaa tacctaacga aatccctgtt ttgagggaac ataatatggc
     9181 taacttagta aaaacctttc tgcttggcga attggtaaaa ggtatgggcg taacgctcaa
     9241 aaactttttc gcccgcaaag acacgattta ttttcccgaa gagaaaacgc cgcaatccgt
     9301 gcgtttccgc ggcctgcacg cgcaacgccg ttatccgaac ggcgaagagc gctgtattgc
     9361 gtgtaaattg tgtgaggcag tttgtccggc aatggcgatt aacatcgaat cggaagaacg
     9421 tgaagacggt acccgccgca ccaagcgtta cgacatcgat ctgaccaagt gcatcttctg
     9481 cggtttctgc gaagaggcct gcccgaccga tgcgattgtg gaaacccata tttttgaata
     9541 ccacggcgag aaaaaaggcg acttgcacat gaccaagccg attcttttgg ccattggcga
     9601 taaatacgaa gctgaaatag ccaaacgcaa agccgctgac gcgccgtatc gttaatgctt
     9661 tggggcttct tggaaggttt taaatatgga aggactgatt aatgcattga aatatttagc
     9721 cgaacatgag ccaatagata attttgaaga aattagaact agaaatagtc cgattgagtt
     9781 gccaagtgga ttaagtaatt ttgaacaaaa tattttttta aaagaaaatt tatccccaaa
     9841 attacaaaat gatgatagct tgaagacgca ttattggatt atccgtgaat ggggtgggat
     9901 taaaagtttt aaacaatctg ctgaaaatag ccagcttatt cgtcaatttt tatcggaact
     9961 taattcggga aaattgagta gtggtttgtt gaaaatttca tcattatcta aattggcttc
    10021 ttttatagat tgtgagcgat tcgccattta tgattcacgc gctatttttt cgttgaattg
    10081 gttgttgttt aaatttacaa atgcagattt gttttttcag ccacaaggta gaaataggga
    10141 actagaaatc cgaaatatga acgtattgtt tcatttttct gatatcaaac cgaattatcg
    10201 gaaaccagac gtttcgtttc atcaatattg tggattgtta caagatttgg cgaaacaagt
    10261 ttatggtaaa caagcaaaac cgtatcacat agaaatgttg ttattcaaaa ttgcgacaac
    10321 gtggatttgt gcggatatgg atcaactgat taagtttgat tgtttgcgta accaggattt
    10381 tcagactgct tgaaaccata tttttgatta ataaagaaag catagactat gactttccaa
    10441 ctgattttat tttatatttt tgcagtgata attctttatg gcgcgatcaa aaccgtcacc
    10501 gctaaaaatc ctgttcacgc cgctttgcat ctggtgttga ccttctgcgt gagcgcgatg
    10561 ctttggatgc tgatgcaggc tgagtttttg ggcgtgacgc tggtggtggt ttacgtcggc
    10621 gccgtgatgg tgttgttcct gttcgtcgtg atgatgttga acatcgacat tgaagaaatg
    10681 cgtgccggtt tctggcggca cgcgcctgtt gccggtgtgg tcggcacatt gttggcagtt
    10741 gccctgattc tgattctggt caatccgaaa accgaccttg ccgcatttgg gctgatgaaa
    10801 gacattcccg ccgattacaa caacatccgc gatttgggca gccgtattta taccgactat
    10861 ctgctgccgt ttgaattggc ggcggtattg ctgctgttgg gcatggtagc cgcgattgcg
    10921 ctggttcacc gtaaaaccac caatccgaaa cgcatggatc ctgccgacca agttaaagta
    10981 cgtgccgacc aaggccgtat gcgtctggtg aaaatggaag cggtcaaacc gcaagtcgaa
    11041 tctgccgaag aaagcgaagt ttcagacggt ctcaagccgg aaggggaggg caaagcatga
    11101 ttaccttgac gcattatctg gtattgggcg cgctcctgtt cggtatcagc gcgatgggca
    11161 tctttatgaa ccgcaaaaac gtgctggtct tgctgatgtc catcgagctg atgcttttgg
    11221 cggtgaactt caactttatc gccttctcgc aacatttggg cgataccgcc ggacagattt
    11281 tcgtattctt cgtactgacc gttgccgctg ccgaatctgc catcggtttg gcgattatgg
    11341 tattggtgta ccgcaaccga caaacaatca acgttgccga tttggatgag ttgaaagggt
    11401 aaaggtaggt tgggtcgaaa cctgacaaga caccgatgcc gtctgaaaac ccgataggaa
    11461 aaacgatgaa atccatagac gaacaaagcc tgcataatgc ccgccgcctg tttgaaagcg
    11521 gcgacatcga ccgtatcgaa gtcggtacca ccgcgggcct gcaacagatt caccgttacc
    11581 tgttcggcgg cttatatgat tttgcgggtc aaatcaggga agacaacatt tccaaaggcg
    11641 gttttcgttt tgccaacgcc atgtatttaa aagaggcttt ggttaaaatc gagcagatgc
    11701 ccgagcggac ttttgaagaa atcatcgcca aatatgttga aatgaacatt gcccatccgt
    11761 ttttggaggg taatggcaga agtacccgca tctggctgga tttggtgctg aaaaaaaacc
    11821 tgaaaaaagt cgtgaactgg caaaatgtaa gtaaaaccct gtatttgcag gcgatggaac
    11881 gcagccccgt caacgattta gaactgcgct ttctgttaaa ggacaacctg actgacgatg
    11941 tggacaaccg tgaaatcatc tttaaaggta tcgagcagtc gtattattac gaagggtatg
    12001 aaaaaggctg agggtcgtct gaaaagcgat ttcagactgt ttcagacgac ctgattcggt
    12061 aggtgatcag acgggagcgg atgagaaaag aaattctggg taagaataat ccggtctgaa
    12121 atattggaag aagaatgatg gataaaaatc agttagaaca agaatttcat aaagccatgt
    12181 taaatattta tcaggaggct ttgaatttgc cgcaacctta caaggcgaca cgatttttac
    12241 aaattgtaaa tgaatttggt ggtaaagagg cggcggataa attattgagt acgggggaaa
    12301 agaagactca gaccggtttt acagagctga ttttgagtgg tggcggagtc cacgccttga
    12361 aatacagtat ggaatatctg gtgttacaaa agccgtggtg tgatttattt actgaagagc
    12421 aattagctgt ggcacgcaaa cgattggagc gtgttggatt tgtttttccg aagtaatttt
    12481 gtacgaaaca aacatagatt tttaaatcaa tcggattcaa tcaaatgaac gacatgactt
    12541 tatatctcat catcgccctc gtgcctttgg caggctcgct gattgcgggt ttgttcggca
    12601 acaaaatcgg acgtgccggc gcgcatacgg ttacgatact cggtgtggcg gtgtctgccg
    12661 tgctgtcggc ttatgtgctg tggggattcc tcaatggcag ccgtgccaag tttgacgaaa
    12721 acgtctatac ctggctgacg atgggcggtt tggatttctc cgtcggcttc ttggttgata
    12781 cgatgacggc gatgatgatg gtcgtggtaa cgggcgtgtc gttgatggtg catatctaca
    12841 ccatcggcta tatgcacgac gaaaaagtcg gctaccaacg cttcttcagc tacatttctt
    12901 tgtttacatt cagcatgttg atgctgatta tgagcaacaa cttcatccag ctcttcttcg
    12961 gttgggaagc ggtgggtttg gtgtcgtatc tcttgatcgg tttctatttc aaacgcccga
    13021 gcgcgacatt tgccaacctg aaagcctttt tgatcaaccg tgtcggcgac ttcggctttt
    13081 tgctcggtat cggcttggtg cttgcctatt tcggcggcag cctgcgctat caggacgtat
    13141 ttgcctatct gcccaacgtc caaaatgcca ctatccagct tttccccggt gtggaatggt
    13201 ctttgattac cgtaacctgc ctgatcctgt ttgtgggcgc gatgggtaaa tcggcacaat
    13261 tcccactgca cgtttggctg cctgattcga tggaaggccc gaccccgatt tctgcattga
    13321 ttcacgccgc aaccatggtt accgccggtt tgttcatggt atcgcgtatg tcgccgattt
    13381 atgagatgag cagcactgcg ctgtctgtca tcatggtaat cggtgcgatt actgccctgt
    13441 ttatgggctt cttgggcgtg attcaaaacg acatcaaacg tgtggttgcg tattccaccc
    13501 tgtcgcaatt gggctatatg accgtggctt tgggcgcgtc cgcctattcc gtggcgatgt
    13561 tccatgtgat gacccacgct ttcttcaaag ccttgttgtt cttggcggca ggcagcgcga
    13621 ttatcggtat gcaccatgac caagacatgc gccatatggg caacctgaaa aaatatatgc
    13681 cgattacttg gctgaccatg ctgatcggta acttgtcgct gattggtacg ccgttcttct
    13741 ccggcttcta ttccaaagat tcaattatcg aagcggcgaa atacagcacc cttcccggca
    13801 gcggctttgc ttattttgcc gtcctcgcca gcgtgttcgt taccgcgttt tacgcattcc
    13861 gccaatactt tatggtgttc cacggcgaag aaaaatggcg cagcctgcct gaacatcatg
    13921 acgatcatca tggcgaagag catcacggct tgggtaaaaa cgacaatccg cacgaaagcc
    13981 cgttggttgt taccctgcct ttgattttgc ttgccattcc gtccgtcatc atcggctacg
    14041 ttgttatcga gcctatgctc tacggcgatt ttttcaagga tgtgattttc gtcaacgccg
    14101 acgcgcatcc gaccatgcac atcatgaagg aagagttcca cggcgcattg gcaatggtat
    14161 cgcacagcct gcattcgcct gtactctacc tcgctatcgc aggtgtattg agcgcatggc
    14221 tcctgtacgt caaactgccg cacctgcctg cgaaaattgc acagatattc cgtccgattt
    14281 atgttttgtt tgaaaacaaa tactacctcg acgtcctgta tttcaacgtt tttgccaaag
    14341 gcacgcgcgc attgggtacc ttcttctgga aagtcggcga taccgccatt atcgacaacg
    14401 gtattgtcaa cggctctgcc agactggtcg gcgcgattgc cgcgcaagtg cgtaaagccc
    14461 aaaccggctt tatctacacc tacgccgccg ctatggtatt cggcgtattg gtcttgctcg
    14521 gcatgacctt ctggggcttg ttcagataaa ggcgggtttc agacgacctg ttgatagttt
    14581 tgtagaggtc gtctgaaaag aaccattcaa tttgtaggtc ggatacttgt atccgacatg
    14641 aacaagaaaa cagtacagcg tgtcggattc gagaatccga ctaaggcata tcgggattgt
    14701 tcagataaaa atgagatttt cagacgacgt ttaggtcgtc tgaaaaaaga aacttgagaa
    14761 acaatgtcaa acacacaaac catctgctct gccgacttca ccgcttcccg cgcatggggc
    14821 gcactcgaca tcgccaatat gaacggcacc actgtgcgcc tgcactggac ggaccagccc
    14881 tacaaatggc acgtcaacga cggcgaggaa gtgtttgccg tgatggacgg cgaagtggac
    14941 atgcactacc gtgaaaacgg cgaagagcac atagcacggc tgcgaagcgg cgacatcttt
    15001 tatgccggca tcggcgcgga acacgtcgcc cacccgcgcg gcgaaacgcg gattttagtg
    15061 attgagaaag aaggcagtgt ttagggcgga tacgcataag tattatgtgc tttttcaggt
    15121 atcctgaaaa tcataaatct atcaacgaga ctttaatcat ggcaaatcta aatgtgagta
    15181 gtaaaaaaat tattaatctg ctaggtaatc aagatatgca ggaaaaatat tttatcattc
    15241 ctgaatatca acgcccctat cgctgggata ccgaaaaatg cgccgtatta tggtctgata
    15301 ttgtggattt tcgccagtcg tccacaggaa aaaatgaaga atattttctt ggtacaatcg
    15361 ttgtttgccc caatgaaaaa ggtaatttgg aagtaattga tgggcaacag cgtttaacat
    15421 cattactgct gttattgcgt gcgttttatc gagttttaga gcaaacggaa agtacccccg
    15481 ataccgcagc caaaattacc acacttaaaa gcaaaattgc cccctgtatt tgggatgttg
    15541 atgttctaac ggctgaaatt accgatagaa ccgcaatccg gctgcatacg caagttgcca
    15601 cagaaacaga taacgaaatt ttgcacgaga ttttggcaaa cggtgaaatc tcagaagagt
    15661 gtcgttctaa ttacgccgtt aattatttgt atttcctgaa acagtgccaa gaatacgcca
    15721 gaaccaaccc aatggattgg tatcatcttt gtttaactat tttgaatgac tgtattttac
    15781 ttccgattga aagtgacagt ttaaatagtg cattaaccat attttccaca ttaaacgata
    15841 ggggcttgcc tttgtcggat gcagatattt ttaaagccag gctttataag atggcgcagc
    15901 agaaagataa atttgttgaa caatggaagg aacttgttgc gttggcagag ggtgcatcta
    15961 tttccgtaga tgatttgttc cgctattaca cccatgtatt aagggcgaaa gaaaagatta
    16021 cggataaaga aattgggctt cgccgttttt atactgacaa ccgaaacaaa cagttggaaa
    16081 acgaaaattt gttcaatcac ttaattgagc tggctggatt ttggcaggat attaacaaca
    16141 gcaaaactaa ccaagacgtg gaaacttcga actttgtaaa tgacgaggcg gccaagtggc
    16201 tgcaatgtct gaatgtctat cctaatgagt tttggaaata cgccgcgagt gtgttcttca
    16261 ttgcaaacaa gggtgcgcaa tcctttaaag atgattttgc agcattatta aaacagctta
    16321 ctgcattttt gtatgctaaa tttttagttg cgccaaccgt aaccgcaatt aaagatgata
    16381 tttataaatt atgtgttgcg atttatcacg gtgaaaaaaa cgctttatca tatgttatgc
    16441 ctgcacccat acactatgaa caaaatacag gacgtataac taaagggttg ttaatgatta
    16501 atgcttatct atttgatgaa aagcagaaat tattgccaac taaaactgaa atcgaacata
    16561 tctttccgaa aaaatggcag gaaactaact ataatggttg gtcaatcata gatgcggaac
    16621 aatatttaga acaactaggt aataaaattg tttttgaaaa acggttaaat attcaggcag
    16681 gtaacggcta ttttggtaag aaaaaggagc aatatcaaaa atccgatatt gttgaagtgc
    16741 gtgaattagc aggtgaaaat gccaatgatt ggttaccgag tgatattcag aaacgccagc
    16801 agcagattgt ggatagattg aaacagtttt tcgataattg ttttgaagca gccagcatcc
    16861 ccaaaaaaaa ttaacttttc caataacctc caaaccaaac aggtaacgca atgttttcta
    16921 accatcttct cagcttggca atatggatac ccatcgccgc aggtgtgctg gttttggcaa
    16981 cggggtcgga cagccgtgcg ctgcttgccc gcgtgctcgc cttcatgggt gcgcttgccg
    17041 gtttcttggt aacgctgccc ctgtttaccg gtttcgaccg tttgagcggc ggctatcaat
    17101 ttaccgagtt ccacgagtgg attccgctgc tgaaaatcaa ctatgcattg ggcgtggacg
    17161 gtatttcagt gctctttatc atcttgaatg cgtttattac gctgttggtg gtattggccg
    17221 gttgggaagt tattcagaaa cgtccggcgc agtatatggc ggcattcctg atgatgtcgg
    17281 gtttgattaa cggcgcgttt gccgcacagg atgcgattct gttttatgtg ttcttcgagg
    17341 gtatgctgat tccgctgtac ctgattatcg gtgtatgggg tggcccgcgc cgcgtttatg
    17401 cgtcggtcaa gctgttcctc tatacgctga tgggttcgct tttgatgctg gttgccatgg
    17461 tttacctgta ctatcagaca ggcagcttct ctattgtcga tttccaaaac atcaagcaga
    17521 ttccattggg cgtacaacag cttttgtttg tggcattctt cctgtcattt gccgtaaaag
    17581 tgccgatgtt ccccgtacac acttggctgc cggatgccca cgttgaagca ccgaccggcg
    17641 gttcgatggt gttggctgcg attacgctga aactgggtgc gtatggtttc ttgcgcttta
    17701 tcctgccgat tatgccggat gcggcacgct attttgcccc cgtgatcatc gtattgagtc
    17761 tgattgccgt gatttatatc ggtatggtgg ctttggtgca aaccgatatg aagaaactgg
    17821 tggcgtattc gtccatcagc catatgggtt ttgtaacgct tgggatgttt ttgtttgttg
    17881 acgggcagtt ggacgactgg gcgttgaaag gcgcaatcat tcaaatgatt tcccacggtt
    17941 ttgtgtctgc cgcgatgttt atgtgcatcg gtgtgatgta cgaccgcctg cacacgcgca
    18001 atatcgccga ttacggcggc gtggtcaacg tgatgcccaa gtttgcggcg tttatgatgt
    18061 tgttcggtat ggcgaacgcc ggtttgccgg cgacttccgg cttcgtgggc gagtttatgg
    18121 tgattatggg cgcggttaaa gtgaatttct gggtgggcgc gttggcggct atgacgctga
    18181 tttacggcgc gtcttatacc ctgtggatgt acaagcgcgt gatttacggc gcgatccaca
    18241 atccgcacgt tgccgaaatg aaagacatca actgccgcga atttgcgatt ctggcgattt
    18301 tggcggttgt ggtattgggt atgggtctgt atccgcaagc gtttatcgaa gtggtgcatc
    18361 aggcggcaaa cgatttgatt gcccatgtgg cacaaagcaa gatttgaggt gtgtaaatga
    18421 actggtctga tttgaattta atgcccgcca tgcccgaagt cgcgctgctg tcgctgctgg
    18481 tgttattgtt gctggcagac ttgtgggtca gtgatgacaa acgccgttgg acgcattacg
    18541 gcgcgttggc aacggtggcg gttacggctg tggtgcagct tgccgtttgg gaacagggca
    18601 gcacgtcttc gttcaacggc atgtatattg cagacggtat gtcgcgtttg gcaaaaatgg
    18661 ttttatatgc cttgacgttt gccctgtttg tttatgccaa gccctacaac caagtgcgcg
    18721 gtattttcaa aggcgagttt tacaccctgt cgctgtttgc cctcttgggc atgagcgtga
    18781 tggtgagcgc ggggcatttt ttaactgcct atatcggttt ggaactcttg tcgcttgccc
    18841 tttacgccct gattgccctg cgccgcgatt ccggctttgc cgccgaagcc gccttgaaat
    18901 attttgtttt gggcgcgctg gcatccggcc tgctgctcta cggtatttct atggtttacg
    18961 gcgcaaccgg ttcgctggaa tttgccggcg tgctcgcctc ttccttcaat gaagaagcca
    19021 atgaatggct gttgaaactg ggtctggtgt ttatcgtcgt cgccgttgcg ttcaaactcg
    19081 gcgcggtgcc gttccatatg tgggtgcccg acgtgtatca cggcgcgccc acttctgtta
    19141 ccgccttggt cggcactgcc ccgaaagtcg ccgccgtcgt tttcgctttc cgcatcctcg
    19201 ttaccgggct gggaaccgtg catcatgact ggtctctgat gtttgccctg cttgccgccg
    19261 cctcgctgct ggtcggcaac cttgccgcca tcatgcagac caatatcaaa cgtatgctcg
    19321 cctattccac cgtatcgcat atgggcttta tcttgttggc gtttatggca ggcgcggtcg
    19381 gctttgcggc gggtctctat tacgccatta cctacgcgct gatggcggcg gcagggttcg
    19441 gcgtgttgat ggtgttgtcg gatggggaca acgagtgcga aaacatcagc gatttggcag
    19501 ggttgaacca acaccgcgta tggcttgcct ttttgatgct gctggttatg ttctctatgg
    19561 cgggcattcc gccgctgatg ggcttttacg ccaaattcgg cgtgattatg gcactcttaa
    19621 aacaaggcta tgtttggttg tccgtatttg ccgtcgtgat gtcgctgatt ggcgcgttct
    19681 actacctgcg cgtggtcaaa gtcatgtatt ttgacgaatc cggccgcgcc cgtcccaccg
    19741 tcggcggcaa caatgccgca aaattccttt tgagcgtcaa cgcgctgctg ttggtgctgt
    19801 ggggcattat gccgcaaacc gttatcgact ggtgcgccaa ggcgttggaa aacacgctgt
    19861 aagccgccgc aacggcagcc gtgtcagagg ctgccgtttt tgttaagata tgccgttccg
    19921 caacgcagtt cagacggcat cgccgccgac aatgcccaaa cagaaagccc gccatgaccg
    19981 catccatgta catccttttg ctgcttgcct tgatttttgc caacgccccc ttcctcacga
    20041 ccaagctgtt cggcatcgta ccgctcaagc gcaaacattt cggacaccac ctgatcgagc
    20101 tggcggcagg tttcgcgctg accgccgttc ttgcctacat cctcgaatcc cgtgcgggag
    20161 cggtacacga tcagggttgg gagttttacg ccaccgtcgt ctgcctgtac ctgatttttg
    20221 cgtttccctg tttcgtgtgg cggtattttt ggcacacgcg caacagggaa taggcaggca
    20281 taggaatgcc gtctgaaacc ctttcagacg gcatttgttt cattcaagtg tcggcacgtt
    20341 tcaatcggcg atatacgccg gtttcaatat ttgcgggcga ctgcaaattc tgccaactgc
    20401 cgcaggcgca gggctttgcc gccgaagggt tcgagcagcg cgaccgcttc ggcaaccagt
    20461 ttgtgtgcgt atgagcgcgc cgcttccaag cccatcagtt tcacataagt cggcttgtcg
    20521 ttgtctgcgt ctttgcccgc cgttttgccc aaagtcgccg tgtccgcttc acaatccaac
    20581 acatcgtcaa tgacttggaa cgccagcccc agttttgccg cataatcgtc caataccgcc
    20641 agactgtctt cagacagatt cgggcaggac atcgccccca ataaaaccgc cgcacggatt
    20701 agcgcacccg ttttcaggct gtgcatctgt tccaaatcgg cttgaaccat ttgtttgccg
    20761 acattcgcca aatcgattgc ctgaccgccc gccatgcccg cgctgccgcc cgctttcgcc
    20821 aacaccgaca acattgccaa ctggcgtgct gcgggcagtt ctgtcggacg gcttaacacg
    20881 tcgaaggctt gggtttgcaa agcgtcgccg accagtagcg cggtggcttc gccatatttg
    20941 atgtggcagg tcggtttgcc ccgacgcagg ctgtcgttgt ccattgccgg catatcgtcg
    21001 tgaaccaacg aataggcatg gatcatttcg attgccgcca ttgcctgttc tactgcttca
    21061 tgcacggctt cgcctaattc cgaagctgcc agaaccagca tcggccgcag acgtttgccc
    21121 ccatccaaaa ccgcataacg catggcttcg tgcagtgtgt gcggtatttc gttttcagac
    21181 ggcaaaaagc gttccagcag cagctctgtt tgcgcctgcg ccctctgttg ccacgctttc
    21241 aaatcattcg tcggattcaa ggttcaactc cttcagcccg tccgcatcca aaacctgtaa
    21301 tttctgttcg acttgtgcca gcttggtttg gcagtacctg accagctcgt tgccttcctg
    21361 ataggcggca agcgcgtctt ccaagggcat ttcaccctgc atagactgcg tcagcgattc
    21421 aaggcgcgac agtgcctctt caaacgattt cggggcgttt ttcttcatag tttcgggagt
    21481 ttctgtaaaa acggaattgt agcatttctg aaaaccggat gccgtctgaa acagcaggat
    21541 ttcagatggc atggtttttg ccctgcaaac ggcaagaggt tatttgagca gatcgtcggt
    21601 aatgcgttgc aggaaggtca gccgttcggt gcggatttta ccggtttgcg cggcggcttt
    21661 gaaggcgcag ccgggttcgg cgcggtgggt gcagttgtgg aagcggcatt gcccgacaag
    21721 gtggcggaaa tcggggaaat agcgcggcaa atcggcggct tggaggtggt gtaaaccaaa
    21781 ttcttgcaaa cccggggagt cgatgagttg ggtttcgccg ttcaaatcat aaagccgggc
    21841 gtgggtggtg gtgtgttttc ccgagtcgag tgcggcggaa atgtcgccgg tgcgggcggt
    21901 ttggctgcct aaaagggcgt tggtcagggt ggatttgccc ataccgctct gcccgagcag
    21961 gatgttgctg tgcccttgca ggacggggcg caggaggtcg gcgttttcca gcgcacgggt
    22021 ttcgatgacg ggataaccca gcgtttcgta gaatttgagt ttttcgcgcc aaagggcggt
    22081 ttcgggcagg tcggctttgt tcaggacgat gacggcttca ataccggcgg cttcggcggc
    22141 aagcagggcg cgttgcagca gccgcacgct cggactcggg acggcggcgg ttacgatgag
    22201 gagttgggta acgttggcgg cgatgagttt ggttttccac gcgtcttggc ggtagagcag
    22261 gctttggcgc ggtaaaaaat cttcaatcac aacttgttcg gcgttgacgg ggctgatgcg
    22321 gacgcggtcg ccgcaggcga aatcgacgcg ttttttgcgg gtgctggctt cgtaggttgt
    22381 gccgtcgggc gtgcggacaa tgtagcggcg gccgtagctg gcggtaattt gggcggtgtc
    22441 gttcatggtt tctttggggt tgggtgtgga aatgccgtct gaaaacgggt gttcggacgg
    22501 catcggttca gtcgtgctgc cactcgacgt gttcgttgag gaagccgccg ctctggtgcg
    22561 cccagagttt ggcgtaaagc ccgcgttttt cgaggagttc ggcgtgtgtg ccttcttcga
    22621 tgatgcggcc tttgtcgagg acgacgagcc tgtccattgc ggcgatggtg gagaggcggt
    22681 gggcgatggc gatgacggtt ttgccgtcca tcattttgtc gaggctttct tggatggcgg
    22741 cttcgacttc ggaatcgagc gcgctggtgg cttcgtccaa aagaagaatc ggtgcgtctt
    22801 tgagcatcac gcgggcgatg gcgatgcgct ggcgttgccc gccggagagt ttcacgccgc
    22861 gttcgccgac gtgtgcgtcg tagccgcgcc gccctttggc atcggaaagg tcggggatga
    22921 agccgacagc ttcggcgcgt tcggcggcag aaaccatttc ggcatcggtc gcgtcggggc
    22981 ggccgtaaat aatgttgtcg cgcacggaac ggtgcagcag cgaggtatct tgcgtgacca
    23041 aaccgatttg ggcgcgtaaa gattcttggg taacgccgct tatgtcctgc ccgtcgatcg
    23101 aaaccgtgcc gctttgcggt tcgtagaagc gcaaaagcag gttgacgatg gtggatttgc
    23161 ccgcgccgct gcgtccgatc aagccgactt tttcgcccgg gcggatggtg aggttgaagc
    23221 cgttgagcag cggtttgccc gcttcgtagc agaaatcgat gtgttcaaat ttgattgcgc
    23281 cttgcggcac gttcagcggc agggcgttcg gcttgtcgag gatggtgtgc ggtttggaca
    23341 gggttgccat gccgtcgccg acggtgccga tgttttcaaa cagccgcgcg gattcccaca
    23401 taatgtattg cgacaaaccg ttgacgcgca acgccatggc ggtggctgta gcaaccgcgc
    23461 ccacgccgac ctgcccgttg tgccagagcc agatgcccag tgcggcggtg gagagggtca
    23521 gggaggtgtt gacgatgaag ctgcacgaat gcagcagcgt cgccagccgc atttgggcgc
    23581 gcaccgtaac cataaattct tccatcgact gcttggcata ggcggcttca cgcgcgccgt
    23641 gggagaagag tttgacggtg gcgatattgg aataggcatc ggtaatgcgg ccggtcatca
    23701 gcgatcgggc atccgcctgc catgcggcgg tttgccccaa tttgggaatc agcaggcgca
    23761 tcaccgaagc gaaaccgaca atccagccga taaagggcag cagcagccat gagtcgagcg
    23821 aggcgagaat cacgccggag gtaatgaaat acaccgacac ataaacgacc atatcggcaa
    23881 ccgtcatcac cgcgtcgcgc aacgccagcg cggtctgcat gactttggcg gacacgcgtc
    23941 cggcaaattc gtcctgataa aaaccgaggc tttggttcag catcaggcgg tggaagttcc
    24001 agcgcaggcg catagggaac acgccctgaa gggtttgcag gcgcacgttg gacgcggcat
    24061 acgcccacac gaccgaaaac accatcatcg ccgccattgc cgccagttcc caaccttttt
    24121 cggcaaacag ttcggcgggc gcgtatttgc cgagccactc cacgattttg cccataaatt
    24181 gaaaaaccag ggcttccata atgccgatgc cggcggtcag cgcagccagg gcggctatcc
    24241 atttccgcac gccggccatg ctgctccaga caaaccgcca caagcctttt tctggcgttt
    24301 tcggggcggc ttcgggataa gggtcgattc gggactcgaa ccaggaaaat attttgttca
    24361 acattgtttt cgatttcggt aaaacagttt cagacggcat caaacacaat gccgtctgaa
    24421 aggaaggaca ataacgccat tttacgggaa aagccgtcgg gaagacagcg cgaggcggaa
    24481 acgcagggtt tcgtcagggc aaacgccgcg ccgccttcag gcggcattat ttcagcaggt
    24541 ttttcaaagc aaggcgcacg ccttcgccca cgtccgtccc ctccggaacg cctttgaccg
    24601 ccgcttttgc ttcgcgttcg ctgtaaccca gcgcaagcag cgtgctgacg atgtcttccg
    24661 tttcgtcggc ggcgggtgcg gcggcaaaca gcccgtccgt taccgtatgc gcgaccagct
    24721 tgccgcgcag ttccaagacc atacgttcgg cggttttttt gccgattccc ggcgcggaag
    24781 acaggcgttt gacatcttct tcggcaaccg cccgcgccag ctcgtctgcc gtcatcgctg
    24841 acaaaatgcc caaagccgtt ttcgcgccga tgccgccgac cttaatcagt tggcggaagg
    24901 tcttgcgttc ttccgcagtg gcaaaaccaa ataaaagatg tgcgtcttcc cgaatgataa
    24961 gctgggtaaa cagttgtacg ctttcaccca cgggcggcag gttgtagaag gtctgcatcg
    25021 atacgtcggc ctcatagccg acaccgttga catcgatgac gatttgcgga gggttttttt
    25081 caaccagttt gccggtcagt ctgctgatca tgtatgaagg atcctgaagt gtcgggtgca
    25141 aaatgccgtc tgaaaccggt tcgggcttca gacggcacgg attgtatcaa attcagtcgt
    25201 cgcggcggga ggaaatcacg cggccggtac gggcatcgac aacgactttg tattcctgtc
    25261 cgtttttgac gatttcgaca tcatagtgcg gacggccgtt gtcgtgttcg agatcgatgt
    25321 cggtgatttt gccgccgaca cgcgccaacg ctgctttttc ggcttgggcg cggctgatga
    25381 ttttgtcttg tttgctgtgt tggtgtgcgg cgtgtccgtg gtcgtcatcg ccgtgtccgt
    25441 cgtggtgggc gagtgcgggg gcggaaatgc ccatcagtgc ggttgcggcg gcggtcaaga
    25501 gaaggtgttt gatgttcata ttttgccttt gtaaatcgtg ggttggaaaa tgtggatatt
    25561 aataaggtat caaataaccg tcagccggca gtcaataccg cccgaaccat accgcgcgcc
    25621 tgagcttcgg cttcggcggc gcgttcctgc gaggaaaacg gccccatttt gacgacatat
    25681 tcgtaatggc gtttttcaac cgataggttc gggtttgatg ccgatgaagc caggttttgg
    25741 gcggcttggt tcagataggc ttgtgcttcg tgttccgtac cgaaagattt caagtcgatg
    25801 aagatgtctt tgttttcggc aaccagtgcg gattggcccg ggacgatttg ttcgattttg
    25861 acgtgcgccg tcccttggct gacaaagccc aatttttgcg cggcggcttt ggatacgtcg
    25921 atgatgcggt tgccgtggaa gggaccgcgg tcgttgacgc ggacgatgac gcttttgccg
    25981 tttttggtat tggttacgcg cacatagctg gggatgggca gggttttgtg ggcggcggta
    26041 aaggcgttca tatcgtatcg ttctccgccg gaagttttgc gcccgtgaaa cctgccgccg
    26101 taccacgagg cgttgccggt ttgcgtgaat tcggcgactt ggtttttcgg cgtgtagcgt
    26161 tttccggcga ctttgtagct gcggttggcg gaggcgtgca gtttttctgc cttgaccact
    26221 gcgtcggcgg atgccgtctg aagggagtgt gtgccgaatg cggcggtgag aaggaaaagg
    26281 gtttttcggg ttaaagtcaa aacgtgttcc gttcttgagt tgaagacgaa tgggcatcat
    26341 gcccgccgga tacgttccga accgccgtac agtgcggacg gcggttcgga atgtgtccgg
    26401 ataggttttc agacggcatg aacttgcgtt caaacgccgc ctgcgtaacc gtgttgccgc
    26461 cacgcttcaa agagaatcac ggcaacggta ttggaaaggt tcatactccg gctgccgggc
    26521 tgcatcggca ggcggatttt ttgcgcggcg ggcaggctgt cgaggatgtc ggcaggcagt
    26581 ccgcgcgttt ccggcccgaa cagtaaaaca tcgcctttct gaaacgcggt ttcatcgggg
    26641 cgcgccgtgc ctttggtggt cagggcgaaa atgcgcctgc ctgcgagtgc cttgaggcag
    26701 tcgtcgaagt tttcgtgcac cgtcaggctg gcgaattcgt ggtagtcgag cccggcgcgt
    26761 ttcattttgg cggaatccaa tgggaagccg agcggtttga caaggtgcaa atccgcgccg
    26821 gtattggcgc acaggcggat gatattgccc gtgttcggcg ggatttccgg ttggtataaa
    26881 acgatggtaa acataaatat caatcactta taggcgcgta accttgccac aaggcggatg
    26941 gggtgtcaaa aaatttagtt attttttcat tggcgtgcgt gccagcgtcc agcagcagat
    27001 tcggtttgcg cccgattttt tcagcgtctt tgccagttcg tccagcgtcg cgccggtggt
    27061 aaagacatcg tcgattaaca aaatattaca gttttccggt atcggtgtgc ggatttcaaa
    27121 ggcgtttttg atgtttcgcc gccgttcgcc gcctttgagc gtgctttgcg gcgggcggtg
    27181 gtgtcggaaa acggtgtgtc ggggcagtat ctgccagccg tagcgttgtg ccagcagccc
    27241 gacgatgctt tcactttggt tgaacccgcg ttgcagcagc cgctccctgc ttagcggtac
    27301 gggcaggacg aaatcgaaac attcgtctgc aagccggtcg ggcggattct gcatcatcag
    27361 gtctgccagc ggctgcacca tgctcaaatc agccaagtgc ttcagcgcgt gtatcatatt
    27421 gctgacgggc ggttcgtaat gcagcgaagc ccacatccgg tcgaatgcgg gcggtttttt
    27481 ctgacagccg ccgcacaccg cgccgccttg aacgtgcatg aaacacaggg ggcagctgtt
    27541 tgccgcgtcg gtgcggtatg ccgccaaatc gtcgcggcag ccggcgcaga tgccgtctga
    27601 aacgccggac gaaccgtggc ataatacgca acgcctgata gtgggcgcgt ctgcgatgcg
    27661 ccgccaacaa gagagaaaat ccatgcctga tgccgtcaaa aaagtttacc tgatacacgg
    27721 ttggggggcg aaccgccacg tgttcgacga tttgatgccg cgcctgcctg caacgtggcc
    27781 ggtgtccgcc gtcgatttgc ccggacacgg cgacgcgccc ttcgcgcaac ccttcgatat
    27841 tgaggcagcc gccgacgctg ttgccgcaca aatcgatacg cccgccgaca ttctcggctg
    27901 gtcgctcggc ggattggtcg cgctgtatct ggcggcgcgc catcccgaca aagtccgttc
    27961 gctctgcctg acggcgagtt tcgcacggct gacggctgcc gaagattatc ccgaagggct
    28021 tgccgcgcct gcactgggca aaatggtcgg tgcgttccgt tcggattatg ccaaacatat
    28081 caaacagttt ctacaattac agcttctgca cacgcctgat gcggacggaa tcataggcag
    28141 aatcctgccc gatttggcgc gctgcggcac gcctcaagcc ttgcaggagg cgttggacgc
    28201 ggcggaaagg gcggatgcgc ggcatttgtt ggacaagata gatgttccgg tactgctggt
    28261 gttcggcggc aaagacgcga ttacgccgcc gcgtatgggt gaatatctgc accgccgttt
    28321 gaagggcagc aggttggttg tgatggaaaa ggcggcgcat gcgccgtttt tgagccatgc
    28381 ggaagcgttt gccgcgctgt accgcgactt tgtcgaaggg gtttgagatg aaccatcagg
    28441 acgcacgctg gcaggttcac cgccatcttg ccgaacatac cgaccaacgc ctgacactcg
    28501 tccgcaacgc gcccaagtat atcctgcttg caggtgcgga tgcggacatc agccgcagcc
    28561 tgctggcgaa acgctatccg caggcggtat ttgaagaata cgattcccgt gcggattttt
    28621 tggcggcagc cgccgcccgc aaaggcggtt tttggcaaag gtttgcgggt aagggcgtgg
    28681 tgcagcactg ccaatccccg accgcgccgc tgcccgaagc gtgtgccgat atgttgtggt
    28741 cgaatctcgg actgttggcg gcggaacaaa tccttcctgt gctgcacaac tgggcgcgcg
    28801 ccttgaagac ggacgggctg ctgtttttta cctgcttcgg gcgcgacact tttaccgaac
    28861 tgaaatgccg tctgaaagaa aacggcattg aaagccgcag cgtgatgttt cccgatatgc
    28921 acgacttggg cgatatgctt gctgaaaacg gcttttacga ccccgttacc gatacggcga
    28981 agctggtgtt ggattacaaa aaggcggaaa cgttttgggc ggatatggac acgctgggcg
    29041 tttggcgggc gatggcgtgg aacgatgaaa acgccgcgcg ttcgtgtgtc gggacaatat
    29101 ttgaacggga aggcggtttg agtattacgc tggaaacagt gtacggacac gccgttaaaa
    29161 aactgatgct gccgcaaggg gagaacgtgg tgcagttttt tccgaagaga tgatgtgcag
    29221 atgccgtctg aagccgtttc caagtttcag acggcatttg tttgtgaaaa ccgacagaac
    29281 taaaggaaat gccga
//
LOCUS       DAWKJW010000008        27557 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.008, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000008 DAWKJW010000000
VERSION     DAWKJW010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27557
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.008"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(20..682)
                     /locus_tag="WJJ54_000285"
     CDS             complement(20..682)
                     /locus_tag="WJJ54_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ7341201.1"
                     /translation="MIHAVLFDLDGTLADTALDLGGALNTLLARHGLPPKSMDEIRNQ
                     ASHGAAGLLKLGAGITPDHPDYARWRTEYLDEYDSRYAQDTELFDGVNELIAELDRRG
                     IKWGIITNKPMRFTDKLAPKLGFIIPPAVVVSGDTCGEPKPSVKPMLYACGQIHADPQ
                     HTLYVGDAERDIQAGRNAGMKTVLAEWGYIAPEDDTGSWQADFHIRTPLDLLECLDKI
                     QS"
     gene            complement(695..1522)
                     /locus_tag="WJJ54_000286"
     CDS             complement(695..1522)
                     /locus_tag="WJJ54_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEZ7341202.1"
                     /translation="MKPDIYALLERALLSGDPDEKGRLTDEAFAAVQNADGAETNAPP
                     ADFPRAGRPDKPVLVAPSQLTPRKMNTAEGYAAMLHAIAHIEFNAVNLALDAAYRFRT
                     LPFQFVRDWVKVAKEEVYHFRLMRDRLRAFGFDYGSFEAHNHLWDMAYKTAYDPLLRM
                     ALVPRVLEARGLDVTPGIRAKVAQRGDSETCGVLDIIYRDEVGHVAIGNHWYQHLCRE
                     RGLEPVALFRSLITRYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQGLKQNKNTV"
     gene            1800..2423
                     /gene="lolA"
                     /locus_tag="WJJ54_000287"
     CDS             1800..2423
                     /gene="lolA"
                     /locus_tag="WJJ54_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HEZ7341203.1"
                     /translation="MMKPHNLFQFLAVCSLIVAVASAQAGAVDALKQFNNDADGISGS
                     FTQTVQSKKKTQTAHGTFKILRPGLFKWEYTSPYKQTIVGDGQTVWLYDVDLAQVTKS
                     SQDQAIGGSPAAILSNKTALESSYTLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKG
                     GNLAAMQLKDSFGNQTSISFGGLNTNPQLSRGAFKFTPPKGVDVLSN"
     gene            2696..3835
                     /locus_tag="WJJ54_000288"
     CDS             2696..3835
                     /locus_tag="WJJ54_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ7341204.1"
                     /translation="MKKTLVAAAILSLALTACGGGSDTAAQAPSAKPEAEQSGKLNIY
                     NWSDYVDPETVAAFEKETGIKTRSDYYDSNETLEAKVLTGKSGYDLTAPSIANVGRQI
                     KAGAYQKIDKAQIPHYGNIDKDLLKMMEAVDPGNEYAVPYFWGINTLAINTRQVQKAL
                     GTDKLPENEWDLVFNPEYTAKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPEDIKA
                     AVDMMKAVRGDVKRFSSSGYIDDMAAGNLCAAIGYGGDLNIAKTRAEEAANGVEIKVL
                     TPKTGVGVWVDSFMIPRDAQNVANAHRYIDYTLRPEVAAKNGSFVTYAPASRPARELM
                     DEKYTSDASIFPNKELMEKSFIVSPKSAESAKLGVKLWQGLKAGK"
     gene            3968..4961
                     /locus_tag="WJJ54_000289"
                     /pseudo
     CDS             3968..4961
                     /locus_tag="WJJ54_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            5002..5532
                     /locus_tag="WJJ54_000290"
     CDS             5002..5532
                     /locus_tag="WJJ54_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEZ7341205.1"
                     /translation="MNAIRTFQNRTPEIHESCMIDEACVVIGEVSLAEDVSVWPCAVL
                     RGDVNSITVGARSNIQDGSVLHVSHKTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNR
                     VLVGMGSTVLDDAVIEDEVMIGAGSLVPPRKRLAGGYLYIGSPVRQVRVLTDEEKAFL
                     KYSAAHYVKLSKQYGM"
     gene            complement(5566..5682)
                     /locus_tag="WJJ54_000291"
     CDS             complement(5566..5682)
                     /locus_tag="WJJ54_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor domain protein"
                     /protein_id="HEZ7341206.1"
                     /translation="MPSKPEKRASDGIFACNSNADGQNQGASDTVIGCIPSA"
     gene            complement(5701..5888)
                     /locus_tag="WJJ54_000292"
                     /pseudo
     CDS             complement(5701..5888)
                     /locus_tag="WJJ54_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575226.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor"
     gene            complement(5907..7502)
                     /locus_tag="WJJ54_000293"
     CDS             complement(5907..7502)
                     /locus_tag="WJJ54_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEZ7341207.1"
                     /translation="MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGT
                     VKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVL
                     TAVDSALMVIDAAKGVEAQTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVENI
                     LQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRF
                     PLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPA
                     PKPRDATVRMVEPDEAKFSGFIFKIQANMDPKHRDRIAFLRVCSGRFERGMKMKHLRI
                     NREIAASSVVTFMSHDRELVEEAYAGDIIGIPNHGNIQIGDSFSEGEQLTFTGIPFFA
                     PELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSR
                     LANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVN
                     LGLTQERWPDIVFHETREHSVKL"
     gene            complement(7609..8004)
                     /gene="hisI"
                     /locus_tag="WJJ54_000294"
     CDS             complement(7609..8004)
                     /gene="hisI"
                     /locus_tag="WJJ54_000294"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HEZ7341208.1"
                     /translation="MDKNLLEAVKFDEKGLVCAIAQDAETKRVLMVAWMNAEALQKTV
                     ETGFAHYYSRSRQKQWMKGEESGHTQKVRELRLDCDGDAIVMLIAQNGGIACHTGRES
                     CFYKVWRGSAWETADAVLKDEKEIYGSTH"
     gene            complement(8035..8802)
                     /gene="hisF"
                     /locus_tag="WJJ54_000295"
     CDS             complement(8035..8802)
                     /gene="hisF"
                     /locus_tag="WJJ54_000295"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEZ7341209.1"
                     /translation="MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGDPVEAAKRYNGEG
                     ADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVS
                     INTAAVTRPDLIDEAAGFFGSQAIVAAVDAKAVNPGNTRWEIFTHGGRNPTGLDAVEW
                     AIEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGI
                     TEGKADAVLAAGVFHFGEIAIREAKRAMREAGIEVRL"
     gene            complement(8815..9552)
                     /gene="hisA"
                     /locus_tag="WJJ54_000296"
     CDS             complement(8815..9552)
                     /gene="hisA"
                     /locus_tag="WJJ54_000296"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEZ7341210.1"
                     /translation="MLLIPAIDLKEGRCVRLKQGLMEEATVFSDSPADTALHWFEQGA
                     RRLHLVDLNGAFAGVPQNLPAIKDILAAVAKDIPVQLGGGIRDLKTIGQYLDLGLNDV
                     IIGTAAVKNPDFVREACKAFPSRIIVGLDAKDGMAAIDGWATVTGHHVIDLAKRFEDD
                     GVNSIIYTDIGRDGMMSGVNIDATVKLAQAVRIPVIASGGLTGLDDIRALCAAEKHGV
                     AGAITGRAIYEGSIDFAQAQQLADSLD"
     gene            complement(9585..10223)
                     /gene="hisH"
                     /locus_tag="WJJ54_000297"
     CDS             complement(9585..10223)
                     /gene="hisH"
                     /locus_tag="WJJ54_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEZ7341211.1"
                     /translation="MQIAIIDYGMGNLHSVLKSVRTAGQLAGKNTEIFLSGDPERVSR
                     ADKVIFPGQGAMPDCIAALTRGGLDEAVKDALKNKPFFGICVGAQLLFDHSEEGNTDG
                     LGWFGGKVRRFERDLRDRQGCRLKVPHMGWNTVRQTQNHPLFKDIPQDTRFYFVHSYY
                     FDPENPETILGESDYPSPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW"
     gene            complement(10354..11856)
                     /gene="pta"
                     /locus_tag="WJJ54_000298"
     CDS             complement(10354..11856)
                     /gene="pta"
                     /locus_tag="WJJ54_000298"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEZ7341212.1"
                     /translation="MAKVLIVPVSAGLDASAAAQAFAKALDAQIFQAVDATAETLLAQ
                     GKSDDWFDALVGKVAALDAANLVIEGIAPDADKIYLAGKNVELALSLDAAAVFAVRSD
                     NADADELANRVNLAKQFFAAAPGVLEGFVVDGAAASVAEAAAEKTGLTFFGSSDALKD
                     VSVLAGREAKRLSPAQFRYNLIDFARQADKRIVLPEGAEPRTVQAAAICHEKGIARCV
                     LLAKREEVEAVAKERGISLPDSLEIIDPASLVEQYVGPMCELRKSKGLTPEDARKQLQ
                     DTVVLGTMMMAQNDVDGLVSGAVHTTANTIRPALQLIKTAPGASLVSSVFFMLLPNQV
                     LVFGDCAVNPNPTAQQLADIAIQSADSAKAFGIDPKVAMISYSTVNSGSGPDVDIVIE
                     ATKLAREKRPDLAIDGPLQYDAATVPGVGKSKAPGSPVAGQATVLVFPDLNTGNCTYK
                     AVQRSANVLSVGPLLQGLRKPVNDLSRGALVEDIVFTIALTAVQAKQMEG"
     gene            complement(12041..13099)
                     /gene="fbpC"
                     /locus_tag="WJJ54_000299"
     CDS             complement(12041..13099)
                     /gene="fbpC"
                     /locus_tag="WJJ54_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein FbpC"
                     /protein_id="HEZ7341213.1"
                     /translation="MTAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIVGASGCGKT
                     TLLRCLAGFEQPDFGEISLSGRTIFSKNTNLPVRERRLGYVVQEGVLFPHLTVYRNTA
                     YGLGNGKGKTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELI
                     LLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRIL
                     QTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCGLGRLPVQSGAPAGTRGTL
                     LIRPEQFSLHPHSAPTASIHAVVLKTTPKARHTEISLRVGQTVLTLNLPSAPTLSDGI
                     SAVLHLDGPALFFPGNTL"
     gene            complement(13120..14637)
                     /gene="fbpB"
                     /locus_tag="WJJ54_000300"
     CDS             complement(13120..14637)
                     /gene="fbpB"
                     /locus_tag="WJJ54_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease FbpB"
                     /protein_id="HEZ7341214.1"
                     /translation="MSPKKIPIWLTGLILLIALPLTLPFLYVAMRSWQVGINRAVELL
                     FRPRMWDLLSNTLTMMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAF
                     VSCFTWISLTFRVEGFWGTVMIMSLSSFPLAYLPVEAALKRISLSYEEVSLSLGKSRL
                     QTFFSAILPQLKPAIGSSVLLIALHMLVEFGAVSILNYPTFTTAIFQEYEMSYNNNTA
                     ALLSAVLMAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLKLPGQIGAIVFLSSL
                     LTLGIIIPFGVLIHWMMVGTSGTFALVSVFDAFIRSLSVSALGAILTILCALPLVWAS
                     VRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPAVYQTFIVVILAYFMLYLP
                     MAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFALVFLKLMKE
                     LTATLLLTTDDVHTLSTAVWEYTSDAQYAAATPYALMLVLFSGIPVFLLKKYAFK"
     gene            complement(14705..15700)
                     /gene="fbpA"
                     /locus_tag="WJJ54_000301"
     CDS             complement(14705..15700)
                     /gene="fbpA"
                     /locus_tag="WJJ54_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     FbpA"
                     /protein_id="HEZ7341215.1"
                     /translation="MKTSIRYALLAAALTAATPALADITVYNGQHKEAAQAVADAFTR
                     ATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPASTIN
                     ETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWKNRIGYAPT
                     SGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGEIDAALINNYY
                     WHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLASKEG
                     QRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATRLLEQAGMK"
     gene            complement(15951..16421)
                     /locus_tag="WJJ54_000302"
     CDS             complement(15951..16421)
                     /locus_tag="WJJ54_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4375 domain-containing protein"
                     /protein_id="HEZ7341216.1"
                     /translation="MTDTDTQADRFEQMMWQAVDKLFEQHDGKLESMDGREQELVLIW
                     RTEADIGNGGILQFVCNWGFPAAEKTCSVLKKIGAIHSAMLIHRAADALRKEIRHLQS
                     EGKNLKEMWDITKHLDNKTASLPNSLDEQYWQDPDKLYLPGWQYYSGNPVQTLF"
     gene            complement(16478..17854)
                     /gene="argH"
                     /locus_tag="WJJ54_000303"
     CDS             complement(16478..17854)
                     /gene="argH"
                     /locus_tag="WJJ54_000303"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEZ7341217.1"
                     /translation="MHDKTWSGRFNEPVSELVKQYTASIGFDRRLAEWDIQGSLAHAQ
                     MLKETGVLDEGDLADIRQGMAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGK
                     RLHTGRSRNDQVATDIRLWLRDQITVIQNLIQNLQTALLDLAEQNAETVMPGFTHLQV
                     AQPVSFGHHMLAYVEMLGRDNERMADCRRRVNRMPLGAAALAGTTYPIRREITAELLG
                     FEQICQNSLDAVSDRDFAVEFTAAASLIMVHLSRLSEELILWMSPRFGFIDIADRFCT
                     GSSIMPQKKNPDVPELVRGKSGRVIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTAD
                     TLIDTLRIYADMMRGVTVKPDNMRAAVMQGFATATDLADYLVKKGMPFRDAHEVVAQA
                     VRHADEAGVDLSELPLEVLQGFSDLIADDVYGVLTPEGSLNARNHLGGTAPEQVRFQV
                     KRWREMSA"
     gene            complement(17873..18742)
                     /gene="galU"
                     /locus_tag="WJJ54_000304"
     CDS             complement(17873..18742)
                     /gene="galU"
                     /locus_tag="WJJ54_000304"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEZ7341218.1"
                     /translation="MKPIKKAVFPVAGIGTRFLPATKASPKEMLPIVDKPLIQYAVEE
                     AVEAGCTEMVFVTGRNKRSIEDHFDKAYELETELEMRHKDKLLEHVRNILPPNITCLY
                     IRQAEALGLGHAVLCARAAIGDEPFAVILADDLIDAPKGALKQMVEVYGRSGNSILGV
                     ETVEPSQTGSYGIVETEQLKQFQRITGIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     NLPRGAGNEIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGHLEATVAYGLKHPETG
                     EPFRRLLEKYRTE"
     gene            complement(18770..19369)
                     /gene="rdgB"
                     /locus_tag="WJJ54_000305"
     CDS             complement(18770..19369)
                     /gene="rdgB"
                     /locus_tag="WJJ54_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEZ7341219.1"
                     /translation="MSEKPEKIVLASGNAGKLEEFGNLFKPYSITVLPQSTFGIPECP
                     EPYSTFVENALAKARHAAKYSGLPALADDSGICAAALNGAPGIHSARYAGSNPKSDTA
                     NNLKLAAELAGKADKSCCYVCVLVFVLHKDDPRPIIAEGVWHGQWNGVPAGENGFGYD
                     PYFYLPGHGKTAAELDSEVKNRESHRAQALADLIHKLAL"
     gene            complement(19362..19595)
                     /locus_tag="WJJ54_000306"
     CDS             complement(19362..19595)
                     /locus_tag="WJJ54_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341220.1"
                     /translation="MNRRKIYLLSVALFTLAFMLLVLLGAYLLTVGSKAFAVASFLFA
                     FGALFGQIGSLALYLRHKSLRAAQSAAKENRYV"
     gene            complement(19703..20236)
                     /locus_tag="WJJ54_000307"
     CDS             complement(19703..20236)
                     /locus_tag="WJJ54_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEZ7341221.1"
                     /translation="MADFNQILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLD
                     RVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGE
                     VDDKIVCVPADDRNNGNAYKTLSDLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGDAE
                     EAKKVIKESIERWNKQA"
     gene            complement(20338..20796)
                     /gene="nudB"
                     /locus_tag="WJJ54_000308"
     CDS             complement(20338..20796)
                     /gene="nudB"
                     /locus_tag="WJJ54_000308"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HEZ7341222.1"
                     /translation="MPMAKPLKYPVSALVVLYSGDGGILLIERTHPKGFWQSVTGSLE
                     PGETVAQTAKREVWEETGILLADEQLQDRHDSTVYEIYHHWRHRYPKGVFENREHLFS
                     AEIPRDTPIALQPEEHVSYGWFGLEEAAEKVFSPSNRRAILELGRFLGKR"
     gene            21007..21083
                     /locus_tag="WJJ54_000309"
     tRNA            21007..21083
                     /locus_tag="WJJ54_000309"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21041..21043,aa:Pro,seq:ggg)
     gene            21241..23151
                     /locus_tag="WJJ54_000310"
     CDS             21241..23151
                     /locus_tag="WJJ54_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223961.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HEZ7341223.1"
                     /translation="MGISRKISLILSILAVCLPMHAHASDLANDSFIRQVLDRQHFEP
                     DGKYHLFGSRGELAERSGHIGLGNIQSHQLGNLMIQQAAIKGNIGYIVRFSDHGHEVH
                     SPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGYPAPKGARDIY
                     SYDIKGVAQNIRLNLTDNRSTGQRLADRFHNAGAMLTQGVGDGFKRATRYSPELDRSG
                     NAAEAFNGTADIVKNIIGAAGEIVGAGDAVQGISESSNIAVMHGLGLLSTENKMARIN
                     DLADMAQLKDYAAAAIRDWAVQNPNAAQGIEAVSNIFTAVIPVKGIGAVRGKYGLGGI
                     TAHPVKRSQMGAIALPKGKSAVSDNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITS
                     STVPPSNGKNVKLADQRHPKTGVPFDGKGFPNFEKHVKYDTKLDIQELSGGGIPKAKP
                     VFDAKPRWEVDRKLNKLTTREQVEKNVQEIRNGNINSNFSQHAQLEREIKKLRTSEGK
                     ANSASAALLTLDLKTAQAANQVVESLRSTGNLPSNYITKSQAISMGWRPGKALGNTIK
                     NGQLGGDIFANSTNILPAKQGRIWYEADIGLINTMSRSNQAGTRLLYSNDGLLYITTD
                     HYISAIQIGTWK"
     gene            23163..23450
                     /locus_tag="WJJ54_000311"
     CDS             23163..23450
                     /locus_tag="WJJ54_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="barstar family protein"
                     /protein_id="HEZ7341224.1"
                     /translation="MQLEIIGSKIYTEQDFHNQISKIFSIQDYYGNNLDALWDLLSTN
                     VERPITLVWKDAMFSKNQLENIFIEIVNVLERVKKQDEDYGFEEKFNYILE"
     gene            23946..25202
                     /locus_tag="WJJ54_000312"
     CDS             23946..25202
                     /locus_tag="WJJ54_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
                     /protein_id="HEZ7341225.1"
                     /translation="MKSKSGVIASLTGAAVGGTPVDAQTGGAVGQNAVENNLYLTSEA
                     LKKDKQTARKIYSVIKEQVKHECSSTGRITECRQNIGRIIEFTQDKRFDSRFKDLKKE
                     SLYYLNKHPDLVASYLKAEYEKLDREDKSILHRYISPGAEIVSGSLGVVLSGVAGGGS
                     CAETFGLGCAAALVGVTSSYDHVITGTKNFGKKASEQRPTIAVQALKQLGLSEQAAEY
                     VQFSIDLFSVGKSGGGIPKAKPVFDAKPRWEVDRKLNKLTTREQVEKNVQETRRRSQS
                     SQFKAHAQREWENKTGLDFNHFIGGDINKKGTVTGGHSLTRGDVRVIQQTSAPDKHGV
                     YQATVEIKKPDGSWEVKTKKGGKVMTKHTMFPKDWDEARIRAEVTSAWESRIMLKDNK
                     WQGTSKSGIKIEGFTEPNRTAYPIYE"
     gene            25233..25652
                     /locus_tag="WJJ54_000313"
     CDS             25233..25652
                     /locus_tag="WJJ54_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341226.1"
                     /translation="MKRIKCFCDKFPSGDTFRMCIILDDYDNRVDYYVGIYDYITSTL
                     MSDIYYRSTIDEHFKIIELIENNPNEIYDDGGGQQFCLEFHHDKVIFYHNEFDEEDGY
                     PVLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            25689..26663
                     /gene="mafB"
                     /locus_tag="WJJ54_000314"
                     /pseudo
     CDS             25689..26663
                     /gene="mafB"
                     /locus_tag="WJJ54_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258126.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
     gene            26674..27135
                     /locus_tag="WJJ54_000315"
     CDS             26674..27135
                     /locus_tag="WJJ54_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341227.1"
                     /translation="MNLETAENIQCEFEYLALDGYFPMHFASHGQGNKDWQFAVEFIY
                     RLLICQLATLEPINFETKNDILDFCHNLAKQSPFNNDNEVWYKGEIVLTKKGIDLIKE
                     YIPEAFEEWNGKKFELNIPFIKILKNIFVNYEVAWDENNPLFPIISLNLGT"
     gene            27161..27409
                     /locus_tag="WJJ54_000316"
     CDS             27161..27409
                     /locus_tag="WJJ54_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
                     /protein_id="HEZ7341228.1"
                     /translation="MEIKKPDGSWEMKKGRGGKPMTNHSMFPKDWDEARIRAEVTSAW
                     EKRKELEGQKWRGTSKSGVEIEGFTEPNRTAYPLYNSK"
BASE COUNT         6597 a         6488 c         7799 g         6673 t
ORIGIN      
        1 tttgtggggc ggatattttt caggactgta ttttgtccag acattcgagc agatcgagcg
       61 gcgtgcggat gtggaaatcc gcctgccatg agccggtatc gtcttcggga gcgatgtagc
      121 cccattcggc gaggacggtt ttcatgccgg cgttgcggcc tgcttggatg tcgcgttcgg
      181 catcaccgac gtagagtgtg tgttgcgggt cggcgtggat ttgtccgcac gcatacagca
      241 tgggtttgac gctgggcttg ggttcgccgc aggtgtcgcc gctgacgacg acggcgggtg
      301 ggatgatgaa gccgagtttg ggggcgagtt tgtcggtgaa gcgcatgggt ttgttggtga
      361 tgatgcccca tttgatgccg cgtctgtcga gttcggcgat gagttcgttt acgccgtcaa
      421 agagctcggt gtcttgggcg tagcggctgt cgtattcgtc aaggtattcg gtgcgccatc
      481 gggcatagtc ggggtggtcg ggggtgatgc ctgcgccgag tttgagcagt cctgccgcgc
      541 cgtggctggc ttggttgcgg atttcgtcca tgcttttggg cggcagtccg tggcgggcga
      601 gcagggtatt gagtgcgccg ccgaggtcta gggcggtgtc ggcaagcgtg ccgtcgaggt
      661 cgaagagtac ggcgtgtatc atgtgtgttc cttttcagac ggtatttttg ttctgtttca
      721 aaccctgctc gaaatcttcc aacatatcca attcaaagcg gctgaagccc gctttttccc
      781 gcgcttcgat gttcacatag ccacggaaga taaacatatc gtaacgggta atcagactgc
      841 ggaacagggc gacaggttcc aaaccgcgtt cgcggcagag gtgttgatac caatggttgc
      901 cgatggcgac atggcccact tcgtcgcggt aaatgatgtc caatacgccg caggtttccg
      961 aatcgccgcg ctgcgccacc ttcgcgcgta tccccggcgt aacgtccagc ccgcgcgctt
     1021 ccaacacgcg cggtaccaac gccatacgca acagtgggtc gtaggcggtt ttgtacgcca
     1081 tatcccacaa atggttgtgc gcctcgaaac tgccgtaatc gaagccgaaa gcgcgcaatc
     1141 tgtcgcgcat caggcggaaa tggtacacct cttccttcgc cactttcacc cagtcgcgga
     1201 caaactgaaa cggcagcgtg cggaaacggt atgccgcgtc caaagccaga ttgacggcgt
     1261 tgaactcgat atgcgcaatc gcgtgcagca tcgccgcata gccttctgcc gtgttcattt
     1321 tgcgcggggt cagttgtgac ggcgcgacca aaaccggctt gtccggccgt cccgcgcggg
     1381 ggaaatctgc cggtggcgcg tttgtttccg ccccgtccgc attttgaacg gcggcaaacg
     1441 cctcatccgt cagccgtcct ttttcatcgg ggtcgcccga aagcagggcg cgttccagca
     1501 aagcataaat atcgggtttc atttcaagtc cgccgtgttc ggaaaacaaa tattatagcg
     1561 tttaaaaaaa acaagatgag gcatataatc tccgcgattc ggcattccgc gcccaaaccg
     1621 tcaaatcacg cggcacacaa ttaaagggca gcgtggcgcg cctacctttt ccgagcggtc
     1681 aaaaaaatca gccctcggaa aacgctgttt gtaaaatgca aaccgcccgt aacgccgccc
     1741 gtatgattgt tttgccgcgc cgatacttta cgccacaccc atcccaacaa ggaaaaataa
     1801 tgatgaaacc gcacaacctg ttccaatttc tcgccgtttg ctccctgatc gtcgccgtcg
     1861 cttccgcaca ggcgggcgcg gtagacgcgc tcaagcaatt caacaacgat gccgacggta
     1921 tcagcggcag cttcacccaa accgtccaaa gcaaaaagaa aacccaaacc gcgcacggca
     1981 cgttcaaaat cctgcgcccg ggcctcttca aatgggaata cacttcgcct tacaaacaga
     2041 ctattgtcgg cgacggtcaa accgtttggc tctacgatgt cgatttggca caagtgacca
     2101 agtcgtccca agaccaggcc ataggcggca gccccgccgc catcctgtcg aacaaaaccg
     2161 ccctcgaaag cagctacacg ctgaaagagg acggttcgtc caacggcatc gattatgtgc
     2221 tggcaacgcc caaacgcaac aatgccggct accaatacat ccgcatcggc ttcaaaggcg
     2281 gcaacctcgc cgccatgcag cttaaagaca gcttcggcaa ccaaacctcc atcagtttcg
     2341 gcggtttgaa taccaatccc caactctcgc gcggcgcgtt caagtttacc ccgcccaaag
     2401 gcgtggacgt gttgagcaac tgatgccgtc cgccccgatg ccgtctgaaa gccgccgagg
     2461 cttcagacgg cattttcacg caggcggaac aatgtcccgc attaccgccc gatcgggcat
     2521 cggaacggca aacccgtgaa aattaacggt tgcgccccgg ctgtttttgc cgtttaatgc
     2581 aaaccttgct gcaccaaggg ccaagaaagc cgaccggccg cccccacagc ttccgatgca
     2641 ggcggcccgg ccgtccctgc aatgtttttt atttttgaac gaaaggtcga aaaccatgaa
     2701 aaaaacactg gtggcggcgg caatcctgag cctcgccttg actgcgtgcg gcggcggaag
     2761 cgataccgcc gcccaagccc cctccgccaa gcccgaagcc gaacaatcgg gcaaactcaa
     2821 tatctacaac tggtcggatt atgtcgatcc cgaaaccgtc gccgcctttg aaaaagaaac
     2881 cggcatcaag acgcgttccg attattacga cagcaacgaa acactggagg caaaagtcct
     2941 gaccggcaaa tccggctatg acctgactgc gccgtccatc gccaacgtcg gccggcaaat
     3001 caaagcgggc gcgtatcaga aaatcgacaa ggcgcaaatc ccccattacg gcaacatcga
     3061 taaagatttg ctgaaaatga tggaagccgt cgatccgggc aacgaatacg ccgtccccta
     3121 tttctggggc atcaacacct tggcaatcaa cacgcggcag gtgcaaaagg cattgggtac
     3181 ggacaagctg cccgaaaacg aatgggattt ggtgttcaac cccgaataca ccgccaaact
     3241 caaatcctgc ggcatcagct atttcgacag cgcaatcgaa cagattccct tggcgttgca
     3301 ctatttgggc aaagacccca acagtgaaaa tcccgaagac atcaaagccg ccgtcgatat
     3361 gatgaaagcc gtccgaggcg acgtgaaacg cttcagctct tccggctata tcgacgatat
     3421 ggcggcgggc aacctgtgtg ccgccatcgg ttacggcggc gatttgaaca ttgccaaaac
     3481 ccgtgccgaa gaagccgcaa acggcgtgga aatcaaagta ttgaccccga aaaccggcgt
     3541 gggcgtgtgg gtggattcct ttatgattcc gcgcgacgcg caaaacgtcg ccaacgccca
     3601 ccgctatatc gactacacgc tccggcccga ggtggcggcg aaaaacggca gcttcgttac
     3661 ctacgcgccc gccagccgtc ccgcgcgcga gctgatggat gaaaaataca cctccgacgc
     3721 atcgattttc ccgaacaaag aactgatgga aaaaagtttc atcgtatcgc ccaaatccgc
     3781 agaatccgcc aaactgggcg tgaagctgtg gcaagggctc aaggccggaa aataaccgca
     3841 ccccctgccg tctgaaacct ttcgggcggc aggaaacagc gcgtccgtta tcaaacaggg
     3901 gggcgtttcc cctcctgccg gttatgattg ggttaagatt aaaatgattt agtaaaatga
     3961 gaaagatatg gatttaagta tcgtagttcc catttataat gtcgaaagtt atttggaagc
     4021 gtgtttaagt tccatagaac ctatattaag taatgaaaat gtcgaactta tccttgtgaa
     4081 tgacgggtca aaagacggaa gtgaagatat atgttataaa tatatagata aaacaacaaa
     4141 caacaaacaa cacccgatac cgaacaccaa acatcaaata tatatatcag gataaccaag
     4201 gattgtcggg ggcgagaaat accggaataa aaaattcaaa cggaaaatat atagtcttta
     4261 ttgattcaga tgattttatt aattgtcagg tcttgctgga ttttcttagt aaagatgata
     4321 ttgatatgcc ggatgtggtt tttttaaatg cagttaaata tgataaggga agtgtttcac
     4381 attttggcga agattatcag cctgaaaaaa tactcaatca atccaaagtc gaagttttga
     4441 aaggattatg ccgatttaga aaatttccgg gttcggcgtg taataagatt ataaaaaggg
     4501 aattgattat caaagaaaaa ctgttttttg aaaaagaggt ttatgccgaa gatatcgaat
     4561 ggtcaatgag attatttaat gcggcaacaa ctttttctta tttggacggt tgttattact
     4621 attatcggca gggaagaaaa gattctaaaa caggaactgt ttcggaaaaa agtataaagt
     4681 cattattata tattttggag aaaaatgcgg aaatggaatt tgatagggat atatcaagtt
     4741 atctttattc ttttctttcc tacgaatatc tcgttttgct ttttatcatg acgagtaaaa
     4801 atatagagtg tgatgctgat ataaaaagaa gggcgtatca tttaaggttt atgctgttaa
     4861 agtccaataa attgatatat aagctgatat tcccgataat cacattattc ggggtcgata
     4921 ttacaggcag gattttaaaa gcaatcaggg ggaatattta ataaatcctt taacactata
     4981 catcttaccg aaggaggaaa aatgaacgca atccgaactt tccaaaaccg cacgcccgaa
     5041 atccacgaaa gctgtatgat agacgaagcg tgcgtcgtca tcggcgaagt gtcgcttgcc
     5101 gaagacgttt ctgtgtggcc gtgcgccgtg ttgcgcggcg atgtgaacag catcaccgtc
     5161 ggcgcgcgca gcaatataca ggacggcagc gtcctgcacg tttcccacaa aaccgccgcc
     5221 aaacccgaag gatcgccgct ggttatcggc gaagacgtta ccgtggggca caaagtgatg
     5281 ctgcacggct gccgaatcgg caaccgcgtc ttggtcggta tgggcagcac cgttttggac
     5341 gatgctgtga ttgaggacga agtgatgatc ggcgcgggca gcctcgttcc gccgcgcaaa
     5401 cgcttggcgg gcggctacct ttatatcggt tcgccggtca gacaagtgcg cgtgctgacc
     5461 gatgaggaaa aagccttttt gaaatattcc gccgcgcatt atgtgaagct gtcgaaacag
     5521 tacgggatgt gaaatcacat cggcgttctt gcgtcagccc caaattcatg cggacgggat
     5581 gcatccgata acggtatccg atgcgccttg attttgaccg tctgcgtttg agttgcaggc
     5641 aaaaatgccg tctgaagccc ttttttcggg tttagacggc attttatcgc cgattgcttt
     5701 ttacagtttg accgaatgtt cgcgcgtttc gtggaacacg atgtccggcc aacgttcttg
     5761 cgtcagccct aaattcatgc ggacgggatg cccgataacg gtatccgatg cgccttgatt
     5821 ttgatcggtg catttgagtt gcaggcaaaa atgccgtctg aagccctttt ttcgggttca
     5881 gacggcattt tattgccgat tgctttttaa agtttgaccg aatgctcgcg cgtttcgtgg
     5941 aacacgatgt ccggccagcg ttcttgcgtg agtcccagat tcacgcggtt aggggcgagg
     6001 taggcgaggt tgccgcccgc gtcgatggcg aggttgcctg cattggcttt ttcaaattcc
     6061 gccagttttt tcttgtcgtc gcacgatacc cagcgcgccg accagatgga tgcgctgtcg
     6121 aacacggctt ctacgccgta ttcgttggcc agccgcgagg taacgacttc aaattgcaac
     6181 acgccgaccg cgcccaaaat caaatccgcg ccgctcatcg gtttgaaaac ctgtaccgcg
     6241 ccttcttcgc cgagttgttg caaacctttt tgcagttgct tgattttcag cgggtttttg
     6301 atgcggacgc tgcggaacag ttcgggcgcg aagaatggga tgccggtaaa cgtcagttgt
     6361 tcgccttcgg agaagctgtc gccgatttgg atgttgccgt ggtttgggat accgataatg
     6421 tcgccggcgt aggcttcttc aaccagctcg cggtcgtggg acatgaaggt taccacgctg
     6481 gaggcggcga tttcgcggtt gatacgcagg tgtttcatct tcataccgcg ctcgaatctg
     6541 ccggagcaga cgcgcaagaa ggcgatgcgg tcgcggtgtt tcggatccat attggcttgg
     6601 attttaaaga taaatccgga aaacttagcc tcgtccggct cgaccatacg tacggtcgcg
     6661 tcgcgcggtt tcggcgcggg cgcccagtca attaatgaat tgaggatttc ctgaataccg
     6721 aagttgttaa tcgcagagcc gaagaatacg ggcgtgagtt cgccggcgag gaattcgtcg
     6781 agattaaact cgttggaagc cgcctgcacc aattcgattt cgtcgcgcaa ctgttggatt
     6841 tccaatggaa agcgttgttc caattcggga ttgtctatgc ctttgatgat gtcgaactcg
     6901 tgcggcaggc gttcgccgcc cgcttcaaag agatagattt cgtcgttcag gatgtggtac
     6961 acgcctttga agtttttgcc cataccgatt ggccaggtga cgggcgcgca gcggatttgc
     7021 aggatgtttt ccacttcgtc cagcaattcc agagaatcgc gtacttctcg gtcgtatttg
     7081 ttcatgaacg taacaatcgg cgtatcgcgc aggcggcaga cgtttaagag cttgatggtt
     7141 tgcgcttcca cgccttttgc cgcgtcgatg accatcaacg cgctgtccac ggcggtcaaa
     7201 acgcggtagg tgtcttctga gaaatcttgg tgtcccggcg tgtccaagag gttgacggtg
     7261 tggtctttat agtcgaactg catcacgctt gatgccacgg aaatgccgcg ctgcttctcg
     7321 atgtccatcc agtcggaagt ggcgaatttg ccggtttttt tgccttttac cgtacccgcg
     7381 ctttgaatcg cacctgaaaa cagcaagagt ttttcagtca acgtggtttt acctgcgtca
     7441 gggtgggaga tgatggcaaa cgtgcggcgg cggcgcactt ggtcgaggat ttcttgggac
     7501 atggttttct ttgcaaaaag gttcaggccg cttttcagac ggcccggaca gtgtttgaga
     7561 cggcgaaatt gtacaaaaaa atgcctgata attcaatgtt ggaggcggtc agtgcgtgct
     7621 gccgtaaatc tctttttcgt ctttcaggac ggcatcggcg gtttcccacg cgctgccacg
     7681 ccagactttg taaaagcagc tttctcgccc ggtgtggcag gcgatgccgc cgttttgggc
     7741 gatgagcatc acaatggcgt cgccgtcgca gtcgaggcgc agttcgcgga ctttttgcgt
     7801 gtgtcccgac tcttcgccct tcatccattg tttttggcgc gaacggctgt aatagtgggc
     7861 aaagccggtt tcgacggttt tttgcagggc ttcggcgttc atccacgcca ccattaaaac
     7921 acgtttggtt tcggcatctt gggcgatggc gcaaaccaaa cctttttcgt caaatttgac
     7981 ggcttcaagc aggtttttat ccatattttc tttcagacgg catggtcggg gcggtcagag
     8041 gcgcacttcg atgccggctt cgcgcatagc gcgtttggct tcgcggatgg cgatttcccc
     8101 gaaatggaaa acgccggcgg caagtacggc atcggctttg ccttcggtta tgccttcaat
     8161 caggtgccgg acattgccga ccccgccgga ggcgatgacg gggatgtcga cggcttcggc
     8221 aacggcgcgg gtcagcggca ggttgaaacc ctgtttcgta ccgtccctgt ccataccggt
     8281 aagcaggatt tcgcccgcgc cgcgtttttg catttcgatc gcccattcca ccgcatccaa
     8341 accggtcgga ttgcgcccgc cgtgggtaaa gatttcccag cgtgtgtttc cggggttgac
     8401 ggctttggca tcgacggcgg cgacgatggc ttgcgaaccg aaaaatccgg cggcttcgtc
     8461 aatcaggtcg ggacgggtaa cggcggcggt gttgatgctg actttgtccg cgccggcatt
     8521 gagcaggcgg cggatgtcgg caacggtgcg tacgccgccg ccgacggtca gggggatgaa
     8581 gacttgtccg gcaacctctt cgatgatgtg caggatggtg tcgcggttgt cggatgaggc
     8641 ggtgatgtcg aggaaggtca attcgtccgc gccttcgccg ttgtagcgtt tggcggcttc
     8701 gacggggtcg cccgcgtcgc gcaaaccgat gaagttcacg cctttgacga cgcgcccgtc
     8761 ttttacgtcg agacagggga tgatgcgttt tgccagtgcc ataatcggat gcctttagtc
     8821 gagggaatct gccagttgct gcgcttgggc aaaatcgatg ctgccctcgt aaatcgcgcg
     8881 gccggtaatc gcgcctgcta cgccatgttt ttcggcggca cacagggcgc ggatgtcgtc
     8941 caagccggtc agtccgccgg aggcgatgac gggaatgcgg acggcttggg cgagtttgac
     9001 cgtcgcgtcg atgttcacgc cgctcatcat accgtcgcgc ccgatgtcgg tgtagatgat
     9061 gctgttgacg ccgtcgtctt caaagcgttt tgccaaatca attacatgat gcccggttac
     9121 ggttgcccag ccgtcgatgg cggccatacc gtctttggca tccagcccga caataatcct
     9181 gctggggaag gctttgcacg cctcgcgcac gaagtcgggg tttttgaccg ccgccgtgcc
     9241 gataatcacg tcgttcagac ccaaatccaa atattgtccg atggttttca aatcgcgtat
     9301 gccgccgccg agctgtacgg ggatgtcttt ggcgacggcg gcaaggatgt ctttgatggc
     9361 gggcaaattt tgcggcacgc cggcaaacgc gccgttcaaa tccaccagat gcaggcggcg
     9421 cgcgccttgt tcaaaccagt gcagcgcggt gtcggcgggc gaatcggaaa agacggtcgc
     9481 ctcttccatc agcccttgtt tcaggcggac gcagcgtcct tctttcaaat cgatggcggg
     9541 tatcagcagc atagtttttc tccttgtgcg gggccgtgtc cggcttacca gtttaaaaag
     9601 tttttcaaca tcgtcagccc ggcatcgtgg cttttttcgg tgtgaaattg cgtggcgaat
     9661 acgttgtctt tgccgacgat gcaggcaaac ggggacgggt agtcgctttc gcccaatatg
     9721 gtttcgggat tttcggggtc gaaatagtag ctgtggacga agtaaaaacg cgtgtcttgg
     9781 ggaatatctt taaacagcgg gtggttttgg gtttggcgca cggtgttcca gcccatatgc
     9841 gggactttca gacggcatcc ctgccggtcg cggaggtcgc gctcaaagcg tctgactttg
     9901 ccgccgaacc agcccaagcc gtcggtgttt ccttcttcgc tgtggtcgaa taaaagttgc
     9961 gcgccgacgc agattccgaa aaagggtttg ttttttaagg catctttgac tgcctcgtcc
    10021 aagccgccgc gcgtcagtgc cgcaatacag tcgggcatcg cgccctgccc gggaaaaatg
    10081 actttgtcgg cgcgggacac gcgttcgggg tcgccgctta aaaagatttc ggtatttttt
    10141 ccggcaagct gccccgccgt ccggacggat ttcaatacgg aatgcaggtt gcccataccg
    10201 taatcgataa tggcgatttg catggcttcc tcctcttttt ttgcaatatg gctgcgattt
    10261 taacaaacaa atgtgccgtg ctgataaaaa tgccgtctga aaacgggagt ctgtcttcag
    10321 acggcatagg gtttaaaccc ggaaagccgt ttgtcagcct tccatttgtt ttgcctgaac
    10381 ggcagttagg gcgatggtga acacgatgtc ttccaccagc gcgccgcgcg acaggtcgtt
    10441 gaccggtttg cgcaggcctt gcagcagcgg gccgacgctt aagacgttgg cactgcgttg
    10501 gacggcttta taggtgcagt tgccggtgtt caggtcgggg aagaccaaaa cggttgcctg
    10561 tcctgccacc gggctgcccg gagctttgga tttgcccaca cccggcacgg ttgccgcatc
    10621 atattgcagc gggccgtcga tggcgaggtc ggggcgtttt tcccgggcaa gtttggttgc
    10681 ttcgatgacg atatcgacat cggggccgct gccggagttg acggtggagt aggaaatcat
    10741 cgccactttc gggtcgatgc cgaaggcttt tgcggaatcg gcagactgga tggcgatgtc
    10801 ggcaagctgt tgcgcggtcg ggttcggatt aaccgcgcag tcgccgaaga cgaggacttg
    10861 gttgggcagc agcataaaga atacgctgga cacgaggctt gcgcccggtg cggttttaat
    10921 cagttgcaaa gcggggcgga tggtgttggc ggtggtgtga accgcaccgg ataccaaacc
    10981 gtccacatca ttttgcgcca tcatcatcgt accgagtacc acggtgtctt gcagttgctt
    11041 gcgcgcgtct tcgggtgtca ggcctttgga tttgcgcagt tcgcacatcg gtccgacgta
    11101 ttgttcgacc aatgaggcgg gatcgatgat ttccaaagag tcgggcaggc tgataccgcg
    11161 ttctttggca acggcttcga cttcttcgcg tttggcaagc aggacgcagc gggcaatgcc
    11221 tttttcgtgg cagatggcgg cggcttggac ggtgcggggt tctgcgcctt caggcaggac
    11281 gatgcgtttg tcggcttggc gggcgaagtc gatcaggttg tagcggaatt gcgccggcga
    11341 caggcgtttt gcttcgcggc ctgccaatac ggatacgtct ttcagcgcgt cgctcgaacc
    11401 gaagaaggtc aggccggttt tttcggctgc cgcttcggca acggaggctg ccgcgccgtc
    11461 cacgacaaaa ccttccaata cgcccggcgc ggcggcgaag aactgtttgg caaggttcac
    11521 ccgatttgcc agttcgtcgg catcggcgtt gtcggaacgg acggcgaaga cggctgccgc
    11581 gtcaagggac aatgccagtt cgacgttttt gcctgcgagg tagattttgt cggcatcggg
    11641 cgcgatgcct tcgatgacga ggttggcggc atcgagtgcg gcaactttgc cgaccagtgc
    11701 gtcgaaccag tcgtcgcttt tgccttgcgc gagcagggtt tcggcggttg cgtcaacggc
    11761 ttggaaaatt tgtgcgtcca gtgcttttgc aaaggcttgt gcggcggcgg aggcgtccag
    11821 tccggcagat acgggtacga tgagtacttt tgccatgata tatcctttcg tatgctgcgg
    11881 tgtgcggcat atgtggttgg aaggggcggc atataggcag aaacggctgc ctgcgtgccg
    11941 tgcgtgccgt gtttggcttg aggcgcgcag gttgaatata gcaaacaaat tctgtttcca
    12001 acaagataaa tatccgcagg cttgtggatg ctgccgcctt tcagagggta tttccgggga
    12061 agaacagggc gggaccgtcc aaatggagga cggcggaaat gccgtctgac agggtggggg
    12121 cggaagggag gttgagcgtg aggacggttt gtccgacccg gagactgatt tcggtatgcc
    12181 gcgctttggg cgtggttttg agaaccacgg cgtgaatgga ggcggtgggt gcggaatggg
    12241 ggtgaaggct gaactgttcc ggacggatga gcagtgtgcc gcgtgtgcct gcgggtgcgc
    12301 cgctttgaac gggcaggcgg cccaatccgc aatcggcggt gccgtcggcg ttgagcgcgg
    12361 cggggaacac gatgccttcg ccgataaaca gggcggcatc aaggtcggca ggttgtcggt
    12421 acaattcgtg agggcttgca gtttggagga tgcgcccctg tttcatcacg gcaatccggt
    12481 cggcgtattg cagggcttct tcgcggtcgt ggctgacgaa aacggcagat ttgccgttgg
    12541 cgcgcagggc ggcaatcatg tcttcgcgaa tctggcggcg caactgttcg tccagcgcgc
    12601 tgaagggttc gtccaacaaa atcagttcgg gatcgggtgc gagggcgcgg gcgagggcga
    12661 cgcgctgttg ctgtccgccc gaaagttcgt gcggatagcg tccggcaagt tcggaaatgc
    12721 cggtcaattc caacatagct tcgatgcgct gccgctcttg cgccgtcttg cctttgccgt
    12781 tgcccagccc gtaggcggtg ttgcggtaaa cggtcaggtg ggggaacagc acaccttcct
    12841 gtacgacata acccaaacgg cgttcgcgga cggggaggtt ggtatttttc gagaagatgg
    12901 ttctgccgga aagcgaaatt tcgccaaaat cgggttgttc aaaaccggca aggcagcgta
    12961 aaagggtggt tttgccgcag ccggacgcgc cgacgataaa gaggatttcg cccgggtcga
    13021 ggctgagcga aatgtcgttt aaaaccgggg tgttttgaaa acttttggac aggtgtccga
    13081 tgtgcagggc ggcggtcatg gcggtacttc ctcaagctgt tatttgaagg cgtatttctt
    13141 cagcaggaat acggggatgc cggaaaataa taccagcatc agcgcgtaag gggtggcggc
    13201 ggcgtattgt gcgtccgatg tgtattccca aacggcggtg gagagtgtgt ggacatcgtc
    13261 ggtggtcagc agcagggtgg cggtcagctc tttcatcagt ttgaggaaga cgagtgcgaa
    13321 tgcggcggta atgccgggca ggatggacgg cagtaccaac gtcctgaaaa taaagaagtg
    13381 tccgcgcccc aatgttgcgc cgacctgttc catccctttg gggagttgtt ccaaggaagt
    13441 cctcagggtg gtttgcgcca tcggcaggta aagcatgaaa taggcaagga tgacgacgat
    13501 aaaggtttgg taaacggcag gggtgtagtt gatgctgaaa taaaccaagg atagggcgat
    13561 aaccaaaccg gggacggcgt gcagtaaaaa cggcagcctg tctatccaaa cggttaaaaa
    13621 attgcgatag cgaaccgatg cccaaacaag gggcaaggca cataatatag tcaaaatcgc
    13681 acctaaagcc gatacgctta aggaacggat aaaggcatca aatacggata cgagcgcgaa
    13741 tgtgccggaa gtgccgacca tcatccaatg tatcaatacg ccaaagggga taataatgcc
    13801 caaagtcaac aagctgctta aaaaaacaat cgcgccaatc tgaccgggca gtttgagggt
    13861 tttgacggga taaggacggg caacgccttt gccgctgtgg taaatcttgg ctttgccgcg
    13921 aaatatgctt tctccaaata cgacgatgcc gcacaccgcc attaaaacag cggaaagcag
    13981 ggcggcggta ttgttgttgt aggacatttc gtattcttgg aaaatggcgg tggtaaaagt
    14041 ggggtagttc aaaatagata ccgcgccaaa ttcgaccagc atatgcaggg caatcagtaa
    14101 cacgctgctg ccgatggcgg gtttgagctg ggggaggatg gcggaaaaaa aggtttgcag
    14161 gcggcttttg cccaaggaca ggctgacttc ttcgtaagac aggctgatgc gtttgagtgc
    14221 cgcctcgacg ggcaggtagg cgagcgggaa cgaggacagg ctcataatca tcactgtccc
    14281 ccaaaagcct tcgacacgga aggtcaggct gatccaggtg aaacagctga caaatgcggg
    14341 gatgcacaaa ggcagggtga ttgccgtctg aaaaaaggtt ttgccgaaga agcggtaacg
    14401 ttggaacaaa agggcgcagg caatgcccaa aacaatggaa atcagggtaa cgcccgccat
    14461 catcgtcaag gtgttggaga gcaaatccca catacgcggg cggaacaaca gttcgacggc
    14521 gcggttgatg ccgacctgcc acgaacgcat agcgacatat aaaaaaggca gggtaagcgg
    14581 tagggcaatc agtaggatga ggccggtaag ccaaatgggt atttttttag gagacatagt
    14641 gttttttatc ggcaaaacgg gcggacagta taaatgtcca cccgtttgac aatccgaaaa
    14701 cggcttattt cataccggct tgctcaagca gccgggtggc gtgttctttt tcggaaacag
    14761 tggtggcgga cacttggggt gcttccaact tggcgatggg ttccaaattg aaagtggata
    14821 ccacgtgcgg attcaaagga tattcggcac ggacggcggt cagggcgcgc tgtccttcct
    14881 tgctggcgag gaaggcgacg aattttttcg cctcatcctt gttttgggag gattttaaca
    14941 cggctgcgcc ggaataggta acgagtgcgc cgggatctct gtggcggacg aaattcaggc
    15001 gggtgtggac attttgtacg cctttttcac gcgcaaaagc gtgccagtag tagttgttga
    15061 tgagggcggc atcgatttcg ccgttttcaa ccgcttgaag ggcgacggag tttttagcgt
    15121 aaggcttgcc gtattctttc agacctttga gccatttcaa tgcggccgct tcgcctttca
    15181 gtttgacgat ggcgacaacc tgttccaaga acgcgccgga agtgggggcg taaccgatgc
    15241 ggtttttcca tttcggcgtg gcgtaattca ggacggattt ttccaaatct ttttcagaca
    15301 gtttgcgggt gtcgtaaacg acgacgcgcg aacgtccgct cagtgccacc cagtcttttt
    15361 tggcggcaac cggcacgccc ttgccgcgtg tttcgttgat ggtggaggcg ggcaggggct
    15421 ctaggaggtt ggctgcggaa agggtggcga gtgccgggat ttgttcggaa tagaatacgt
    15481 cggcggggct tcggctgcct tcttctttga tttgaccggc aagctggtcg cctttggcgc
    15541 tgttgagttt gactttgatg ccggtagccc gggtaaaggc atctgcaacg gcttgtgccg
    15601 cttctttgtg ttggccgttg tacacggtaa tgtctgccag cgcgggggtt gcggcggtca
    15661 gggctgcggc aagcagtgcg tatcggatag atgttttcat atcgattttc tcctaatgaa
    15721 tgagagtgta caccttgtta agacataacg gggtgtagtg tattccttct tctttataaa
    15781 tgcaaataat tattttttaa atttgttatt atccgatccg gttattgttt gttctgactt
    15841 gtattttttc cgtgcatcgc gcccgtaagg cggaagcggc gggcaatgcg tggcggaatg
    15901 tgggtaaagg cggcattttg atttgtcgga atgcttgaga acccctctct ttaaaacagc
    15961 gtctgaacag ggttgccgga atagtattgc catcccggca gatacagttt gtcggggtct
    16021 tgccaatatt gttcatccag actgttcggc agtgaggcgg ttttgttgtc gagatgtttt
    16081 gttatatccc acatttcttt caggttttta ccttccgatt ggaggtggcg gatttctttt
    16141 ctcaatgcgt ctgccgcccg atggatcagc attgcgctgt gtatcgcgcc gatttttttc
    16201 agaacggaac aagtcttttc ggcggcggga aaaccccaat tgcagacaaa ttgcagtatg
    16261 ccgccgttac cgatatcggc ttctgtccgc caaatcaaaa ccagctcctg ttcccgcccg
    16321 tccatgcttt cgagtttgcc gtcatgctgt tcaaaaagtt tgtccaccgc ctgccacatc
    16381 atctgttcga agcggtcggc ttgggtatcc gtatcggtca tcgtgttctt gccttttaaa
    16441 aatgccgtct gaacatttct tcagacggca tcgggggtta agctgacatt tcccgccagc
    16501 gtttgacttg gaaacggact tgttcaggcg cggtaccgcc caagtggttg cgcgcgttta
    16561 agctgccttc gggtgtcagc acgccgtaaa cgtcgtcggc aatcaaatcg ctgaaacctt
    16621 gtaagacttc gagcggcagt tcgctcaaat cgacgccagc ttcatcggcg tggcgcacgg
    16681 cttgggcgac gacttcgtgg gcatcgcgga agggcatacc ttttttaacc agataatccg
    16741 ccaagtcggt ggcggtggca aaaccctgca tcacggcggc gcgcatattg tcgggtttga
    16801 cggttacgcc gcgcatcata tcggcgtaaa tccgcagcgt gtcgatgagc gtgtcggcgg
    16861 tgtcaaacaa aggttctttg tcttcctgat tgtctttgtt gtacgccaag ggctgggatt
    16921 tcatcagggt aatcaggccg ataaggtgtc cgatgacgcg tccggatttg ccgcgcacga
    16981 gttcgggcac gtcgggattt ttcttctgcg gcatgatgga cgaacctgtg cagaaacggt
    17041 cggcgatgtc gataaagccg aaacgcggac tcatccacaa aatcaattct tcggacaggc
    17101 ggctcaggtg aaccataatc agcgaggcgg cggcggtgaa ctcgacggca aaatcgcggt
    17161 cggatacggc atcgagcgag ttttggcaga tttgctcgaa acccagtaat tcggcggtaa
    17221 tttcgcgccg aatcgggtag gtcgtaccgg caagggcggc tgcgccgagc ggcatacggt
    17281 tgacgcggcg gcggcagtcc gccatccgtt cgttatcgcg gccgagcatt tcgacgtagg
    17341 cgagcatatg gtgtccgaag ctgacgggct gggcgacttg caggtgggta aagccaggca
    17401 taacggtttc ggcgttttgt tccgccaaat ccagcaatgc cgtctgaagg ttttgaatca
    17461 ggttttgaat aacggtaatc tggtcgcgca gccacaggcg gatgtcggtg gcgacttggt
    17521 cgttgcggct gcggccggtg tgcaggcgtt tgcccgcgtc gccgattttg tcggtcaggc
    17581 ggcgttcgat gttcatgtgg acatcttcca aatcggacga ccattcgatt ttgccgctgc
    17641 ggatttcttc gaggatttcc gccatgccct gacggatgtc cgccaaatcg ccttcgtcca
    17701 acacgccggt ttctttcaac atttgcgcgt gtgccagcga gccttggatg tcccattcgg
    17761 caagccgtcg gtcgaaaccg atggaggcgg tgtattgttt gacgagttcg gaaacgggtt
    17821 cgttgaaacg tccggaccag gttttgtcgt gcataaggat tccttgatgg ggttattcgg
    17881 tacggtattt ttccaaaagg cggcggaagg gttcgccggt ttcggggtgt ttcaggccgt
    17941 aggcgacggt ggcttcgagg tggcccagtt tgctgccgca gtcgtagcgc gtgccttcaa
    18001 aggggtgcgc caggacaaat tcgtgatcga gcagcttggc gatgccgtct gtaagctgga
    18061 tttcgttgcc cgcgccgcgc ggaagattgg ttaagaggtc gaaaatgcgc ggggtaagga
    18121 tgtagcgtcc gacgacggca aggttggagg gcgcgtcttc gggcttgggt ttttcgacaa
    18181 tgccggtaat gcgttggaac tgtttgagct gttcggtttc gacgatgccg tatgagccgg
    18241 tttgcgatgg ttcgacggtt tctacgccca aaatgctgtt gccgctgcgc ccgtacactt
    18301 cgaccatttg tttgagcgcg cctttggggg catcaatcag gtcgtcggca aggataacgg
    18361 caaagggttc gtctccgatg gcggcgcggg cgcacaagac ggcgtgtccc aagcccagtg
    18421 cttccgcctg acggatgtag aggcaggtaa tgttcggcgg caggatgttg cggacgtgtt
    18481 ccaacaattt gtctttatgg cgcatttcca actcggtttc gagttcgtat gccttgtcga
    18541 aatggtcttc gatgctgcgt ttgttgcgtc cggttacaaa caccatttcc gtgcagccgg
    18601 cttccacggc ttcttctacg gcgtattgga tcagcggctt gtcgacgatg ggcagcattt
    18661 ctttcgggct tgccttggtg gcgggcagga agcgtgttcc gatccctgcg acggggaaga
    18721 cggctttttt tatcggtttc attctttttc ctttgtattg ttttgatgtt taaagggcga
    18781 gtttgtgaat taaatcggcg agtgcctgtg cgcggtggct ttcgcggttt ttgacctccg
    18841 aatccaattc ggcggcggtt ttgccgtgtc cgggcagata aaaatacggg tcgtaaccga
    18901 aaccgttttc accggcggga acgccgttcc attgtccgtg ccatacgcct tcggcaataa
    18961 tcggacgcgg gtcgtcttta tggaggacaa aaaccaatac gcagacgtag caacagcttt
    19021 tgtcggcttt gccggcaagt tcggcggcaa gtttcaggtt gttggcggta tcggatttgg
    19081 gattgctgcc ggcgtatcgg gcggaatgta tgcccggtgc gccgtttagg gcggcggcac
    19141 agatgccgct gtcgtcggca agtgcgggca gcccgctgta tttggcggca tggcgtgctt
    19201 ttgccagcgc attttcgaca aaggtggaat agggttcggg gcattcgggt atgccgaatg
    19261 tggattgcgg caatacggtg atgctgtaag gtttgaataa gttgccgaat tcttcgagct
    19321 tgccggcatt gccgcttgcc aaaacgattt tttccggttt ttcagacata gcggttttcc
    19381 tttgcggcgg attgggcggc gcgtagggat ttgtgccgca ggtagagggc gaggctgccg
    19441 atttgtccga acagtgcgcc gaatgcgaaa aggaaggacg cgacggcgaa ggctttgctg
    19501 ccgacggtca gcagataagc acccaagagg acgagcagca taaatgccag tgtgaagagg
    19561 gcaacagaca acagatagat ttttcggcgg ttcatggcgt tcggtcggaa acggtatgtt
    19621 cggattatag ccgattggga cggtattccc tagagcttgg aaaaatgccg tctgaagcgg
    19681 cgttcagacg gcatggcggg cgttatgcct gtttgttcca acgttcgatg gattctttga
    19741 tgactttttt cgcttcttcc gcatcgcccc aagattcgac tttggtcgta cctgcttttt
    19801 tcaggtcttt gtaatggttg aagtggaact cgatttgttt gatcagctgt tgcggcaaat
    19861 cggacaaagt tttgtaggcg ttgccgttgt tgcggtcgtc ggcaggaacg cagacgattt
    19921 tgtcgtccac ttcgccgtcg tcaacgaatt tcatcacgcc gataacgcgc gcttccaaga
    19981 atacgccggt tgccaaaggt tgttcggtaa cgagcagcac gtccaattcg tcgccgtctt
    20041 cgtccaaagt ttggggaatg aagccgtagt tggtcggttt ggcgaagatg gcgggttcga
    20101 cgcggtcgag ttggaatgcg gcgagtttgc ggttccactc gattttgtgg ttgctgccgg
    20161 cggggatttc gttgacgacg ttgatgatgc cgccgtccac atcgccgggg gtcaggattt
    20221 ggttgaagtc tgccatttgg tttcctttgt ttgggaaagt ttgaagtttg aaagtatagc
    20281 acaaacgtcc ggctgaaaat gcgcccgatg ccgtctgaaa gggtgtacgg gcgcgtgtta
    20341 ccgtttgccc aaaaacctgc ccagttccag aatcgcgcgc ctgttggacg gggaaaacac
    20401 tttttccgcc gcttcttcca agccgaacca gccgtaggag acgtgttctt cgggttgcag
    20461 ggcgatgggc gtatcacgcg ggatttcggc agagaagagg tgttcgcggt tttcaaacac
    20521 gccttttgga tagcggtgcc gccagtggtg gtagatttcg taaaccgtgc tgtcgtgtcg
    20581 gtcttggagc tgctcgtccg ctagcaggat gccggtttct tcccaaactt cgcgctttgc
    20641 cgtttgggcg acggtttcgc ccggttcgag gctgccggtt accgactgcc aaaacccttt
    20701 cggatgcgtg cgttcgatga gcaggatgcc gccgtccccg ctataaagga cgaccagtgc
    20761 ggagacgggg tatttgagcg gttttgccat cggcatcttt cggcgggctg cggtaatgaa
    20821 agggcggatt atagcaaacg ccgcacgtta tggcgtttat ccttttccgt atcctttttt
    20881 ctgcacggat gggacgcgcc ggtgtttgcc ggtaaatttt ccgttgtgtc aaaaagataa
    20941 gggcggttgt gattttaatg cttgccaaag cgtcgggcgg aaactataat ccgaaactta
    21001 tcgagtcgga gtgtggcgca gtctggtagc gcacttgcat ggggtgcaag gggtcgaagg
    21061 ttcgaatcct ttcactccga ccaaaaattc cgaaagccgc tttcaaaagc ggcttttttg
    21121 ccgtccgtat gattatgatg tagagtacgc ggcgacagac attcaaatgc cgtctgaaaa
    21181 ccgttcagat ggcatctctt tatcttagtt tcattccgta ccatcttaag gaacatcaaa
    21241 ttgggcattt cccgcaaaat atcccttatt ctgtccatac tggcagtgtg cctgccgatg
    21301 catgcacacg cctcagattt ggcaaacgat tcttttatcc ggcaggttct cgaccgtcag
    21361 catttcgaac ccgacgggaa ataccaccta ttcggcagca ggggggaact tgccgagcgc
    21421 agcggtcata tcggattggg aaacatacaa agccatcagt tgggcaacct gatgattcaa
    21481 caggcggcca ttaaaggaaa tatcggctac attgtccgct tttccgatca cgggcacgaa
    21541 gtccattccc ccttcgacaa ccatgcctca cattccgatt ctgatgaagc cggtagtccc
    21601 gttgacggat tcagccttta ccgcatccat tgggacggat acgaacacca tcccgccgac
    21661 ggctacgacg ggccacaggg cggcggctat cccgctccca aaggcgcgag ggatatatac
    21721 agctacgaca taaaaggcgt tgcccaaaat atccgcctca acctgaccga caaccgcagc
    21781 actggacaac ggcttgccga ccgtttccac aatgccggcg ctatgctgac gcaaggagta
    21841 ggcgacggat tcaaacgcgc cacccgatac agccccgagc tggacagatc gggcaatgcc
    21901 gccgaagcct tcaacggcac tgcagatatc gtcaaaaaca tcatcggcgc ggcaggagaa
    21961 attgtcggcg caggcgatgc cgtgcagggt ataagcgaaa gctcaaacat tgctgtcatg
    22021 cacggcttgg gtctgctttc caccgaaaac aagatggcgc gcatcaacga tttggcagat
    22081 atggcgcaac tcaaagacta tgccgcagca gccatccgcg attgggcagt ccaaaacccc
    22141 aatgccgcac aaggcataga agccgtcagt aatatcttta cggcagtcat ccccgtcaaa
    22201 gggattggag ctgttcgggg aaaatacggc ttgggcggca tcacggcaca tcctgtcaag
    22261 cggtcgcaga tgggcgcgat cgcattgccg aaagggaaat ccgccgtcag cgacaatttt
    22321 gccgatgcgg catacgccaa atacccgtcc ccttaccatt cccgaaatat ccgttcaaac
    22381 ttggagcagc gttacggcaa agaaaacatc acctcctcaa ccgtgccgcc gtcaaacggc
    22441 aaaaatgtca aactggcaga ccaacgccac ccgaagacag gcgtaccgtt tgacggtaaa
    22501 gggtttccga attttgagaa gcacgtgaaa tatgatacga agctcgatat tcaagaatta
    22561 tcggggggcg gtatacctaa ggctaagcct gtgtttgatg cgaaaccgag atgggaggtt
    22621 gataggaagc ttaataaatt gacaactcgt gagcaggtgg agaaaaatgt tcaggaaata
    22681 aggaacggta atataaacag taactttagc caacatgctc aactagagag ggaaattaaa
    22741 aaattaagaa cttcagaagg aaaggcaaat tctgcatcag cagctttatt gacacttgat
    22801 ttgaagacag ctcaagctgc caatcaagtt gttgaaagtt tgagaagtac aggtaatctt
    22861 ccttctaatt atattactaa atctcaggcg ataagtatgg gatggcgtcc aggaaaagcc
    22921 ttgggtaata caataaaaaa tggacaatta gggggagata tttttgcaaa ttctacaaat
    22981 attttacctg ctaaacaggg taggatatgg tatgaagcgg acattggctt aataaatacc
    23041 atgtcaagat cgaaccaggc tggtactaga ttattatatt ctaacgatgg attgctatat
    23101 ataacaactg atcattatat ctctgcaata caaattggaa cttggaaata ggagtataac
    23161 ttatgcaatt agagattatc ggtagtaaaa tttatacgga acaagatttt cataatcaaa
    23221 tttcaaaaat attttctata caagattatt atgggaacaa tcttgatgct ttatgggatt
    23281 tattaagcac aaatgtagaa cgaccgatta ctttggtatg gaaagatgct atgttctcaa
    23341 aaaatcaatt agaaaatata tttattgaaa tcgtaaatgt tctagaaaga gttaagaaac
    23401 aagatgagga ttatggattc gaagaaaaat ttaattatat tttagagtaa gtaaacccta
    23461 attacattac gtacacaggc ttaaaactcc ccagagccaa ttaagcaagc cgtaacccat
    23521 ataaaactta aactcaacaa gtagcatgtg tgcggaacgt acgcatgcgg ttcttaaagt
    23581 ttgagctaag aggccgtcta aaaacagaaa aaccgtttca gacggtcttt gtttaacgcc
    23641 accgatccag cgggttacaa agcgcagtca atgccgctgc gccttatgcc tccgaagcaa
    23701 taggcagaac atttggacac ggtgaaaaca aaaacgaaac cgcccaagcc gtcggacatt
    23761 tccttttagg agcagctatt gcccgcgtca acggtggtaa ttttgctgcc ggcggctcgg
    23821 cagcagttgc agctgaaaag gcggcggaac atcttgccca acagtataac gacggtaaaa
    23881 ccgcaatcga tccgcaaaca ggcgagttca atgccaacct gctgccggaa catatcaaag
    23941 aggaaatcaa atcaaagagc ggggtgattg catcgctgac gggcgcggcc gtgggcggca
    24001 cgccggtaga tgcgcaaacc ggaggtgcgg tcggacagaa tgcggtggaa aacaacctct
    24061 atctgacatc ggaagcctta aagaaggaca agcagacagc tcgtaaaatt tattccgtca
    24121 taaaagagca agtcaagcat gaatgcagtt ccacaggaag aattaccgaa tgtcgtcaaa
    24181 atataggacg cattatcgaa tttacccaag acaaacgctt tgacagtagg tttaaggact
    24241 taaaaaaaga atccttatat tacctaaata aacatcctga tttagtagcc tcttatttga
    24301 aggctgaata cgaaaagctg gatagggaag acaaaagtat cctgcaccgc tacatctcac
    24361 ccggggctga aatcgtttcg ggcagtttgg gggttgttct ttcaggagta gccggaggcg
    24421 gatcttgtgc cgagactttc ggcttaggct gtgccgccgc tttggttggt gtaacgtctt
    24481 cctacgatca tgtcattact gggacgaaaa acttcggaaa aaaagccagc gagcaacgac
    24541 cgacgattgc ggttcaggcc ttgaagcagt tggggctgtc ggagcaggct gcggaatatg
    24601 ttcagttctc tatagatttg ttcagtgtgg gtaaatcggg gggcggtata cctaaggcta
    24661 agcctgtgtt tgatgcgaaa ccgagatggg aggttgatag gaagcttaat aaattgacaa
    24721 ctcgtgagca ggtggagaaa aatgttcagg aaacgagaag aaggagtcag agtagtcagt
    24781 ttaaagccca tgcgcaacga gaatgggaaa ataaaacagg gttagatttt aatcatttta
    24841 taggtggtga tatcaataag aaaggcacag taacaggagg gcatagtcta acccgtggtg
    24901 atgtacgggt gatacaacaa acctcggcac ctgataaaca tggggtttat caagcgacag
    24961 tggaaattaa aaagcctgat ggaagttggg aggtgaaaac gaaaaaaggt gggaaagtga
    25021 tgaccaagca caccatgttc ccaaaagatt gggatgaggc tagaattagg gctgaagtta
    25081 cttcggcttg ggaaagtaga ataatgctta aggataataa atggcagggt acaagtaaat
    25141 cgggtattaa aatagaagga tttaccgaac ctaatagaac agcatatccc atttatgaat
    25201 agtaatattt atgaaaaatt aggagattaa tgatgaaaag aattaagtgc ttttgtgata
    25261 aatttccatc aggagataca tttagaatgt gtatcattct ggatgactat gataataggg
    25321 ttgattatta tgtaggaata tatgattaca ttacgtctac cttaatgagc gatatttact
    25381 atcgatccac gattgatgag catttcaaga ttatagaatt aatagaaaat aatccaaatg
    25441 aaatttatga tgatggcggt ggtcaacaat tttgcctaga atttcatcat gataaggtca
    25501 ttttttatca caatgaattt gatgaagaag atggttatcc agtattaagc tgttcgctgc
    25561 atacttttaa aactgcttta attgcttgga atgctttttt gcaattgcct aaaagtattc
    25621 attcggtggt ggagactgtg attgaggaat aagcataatt agcttaatga atagaatcag
    25681 cgatatagaa aggtagaatc agatatatcc cacctaaaaa ttactctcct tcagcaccgc
    25741 taccaaaagg acctaataat ggatatagtg ccgggaattt aagcaaaaaa gtcctgactt
    25801 tagtttacat aaacggcaaa ctcaaattcg ggccaagcag tctgccgtct tcggcattga
    25861 aagcacctgt tcccattgtc ggcaaggctg aggctccgcc cggaaaagct gtgcctgtcg
    25921 gcgaagcccg cattccttca aatccaaaag cggtaaaagg aacaaccgtt accctgtcgc
    25981 aggaacaacg cctagccaac ggagagctga taccgaaagg ctctgtggta acgtggtcgg
    26041 acaatgcggt gaaggttgtg cggcctgatg ggaaaaagcg gagatttaat agtcgggatt
    26101 gggaacagaa ggcattgccg aaaccgcaac taccgaaaga ttacagagat gacatcaaca
    26161 taggtggaaa taatcctaga tttaatcagc aacggcatga aaaaatcgaa tcccacaacc
    26221 caaacagaat agaggagata cgccaacgta atgccgtttc ttctgcagaa aggcaggctg
    26281 atgcattaaa aaggatgcaa acgtctggcc gcacccgcct gcctgggcag ccacaaaaag
    26341 gaaaacccgg cgctgctaga gaaatgtcct cttcagacaa tccgaatcaa acagccgagg
    26401 cttttgcacg tcgatattta ggcaggaaac ctacactaat ggaacgagtc gaaggtgaaa
    26461 aattatacgg aggtaaatgt gtgggctgtt ggaaagcgca aatgccggac ggaacctttg
    26521 tggtgtatag gccagcaggt aatgcttcta tgaccaaggg aactactgcg tctgttgata
    26581 ttaataaccc aacattaaat aacttaaata ttaatttaaa aggcaagcca acagagttaa
    26641 aatttaaatt ccctgctaga taaggatgtt ttaatgaatt tagagacagc agaaaatatt
    26701 caatgcgaat ttgagtattt agcattagat ggttattttc caatgcattt tgcatcgcat
    26761 ggtcaaggaa acaaagattg gcaatttgca gttgaattca tatatagatt attaatatgt
    26821 caattagcaa ctcttgaacc tatcaacttt gaaacgaaaa atgatatttt agacttttgc
    26881 cataatttag caaaacaaag tccttttaat aatgataatg aggtgtggta taagggggaa
    26941 attgtattaa caaaaaaagg gatagattta ataaaggaat atattccaga ggcgtttgaa
    27001 gagtggaatg gaaagaaatt tgaattaaac attcctttca ttaaaatatt aaaaaatata
    27061 tttgttaatt atgaggtagc atgggatgag aataatccac tattccccat tatatcttta
    27121 aacctcggca cctgataaac atggggttta tcaagcgaca gtggaaatta aaaagcctga
    27181 tggaagttgg gaaatgaaaa aaggaagggg cggaaaacct atgacaaatc attctatgtt
    27241 cccaaaagat tgggatgagg ctagaattag ggctgaagtt acttcggctt gggagaaaag
    27301 aaaggaatta gaaggtcaaa aatggagagg tacaagtaaa tctggtgttg aaatagaagg
    27361 atttacggaa cctaatcgaa cagcttatcc actttataat agtaaatgaa gtattgatta
    27421 aaaaggtgtt tttaaatgta taaaataaaa tgtttttatg atcagtttag ttctggtgaa
    27481 ttatttaact actgccagtt tttagataat tcttctaatc aaaagataaa tacacgagga
    27541 acggtgtatc aatatat
//
LOCUS       DAWKJW010000009        26222 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.009, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000009 DAWKJW010000000
VERSION     DAWKJW010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26222
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.009"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            607..2055
                     /gene="gnd"
                     /locus_tag="WJJ54_000317"
     CDS             607..2055
                     /gene="gnd"
                     /locus_tag="WJJ54_000317"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HEZ7341229.1"
                     /translation="MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNG
                     AAKGTDIVGAYSLQDLVDKLAKPRKIMMMVRAGSVVDDFIEQLLPLLDEEDIIIDGGN
                     ANYPDTTRRTHYLAEKGILFVGAGVSGGEEGARHGPSIMPGGDKRAWEAVKPIFQAIA
                     AKTPLGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRV
                     FAEWNKTELDSYLIEITAAILGYKDEGGEPLVEKILDTAGQKGTGKWTGINALDLGIP
                     LTLISEAVFARCVSSFKEQRVRMGGLFARQALPVGGDKKQWVGDLRQALLASKIISYA
                     QGFMLIREAGESYGWDLGYGNTALLWREGCIIRSAFLSNIRDAYENNPDLVFLGADPY
                     FKNILENCLPAWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGA
                     HTYERTDKPRGEFFHTNWTGKGGDTASTTYDI"
     gene            2118..3386
                     /gene="waaA"
                     /locus_tag="WJJ54_000318"
     CDS             2118..3386
                     /gene="waaA"
                     /locus_tag="WJJ54_000318"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HEZ7341230.1"
                     /translation="MFQWLYDVLWLLAPIWIRRYLDKLSGSAPAYRAHRDERFGKPYP
                     NPVTGAVWIHAVSVGETRAAQPLIRELRQRFPDAPLLMTQMTPTGRETAQVLFPDAQC
                     RYLPYDKKTWVRQFLREHRPMFGILMETEIWPNLMRECRRAGVPLFLANARLSEKSLN
                     GYLKVRRLIRPAAASLTGCLAQTEADAARLAKLGAASVQVCGNTKYDLMPSEQMKTLA
                     GQFEKRIGGRPVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLVVVPRHPEHFQTAFE
                     TAKRFGFKVQRRSDGLPVEPDTQVWIGDSMGELYAYYLCADVAFVGGSLVDSGCQNII
                     EPLSCSVPTIFGFSTYNFSEACRHALASGAAVQVESADAWRAAVEKALSSEGGGMQMQ
                     ARVDGFIAQHRGAGARIAEAVREAVCGHRG"
     gene            3430..3879
                     /locus_tag="WJJ54_000319"
     CDS             3430..3879
                     /locus_tag="WJJ54_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family copper resistance protein"
                     /protein_id="HEZ7341231.1"
                     /translation="MSIYAVAHIVHLYCAIAFVGGVFFEVLVLSVLHTGRVSRESRRE
                     VEKAMSYRAVRVMPFVVGLLFASGIVMAANRYLPILGEPFATSFGTMLTLKILLAFSV
                     LAHFAIAVVKMARSTLTVGWSKYIHAVVFTHMLLIVFLAKAMFYISW"
     gene            3912..4883
                     /locus_tag="WJJ54_000320"
     CDS             3912..4883
                     /locus_tag="WJJ54_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEZ7341232.1"
                     /translation="MTEYSGIGSPLFYGVFFAAVLVMIALDMFSLKKNGSHKVGIKEA
                     LAWSGLWVAVSCLFAGWLYFELAGNPGYGAAVAKEKVLEFFTGYILEKSLAVDNIFVF
                     LMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVRQFEWILYLFGAFLLYTG
                     IHMMKPEGDEEGDLANSRLLNAVKKVVPVGTEFHGEKFFTVENGKKIATPLFLVLVMI
                     ELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLADVAEHFIFLKYGLA
                     FVLGFIGVKMLVMHWVHIPISVSLSVVFGALGASVLTSLVYTKKTGR"
     gene            4957..5032
                     /locus_tag="WJJ54_000321"
     tRNA            4957..5032
                     /locus_tag="WJJ54_000321"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4990..4992,aa:Lys,seq:ttt)
     gene            5252..6505
                     /gene="murA"
                     /locus_tag="WJJ54_000322"
     CDS             5252..6505
                     /gene="murA"
                     /locus_tag="WJJ54_000322"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEZ7341233.1"
                     /translation="MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNV
                     PMLADVKTTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPT
                     LARFGEAQVSLPGGCAIGSRPVDQHLKGLEAMSAEIVIEHGYVKAKGKLKGTRVAMDV
                     VTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMIVEGV
                     DELHGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAG
                     DDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHV
                     PELNRMGANITTEGNTAFVQGVEQLSGAVVKATDLRASASLVIAGLAARGETVVEQIY
                     HLDRGYENIEKKLGSVGAKIERVSG"
     gene            6586..7764
                     /locus_tag="WJJ54_000323"
     CDS             6586..7764
                     /locus_tag="WJJ54_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEZ7341234.1"
                     /translation="MAFLKLTEQNVQGKTVLIRADMNVPFKDGKISDDTRIRASLASV
                     KYCLDNGASVIVMTHLGRPTEGEFHPEDDVAPVAAHLGGLLGKDVKVLNDWRENKPAL
                     NAGDVVMLQNVRINKGEKKNDLELGKAYASLCDVFVNDAFGTAHRAQASTEAVAQVAP
                     VACAGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGI
                     ANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFAADAEAV
                     VKDIADVAEDEMILDIGPKSAAALADLLKAAGTVVWNGPVGVFEFDQFAGGTKALAEA
                     IAQSKAFSIAGGGDTLAAIAKFGVTEQIGYISTGGGAFLEFLEGKELPAVAALEKRGA
                     "
     gene            complement(7830..8078)
                     /locus_tag="WJJ54_000324"
     CDS             complement(7830..8078)
                     /locus_tag="WJJ54_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEZ7341235.1"
                     /translation="MLTPEQVKALIAGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARL
                     ARHRLIKDGLKAQLESNELHALSISVAATPAEWNAKAQ"
     gene            complement(8170..9087)
                     /gene="ftsX"
                     /locus_tag="WJJ54_000325"
     CDS             complement(8170..9087)
                     /gene="ftsX"
                     /locus_tag="WJJ54_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HEZ7341236.1"
                     /translation="MSIIHYLSLHVESARTALKQLLRQPFGTLLTLIMLAVAMTLPLF
                     MYLGIQSGQSVLGKLNESPQITIYMETAAAQSDSDTVRSLLTRDKRLDNIRFISKEDG
                     LEELQSNLDQNLISMLDGNPLPDVFIVTPDPATTPDQMQAIYRDITKLPMVESANMDT
                     EWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPAS
                     FIRRPFLYQAMWQSILSAAVSLGLCGWLLSAVRPLVDAIFKPYGLNIGWRFFYPGEIA
                     LVFGFVIALGVFGAWLATTQHLLGFKAKK"
     gene            complement(9084..9734)
                     /gene="ftsE"
                     /locus_tag="WJJ54_000326"
     CDS             complement(9084..9734)
                     /gene="ftsE"
                     /locus_tag="WJJ54_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEZ7341237.1"
                     /translation="MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTV
                     LKLISGITKPSRGKVHFNNQDLGTLTDNQIGFMRQHIGIVFQDHKILYDRNVLQNVIL
                     PLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLI
                     ADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA"
     gene            complement(9929..10411)
                     /locus_tag="WJJ54_000327"
     CDS             complement(9929..10411)
                     /locus_tag="WJJ54_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEZ7341238.1"
                     /translation="MKYLNLAAITLAATFAAHTASADELAGWKDNTPQSLQSLKAPVR
                     IVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIW
                     RYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEANEKSLTEAVKLAHSKCR
                     "
     gene            10535..10888
                     /gene="arsC"
                     /locus_tag="WJJ54_000328"
     CDS             10535..10888
                     /gene="arsC"
                     /locus_tag="WJJ54_000328"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271974.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HEZ7341239.1"
                     /translation="MSEIKIFHNPRCSKSRAALSLLEERGIAAEVVKYLDTPPDLSEL
                     KDIFNKLGLASARGMMRVKDDLYKELGLDNPNLDNDALLRAIADHPALLERPIVLANG
                     KAAVGRPLENIEAIL"
     gene            10885..11541
                     /locus_tag="WJJ54_000329"
     CDS             10885..11541
                     /locus_tag="WJJ54_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEZ7341240.1"
                     /translation="MNKRLFCSRNGLRYYLLGGFCLSVFPFLLVFASSVWAVYRTGGQ
                     VLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYM
                     TEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLA
                     RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD
                     "
     gene            11657..13051
                     /locus_tag="WJJ54_000330"
     CDS             11657..13051
                     /locus_tag="WJJ54_000330"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEZ7341241.1"
                     /translation="MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDT
                     DLARSTAESVNIILDGMKWVGLNYDNADNVVYQTRRFDRYKEVIAELLAKGAAYYCYC
                     SKEELEAMREKAEKEGTATYDRRWRPEAGKTLPEIPAGVQPVVRFKTPLDGVTKWADL
                     VKGEISIPNEAIDDLIIARADGTPTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINI
                     LKAIGANLPEYGHLPMILNEQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWA
                     HGDDEFFTMEQFIEWFDLKDVSPSPSRMDLKKLYWINGEHIKITPNGKLAELVKPRLA
                     LRDIHETEKPALEDVLALVKDRAQDLNALADECLYFYKKQVPAEADVAKHWDDEAAAR
                     MLRFAECLEGLEDWNAEAIHDLFKPFCDEEGIKMGKLGMPLRLAVCGTAKTPSVDAVL
                     ALIGKEEVLKRIRA"
     gene            13072..13467
                     /locus_tag="WJJ54_000331"
     CDS             13072..13467
                     /locus_tag="WJJ54_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341242.1"
                     /translation="MPSDVGMRLQTVFKRKLNMKKIFYFLMFVFSTSVWAGDAEDNLL
                     SIQSGYRALLQKQNNLDGKIIGMQSDLEDARRRLQTAQADIARLEAEIPAAMAQKARQ
                     AEELRQIGVRLDHAWNAVYGAGGTKASGN"
     gene            13471..13962
                     /locus_tag="WJJ54_000332"
     CDS             13471..13962
                     /locus_tag="WJJ54_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ7341243.1"
                     /translation="MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIR
                     AYYGRCLKDDELPLAFAAVDDFGTLLGSAAVKRHDMESFPQYEYWLGDVFVLPEYRGK
                     GIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWAVVGRHFHNGEWVTVMRLDM
                     DKV"
     gene            complement(14086..16680)
                     /gene="mutS"
                     /locus_tag="WJJ54_000333"
     CDS             complement(14086..16680)
                     /gene="mutS"
                     /locus_tag="WJJ54_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEZ7341244.1"
                     /translation="MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYEMFFDDAVEAA
                     KLLDITLTTRGQVDGEPVKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKGPV
                     ERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTVDK
                     LDDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRG
                     FGLDGKEHAVAIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEIT
                     QTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAVAALESQYKPL
                     QCRLKSIADIERIAARIAVGNARPRDLAALRDSLFALSEIELSAECSSLLGTLKAVFP
                     ENLSTAEQLRQAILPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
                     RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVL
                     TAQEQALALEKQLFDGVLKNLQTALPQLQKAAKAAAALDVLSTFSALAKERNFVRPEF
                     ADYPVIHIENGRHPVVEQQVRHFTANHTDLDHKHRLMLLTGPNMGGKSTYMRQVALIV
                     LLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSL
                     VLMDEVGRGTSTFDGLALAHAVAEHLLQKNKSFSLFATHYFELTYLPETHAAAVNMHL
                     SALEQGQDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKSAQKHLNELEDQAAANRP
                     QLDIFSTMPSEKGDEPNVDSFVDKAEEKHFEGILAAALEKLDPDSLTPREALSELYRL
                     KDLCKSVS"
     gene            17124..18128
                     /gene="gap"
                     /locus_tag="WJJ54_000334"
     CDS             17124..18128
                     /gene="gap"
                     /locus_tag="WJJ54_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEZ7341245.1"
                     /translation="MSIKVAINGFGRIGRLALRQIEKAHGIEVVAVNDLTPAEMLLHL
                     FKYDSTQGRFQGTAELKDDAIVVNGKEIKVFANPNPEELPWGELGVDVVLECTGFFTN
                     KTKAEAHIRAGARKVVISAPGGNDVKTVVYGVNQDILDGSETVISAASCTTNCLAPMA
                     AVLQKEFGVVEGLMTTIHAYTGDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIG
                     LVIPELNGKLDGSAQRVPVATGSLTELVSVLERPVTKEEINAAMKAAASESYGYNEDQ
                     IVSSDVVGIEYGSLFDATQTRVMTVGGKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI
                     "
     gene            complement(18198..18317)
                     /locus_tag="WJJ54_000335"
                     /pseudo
     CDS             complement(18198..18317)
                     /locus_tag="WJJ54_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(18386..19066)
                     /gene="tsaA"
                     /locus_tag="WJJ54_000336"
     CDS             complement(18386..19066)
                     /gene="tsaA"
                     /locus_tag="WJJ54_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HEZ7341246.1"
                     /translation="MTYTITPIGTARSPYKQKFGIARQPGLVSAAKACIELNPKFTAD
                     SVRGLEDFDYVWISFIFHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSL
                     LKLERIETGKPVRLYCSGADLLDGTPIVDIKPYIPFVESKPDAASGFVSGKPVELEVV
                     WQENIGAENLSANTKNLISQSIAQDPRPAYQNIPERIYVMNIADYEVRFQIEENRATV
                     IDLSPTPL"
     gene            19180..19815
                     /locus_tag="WJJ54_000337"
     CDS             19180..19815
                     /locus_tag="WJJ54_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HEZ7341247.1"
                     /translation="MIVSIDVDAQKTFTPLCPDELPVNEGHLIVEELNAQAALADLRV
                     MTKDAHHMVAKWLVDNPVDMLKPTGLPDADLTWVAHAMVGTRGYELLDGLPSAKEYDY
                     CVWKGVDPELHPYGACFHDIEEKLSTGLIEWLRCQNTDTVIVGGLATDYCVKTTVLQL
                     LKGGNWQVIVNEAACRGIAPDTIETAWQEMRSAGAVILKNAEEIKKHINNQ"
     gene            19853..20821
                     /gene="waaC"
                     /locus_tag="WJJ54_000338"
     CDS             19853..20821
                     /gene="waaC"
                     /locus_tag="WJJ54_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HEZ7341248.1"
                     /translation="MKILLVRLSSMGDLIHTLPAIEDLARQCPGVELHWLCEAGFTDI
                     ARLHPFVKKIHVMKWRQWRKHLFQAETWREMGHLKQTLRQEAFNFVLDSQGLIKSACF
                     AKMAKSPIYGLDKNSAREGLAALAYAKTYAVPKGKNAVWRNRELFAQVFGYAMPETQV
                     FGLTVPEAGRLKNLAQPYYAALHATSRDSKLWPVENWRSLLQKLNEEQQCNIYLPWGN
                     EDEKTRAKQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGLLHLANALEKPVVG
                     IYTDTDPIKTGVQVSPIAKNLGNIGQIPIADLVYQALMDCVAADKG"
     gene            21048..21797
                     /locus_tag="WJJ54_000339"
     CDS             21048..21797
                     /locus_tag="WJJ54_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEZ7341249.1"
                     /translation="MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVE
                     EAVRLKEAGKVSEIVAVSLGEKKCEETLRTALAMGADRAIHVETDAKLEPLAVAKLLK
                     AVADKENPQIFFLGKQAIDDDANQVAQMLAALLNAAQGTFASKVQIEGDEVQIVREID
                     GGEETIALKLPAVISADLRLNEPRFVKLPNIMAAKKKPLEKLTPDDLVADISPRLKTV
                     KFAEPKARQAGVKVASVAELVEKLKNEAKVI"
     gene            21808..22743
                     /locus_tag="WJJ54_000340"
     CDS             21808..22743
                     /locus_tag="WJJ54_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEZ7341250.1"
                     /translation="MSVLIIVEHDNKQLNPTTLHAVTAAAKLGKIDLLVAGSGASAVV
                     EFAKQVAGVEKVLVADAAHYAEGLAEELAPLVVKLAADYCYVAATATTFGKNLLPRVA
                     ALLDVPQISDLTEIVDNTTFVRPIYAGNAFETVQADSEKLVLTFRATVFDAVAAQGGN
                     AEVINVEATPAQNLSRFVNRQLSHSDRPELTQAKVIVSGGRALGSAEKFNEVLTPLAD
                     VLGAAIGASRAAVDAEYAPNDAQVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIV
                     AINKDADAPIFNVADYGLVGDLFEIVPQLTEVLKN"
     gene            22806..23417
                     /locus_tag="WJJ54_000341"
     CDS             22806..23417
                     /locus_tag="WJJ54_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HEZ7341251.1"
                     /translation="MITTYKTITSSTQAEFKDKGSRFIAFAYPIRTLADVKKYLDPLK
                     EEHHKARHWCYAYRLGVDGVQFRANDDGEPSGSAGRPILGQIDSVGITDVLVVVVRYF
                     GGTLLGVPGLIHAYKEATAQALAVAEVVEKNIEKTVWLKCEYPFLNEAIRIAKQYQAD
                     VLERDLQLDCRLTVSLSLVNYEACVAAWKSTRQIEVNTEKPFE"
     gene            complement(23469..23786)
                     /locus_tag="WJJ54_000342"
     CDS             complement(23469..23786)
                     /locus_tag="WJJ54_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HEZ7341252.1"
                     /translation="MQKRIDEIQSKYREWCHLLPQLEEDIRRWKHAVALIRDMDNFYT
                     HEYQACHRAIEDGAEVDLRTEGEYSIMSEDALWNALGEFHQLAWLYLRSSVDALDKYT
                     QED"
     gene            23944..25215
                     /gene="purD"
                     /locus_tag="WJJ54_000343"
     CDS             23944..25215
                     /gene="purD"
                     /locus_tag="WJJ54_000343"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEZ7341253.1"
                     /translation="MKLLVIGNGGREHALAWKLAQSPKVETVFVASGNAGTAIEPKLQ
                     NIDLTAHQDLIEFCRKENIVFTVVGPEAPLAAGVVDDFRAAGLKIFGPTQYAAQLESS
                     KDFAKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLAAGKGVIVAMTLD
                     EAHAAIDDMLLDNKMGNAGARIVIEDFLQGEEASFIVMVDGNNVLPMATSQDHKRLLD
                     GDKGLNTGGMGAYSPAPVVTPVVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQ
                     SGAPHTIEFNCRFGDPETQPIMSRLNSDLSDLVEAAIDGKLDSVTAEWSPQTAVGVVL
                     AAQNYPETPKKGDVISGLDAANQVGKVFHAGTTANEKGDVLTNGGRVLCVVGLGDNVA
                     QAKAKAYGALEKISFDGMQYRKDIADKAINR"
     gene            25249..25851
                     /locus_tag="WJJ54_000344"
     CDS             25249..25851
                     /locus_tag="WJJ54_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEZ7341254.1"
                     /translation="MTDVLQTVFYIMLFPRIIAASAQRKLSVYLKKGGLVAYPTESCY
                     GLGCLPTLAKALGKLAHLKKRPQHKGMIVIGNQFEQLQPLLQMPSENLQDMLRKEWPA
                     PKTFLLSAKSCVLPELRGKQRSKLAVRVPAHVGARRLCQALQTPLVSTSCNRAGKRAC
                     RTEREVRRQFGRDVWIVGGRIGRQKSPSQIIDGETGKRLR"
     gene            25879..>26222
                     /locus_tag="WJJ54_000345"
     CDS             25879..>26222
                     /locus_tag="WJJ54_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341255.1"
                     /translation="MHTQRKNFSDSISLHDCYCTEIKVEGRNVCFNFEDGFVVPDNNP
                     NNQAGKHLKTDFSRVVLTHKNENAEDDYLFDIFEDIVFLGKRLFTVRKFLDFSELLEM
                     VNTQGYFLEFLY"
BASE COUNT         6256 a         5994 c         7427 g         6545 t
ORIGIN      
        1 ctatacgtat ccccatccga aagtttattt atacacaagc aatccaaagt tatctgactg
       61 aaatattgtg agatttaccc gaaaatctca ttttttccac cacttataca caaattcgga
      121 tgcgcactct gccgatatgc agaaataaga cattcgtgcc gacacctgac catttccaca
      181 agttccaaac acactttcct ctcaaacctc cacagtattc cggttcttaa agacatcggc
      241 agccattcgg taaagaaaag cggaatgcca tctgcacaac aggcaaactg tccacaaaaa
      301 ctattcttca tgaaaaacaa tccacaggca tgcacaaaag ggaatccgcc ttaccgacac
      361 cctaaaaaaa agaaatcctg atgattttta aaataaaaaa aagttaccca cagaaaattt
      421 ctcctatcaa tataatcatc gttttattat ttaaatttta tattttattt atacgccttc
      481 agggaaacgg cacgggaaag cgtaaaggca tcttttcaaa aaattaaaaa gttaaggatt
      541 gttaaacaag tgtaaatcag gtagagttgt ggtcgataaa ttaaatctat aacggagctt
      601 cctgcaatga aaggcgatat tggcgtaatc ggtttggcgg ttatggggca aaacctgatt
      661 ttgaatatga acgattgcgg atttaaggtt gtcgcctaca accgaacaat cggtaaggtg
      721 gacgaatttt taaacggcgc ggctaaggga acggatattg tcggcgcgta ttccctgcaa
      781 gacttggtcg ataagctggc aaaaccgaga aaaatcatga tgatggttcg cgcaggttcg
      841 gtcgtcgacg actttatcga acaactgctg cccctgttgg acgaggaaga catcattatc
      901 gacggcggca atgccaatta ccccgacacg acacggcgga cacattacct tgccgaaaaa
      961 gggattttgt ttgtcggggc gggcgtatcc ggcggcgaag aaggcgcgcg gcacggcccg
     1021 tccattatgc cgggcgggga taagcgcgct tgggaagcgg ttaagccgat ttttcaggcg
     1081 attgccgcca aaacgccgct gggcgaaccg tgttgcgact gggtcggcag ggacggcgcg
     1141 ggacattttg tcaaaatggt gcataacggc atcgaatatg gcgatatgca gttgatttgc
     1201 gaagcgtacc agttcatgaa agacggtttg ggactgtcct acgacgaaat gcaccgcgtg
     1261 tttgccgagt ggaacaaaac cgagctggat tcttatctga ttgaaatcac agcggcaatt
     1321 ttgggctata aggacgaagg cggcgaaccg ctggtcgaga aaatcctcga tacggcaggg
     1381 caaaaaggca cgggcaaatg gacgggcatc aatgctttgg atttgggcat tccgttgacg
     1441 ctgatttcag aggcggtgtt cgcccgctgc gtttcatcgt tcaaagaaca gcgcgtccgg
     1501 atgggcggac tgtttgcgcg gcaggcattg ccagtcggcg gcgataaaaa acaatgggtc
     1561 ggcgatttgc gccaagcctt gctcgcctcc aaaattattt cgtatgccca aggcttcatg
     1621 ctgatccgcg aagcgggcga aagctacggc tgggatttgg gctacggcaa cactgcgctg
     1681 ctgtggcgcg aggggtgcat cattcgcagc gcatttttaa gcaatatccg cgatgcctat
     1741 gaaaacaatc ccgatttggt gttcttgggt gcggatccgt atttcaaaaa tattttggaa
     1801 aactgcctgc cggcgtggcg caaggtggtt gccaaggcgg tcgaatgcgg cattcctatg
     1861 ccctgcatgg cttcggcaat tacgttcttg gacggctaca cgaccgaacg tctgcctgcc
     1921 aacctcttgc aggcacagcg cgactacttc ggcgcgcaca cttacgagcg caccgacaaa
     1981 ccgcgcggcg agtttttcca taccaactgg acgggcaagg gcggagatac cgcttcgaca
     2041 acctacgata tttgattccg ttgccgaaat gccgtccgaa ccgttcggac ggcatttgtt
     2101 ttgcaggaaa tagaaagatg ttccaatggc tttatgatgt attgtggctg cttgcgccga
     2161 tatggatacg gcgttatttg gacaaactct ccggaagtgc cccggcatat cgggcgcatc
     2221 gggacgagcg tttcggcaag ccgtatccga atcccgttac cggtgcggtt tggatacacg
     2281 ccgtttcggt tggcgaaacg cgtgccgccc agcccttgat acgcgagttg cggcagcgtt
     2341 ttcccgatgc gccgctgctg atgacgcaga tgaccccgac gggacgggaa accgcgcaag
     2401 ttctgtttcc tgatgcacaa tgccgctatc ttccgtatga caaaaaaacg tgggtacggc
     2461 agtttttgcg cgaacaccga ccgatgttcg gcattttgat ggaaaccgaa atctggccca
     2521 acctgatgag ggaatgccgg cgcgcgggtg tgccgctgtt tttggcgaat gcgcggctgt
     2581 cggaaaaatc gttgaacggt tatctgaagg tccgccgcct gatccgtcct gccgccgctt
     2641 cgctgacggg ttgtctggcg cagacggagg cggatgcggc gcggttggcg aaattgggag
     2701 cggcatccgt gcaggtgtgc ggcaatacca aatatgacct gatgccgtcg gaacagatga
     2761 aaacgctggc ggggcagttt gaaaaacgca tcggaggccg gccggttgcc gtgtgcggca
     2821 gcacgcgcgt ttatcggggt gaagacgagg cggaaaaact gctggcggcg tggcaacaat
     2881 atcgcggcga tgccctgctg gtcgtcgtgc cgcgccatcc cgagcatttt cagacggcat
     2941 ttgaaacggc aaaacgcttc gggtttaagg ttcagcggcg cagcgacggt ttgccggtcg
     3001 aacctgatac gcaggtgtgg ataggcgaca gtatgggcga gctgtatgcg tattacctgt
     3061 gcgccgatgt cgcttttgtc ggcggcagtc tggtcgattc gggctgtcag aacatcatcg
     3121 aaccgctttc ctgcagcgtt ccgacgatat tcggcttttc aacctacaat ttttccgaag
     3181 cctgccggca cgctttggca tcgggggctg cggttcaagt cgaatcggcg gatgcgtggc
     3241 gggcagccgt tgaaaaagcc ttatcgtccg aggggggcgg aatgcagatg caggcgcgcg
     3301 tggacggctt tatcgcacaa catcgcggag cgggcgcgag aatcgccgag gcggtgcggg
     3361 aagcggtatg cggacatcgg gggtgatagt gatacaatcc gtatccgagt tttccggttg
     3421 gagcatcgta tgagtattta tgccgtcgcg cacatcgtcc atctgtattg cgccatcgcc
     3481 tttgtcggcg gcgtgttttt tgaagtgctg gtgttgtccg tcctgcatac gggacgggtg
     3541 tcccgtgagt cgcggcgcga agtggaaaag gcaatgtctt accgcgccgt cagggtgatg
     3601 ccgtttgtgg tcggactgct gttcgccagc ggcatcgtga tggcggcaaa ccgctacctt
     3661 cctatattgg gcgaaccgtt tgccacttcc ttcggtacga tgctgacgct gaaaatcctg
     3721 ttggcgttca gcgtgttggc gcacttcgcc atcgccgtcg tcaaaatggc acgttccaca
     3781 ctgacggtcg gctggtcgaa atacatacac gccgtcgtct ttacccatat gctgctgatt
     3841 gtgtttttgg caaaagcgat gttttatatc agttggtagt acaactacat ttcaaatcag
     3901 gagattgaac catgacagaa tattccggca tcgggtcgcc gttgttttac ggcgtttttt
     3961 ttgcggcagt gctggtcatg attgccttgg atatgttttc gctgaagaaa aacggcagcc
     4021 ataaagtcgg catcaaagaa gccttggcat ggagcggctt gtgggttgcc gtatcctgcc
     4081 tgttcgcggg ctggctgtat ttcgaactcg ccggcaatcc cggctacggc gcggcagtcg
     4141 caaaagaaaa agtattggaa ttctttaccg gctacatttt ggaaaaatcg ttggcagtcg
     4201 ataatatttt cgtgttcctg atgatattcg gctacttcaa agtcgcaccg cagtttcagc
     4261 accgcgtgct gctgtacggc gtattgggcg cattggtatt gcgcactgtc atgattttcg
     4321 tcggcgcggc actggttcgg cagttcgagt ggattctgta tctgttcggc gcgttcctgc
     4381 tctataccgg catacacatg atgaagcccg aaggcgatga ggaaggggat ttggcaaaca
     4441 gcaggctgct gaatgccgtc aagaaagtcg ttccggtcgg cacggaattt cacggcgaga
     4501 aattttttac cgtcgaaaac ggtaaaaaaa tcgccacgcc gctgtttttg gtgctggtca
     4561 tgattgaatt gagcgatgtc gtgtttgccg tggacagcat ccccgccgtc tttgccgtta
     4621 ccaccgatcc gtttatcgtg ctgacttcca atattttcgc tattttgggt ttgcgggcga
     4681 tgtatttcct gctggcggat gtggcggaac actttatctt cctgaaatac ggcttggcat
     4741 tcgtgttggg ttttatcggt gtgaaaatgc tggtaatgca ttgggtgcat atcccgattt
     4801 ccgtttcgct gtcggtcgtg ttcggcgcgt tgggtgcatc ggtattgact tctttggttt
     4861 atacgaaaaa aacaggccga taagcggata taacgcccgt ccgcccgcaa ggggcttgac
     4921 agggtttcgg tcggtctgta aaattccaaa cttatcgggt cgttagctca gccggtagag
     4981 cagcggactt ttaatccgtt ggtcgagcgt tcgaatcgct cacgacccac cagataaagc
     5041 aaaaaagctg agttttcaaa actcggcttt tttttgtttt ccgacaatcc ttgttaggaa
     5101 agcgcggcat ttcgtcaaat tctttggggc ggcttccgta tttttcccga aaatccctta
     5161 taattccgcc tctgcaacct tcatcgggtg atgctttatg cgttgtcccg agtattgaaa
     5221 tattacaagt acccaccagg aaagaacaaa cgtggacaaa ctgaaaatct ccgcaaacgg
     5281 cccgctcaac ggggaaataa cggtctcggg cgcgaaaaac gcggcattgc cgctgatgtg
     5341 cgcgggtttg ctgacatcgg gtacgttgcg cctgaaaaac gtcccgatgc tggcggatgt
     5401 caaaaccacg caaaaactgc ttcaagggat gggcgcgcgc gtcctgaccg acaatatcag
     5461 cgaatttgaa atcaacggcg gtacggtaaa caacacgtgc gcgccgtatg agctggtcag
     5521 aactatgcgc gcttcgattt tggtgctggg gcctactttg gcacgtttcg gcgaggcgca
     5581 agtcagcctg ccgggcggct gcgccatcgg ttcgcgcccc gtcgatcagc atttgaaagg
     5641 cttggaagcg atgagtgcgg aaatcgttat cgaacacggt tacgtcaaag ccaaaggcaa
     5701 actcaaaggt acgcgagtgg cgatggatgt cgttaccgtc ggcggtacgg aaaacctgct
     5761 gatggcggcg acgctggcgg aaggtacgac ggttttggaa aattgcgcca tcgagcctga
     5821 agtggtcgat ttggcggaat gcctggttaa aatgggcgcg aaaatcagcg gcatcggaac
     5881 atcgaccatg atcgtggaag gtgtggacga gctgcacggc tgcgaacaca gcgtcgtccc
     5941 cgaccggatt gaagcgggta cgttcctgtg tgcggtggcg ataaccggcg gcagggtggt
     6001 tttgcggaat gccgccccga aaacgatgga agtggtgttg gacaaactgg tcgaggcagg
     6061 tgcggtgatt gaggcgggcg acgattggat cgccatcgat atgcgtcaac gtccgaaggc
     6121 ggtggacatc cgcacggtcg tccaccccgg cttccccacg gatatgcagg cgcagtttat
     6181 ggcattgaat gccgtggcgg agggaagctg ccgcgtggtg gaaacgattt ttgaaaaccg
     6241 ctttatgcac gtccccgagt tgaaccggat gggggcgaac attacaaccg agggcaatac
     6301 ggcattcgtg cagggtgtgg aacagctttc cggcgcggtc gtcaaggcga cggatttgcg
     6361 cgcttccgcc agcctcgtta tcgccggttt ggcggcgcgc ggcgaaaccg tggtcgaaca
     6421 gatttaccac ttggatcgcg gttatgaaaa tattgaaaaa aaactcggca gtgtcggcgc
     6481 gaaaatcgag cgcgtatccg gctgatcggg ttgcgatgcc gtctgaaggc ttcagacggc
     6541 attaattgtt tctgtatcgc aaacactgat tgaaaaggac tgattatggc atttttaaaa
     6601 ctgaccgaac aaaacgtgca gggcaaaacc gtcctcatcc gcgccgatat gaacgtgccg
     6661 ttcaaagacg gcaaaatcag tgacgacacc cgtatccgcg cctcgctcgc gtccgtcaaa
     6721 tactgcttgg acaacggtgc gtccgttatc gtgatgaccc acctcggtcg cccgaccgaa
     6781 ggcgagttcc atcccgaaga cgacgttgcg cccgttgccg cgcatttggg cggtctgttg
     6841 ggcaaagacg tgaaagtatt gaacgactgg cgcgaaaaca aaccggcttt gaacgcgggc
     6901 gatgtcgtga tgctgcaaaa cgtgcgtatc aacaagggcg agaagaaaaa cgatttggaa
     6961 ctgggtaaag cctacgcttc tttgtgcgac gtgttcgtca atgacgcgtt cggcaccgca
     7021 caccgcgccc aagcctcgac cgaagccgtt gcccaagttg cgcctgttgc ctgcgccggc
     7081 gtattgatgg cgggcgaact cgacgctttg ggcaaagccc tgaaacagcc cgcgcgcccg
     7141 atggtggcga ttgtcgccgg cagcaaagtg tccaccaagc tgaccatcct cgaatcgctg
     7201 gcggacaaag tcgaccaact catcgtcggc ggcggtatcg ccaacacctt cctgttggcg
     7261 gaaggcaaag ccatcggcaa atctttggcg gaacacgatt tggtggaaga atccaaaaaa
     7321 attatggcaa aaatggcggc caaaggcggt tctgtgccgc tgccgaccga tgtcgtcgtt
     7381 gccaaagcct ttgccgccga tgccgaagca gtggtaaaag acattgccga cgttgccgaa
     7441 gacgagatga ttttggacat cggcccgaaa tccgccgccg cgcttgccga tttgcttaaa
     7501 gccgccggta cggtcgtttg gaacgggccg gtcggcgtgt tcgagtttga ccaattcgca
     7561 ggtggcacga aagcccttgc cgaagccatt gcccaaagca aagcgttctc gattgctggc
     7621 ggcggcgaca cgctggcggc gattgccaaa ttcggcgtta ccgaacaaat cggctacatc
     7681 tccaccggcg gcggcgcgtt ccttgagttc ttggaaggca aagagctgcc tgccgtagct
     7741 gctttggaaa aacgcggcgc gtaagcggtt tgatataaaa aaaatgccgt ctgaaaccat
     7801 ttcgtttcag acggcatttt gtatggtggt tattgtgctt tggcattcca ttctgccggt
     7861 gtggcggcta ctgaaatgga aagtgcgtgc agttcgttgc tttccagttg ggctttaagc
     7921 ccgtctttaa ttaggcggtg gcgtgcaagg cgtgctttgc cttcaaattc tgatgaaacg
     7981 atgacggcga aaaaatggtg tccgtcgcct tctacttcga tatgttcgca ttttgccacg
     8041 cctgcaatca gggccttgac ttgttcgggt gtcagcatag tggggagtcc ttattgggaa
     8101 atgcgccatt atactggcaa attgaaatgc cgtctgaaaa cgggttcgga cggcattttt
     8161 gacggtgttt tattttttgg ctttgaagcc gagcaggtgc tgggtggtgg caagccacgc
     8221 gccgaatacg cccaacgcga tgacgaagcc gaacaccagt gcgatttctc ccgggtagaa
     8281 gaaacgccag ccgatattaa gtccgtaggg tttgaagatg gcatcgacca aggggcgcac
     8341 ggcagagagc agccaaccgc aaagccccaa gctgacggcg gcggaaagga tgctctgcca
     8401 catggcttga taaaggaatg ggcggcggat aaacgacgcg ggcgcgccca agagtttggt
     8461 gatttcgatt tcttctttgc ggctgaggat ttgcagtcgg atggtgttgt gcgcgacaag
     8521 gacgaacgcc atccccagcg tcagggaaag aaaccataag attttacgga tgaattcgtt
     8581 gatttggtac agtgtctgta cccattccgt atccatgttg gcggattcga ccataggcag
     8641 tttggtaatg tctcggtaga ttgcctgcat ttggtcggga gtggttgccg ggtcgggggt
     8701 aacgataaag acatccggca gggggttacc gtcaagcatg gaaatcagat tttggtcgag
     8761 attggactgt aattcttcca aaccgtcttc tttgctgata aagcggatgt tgtcgagtcg
     8821 tttgtcgcgc gtcagcaggc tgcgcacggt atcgctgtcg ctttgtgcgg cggcggtttc
     8881 catatagatt gtgatttgcg gcgactcgtt gagtttgcct aaaacgcttt gtccgctttg
     8941 gatgcccaaa tacataaaca gcggcagggt catggcgacg gcgagcatta tgagggtaag
     9001 cagtgtgccg aaaggttggc gcagaagctg tttgagcgcg gtgcgcgcgg attcgacgtg
     9061 cagcgagagg tagtggatga tgctcatgcg agtcgtcctt tcgagaggcg caggatgcgg
     9121 tgtccgtagt ccgccatcag ggtttcgtca tgtgcggcga cgatgacggt tgttcccgct
     9181 tcgtggaagg ttttgaacaa ttccataata tcgagcgcgt aggcgcggtc gaggttggcg
     9241 gagggttcgt cggcaatcag caggccgggc tggtgaacga cggcgcgggc gatgcacagg
     9301 cgttgttgtt caccgccgga gagggttacg ggatcgtcca attctcgtcc tttcaggccg
     9361 actttttcga tggcgatgcg ggcacgctct tcggctttgc gcggcggata gccgataatc
     9421 cgaagcggca ggatgacgtt ttgcaggacg ttgcggtcgt agaggatttt gtggtcttgg
     9481 aacacgatgc cgatatgttg gcgcataaag ccgatttggt tgtcggtcag tgtgccgagg
     9541 tcttggttgt tgaagtggac tttgcccctg cttggtttgg taatgcccga aatcagcttg
     9601 aggacggtgg atttgcctga accggagtgt cctgcgataa aaatcatctc gcctttgttg
     9661 atttggaagc tgacgttttt cagggcttca aaaccgccgg gataggtttt ggaaacttgt
     9721 tcgaaacgga tcataggagg tcctgtaagg aagggcggca tatcgtttcg ggcggttgcg
     9781 tccgcaggga tatgccgtct gaacaatagg taagacagtg ccgattataa agattccgcc
     9841 tgtttttaga tagtggataa gtttggcgga taccgaaggt cgggcgggaa aaatgccgtc
     9901 tgaagcggat tcagacggca tccggcgttt aacggcattt tgaatgggcg agtttgacgg
     9961 cttcggtcag gcttttttcg tttgcctccc ctgtaatggt ctgcctgtat ccgcatttcg
    10021 gtgcttcaac gacggtaaag ggcagtacgc cgacagtgtt tccgtaggtt ttcataaagt
    10081 ttcggctgtt tgccccggtg taacgccaaa tcgggtagga aacaggagtt tgtttgagga
    10141 agttgccgat attgtcggat gtgtcgagcg cgatgccgac catatcgacg ctgccttttt
    10201 tctgcgcttt gtaccatttg gacatggcgg gcatctcttt tcggcacggg ccgcaccagg
    10261 ttgcccaaag gttgacgatg cgtacggggg ctttgagtga ttgcaggctt tgcggggtgt
    10321 tgtctttcca tccggccagt tcgtctgccg aggcggtatg tgcggcaaat gtggcggcaa
    10381 gggtgattgc ggcaagattc aagtatttca tcgttttgtc ctttgtatgt cgattcgggt
    10441 attgtaaacc gtttggtacg gttgtaggcg ggatattgag taaaaccctg tgtaagccga
    10501 taataagggg attgtcgaga agtaaggaaa tgtcatgtct gaaatcaaaa ttttccacaa
    10561 tccgcgttgc agcaaatcgc gtgccgcctt gtccctattg gaagaacgcg gcattgctgc
    10621 cgaagtggtc aaatatttgg atacgccgcc cgacttgtcc gaattgaagg atattttcaa
    10681 caaattgggt ttggcatcgg cgcgcgggat gatgcgcgtg aaagatgatt tgtataagga
    10741 attgggtttg gacaacccca atttggacaa tgacgcgctg ctgcgtgcca tcgccgatca
    10801 tcccgccctg ttggagcgtc cgattgtttt ggcgaacggt aaggcggctg tcggcaggcc
    10861 tctggaaaat atcgaagcga tattgtgaac aaacggctgt tttgcagccg caacggcttg
    10921 cgctattacc tgttgggcgg tttctgtttg agtgtttttc cgtttttgct ggtgtttgcc
    10981 tcatccgttt gggcggttta tcggacgggc gggcaggttt tgccgccgta tgtccgggcg
    11041 gatgccgcgc tggtgttggg tgccgccgca tgggacaaac gcccttcccc tgtttttcgg
    11101 gaacgcatca accacgccat cgcgctttac caaagccgca gggtaggcaa aatcgtgttt
    11161 acgggaggcc ggaccaaaaa aggctatatg accgaagccg aggtcgggcg gcggtacgca
    11221 ctcaaacagg gggttccggc gcgcaacatc ctgtttgaaa acacttcgcg caacacttat
    11281 gaaaacctga acaacatccg tccggttttg cgtgccaacg gtattgccag cgtggtgatt
    11341 gtcagcgatc cctaccattt ggcgcgggcg gcggaaatgg cggaggattt gggtgtccgc
    11401 gtttatatgt ctgccacgcc gaccacgcgg tttgatgcgg gaaataagaa aaaaatcttt
    11461 atgctgcaag agggatatgc gttatccctc taccgtttgg aaaaatgggg cagccgcttt
    11521 ttgggatggc tgtctgattg aagcggtaga aaatgccgtc tgaaacttat ccgcaggcag
    11581 ggttcggacg gcatttttga tgcccaagca cggtaaaacc agtaaaataa acgctttcaa
    11641 agatttcgga gccatcatga ccgtcaaaac ccgtttcgcc cccagcccca ccggctacct
    11701 gcacattggc ggcgttcgca ccgccttgtt ttcgtgggcg tttgcccgcc atcataaagg
    11761 cgaattttta ttgcgcatcg aagacaccga cttggcgcgt tctaccgccg aatccgtcaa
    11821 catcatcctc gacggcatga aatgggtcgg cctgaactac gacaacgccg acaatgtcgt
    11881 gtaccaaacc cgccgtttcg accgctacaa agaagtcatt gccgaactct tggcaaaagg
    11941 cgctgcctac tactgctatt gcagcaaaga agaattggaa gcgatgcgcg agaaagccga
    12001 aaaagaaggc acggcgactt acgaccgccg ctggcggccg gaagcaggca aaaccctgcc
    12061 cgaaattcct gccggcgtgc aacccgtcgt ccgcttcaaa acgcctttgg acggcgtaac
    12121 caagtgggcg gacctggtca aaggcgaaat ttccattccc aacgaagcca tcgacgacct
    12181 gattatcgcc cgcgccgacg gcacgccgac ctacaacttc tgcgtcgtgg tggacgacta
    12241 cgacatgggc gttacccacg ttatccgcgg cgacgaccat gtgaacaaca cgccgaaaca
    12301 aatcaacatc ttgaaagcca tcggcgcgaa cctgcccgaa tacggacacc tgccgatgat
    12361 tctcaacgaa caaggcaaaa aaatctccaa acgcagcggc gataccgtcg ccatcaccga
    12421 tttcggcgcg atgggcatcc tgcccgaagc gatgctcaac tatttggcgc gtttgggctg
    12481 ggcgcacggc gacgacgaat ttttcacgat ggaacaattc atcgaatggt ttgatttgaa
    12541 agacgtttcc ccatctccaa gccgcatgga tttgaaaaaa ctctattgga taaacggcga
    12601 acacatcaaa atcacgccca acggcaaact cgccgaactc gtcaagccgc gtctcgctct
    12661 gcgcgatatc catgaaactg aaaaacctgc attggaagac gtgttggcac tggtcaaaga
    12721 ccgcgcccaa gatttgaacg ccttggcaga cgaatgcctg tatttctaca aaaaacaagt
    12781 ccctgccgaa gccgatgttg ccaaacactg ggatgacgaa gcggcggcac gcatgctgcg
    12841 ctttgccgaa tgcctcgaag ggctggaaga ctggaatgcc gaagccatcc acgacctctt
    12901 caaacctttc tgcgacgaag aaggcatcaa aatgggtaaa ctcggtatgc ccctgcgcct
    12961 tgccgtctgc ggtacggcga aaaccccaag cgtcgatgct gtgttggcat taatcggcaa
    13021 agaagaagtg ttgaaacgca tccgcgctta agttatccac aagcgtgggc gatgccatct
    13081 gatgtcggaa tgcggcttca gacggtattt aaacggaagt tgaacatgaa aaaaatattt
    13141 tattttctga tgtttgtttt ttctacaagc gtatgggcag gggatgcgga agacaatctg
    13201 ctcagcatcc aatccggcta tcgtgcctta ctgcaaaaac aaaacaatct ggacggaaaa
    13261 atcatcggga tgcagtcgga tttggaagat gcgcgccggc gtttgcagac ggctcaggca
    13321 gacatcgccc gtttggaagc ggaaattcct gcagcaatgg cgcaaaaagc ccggcaggct
    13381 gaagagctga ggcaaatcgg agtgcgtttg gaccatgctt ggaatgcggt ttacggcgca
    13441 gggggaacga aggcgtcggg gaattgaccg atgaattccc tctttgtgga caatactgtt
    13501 ttcattacac ggctgaaagc cgggcatatc ggcaggttgg ttcaggcgtt gtttgaggag
    13561 tggcacggat ttgaaccgtg gtcttctgtg gataagattc gtgcctatta cggcagatgt
    13621 ttgaaagatg acgaactgcc gctggctttt gcggctgtgg atgatttcgg aaccctgttg
    13681 ggttcggctg cggtcaagcg gcatgatatg gaaagttttc cacagtatga atattggttg
    13741 ggtgatgtct ttgttttacc tgaatatcgc ggaaaaggca ttggcaggag gctggtcgcc
    13801 cactgcatag gcgcagcgcg ttcgctgggg ataaagttct tgtatcttta tacgcctgat
    13861 gtgcaaatat tttatgaatc attcggctgg gcggttgtcg ggcgacattt ccataacggt
    13921 gaatgggtta cggttatgcg tttggatatg gataaggttt aagccgaatg gacaaatgcc
    13981 gtctgagctg ttcggacggc attttttatg tttggaaact tcctgtcaga taatatttat
    14041 ccacagattt ttccatatgg tttgatgctg ttccgacaac ggaaattaag atacggattt
    14101 gcacaaatct ttcagacggt acagttctga caatgcttcg cgcggggtca ggctgtcggg
    14161 atcgagtttc tccagggctg ctgccaatat accttcaaaa tgtttttcct ctgctttgtc
    14221 cacaaagctg tccacattcg gttcatctcc tttttcagac ggcatggtac tgaaaatatc
    14281 cagttgggga cggtttgcgg cggcttggtc ttccagttcg ttcaaatgct tttgggcgga
    14341 tttcaatgcg cgtacaggca ggccggcgag tttggcgacg gcgatgccgt agctttttcc
    14401 ggcgggcccc ggttggattt ggtgcaggaa cacgatgtcc tgtccctgtt cgagcgcgga
    14461 aaggtgcata ttgacggcgg cggcgtgggt ttcgggcagg taggtcagct cgaaatagtg
    14521 ggtggcaaac aggctgaagg atttgttttt ttgcagcagg tgttcggcaa cggcgtgcgc
    14581 gagggcaaga ccgtcgaaag tggaagtgcc acgtccgact tcgtccatta aaacaaggct
    14641 ttgttcggtg gcgtgatgca ggatgtaggc ggtttcgctc atttcgacca tgaaagtgga
    14701 gcggttggag gcgaggtcgt ccgatgcgcc gatgcgggtg aagatttgat cgatgggccc
    14761 gattgtggcg gcatcggcag gcacaaaaca gccggtgtgt gccaataaaa caatcagcgc
    14821 gacttggcgc atgtaggtgg atttgccgcc catattgggg ccggtgagca gcatgaggcg
    14881 gtgtttgtgg tcaaggtcgg tgtggttggc ggtgaagtgg cgtacctgct gttcgacaac
    14941 gggatggcgg ccgttttcga tgtggataac cggatagtcg gcaaactcgg ggcggacgaa
    15001 gttccgctct tttgccaagg ctgaaaatgt ggacaatacg tccagcgcgg cggcggcttt
    15061 ggcggctttt tgaagctgcg gcaatgccgt ctgaaggttt ttcaatacgc cgtcaaagag
    15121 ttgtttttct aaggcgaggg cttgctcttg agcagtcagc actttgtctt caaaggcttt
    15181 cagttccggc gtgatgaagc gttcggcgtt tttaagggtt tgccggcgtt ggtagtcggc
    15241 aggtgcttgt tcggcttggg ttttggacaa ttcaatgtaa aagccgtgaa cgcggttgaa
    15301 ctcgacttta agtgtggaca aaccggtacg ttcgcgttcc ttggcttcca aatccagcaa
    15361 aaattcgtcg ccatggtttt gaatgcggcg caattcgtcc agttcgggat gaaaaccgtg
    15421 gttgatgaca ttgccgtctt tcagccagac ggaaggttcg ggcaaaatgg cttggcggag
    15481 ctgttcggct gtggataggt tttccgggaa aacggctttg agggttccta agagactgct
    15541 gcactcggcg gacaattcga tttcggacag ggcaaacagg ctgtcgcgca gggcggcgag
    15601 gtcgcgcggg cgggcgttac ccacggcaat acgggcggcg atgcgttcga tgtcggcaat
    15661 gcttttcaga cggcactgga ggggtttgta ttggctttcc agcgcggcaa cggcttcttg
    15721 gcgcgctcgg atgtgggcgc ggttgcgtaa agggtggtgc agccagagag ccaagaggcg
    15781 gctgcccata tgggtagcgc aaaggtcgag cgtggacatc agggtcggcg attttttgcc
    15841 ggagagggtt tgcgtgattt cgagattgcg gcgcgtggcg gcatccatac cgatatattg
    15901 gctgtcggtt tcgagcgaca ggccgtccaa atgttgcggc atcaggtttt gcgtcagacg
    15961 gatatagttc aacagtgcac ctgccgcgcc aatcgcaacg gcgtgttctt tgccgtccaa
    16021 accgaagccg cgcaaatcct ggcagccgaa atattccgtc agcagttttt cccccgcgtc
    16081 ggcggcaaac tgccacgcgt tcaggcgcgt aacacccgat gccgtctgaa gttgcggtgc
    16141 gtttttactg tccggcaaca gaatttccgc cgcctgcagg cgcgccagtt cgtcgtccaa
    16201 tttatccaca gttgtcagct tggttttgaa ttcgccgctt tgcagcgatg cccacgccaa
    16261 accgatgtat tttttgtcgg gggacacggc aacgatgcgg ttggtttcct tgtcttccag
    16321 caatgcggaa tcggtcagcg tgccgggcgt tacgatgcgc acgactttgc gctccaccgg
    16381 tcctttgccc gcgccgactt cgccgacctg ttcgcaaatc gccacgcttt tgcccaactt
    16441 gaccaggcgc gccagatatt gttcggcggc gtgaaacggc acgcctgcca ttttgaccgg
    16501 ctcgccatcc acctgtccgc gcgtggtcag ggtaatatcc aaaagttttg ccgcttctac
    16561 cgcatcgtcg aaaaacatct cgtaaaaatc acccatgcgg taaaacacca gtttgtcggt
    16621 atgttgcgct ttgatgccga ggtattgctg catcattggg gaaacggcgg atttggacat
    16681 ggggctgcct tatcattagg aaaacggtat tgtagcaaaa ggttttgtct tcgacggaat
    16741 gagactgacc gtaagcctgt caataaggtt gtggagacaa gtaggaaaac agcaaagtta
    16801 tccacggaga tattattaag tcaaaaaaca tccacgttta tctgtcctat acggcaagcc
    16861 ttaaactcaa acttatttga cgaaaaggta atgaaaatat tggatatttg caacttatac
    16921 acaagcagat ccgcaatcat caaaatcatc attaaaattt taaattcaaa tattgatggt
    16981 aaaagttttg gaaatctgtg caaacagtaa aattcatcta tatcaaataa gcatcaagta
    17041 gttagatgta atagtggaat gtaactttat ttcagaatac aatacagata ttgaaatttc
    17101 gtttcacagc ttggagtata tacatgagca ttaaagtagc gattaacggt ttcggccgca
    17161 tcggccgcct cgcattgcgt caaattgaaa aagcccacgg catcgaagtc gtcgctgtca
    17221 acgacctgac ccctgccgaa atgctgctgc accttttcaa atacgacagc acgcaaggcc
    17281 gtttccaagg tactgccgaa ttaaaagacg atgccatcgt ggtaaacggc aaagaaatca
    17341 aagttttcgc caatccgaat cccgaagaat tgccttgggg cgagttgggt gtggatgtcg
    17401 tcctcgaatg taccggcttc tttaccaata aaaccaaagc cgaagcacac atcagggccg
    17461 gcgcgcgcaa agtcgtgatt tccgcacccg gcggcaatga tgtgaaaacc gtcgtatatg
    17521 gcgtaaacca agacattttg gacggcagcg aaaccgttat ctccgccgct tcctgcacca
    17581 ccaactgcct tgccccgatg gcggcagtcc tgcaaaaaga gttcggcgta gtcgaaggtc
    17641 tgatgaccac catccacgcc tacaccggcg accaaaacac ccttgacgcg ccgcaccgca
    17701 aaggcgattt gcgccgcgcc cgagccgccg cgctcaacat cgtgcccaac agcaccggtg
    17761 ccgccaaggc catcggtctg gttatccccg aattgaacgg caaactcgac ggctccgccc
    17821 aacgcgtccc tgttgccacc ggctcgctga ccgaattggt ttccgtcctc gaacgccctg
    17881 taaccaaaga agaaatcaac gccgcgatga aagccgccgc cagcgaatct tacggctaca
    17941 acgaagatca aattgtttct tccgacgttg tcggcatcga atacggttcg ctcttcgatg
    18001 cgacccaaac ccgcgtgatg accgtgggcg gtaaacaact ggtgaaaacc gttgcctggt
    18061 acgacaacga aatgtcctac acctgccaac tcgtccgcac tttggaatac ttcgcaggca
    18121 aaatctaagg cttgaacaaa cctgtggata agtaaatgcc gtctgaacac attgcgttca
    18181 gacggcattg tttatctgta tagtggatta aatttaaacc agtacggcgt tacctcgcct
    18241 tgccgtacta tttgtactgt ctgcggcttc gttgccttgt cctgatttaa atttaatccg
    18301 ctataacttg atattgcggc ttatggtgaa caaacaacag ccgtttgttc aactgctatg
    18361 cggcaaaacc ggatttttgc ccgatttaaa gcggggttgg ggaaagatca ataacggttg
    18421 cacggttttc ctcgatttga aatctgactt cgtaatctgc aatattcatc acataaatcc
    18481 gttcgggaat attctgatag gcggggcgcg gatcttgggc aatgctttgg ctgataaggt
    18541 ttttggtgtt tgcagataaa ttttccgcgc cgatgttttc ctgccaaacg acttccaact
    18601 ctacgggttt gccgctgacg aaaccggatg cggcatcggg tttggattcg acaaagggga
    18661 tataaggttt gatgtccaca atcggtgtgc cgtccagcag gtctgcgccg ctgcaataga
    18721 ggcggacggg tttgccggtt tcgatgcgtt cgagtttcag gagcgagagt ccgagatggt
    18781 tggggcggtg ggggctgcgc gtggcgaaca cgcccatttt ttgtttgccg ccgagccgtg
    18841 gcgggcgcac catttgcgcc cagccttcat ccaatacgcc gtgaaaaata aaacttatcc
    18901 acacataatc gaaatcttcc agcccgcgca cgctgtctgc ggtgaatttg ggattcagct
    18961 cgatgcaggc ttttgcggcg gagaccaaac cgggctggcg ggcgatgccg aatttctgtt
    19021 tgtagggcga gcgggcggtg ccgatggggg taatggtata agtcataagg ttgtgggtaa
    19081 gttttttgga aaaaccttat cttatcacaa tcggttttac cgcttttggg cagtaatttg
    19141 ttataataca gggcatttta atcgcgttga aataatgaga tgattgtttc cattgatgtt
    19201 gatgcacaaa aaacgtttac gccactgtgt cctgacgaac tgcccgtgaa cgaggggcat
    19261 ttgattgtcg aggagttgaa tgctcaagcc gctttggcgg atttgcgcgt gatgacgaaa
    19321 gatgcgcatc atatggtagc gaaatggctt gtggataacc ctgttgatat gttgaagccg
    19381 acaggtttgc ctgatgcgga tttgacttgg gtggctcatg cgatggtcgg tacgcgcggc
    19441 tatgaattat tggacggact gccttctgcc aaagaatacg attattgcgt ttggaaaggt
    19501 gttgatcctg aattgcatcc ttacggcgcg tgttttcacg atattgagga aaaactgagc
    19561 acagggctga ttgaatggct gcgttgtcaa aatacggata cggtcattgt cggcggcttg
    19621 gctacggatt attgtgtgaa aacaacggtt ttgcagttgc ttaaaggtgg taattggcag
    19681 gttatcgtca atgaagcggc ttgtcggggt attgcgccgg ataccatcga aacggcatgg
    19741 caggaaatgc gttctgccgg tgctgtcatc ttaaaaaacg ccgaagaaat taaaaaacac
    19801 attaataatc aataagttaa aattgtttca cgtgaaacat acttcttaaa atatgaaaat
    19861 tttgcttgtc cgtttgtcta gtatgggcga tttaattcac actttgcccg caattgagga
    19921 tttggcgcga caatgccctg gtgtagaact ccattggctg tgtgaagctg gatttacaga
    19981 tattgcgcgc ctgcatccgt ttgtgaaaaa aatccatgtg atgaaatggc ggcaatggcg
    20041 caaacatctc tttcaggctg aaacttggcg ggaaatgggt catctgaaac agactttgcg
    20101 gcaggaagca tttaattttg tattggacag tcaaggtctg attaaaagcg cgtgtttcgc
    20161 taaaatggcg aaatccccta tttatggttt ggataaaaat agcgcgcgcg agggactggc
    20221 tgcgctggcg tatgcgaaaa catacgctgt accgaaaggg aaaaatgctg tttggcgcaa
    20281 tcgtgaactg tttgcccaag tatttgggta tgcgatgccg gaaacgcagg tatttggctt
    20341 gactgttcct gaagcaggcc gtctgaaaaa tttagcgcag ccgtattatg cggctttgca
    20401 tgcgaccagc cgggacagta agttatggcc tgtggaaaac tggcgatcgt tgctgcaaaa
    20461 gttgaatgaa gaacagcaat gcaatattta cctgccttgg ggaaatgaag atgaaaaaac
    20521 gcgtgccaaa caaattgcag acggactgcc gtttgctatt gtgtgcgaca aaataaattt
    20581 attgcaggca gcgtatctgc tgaaatacgc ggtcggaatt gtcggcgtgg ataccggttt
    20641 gctgcatttg gcaaatgcct tggaaaaacc tgtggtcggc atttataccg ataccgatcc
    20701 gattaaaaca ggcgttcagg tttcgccaat tgcaaaaaat ttgggcaata tcgggcagat
    20761 tccgatcgca gatttggttt atcaagcgct gatggattgt gttgcagcag ataaaggcta
    20821 aagggtcgtc taaaactgat atggcggcat gatattttcc aatttattag atacaggaat
    20881 gtgtatccgc tagtctgagt aaatgcttta aaaatggtat aatcggcaag cattatccga
    20941 aagatttttg aatgaattcg tttttaagga aaacggattt ggttttatag ggaagaaggt
    21001 ttggtttcgc tggatggtga aagcagcgtt ctttttagga gggttcaatg aaagcactgg
    21061 tcgcagtaaa gcgcgtagtg gactacaacg tcaaagttcg tgtaaaagcc gatggttcgg
    21121 atgtggatat cggcaatgtc aaaatgtcga tgaatccgtt tgacgaaatc gctgtggaag
    21181 aagccgtccg tttgaaagaa gctggaaaag taagcgagat cgtagcggtt tctttgggcg
    21241 aaaagaaatg cgaagaaacg ttgcgtacag ctttggcgat gggtgccgac cgtgcaattc
    21301 atgttgaaac cgatgcgaaa ttggagccgc tggcagttgc caagttgctg aaagccgttg
    21361 cggacaaaga aaatccgcag attttctttt tgggcaaaca ggcgattgat gacgatgcca
    21421 accaagtggc gcaaatgctg gctgctttgc tgaatgcggc gcaaggtacg tttgcgtcca
    21481 aagtacaaat tgaaggcgac gaagtgcaga ttgtgcggga aatcgatggc ggcgaagaaa
    21541 ccatcgcatt gaaactgcct gctgttatca gcgcggattt gcgtttgaac gagccgcgct
    21601 ttgtcaaact ccccaatatt atggcggcaa agaaaaaacc tttggaaaaa ctgactcctg
    21661 acgatttggt tgccgacatt tcacctcgtt tgaaaacggt gaaatttgcc gaacctaagg
    21721 cgcgtcaggc aggcgtaaaa gtagcaagcg ttgccgaatt ggttgaaaaa ttgaaaaacg
    21781 aagccaaagt gatttgagga ggctgaaatg agtgtattga ttattgtcga acacgacaac
    21841 aaacagttga atcctaccac tttgcatgct gttaccgctg ccgctaagct gggtaaaatc
    21901 gatttattgg ttgccggaag cggtgcatct gctgtagtag agttcgcaaa acaagtggcg
    21961 ggtgtggaaa aagttttggt tgcagatgct gcccattatg ccgaaggttt ggctgaagag
    22021 ttggctccgc tggttgttaa attggcagcg gattactgct atgttgcagc aacggcaact
    22081 acattcggta aaaacctttt gcctcgcgta gcagccttat tagacgtacc gcaaatttct
    22141 gatttgaccg aaattgtgga taacacgact tttgtgcgcc ccatttatgc gggtaatgca
    22201 tttgaaaccg tgcaagctga ttcagaaaaa ttggtgctga ccttccgtgc gacggttttt
    22261 gacgcagtgg cggcgcaagg tggtaatgct gaggtaatta atgttgaagc aacccctgcc
    22321 caaaacctga gtcgttttgt taaccgtcag ctttcccatt ccgatcgtcc tgaactgact
    22381 caggcaaaag tgattgtttc cggtggtcgt gcgttgggta gtgcggaaaa attcaatgaa
    22441 gtgctgacac cgttggcgga tgttttaggt gcggcaatcg gtgcatcccg tgcagcagtt
    22501 gatgccgaat atgcgccaaa cgatgctcaa gtcggacaaa ccggtaaagt agttgcgccg
    22561 caactctatt ttgcaatcgg tatttcaggt gcgattcaac acgttgccgg tatgcaagac
    22621 agtaaggtga ttgttgcaat caataaagat gctgatgcgc cgattttcaa tgtagccgat
    22681 tacggattgg ttggcgattt atttgaaatc gttccacaat taacagaagt attgaaaaat
    22741 taatgtttca cgtgaaacgt tcagacgacc ttgttattaa tgaggtcgtc tgaaaacatt
    22801 tcagcatgat tacgacttat aaaaccatta cttcctcgac gcaggctgag tttaaagata
    22861 aaggcagccg ttttattgca tttgcctatc cgattcggac attggctgat gtgaaaaaat
    22921 acctcgatcc gttaaaggaa gagcatcata aagcacgaca ctggtgctat gcctatcgtt
    22981 tgggtgtgga tggtgtgcaa tttcgtgcca acgatgatgg agagccatca ggaagtgctg
    23041 gacgaccaat tttgggacag attgattcgg tgggtattac cgacgttttg gtcgtggtcg
    23101 tccgctattt cggtggtact ttgttaggtg ttccaggtct gatacatgcg tacaaagagg
    23161 cgacggctca agcgttggca gttgcagaag tagttgaaaa gaatattgaa aaaactgttt
    23221 ggctgaaatg tgaatatccg tttttgaatg aagcgatacg cattgctaaa caatatcagg
    23281 cggatgtatt ggagcgggat ttgcagttgg attgccgatt gacggtcagt ttgtcgttgg
    23341 taaattatga ggcctgtgtt gcggcttgga agagtacacg gcagattgaa gtaaatacgg
    23401 aaaagccttt tgaatgaaag gtcgtctgaa atgctttgtg atggtatttc agacgacctc
    23461 ttcgctgact aatcttcttg tgtatatttg tctaaggcat cgacgctgga gcgcaaatat
    23521 aaccaagcca gttgatggaa ttcgcccagc gcgttccata gtgcatcttc actcataatg
    23581 ctgtattcgc cttctgtgcg caaatccacc tccgctccat cttcaatagc ccgatgacaa
    23641 gcctgatatt cgtgggtata aaaattgtcc atatcgcgaa tcaaagcgac ggcatgtttc
    23701 caacggcgga tgtcttcttc caattgcggt agtaaatgac accattcgcg gtatttgctt
    23761 tggatttcat caatacgttt ttgcatggtt gcttgtcctt ttttaattta tgaataagtt
    23821 gaataggttg cagagtggaa tgaagcggtc ttttgtttga ttctactaaa atttcttcag
    23881 atgggataaa agtccctttg tatcgagttt tcgttaaaag tacatatttg tcaaggagat
    23941 ggcatgaaac tgctggttat cggtaatggc ggtcgcgaac acgcgctggc ttggaaattg
    24001 gcgcagtcgc ctaaagtgga aacagtattt gttgcgtctg gtaatgccgg tacagcgatt
    24061 gaacccaagc tgcaaaacat cgacttgact gcgcatcagg atttgattga attctgtcgt
    24121 aaagaaaata ttgtttttac cgtcgtcggc cctgaagcgc ctttggcggc aggtgttgtg
    24181 gatgatttcc gtgctgcagg actaaaaata ttcggtccga cacaatatgc ggcgcagttg
    24241 gaaagttcca aagatttcgc caaagcattt atggcgaaat acaatattcc gaccgcgcaa
    24301 tatcaaacct ttgaaaacgc cgatgccgca catgattacg tcaatcagaa aggtgcgcct
    24361 atcgttatca aagccgatgg tttggcggca ggtaaaggcg tgattgtggc gatgactttg
    24421 gatgaagcgc atgctgcgat tgatgatatg ctgctggaca acaaaatggg caatgccggc
    24481 gcgcgtattg tgattgaaga tttcctgcaa ggcgaagaag cgagttttat cgtcatggtt
    24541 gatggcaata atgtactgcc tatggcaacc agccaagacc acaagcgtct tttagacggc
    24601 gacaaaggtc tgaatacggg cggtatgggt gcgtacagcc ctgcgcctgt ggtaacgcct
    24661 gttgtgtacg aacgcgcgat gaatgaaatt attttgccga ccgtagcagg gatgaaagcg
    24721 gaggggcatg agttcaccgg tttcctgtac gcaggtttga tgattgatca aagcggtgca
    24781 ccccatacga ttgagtttaa ctgccgtttc ggcgatcctg aaacccagcc gattatgagc
    24841 cgactgaaca gcgacttatc ggatttggtt gaagcggcaa tagacggcaa actcgatagc
    24901 gtaaccgcgg aatggagccc gcaaactgcc gtgggcgtgg tactggcggc gcaaaattac
    24961 cccgaaacgc ccaaaaaagg cgatgttatt tccggtctgg atgctgccaa ccaagtaggc
    25021 aaagttttcc atgcaggtac aacggcaaac gagaaaggtg acgtattgac caacggcgga
    25081 cgcgtattgt gtgttgtggg attgggcgat aatgtggcgc aagcgaaagc taaggcatat
    25141 ggcgcgttgg aaaaaatcag tttcgacggg atgcaatacc gtaaagacat tgccgataaa
    25201 gcgattaacc gttaattaga aagaggatga tgccgtctga agccaagtat gactgatgtg
    25261 cttcagacgg tattttatat tatgttattt ccgagaatta tcgcagcatc agcgcaacgt
    25321 aagttaagcg tttatttgaa aaaaggcggt ttggtcgctt atccgaccga atcttgttat
    25381 ggcttggggt gtcttccgac attagccaaa gcactcggta agttggcgca tttgaaaaaa
    25441 agaccgcaac acaagggtat gattgtcatc gggaatcaat ttgagcaatt gcagccttta
    25501 cttcaaatgc cgtctgaaaa tcttcaggat atgcttagaa aagaatggcc cgcccctaaa
    25561 acgttcctat tatccgccaa atcctgtgtc ttacccgagt tacgcgggaa acagcgcagc
    25621 aagttggcgg tcagggttcc cgcccatgta ggtgcgcgcc gcttgtgtca ggctttgcaa
    25681 acgcctttgg tctcgacttc gtgcaaccgc gcaggcaaac gcgcgtgtcg gacggagagg
    25741 gaagtcagaa ggcaattcgg acgcgatgtg tggattgttg gtgggagaat cggcaggcag
    25801 aaatcgccga gtcagattat tgacggggaa acaggtaaac gtttgcgtta gatatgggta
    25861 cttgaatgaa aacttttttt gcatacacaa agaaaaaatt tttcggatag catttctcta
    25921 catgattgtt attgcacaga gataaaggta gaaggacgca acgtctgctt taattttgag
    25981 gacggttttg tcgttccgga caataatccg aacaatcaag cgggcaagca tctgaaaaca
    26041 gatttttccc gtgttgtttt aacccataaa aatgaaaacg ccgaagatga ttatttgttc
    26101 gatatttttg aagacatcgt ttttttaggg aaacgtttgt ttacggtcag aaaatttctt
    26161 gatttttctg aattgcttga gatggtcaat acacaaggtt attttcttga gtttctgtat
    26221 tt
//
LOCUS       DAWKJW010000010        24759 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.010, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000010 DAWKJW010000000
VERSION     DAWKJW010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24759
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.010"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            108..1074
                     /locus_tag="WJJ54_000346"
                     /pseudo
     CDS             108..1074
                     /locus_tag="WJJ54_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703681.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
     gene            complement(1120..3309)
                     /locus_tag="WJJ54_000347"
     CDS             complement(1120..3309)
                     /locus_tag="WJJ54_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEZ7341256.1"
                     /translation="MIYHRIAVNVPLSDGLLTYSHSDPLPPGTRVLVPFRNKTVVGMV
                     WETDIAPDMDTARILSVRTAFSDEPLLPESWRDLLAFTSRYYHYPTGQAVFAALPQGL
                     KETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGGMTMAALKQVNAQA
                     AKLIEDWAEQGWIETTEAAKPILRSYHGQASHAGFVLNAGQRQASDEIQTALGRFQPF
                     LLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVENRFADVPTAVLH
                     SRMAAGRRTQDYLRAMSGQAKLVIGTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRY
                     HARDLAVWRAKQGGCPVVLGSATPSLESWHKAQSGAYRLLQLTERAHTAAQLPQVDIL
                     NVDRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGHTFGCPNCSA
                     KMVLHQRARQLRCHHCDHREPIPFKCPDCGNQDLTAVGHGTQRVEETLRAFLPKAAVV
                     RVDRDSTAHKNDWADLYRRIADNKIDILVGTQMLAKGHDFARLNLVIVLNADGSLYSA
                     DFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYAVFAENELNE
                     RQMFAMPPFGFQTAVRADAPRVADALEFLNAAKETLAPLLPASVSQFGAAPMLMVRLA
                     ERERAQIFLESPSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDPQEA"
     gene            3448..4230
                     /locus_tag="WJJ54_000348"
     CDS             3448..4230
                     /locus_tag="WJJ54_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HEZ7341257.1"
                     /translation="MKTKLIKILTPFTVLPLLACGQTPVSNANAEPAVKAESAGKSVA
                     ASLKARLEKTYSAQDLKVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINID
                     TRKNLTEERAADLNKIDFASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEK
                     MTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVA
                     ETTSLGEQFGFNGTPTLVFPNGRSQSGYSPMPQLEEIIRKNQ"
     gene            complement(4643..6577)
                     /locus_tag="WJJ54_000349"
     CDS             complement(4643..6577)
                     /locus_tag="WJJ54_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HEZ7341258.1"
                     /translation="MSLIECKNINRYFGSGENRVHILKDISLSIEKGDFVAIIGQSGS
                     GKSTLMNILGCLDTAGSGSYRIDGIETAKMQPDELAALRRERFGFIFQRYNLLSSLTA
                     RDNVALPAVYMGAGGKERSARADKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMN
                     GGEIIFADEPTGALDTASGKNVMEIIHKLHEAGHTVIMVTHDPGIAANANRVIEIRDG
                     EIISDTSKNPEIPASNVGRIREKASWSFYYDQFVEAFRMSVQAVLAHKMRSLLTMLGI
                     IIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTLTIDDAK
                     IIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFDENDV
                     KEDAQVVVIDQNVKDKLFADSDPLGKTILFRKRPLTVIGVMKKDENAFGNSDVLMLWS
                     PYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTEDFFMNNSDSIRQ
                     IVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQ
                     QFLIEAVLICVIGGLVGVGLSAAVSLVFNHFVTDFPMDISAASVIGAVACSTGIGIAF
                     GFMPANKAAKLNPIDALAQD"
     gene            complement(6643..7821)
                     /locus_tag="WJJ54_000350"
     CDS             complement(6643..7821)
                     /locus_tag="WJJ54_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacA family efflux pump subunit"
                     /protein_id="HEZ7341259.1"
                     /translation="MAKMMKWAAVAAVVAAAVWGGWSYLKPEPQAAYITETVRRGDIS
                     RTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTEK
                     SKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAEL
                     KALIRQSKISINTAESELGYTRITATMDGTVVAILVEEGQTVNAAQSTPTIVQLANLD
                     MMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSSGGYNSSTD
                     TASNAVYYYARSFVPNPDGKLATGMTTQNTVEIDGVKNVLIIPSLTVKNRGGKAFVRV
                     LGADGKAAEREIRTGMRDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGGPPRR
                     "
     gene            8047..8436
                     /locus_tag="WJJ54_000351"
     CDS             8047..8436
                     /locus_tag="WJJ54_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HEZ7341260.1"
                     /translation="MKNVQKGFTLLELMIAVAILGILTLITYPSYKTYIRRVRLSEVR
                     TTLLHNAQTMERYYRQKGTFKTYDKNKLKQNEYFDITLSEVSPDHFTLKATPNPTTND
                     GETCFVTLNDGGTIAASGTNQSCPGFD"
     gene            8719..9765
                     /gene="adhP"
                     /locus_tag="WJJ54_000352"
     CDS             8719..9765
                     /gene="adhP"
                     /locus_tag="WJJ54_000352"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HEZ7341261.1"
                     /translation="MKMQAVVVNKNVAGDVEIVEREVRPLEYGEALVEVEYCGVCHTD
                     LHVAAGDYGEKPGRVLGHEGIGLVKEVADGVKNLKVGDRVSIAWLFQSCGSCEYCNTG
                     RETLCRSVLNAGYTADGGMATHCIVSADYAVKVPEGLDPAQASSITCAGVTTYKAIKV
                     SGVRPGQWIAIYGAGGLGNLGVQYAKKVFGAHVVAIDINDDKLAFAKETGADLVVNAA
                     KEDAAKVIQEKTGGAHAAVVTAVSAAAFNSAVNCVRAGGRVVAIGLPPESMDLSIPRL
                     VLDGIEVVGSLVGTRKDLEEAFQFGAEGLVVPKVQLRALDEAPAIFQEMREGKITGRM
                     VIDMKKECGCGHHH"
     gene            complement(9930..13415)
                     /gene="smc"
                     /locus_tag="WJJ54_000353"
     CDS             complement(9930..13415)
                     /gene="smc"
                     /locus_tag="WJJ54_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HEZ7341262.1"
                     /translation="MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAV
                     RWVLGEASAKQLRGESMQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVS
                     IKRQLTRQGESTYFINNQTVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEEL
                     RAYIEEAAGVSKYKERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERY
                     KSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETAAQVQALNDEVHALQ
                     TAEQSQQQAVHELGNKRGVLREQIARLEEQIRHRQNLHQRIERDKQAAQAQLQRIHQE
                     QQQIRVQLEENESQVEEKQTELAEWAMQVAEHEERLPELEEAQATLNAAFQTQQDEAN
                     RIRRELALKQQQLAHAEQTVAKHEERKGRLKQENQALNLPDEAETAAAQEAAALLQNR
                     QEHYEEQIIAAEEALHAAREAFQTASNRFQSLKQQHITLQAQQQALSQILSQQQEAAD
                     FWQASDHAAAPQLWQHITAPAEWQHALSVILAERLHARAVPHGFVPPEPLPQGQAAWL
                     SDGLSGGIKKSLPVQALLNQIQAQPPFQTALHHWLDGVLCAPDLSYALAHQNDLGAHQ
                     IWLTPEGHQVDKVSVLLYAKPAQESLITQKAHLDGIASELDNLAPELSADEAAFKQAE
                     AAVRSSEVQHKNLMQQQQQHTRQYSQAQQRAAELLARTNQGQIRREHIARELAQLAEE
                     QTVLQHTSDGLSDDIATLQEAAAELEHQQQTTAHSRQEQQGRLKQAQLALLEANRQYG
                     LAEVAVHKLNQQKQNYQQQIAQLEQQTLDWQERQQELALAYETEFQNDEQHIKLDELT
                     EAVQTLDEEYIAVQEKLAQIQAQGREQYARVQTLQTQLPQLQAATQTALLQQQEALIN
                     AKRYHQNLTERAADLDALEALAKESPKVLNSSIGSLSQQIEALGAVNLAALQELEEAR
                     ERDGYYRSQSEDVQAAITILEEAIAQIDDKTKARFKETFDAVNGKVQTFFPTLFGGGE
                     ATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAPFCL
                     LDEVDAPLDDANTSRFCNLVKEMSAQTQFLYISHNRLTMEMAEQLVGVTMQEKGVSRV
                     VAVDIKQALEMAEAV"
     gene            13417..13668
                     /locus_tag="WJJ54_000354"
     CDS             13417..13668
                     /locus_tag="WJJ54_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009345706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341263.1"
                     /translation="MVGKNKKEAYFNGNPAAPPHILPAKPYRIPHPRCRLKPSDGIFN
                     APEPRFRQRPMLGAAFAVLPRRRARYNPPRHPPDLETCL"
     gene            13665..14387
                     /gene="lpxH"
                     /locus_tag="WJJ54_000355"
     CDS             13665..14387
                     /gene="lpxH"
                     /locus_tag="WJJ54_000355"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEZ7341264.1"
                     /translation="MKPAYFISDLHLSEKHPELTALLLRFLRSSAAGQARAIYILGDL
                     FDFWVGDDEVSELNTSVAREIRKLSDKGVAVFFVRGNRDFLIGQDFCRQAGMTLLPDY
                     SVLDLFGCKTLICHGDTLCTDDKAYQRFRKIVHRKRLQKLFLMLPLKWRTRLAAKIRR
                     VSKMEKQVKPADIMDVNAAFTARQVRAFNAERLIHGHTHREHIHHENGFTRIVLGDWH
                     NDYASILRVDGDGAVFVPLEKY"
     gene            14656..16242
                     /locus_tag="WJJ54_000356"
     CDS             14656..16242
                     /locus_tag="WJJ54_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEZ7341265.1"
                     /translation="MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAVLIYAIKLFYF
                     DDAGMLLNATAASGLVKTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPIAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGT
                     PTWFGFAPLNLSAEDILAIGRQTGVMHFFAGFVIPVIGLGFIVPWSEIRKNLGFVAIA
                     VFSCTIPYVALAMVNEEFPSLVAGAIGLMVSVFAANQGWGLSKDHAKDPNAEKVPFAQ
                     VAKALAPLGMLIGMLVVTRIKQLGIKGILTSKEEWFSFQLPFDLSKITVSDSLTITFG
                     NIFGQDVSASYQTLYVPAWIPFVLTVWICILLYKTKFKDAWTIYSVTFNQTKKPLLAL
                     MGALIMVQLMLVGGDNSMVKIIGKEFAAMAGEHWVYFSPYLGAIGAFFSGSNTVSNLT
                     FGPIQQQIALDTGLSVTLILALQSVGGAMGNMVCLNNIIAVCTVLDVKNSEGAIIKKT
                     VIPMAIYGVIAVVAAMIFFL"
     gene            complement(16410..16613)
                     /locus_tag="WJJ54_000357"
     CDS             complement(16410..16613)
                     /locus_tag="WJJ54_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HEZ7341266.1"
                     /translation="MDNLNLQEISVLPENLPLYCSGPDNEQWNGHPRVFLPLCEGESG
                     SVACPYCGTRYRLDGKMPHHHYA"
     gene            16729..17226
                     /locus_tag="WJJ54_000358"
     CDS             16729..17226
                     /locus_tag="WJJ54_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-mimic protein DMP19"
                     /protein_id="HEZ7341267.1"
                     /translation="MTALTLPEDIRQQEPSALLYTLVSAYLEHTAQTGDESLSCLSDD
                     QHTLTAFCYLDSQVEEGGFVQLIASGYGEYIFRNPLADSLRRWKIKAVPKVLDKAKAL
                     YEQHGKTIETLADGGADIESLRKQFPDFEEWDGAYYEAAEQDLPLLAEHIQSNWETFA
                     HIGQA"
     gene            17308..18501
                     /locus_tag="WJJ54_000359"
     CDS             17308..18501
                     /locus_tag="WJJ54_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HEZ7341268.1"
                     /translation="MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGAT
                     PLVKAVKEAEKRLLESETTKNYLTIDGVADYNAQTQILLFGKDHEIIASRRAKTAQSL
                     GGTGALRIAAEFAKRQLNAQTIWISNPTWPNHNAIAKAVGIQDKPYRYYDAAKHGLDW
                     DGMIEDLSQAQKGDIVLLHGCCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGF
                     GNGLEEDAYGLRVFLKHNTELLIASSYSKNFGMYNERVGAFTLVAEDEETAARAHSQV
                     KTIIRTLYSNPASHGANTIALVLKNDDLKAQWIAELDEMRGRIKAMRQKFVGLLKAKG
                     ASQNFDFIIKQNGMFSFSGLTPEQVDRLKNEFAIYAVRSGRINVAGITDDNIDYLCES
                     IVKVL"
     gene            complement(18905..19840)
                     /gene="hemC"
                     /locus_tag="WJJ54_000360"
     CDS             complement(18905..19840)
                     /gene="hemC"
                     /locus_tag="WJJ54_000360"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEZ7341269.1"
                     /translation="MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTR
                     GDQILDKTLSKVGGKGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERA
                     NPFDAFVSNQYTRLEEMPEGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLD
                     NGEYDAIILAAAGLQRLKLDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKP
                     LNHDTTHACVTAERALARALGGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLQADA
                     QAPAEYADALGRAVAKKLADDGARELIGAVLNTEN"
     gene            19959..20474
                     /gene="ybeY"
                     /locus_tag="WJJ54_000361"
     CDS             19959..20474
                     /gene="ybeY"
                     /locus_tag="WJJ54_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEZ7341270.1"
                     /translation="MKRTKKYPFLTLQRQRFHLNFENASSAAGIPAERDFYRWAWSAL
                     KNEYRRADISLILLDEEEARDYNRDYRGKDYATNVLSFALNEGETLPCQVSEKLYGDL
                     IICPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMRAA
                     GFPNPYQEDGH"
     gene            20476..21300
                     /locus_tag="WJJ54_000362"
     CDS             20476..21300
                     /locus_tag="WJJ54_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEZ7341271.1"
                     /translation="MDGAQPKTNFFERLIARLAREPDSAEDVLNLLRQAHEQEVFDAD
                     TLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKD
                     EVLGILHAKDLLKYMFNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNHMAIVID
                     EYGGTSGLVTFEDIIEQIVGEIEDEFDEDDSADNIHAVSSERWRIHAATEIEDINTFF
                     GTEYSSEEADTIGGLVIQELGHLPVRGEKVIIGSLQFTVARADNRRLHTLMATHVK"
     gene            complement(21443..22822)
                     /gene="nhaC"
                     /locus_tag="WJJ54_000363"
     CDS             complement(21443..22822)
                     /gene="nhaC"
                     /locus_tag="WJJ54_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HEZ7341272.1"
                     /translation="MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAA
                     IVVLILYGLARGLKYNDMQQGMIGALNQGMGAIYLFFFIGLMVSALMMSGAIPTLMYY
                     GFGLISPTYFYFSAFALCSVIGVSIGSSLTTCATVGVAFMGMAAAFHADMAMTAGAIV
                     SGAFFGDKMSPLSDTTGISASIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPSVAA
                     QDLNSVESFRSQLEATGLVHGYSLIPFALLVVLALMRVNAVVAMLFTVIAAVAVTYLH
                     STPDLRQLGAWFYGGYKLEGEAFKDIAKLISRGGLESMFFTQTIVILGMSLGGLLFAL
                     GAIPSLLDAVRSFLTNAGRATFSVAMTSVGVNFLIGEQYLSILLSGETFKPVYDKLGL
                     HSRNLSRTLEDAGTVINPLVPWSVCGVFISHALGVPVWEYLPYAFFCYLSLALTLLFG
                     WTGLTLSKK"
     gene            complement(23113..24336)
                     /locus_tag="WJJ54_000364"
     CDS             complement(23113..24336)
                     /locus_tag="WJJ54_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HEZ7341273.1"
                     /translation="MSAQSQNNHTSPLVVLTTLFFMMGFITCMNDILIPHLKEIFDLS
                     YVQAMLIQFCFFTAYAVMSIPMGAFVGKVGYKNGVIGGFLLTAVGCLLFYPAAGSHSY
                     AVFLGALFILASGVTLLQVAGNPYVTLLAKPGKESATLTLVQAFNALGTTIAPQIGAF
                     LILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIWLPDARKIAAEESAHNHD
                     GKTSVWQYKHLVFGTAGIFCYVGAEVSIGSLMVNVLGYLKGLDHASAAHYLSFYWGGA
                     MVGRFLGSAVMAKFAPNRYLAFNASAAVVLLAVAMATGSGNADVAMWSLLAIGFFNSI
                     MFPTIFSLATKGLGKFTNAASGVLCTAIVGGAVVPVVQGWVADTYTLMSSFVVSVICY
                     LYIVFFAVYGYRADK"
BASE COUNT         5631 a         7113 c         6413 g         5602 t
ORIGIN      
        1 tgcggccgtt tttcgtcggt gcggcggtac ttgccatact cggcgcgttg gtgtttttca
       61 tcagccccgg tgccgtcgtc ctgcaccgcc aaatcttctt agaactcatg ctacctgcgg
      121 catatggtgg tttcctgact gcggctttgt tggactggac ggtttttttc gggtaacctg
      181 aaacctgtcg cgactttgat ggcggcatta ttgctcgccg catccgctat actgcccttt
      241 tcgccgcaaa ctgcctcgtt tttcgtcgcc tcctattggc tggtgttgct gctgttctgc
      301 gcccggttga tttggctggc ccgcaacacg gataacttcg ccctgctgat gctgcttgcc
      361 gcgttcaccg tttttcagac ggcatacgcg gcaaccggcg acttgaacct gttgcgcgcg
      421 caagtgcatt taaatatggc tgcggtgatg tttgtttcca tacgtgtgag tgttttgctg
      481 ggcgcggaag cccttaaaga atgccgtctg aaagaccccg tattcatccc caacatcgtc
      541 tataaaaaca tcgccatcac cttcctgctg ctgcacaccg ccgccgaact ttggctgcct
      601 gcgcaaaccg ccggttttac cgcgcttgcc gtcggtttca tcctgctcgc caagctgcgc
      661 gaactgcacc atcacgaact cctgcgcaaa cactacgtcc gcacttatta cctgctccag
      721 ctttttgccg ccgcaggcta tttgtggaca ggtgcggcga aactgcaaaa cctgcccgcc
      781 tccgcgcccc tgcacctgat taccctcggc gacatgatgg gcggcgtgat gatggtgtgg
      841 ctgaccgccg gactgtggca cagcggcttt accaagctcg actacccgaa actctgccgc
      901 atcgccgtcc tcctgctctt tatggccgcc gtctcgcgca ctttcttgat gaacgtgaac
      961 ccgatattct tcatcaccgt tcctgcgatt ctgaccgccg ccgtgttcgt gctttacctg
     1021 ctgacgttcg taccgatttt tcgggcgaat gcgtttacgg gcgaccctga ataaaaatgc
     1081 cgtctgaaac ggtttcagac ggcatcggat tgccgataat caagcctcct gcggatcgac
     1141 atccaccgac catctaattt tgccgtcgcg gttttgctgc aacacctgca cccacaaact
     1201 cacggcacgg tgcaaatcct gtcgggacgg agattcgagg aaaatttgcg cgcgttcgcg
     1261 ttcggcgagg cgcaccatca gcatgggggc ggcgccaaac tgggaaacgc ttgcgggcaa
     1321 cagcggggcg agggtttctt tggcggcatt gagaaattcc agcgcatcgg caacacgcgg
     1381 cgcgtccgcg cggacggcgg tctgaaaacc gaagggcggc atggcgaaca tttgccgttc
     1441 gttcaattcg ttttcggcaa acacggcata atcctgcgct ttgacggcgg cgaagacggg
     1501 atgttcgggc agttgggtct gtatcaacac cttgccgggt ttgtcggcgc gccccgccct
     1561 gccggacacc tgcatcagct cggcgaacag cctttccggg gcgcgaaagt ccgcgctgta
     1621 caggctgccg tcagcgttca acacgataac gaggttgagc cgcgcgaaat catgcccttt
     1681 ggcgagcatc tgcgtgccga ccaaaatgtc gattttgttg tcggcgatgc ggcggtacaa
     1741 atccgcccag tcgtttttgt gcgccgtgct gtccctgtcg acgcggacaa cggctgcctt
     1801 gggcaggaag gcgcgcaggg tttcttcgac gcgctgcgtg ccgtgtccga cggcggtcag
     1861 gtcttggttg ccgcagtcgg ggcatttgaa cgggatgggt tcgcggtggt cgcagtggtg
     1921 gcagcgcagt tggcgggcgc gttggtgcaa caccattttg gcggagcagt tcgggcagcc
     1981 gaaggtatgg ccgcagtcgc cgcaaaacag cgcgggcgcg aagccgcgac ggttgaggta
     2041 caccagcgac ataccgcccg cttcaaagtt ctgcttcaaa agttgcaagg cttgcggcga
     2101 gaagccgttg tcaagtttca gacggtctac gttgaggatg tccacttgcg gcagttgcgc
     2161 ggcggtatgg gcgcgttcgg tcagttgcaa gaggcggtac gcgccgcttt gcgccttgtg
     2221 ccagctctcc aagcttgggg tcgcgctgcc caacacgacg ggacagccgc cctgcttcgc
     2281 acgccacacc gccaaatcgc gggcgtggta gcgcaattcg ttgtcctgtt tgaacgagcc
     2341 gtcgtgttcc tcatcgacca caatcagccc gacatcatcc atcggcgtga acaccgccag
     2401 ccgcgtgccg atcaccagct tcgcctgccc cgacatcgcg cgcagataat cctgcgttcg
     2461 cctgcctgcc gccatccggc tgtgcaacac ggcggtcggc acgtcggcaa aacggttttc
     2521 cacccgcttc aaaagctgcg gcgtaagatt aatttcgggc aacagaaaca acacctgccg
     2581 cccctgcgcc aacactttcg ccatcgcatc aaaatacacc tcggtcttgc cgctgccggt
     2641 gatgccgtac agcaaaaacg gctgaaatcg tcccaatgcc gtctgaatct catcggaagc
     2701 ctgccgctgg ccggcgttca acacaaatcc ggcgtgcgaa gcctgcccgt ggtacgacct
     2761 taaaatgggc ttcgccgctt ccgtcgtttc gatccagccc tgctccgccc aatcttcgat
     2821 taatttcgcc gcctgcgcgt tcacctgctt caacgccgcc atcgtcatcc cgcccgacag
     2881 cagcgcgtcc cacagagccg cttttttgtt gaaccgcgcc ggcggcggcg tttgtgccct
     2941 gcccgcttcg ttcagcgcgt aaaacaacgg cggctgcggc atttccaccg cgcgcgtttc
     3001 cttcaaacct tgcggcaatg cggcaaatac tgcctgcccg gtcggatagt ggtaataacg
     3061 cgacgtaaac gccaacaaat cacgccagct ttcgggcagc agcggctcgt ccgaaaaggc
     3121 cgtccgaacg ctcaaaatcc gcgccgtatc catatccggc gcaatatccg tttcccacac
     3181 catcccgacc acggttttat tgcggaaagg cacaagcacc cgcgttcccg gaggaagcgg
     3241 atcggaatgg gaataagtca aaaggccgtc tgaaagcggc acgtttacgg cgatgcggtg
     3301 gtagatcata caggcaggca aatcattttt ttgcgtattt taacaggcgg aagctatttt
     3361 cagacgataa attgagccta ggcgcaatgc aggcgcaaca gagatttgat acaattccgc
     3421 ttttccaaca cgcgcaatca tctttatatg aaaaccaagt taatcaaaat cttgaccccc
     3481 tttaccgtcc tcccactgct ggcttgcggg caaacgcccg tttccaatgc caacgccgaa
     3541 cccgccgtca aagccgagtc cgccggcaaa tccgttgccg cctctttgaa agcgcgtttg
     3601 gaaaaaacct attccgccca agatttgaaa gtgttgagcg tcagcgaaac accggtcaaa
     3661 ggcatttacg aagtcgtcgt cagcggcagg cagattatct acaccgatgc cgaaggcggc
     3721 tatatgttcg tcggcgaact catcaacatc gacacgcgca aaaacctgac cgaagaacgc
     3781 gccgccgatt tgaacaaaat cgacttcgcc tccctgcctt tggacaaagc catcaaagaa
     3841 gtgcgcggca acggcaagct gaaagtcgcc gtcttttccg accccgattg tccgttctgc
     3901 aaacgcttgg aacacgagtt tgaaaaaatg accgacgtga cggtttacag ctttatgatg
     3961 cccattgccg gcctgcaccc tgatgccgcg cgcaaggcgc aaatcttatg gtgtcagccc
     4021 gaccgcgcca aagcgtggac ggattggatg cgtaaaggca aattcccggt cggcggcagc
     4081 atctgcgaca atcccgtcgc ggaaaccact tccttgggcg aacaattcgg cttcaacggc
     4141 acgccgaccc tcgtcttccc caacgggcgc agccaaagcg gctacagccc gatgccccaa
     4201 ctggaggaaa tcatccgcaa aaatcaataa tccatccgca aaaaaggctt ggaaaattcc
     4261 aagccttttt tgcgggaaat gccgcctgaa aaccaatccg ccctgaaagt tagcaagcca
     4321 acaaacacat cctaacccat tgaatgattg aaaataataa attgaacaat acgaagcccc
     4381 gccgccgttc ccacgcgggc gggaatctgg aatattgagt taccgtgatt tatccgaaac
     4441 aagcaaagcc gaacgaaccg aattcccgtc tttacgggaa tgacgggact cgagcgttgt
     4501 gtgcaatcat cgaacccccg ccgccgtcat tcccacgcaa gtgggaatct agaacgtaga
     4561 atctaagaaa ccgttttgtc cgataagttt ctgctccaaa atgaccggtc cggcagcttc
     4621 aaacggcatc tttgtgccaa cctcaatcct gcgccaatgc gtctatcgga ttgagtttgg
     4681 ctgctttatt ggcaggcata aagccgaacg cgatgccgat tccggtcgag caggcgaccg
     4741 ccccgataac ggatgccgcc gaaatgtcca tcgggaagtc ggttacaaaa tgattgaaca
     4801 cgaggctgac ggcggcggac aaacccacgc cgaccaaacc gccgatgacg cagattaaca
     4861 ccgcctcaat caaaaactgc tgcaaaatat tgccgcgccg cgcgccgatt gccatccgta
     4921 tgccgatttc tttggtgcgc tcggtaacgg acaccagcat gatgttcatc acgccgatgc
     4981 cgccgactac caatgaaatc agggcgatgg aggaaatcag cagcttcatc gtaccggtgg
     5041 tgctttcgac tatctgcctg atgctgtcgc tgttgttcat gaagaaatct tccgtgccgt
     5101 gccgcgcttt gagcagatcg gtcagccctt tttcggcaac ctgggtattg gcattgtctt
     5161 tgattttgac ggtgatggag ttggtgtggc tctcgcctgt gatttggtgc atcaccgtcg
     5221 tatagggcga ccaaagcatc agcacgtcgg aattgccgaa agcgttttcg tcttttttca
     5281 tcacgccgat gacggtcaag gggcgtttcc tgaacaaaat ggttttaccc aacggatccg
     5341 agtccgcaaa gagtttgtct ttgacatttt ggtcgatgac gacgacctgc gcgtcttctt
     5401 tcacatcgtt ttcgtcaaac agccgccccg tttccagctt cagtccgcgc acgtcgaaat
     5461 attgttcgcc cacgccgtaa agcgaggcgg tcaggtcggt gttgcggtaa gtcagcgtgc
     5521 cgccgctcga agtcatgggc gtggcggaag caacgtagct ttgtttggcg atgatttttg
     5581 cgtcgtctat ggtcagggtt ttaatcctgc cgctgcgcct gtcgccgaag ccgcgccccg
     5641 ggaagatgct gatggtgttc gtccctatcg aactgatgtc ttcaaggatt tttttctgcg
     5701 aaccgttgcc caatgcgacg acggagacaa ccgaagcgat accgatgatg atgccgagca
     5761 tcgtcagaag cgaacgcatt ttgtgcgcca atactgcttg caccgacatt ctgaaggctt
     5821 cgacaaactg gtcgtaataa aacgaccacg aggctttttc ccgaatcctc ccgacattgc
     5881 ttgcggggat ttcgggattt ttcgaggtgt cggaaatgat ttcgccgtcc cgaatttcga
     5941 tgacgcggtt ggcattggcg gcgatgccgg ggtcgtgcgt gaccataatg acggtatgcc
     6001 cggcttcgtg cagcttatgg atgatttcca tcacgttttt gccgctggcg gtatcgagcg
     6061 cgccggtcgg ctcgtcggcg aagatgattt ctccgccgtt catcagggcg cgggcgatgg
     6121 agacgcgctg ctgctgtccg cccgagagtt cgccgggctt gttgccctct ttgcttgcca
     6181 aacccaaatc ctgcaagagt ttgtccgccc gcgcggaacg ctctttgccg cccgcgccca
     6241 tatagacggc tggcagcgcg acgttatccc ttgcggtcag cgagcttaag aggttgtagc
     6301 gttggaagat gaaaccgaag cgttcgcggc gcaatgccgc cagctcgtca ggctgcattt
     6361 tggcagtttc gatgccgtcg attcggtacg aaccggaacc ggcggtatcc aaacagccga
     6421 gtatgttcat cagcgtggac ttgcccgaac cggactgccc gatgatggcg acaaaatcgc
     6481 ccttctctat cgacaggctg atgtctttca aaatatggac gcggttctcg ccgctgccga
     6541 aatagcggtt gatgttttta cattcgatca agctcataat attccgtaaa tcaataacaa
     6601 atgccgtctg aaaccgtttc cgtgttcaga cggcatattc gtttatcggc gcggcgggcc
     6661 gcctagggcg cgttcgccgc tttcctgttg ctcggcggcg gttatttcgg agatgaccac
     6721 tttgtccccc tctttcaacc cgctttttac ttcggtattc atactgtctc tcataccggt
     6781 ccggatttcg cgttccgccg ccttgccgtc cgcacccaac acgcgcacaa acgccttgcc
     6841 gccgcgattt ttcacggtca gcgacggaat aatcagcaca tttttcacgc cgtcgatttc
     6901 aaccgtattc tgcgtcgtca tccccgtggc gagtttgccg tccggattcg gcacaaacga
     6961 acgggcataa tagtagaccg cattggaagc cgtatccgta ctgctgttgt agccgcccga
     7021 cgacatcgtg gtcagcccgg ggtcgacgct gtcgagcttc gccttaatcg gcgtatccgg
     7081 ttcggacaaa atcgtaaacg aaatatcctg ccccgccttc accttggtaa tatcgccctc
     7141 ggcaatctgc attttgttca acatcatatc cagattcgcc aattggacaa tcgtcggcgt
     7201 agactgcgcc gcgttcacag tctgcccctc ttccacgaga atcgccacca ccgtgccgtc
     7261 catcgttgcg gtaatgcgcg tgtagcccaa ttccgactcg gcggtattga tggaaatttt
     7321 gctctgtctg attaaagcct tcagctcggc aacattggct ttggcggcgg caaacgcatc
     7381 ctgcgcgctt tccaaatcct ctttggaagt cgcgttttcc ttccataacg ccgcctgacg
     7441 cttatatttc ttctccgcac tgcccaatgc aatctgtgcc gacaccagct tcgcctgata
     7501 cgtttccaac ttggattttt ccgtattgag cgtattggtc tgcgaggtcg aattgatttc
     7561 cgcaatcaaa tcgccctttt taacctgttg cccgagtttg acataaagtt tcttaatctg
     7621 ccccgatgcc tgtgcgccga ccgataccag gttggacggc gaaatctccc ctgttgcaga
     7681 aaccgtccgg ctgatgtcgc cgcgcctgac cgtttccgta atataagcag cctgcggctc
     7741 gggcttcaga taagaccatc cgccccaaac cgctgccgcc acgaccgccg caacagccgc
     7801 ccatttcatc atttttgcca tgttttcaat tctctgtatg cgtcaatccc ataaatcgga
     7861 agcggattct accgcaagtc cctgccccat ccaaggcggc aaactgccga caataaaaat
     7921 aaccatttgt tttaaatggc ttatacaatc tgctttcccg aaaatttcaa tccgtttaca
     7981 tattccgcca tttccgatac ggcgttataa tgccgtcgac cgacaaacaa atggaaacac
     8041 attgctatga aaaacgttca aaaaggcttt acgctgctcg agctgatgat tgccgtcgcc
     8101 atcctcggca tcctgacgct catcacctac ccttcctata aaacctacat ccggcgcgtc
     8161 cgcctgtcgg aagtcaggac gaccctgctg cacaacgcgc agaccatgga acgttactac
     8221 cgccaaaaag ggacgtttaa aacctacgac aaaaacaaac tgaaacaaaa cgaatatttc
     8281 gatatcactt taagcgaagt cagccccgac cattttaccc ttaaggcaac gcccaatccc
     8341 accaccaacg acggcgaaac ctgcttcgtt acgctcaacg acggcggtac cattgccgct
     8401 tccggtacaa accaatcctg ccccggcttc gactaatcct ccgccgaagc ccgcaaaccc
     8461 gtaaagatgc cgtccggaca cagcttcaga cggtatcttt acgggtttgc cgtccggttt
     8521 ttcaaacttg aaacctgccg cccctcatcc ggcaaccgcc ccgatgccgc gcctttccaa
     8581 gctgttatag tataacatat aacccatatt tttcaacaac ataccacttg acctgtgaga
     8641 tgcggaagcg tatgcttacc cttatatcgg acaacattcc gtttacaggt ttttttgccg
     8701 taactaagga gcgcaatcat gaaaatgcag gcagttgttg tgaataaaaa tgtagcgggc
     8761 gatgtggaaa tagtcgaacg cgaggttcgc ccgttggaat acggcgaggc gttggtcgaa
     8821 gtcgaatatt gcggcgtgtg ccacaccgac ctgcacgttg cggcaggcga ctacggcgaa
     8881 aaaccgggcc gcgtgctggg acacgagggc atcggtttgg ttaaagaagt tgccgacggt
     8941 gtgaaaaatc tgaaagtcgg cgaccgcgtc agcatcgcct ggctgttcca aagctgcggc
     9001 tcgtgcgaat actgcaatac cggccgcgaa accctgtgcc gctctgtatt gaacgcgggc
     9061 tacaccgccg acggcggtat ggcgacccac tgcatcgtga gtgccgatta cgcggtcaaa
     9121 gtccctgaag gtttggatcc tgcgcaagct tcgagcatta cttgtgccgg cgtgaccact
     9181 tataaagcca ttaaagtttc cggcgttcgt ccgggacagt ggattgccat ctacggcgcg
     9241 ggcggtttgg gcaacttggg ggtccaatac gcgaaaaaag tattcggcgc gcacgttgtc
     9301 gccatcgaca tcaacgacga caaactggcg tttgccaaag aaaccggcgc ggatttggtt
     9361 gtcaacgccg ccaaagaaga cgctgccaaa gtgattcagg aaaaaaccgg cggcgcacac
     9421 gctgcggtcg taaccgccgt atctgctgcc gcattcaact ctgccgtgaa ttgcgtccgc
     9481 gcaggcggac gtgtggttgc catcgggctg ccgccggaat cgatggattt gtccatcccg
     9541 cgtttggttt tggacggcat cgaagtggtc ggctctttgg tcggcacgcg caaagatttg
     9601 gaagaagcct tccaattcgg cgcggaaggt ttggttgtgc cgaaagtcca actgcgtgct
     9661 ttggatgaag cacccgccat tttccaagaa atgcgcgaag gcaaaatcac cggtcgtatg
     9721 gtaatcgata tgaaaaaaga atgcggctgc ggccaccacc actgatttga cgtggcgata
     9781 cacatcgaaa tgccgtctga acgctgttca gacggcattt tttatggatt tggatttgat
     9841 tttaatctgt tctgtttgaa ataccgtctg aaaacccgta tcgcaacacg tcattaagaa
     9901 cggcaagatt cagccgttct gcaacccgtt caaacggctt ccgccatttc caacgcctgc
     9961 ttgatgtcca cggcgacgac gcgcgatacg cctttttcct gcatggttac gccgaccagc
    10021 tgctctgcca tttccatggt caggcggttg tgggagatgt agagaaactg ggtttgcgcc
    10081 gacatttctt tgaccaggtt gcagaaacgc gaagtgttgg catcgtctag cggagcgtcg
    10141 acttcgtcca aaagacagaa cggagcgggg ttgaggctga acagggcgaa cacgaggctc
    10201 atcgcggtaa gggctttttc gccgccggaa aggaggtgga tggtgctatt tttcttgccg
    10261 ggcgggcgcg ccatgataga cacgccggcg gtcagtaggt cgtcgcctat cattttgagg
    10321 gtggcttcgc cgccgccgaa cagggtcggg aagaaggttt ggactttgcc gttgacggcg
    10381 tcgaaggttt ctttgaaacg cgctttggtt ttgtcgtcga tttgggcgat ggcttcttcc
    10441 aaaatggtga tggctgcctg cacgtcttcg ctttggctgc ggtagtagcc gtcgcgttcg
    10501 cgcgcttctt cgagttcttg cagggcggcg aggttgaccg cgccgagggc ttcgatttgt
    10561 tgcgagaggc tgccgatgct gctgttcaat actttcggcg attctttcgc caacgcttcg
    10621 agcgcatcca aatcggcggc gcgttcggtc aggttttgat ggtagcgttt ggcgttgatc
    10681 agggcttcct gttgttgcaa cagggcggtt tgggtggctg cctgaagctg tggcaactgg
    10741 gtttgcaggg tttgtacgcg ggcgtattgt tccctgccct gcgcctgaat ctgcgcgagt
    10801 ttttcctgca cggcgatgta ttcttcatcc aaagtttgta cggcttcggt caactcgtcg
    10861 agttttatgt gctgctcgtc gttttggaac tcggtttcat aggctagggc aagctcttgc
    10921 tggcgttcct gccagtcgag ggtttgctgt tcgagctggg caatttgctg ttggtagttt
    10981 tgtttttgct ggttgagctt gtgaacggcg acttcggcaa gcccgtattg gcggttggct
    11041 tccaacaggg caagctgcgc ctgtttcaga cgaccttgct gctcttggcg gctgtgcgcg
    11101 gtggtttgct gttggtgttc gagttcggcg gcggcttcct gcaaagtggc gatgtcgtct
    11161 gaaagcccgt cggacgtgtg ttgcaacacg gtttgctctt ctgccaactg cgccagttca
    11221 cgggcgatgt gttcgcggcg gatttgccct tggttggtgc gcgccagaag ttcggcggcg
    11281 cgttgctgcg cctgactgta ttggcgcgtg tgctgctgtt gttgctgcat caggtttttg
    11341 tgctgcactt cggacgagcg cacggcggct tccgcctgtt tgaacgcggc ttcgtcggcg
    11401 gagagttcgg gggctaggtt gtccagttcg gatgcgatgc cgtcgaggtg cgctttttgg
    11461 gtaatcaggc tttcctgcgc gggcttggca tagagcagga cgctgacttt atcgacctga
    11521 tgaccttcgg gcgtgagcca gatttgatgt gcacccaaat cgttttgatg cgcgagggcg
    11581 tagctcaaat cgggcgcgca caatacgccg tcgagccagt ggtgcaatgc cgtctgaaac
    11641 ggcggctgcg cttggatttg gttcagcaat gcctgtacgg gcagggattt tttgatgccg
    11701 ccggagaggc cgtctgaaag ccatgccgcc tgcccctgcg gcaaaggttc gggcggtacg
    11761 aagccgtgcg gcacggcgcg ggcgtgcagg cgttcggcaa ggatgacgga caaggcgtgc
    11821 tgccactcgg cgggcgcggt gatgtgttgc cacagttgcg gcgcggcggc gtggtcgctt
    11881 gcctgccaga agtcggcggc ttcctgctgt tgcgacagga tttgcgacaa cgcctgctgc
    11941 tgcgcctgca aggtgatgtg ttgctgcttc aggctttgga agcggtttga ggccgtctga
    12001 aacgcctcgc gggcggcgtg taaggcttct tcggcggcga tgatttgttc ttcgtaatgc
    12061 tcttgccggt tttgcaacag ggcggcggct tcctgcgcgg cggcggtttc ggcttcgtcg
    12121 ggcaggttca gggcttggtt ttcctgtttc agacggcctt tgcgctcttc gtgcttggca
    12181 acggtttgtt cggcatgggc aagctgctgc tgcttcaacg ccagttctcg gcggatgcgg
    12241 tttgcctcgt cctgctgggt ttggaaggcg gcattgagcg tggcttgggc ctcttccaat
    12301 tcgggcagac gctcttcgtg ttcggcaacc tgcatcgccc attccgccaa ttcggtttgc
    12361 ttttcttcga cctgcgactc gttttcttcc agctgcacgc ggatttgctg ctgctcctga
    12421 tggatgcgct gcaactgcgc ctgcgccgcc tgcttgtcgc gttcaatgcg ttggtgcagg
    12481 ttttgccggt ggcggatttg ctcttccaaa cgggctatct gctcgcgcaa cacgccgcgt
    12541 ttgttgccca attcgtgcac cgcctgctgc tgcgactgtt cggcggtctg caaggcatgt
    12601 acttcgtcgt ttaacgcctg aacctgcgcg gcggtttcgt cctgctgcgc ctgcaaagac
    12661 tgatgctgcg cggtcgcttt gtcggcggcg gcaagcgatt gctgccattg ggcgtaatcg
    12721 agcaaatcct gttgttggtt caactgcgcg gtcagggatt tgtagcgttc ggcggtttcc
    12781 gcctgtttct ccagcttttc cacctgacgc gccaactcgt tctgcaaatc gcccaaacgc
    12841 tgcaaatgct cgcgcgtgtc tttcagacgg ccttccgtct ccttgcggcg ttccttatat
    12901 ttggacacac ctgccgcctc ctcgatatag gcgcgcaatt cctccggccg cgcttcgatg
    12961 atgcgcgaaa tcatcccctg ctcgataacg gcataaccgc gcgcgcccac gcccgtaccc
    13021 aaaaataaat cggtaatgtc gcggcggcgc acggtctgat tgttgatgaa ataagtcgat
    13081 tcgccctgac gcgtcagctg ccgcttgatg ctcacctcgg catactgccc ccacgccccc
    13141 tgcaaactgt ggtcgctgtt gtcaaatacc agctccaccg aagccctcgg cgcaggacgg
    13201 cgcgtcgccg caccgttaaa aatcacgtcc tgcatactct cgccgcgaag ctgcttcgcc
    13261 gaagcctcac ccaacaccca gcgcaccgcg tcaatcacat tcgacttgcc gcagccgttc
    13321 ggcccgataa ccgcgacaag ctgccccggc acatgaatcg tggtcgggtc ggtaaaagat
    13381 ttgaagccgg agagtttgat atgggtcagg cgcataatgg tcggaaaaaa taaaaaagaa
    13441 gcgtatttta acggaaatcc cgccgcacca ccccatatct tgccggcaaa accttaccgc
    13501 atcccgcacc ctcgatgccg tctgaagcct tcagacggca tttttaacgc gcccgaaccc
    13561 cgattccgcc aacgcccgat gcttggcgcg gcatttgccg tattgccccg ccgccgggcg
    13621 cgttataatc cgccacgaca tccgcccgat ttggaaacct gcctatgaaa cccgcctatt
    13681 tcatctccga cctgcatttg agcgaaaagc accccgaact gaccgcgctg ctgctgcgtt
    13741 ttttacgttc ttccgccgcc gggcaggcgc gggcgattta tattttgggc gatttgtttg
    13801 atttttgggt gggcgatgac gaagtttccg agttgaatac ttcggttgcg cgggaaatca
    13861 ggaaattgtc cgacaaaggc gttgccgtgt tcttcgtcag gggcaaccgc gacttcctga
    13921 tcggtcagga tttttgccgg caggcgggta tgacgctgct gccggattac tcggttttgg
    13981 acttgttcgg ctgcaaaacc ctcatctgcc acggagacac attatgcacc gacgacaagg
    14041 cataccaacg tttccgcaaa atcgtgcatc ggaagcggct gcaaaaactg ttcctgatgc
    14101 tgcccctaaa gtggcgcacg cgccttgccg ccaaaatcag gcgtgtcagc aaaatggaaa
    14161 aacaggtcaa gcccgccgat attatggatg tcaatgccgc ctttaccgcg cggcaggttc
    14221 gcgcctttaa cgcggaaagg ctgatacacg gacacaccca ccgcgagcat atccatcacg
    14281 aaaacggctt tacccgcatc gttttgggcg actggcataa cgactatgct tcaatcctcc
    14341 gcgtagacgg ggacggcgcg gtattcgtgc cgctggaaaa atactgaaaa tgccgtctga
    14401 agcctttcgg gcggcttttt ttacacgccc ctttcccaca ctccctccgc cgcatcatca
    14461 ccatccttaa cccgcattaa tagccattat cgataaaatg cttgaccgat tacataagat
    14521 tacgtaaagt gtgcaaacgc ataacaattg gtcttaccaa tttatctttt aaccaaaata
    14581 tcgggtgtac gggatttgaa cgtctttcca aacctcgacg cgccttatga tgcaaatgcc
    14641 taaaaaggat tcgttatggc acttttcctc agcatattcc ccatcgtcct gctgatttgg
    14701 ctgatggtga aaaaaaacag tatgccctcc tacgtcgcgc tgccgattac cgcagtgctg
    14761 atttacgcca tcaaactttt ctacttcgac gatgcgggca tgctgctcaa cgccaccgcc
    14821 gcttccggcc tcgtcaaaac gctcacgccg attaccgtga ttttcggcgc gattatgttc
    14881 aaccgtatga tggaaaccac gggctgcatc gatgtcatcc gcaaatggct ggcgaccatc
    14941 agccccaacc ccatagcgca actgatgatt atcggctggg cttttgcctt tatgattgaa
    15001 ggcgcatccg gcttcggcac gcctgccgcg attgccgcgc cgattctgat gagcttgggc
    15061 ttcaacccgt tgaaagtggc gattttcact ttggtgatga actccgtccc cgtctctttc
    15121 ggcgcggtcg gtacgccgac ctggttcggt ttcgcaccgc tgaacctgag tgccgaagac
    15181 atcctcgcca tcggcaggca gaccggcgta atgcacttct tcgcaggttt cgtcatcccc
    15241 gtcatcggct tgggcttcat cgtaccttgg tctgaaatcc gcaaaaactt gggcttcgtc
    15301 gccattgccg tcttctcctg caccattcct tatgtcgcat tggcgatggt caacgaagaa
    15361 ttcccgtcgc tcgtcgccgg cgcaatcggc ctgatggtgt ccgtattcgc cgccaaccaa
    15421 ggctggggct tgagcaaaga ccacgccaaa gacccgaatg ccgaaaaagt gccgttcgcc
    15481 caagtcgcca aagcactcgc ccctttgggt atgctgatcg gcatgctggt ggttacgcgc
    15541 atcaaacagc tcggcatcaa aggcattttg accagcaaag aagaatggtt cagcttccaa
    15601 ctgccgtttg atttgtccaa aatcaccgtc agcgactccc tgacgattac cttcggcaat
    15661 attttcggac aagatgtcag cgcgtcttac caaacgctgt acgtcccggc ttggattccg
    15721 tttgtgctga ccgtttggat ttgcatcctg ctgtataaaa ccaaattcaa agatgcctgg
    15781 acgatttatt ccgtaacttt caatcaaacc aaaaaaccgc tgcttgccct gatgggcgcg
    15841 ctgattatgg ttcagctgat gctggtcggc ggcgacaatt cgatggtgaa aatcatcggt
    15901 aaggaatttg ccgcaatggc gggcgaacac tgggtttatt tctcgccgta tctgggcgcg
    15961 atcggtgcgt tcttctccgg ctccaacacc gtgtccaacc tgaccttcgg accgattcag
    16021 cagcaaatcg ccttggatac cggcctgtcc gttaccctga ttctggcgtt gcagtccgtc
    16081 ggcggcgcga tgggcaatat ggtgtgcctc aacaacatca tcgccgtatg taccgtattg
    16141 gatgtgaaaa attccgaagg tgcgattatc aagaaaaccg ttatcccgat ggcgatttac
    16201 ggcgtgattg ccgtcgtcgc ggcaatgatt ttcttcctct aggcgaaacg ccaccatcca
    16261 tagcggcagc acgcggggaa cggaaaccgc cgttccccgt ccgggcggcg catcgggcag
    16321 aatctcggtg ccggaacagc ccgccccgcc aaacaaatgc cgtctgaaac cggaaaaggc
    16381 ttcagacggc atttttccgc cgcttgcgtt caggcgtaat gatgatgcgg catcttgccg
    16441 tcaaggcggt agcgcgtgcc gcagtacggg caggcaacgc tgcccgattc tccttcgcac
    16501 aaaggcaaaa acactctcgg atgcccgttc cactgctcgt tgtcgggtcc cgagcaatac
    16561 agcggcagat tttccggcaa cacggaaatt tcctgcagat tcagattgtc catttgattt
    16621 tcctttgcgt ggttggcgtg cgcccatttt acgccatcgg caggctaaag gatattttcg
    16681 gcgcaaagcc gcaatccgct ataatcccca cttttcagac ggcataccat gactgcgctt
    16741 acccttccgg aagacatccg ccaacaagag ccatccgccc tgctctatac cctcgtttcc
    16801 gcctacctcg aacacaccgc ccaaaccggc gacgaatccc tctcctgcct gtccgacgac
    16861 cagcacacgc tgaccgcatt ctgctacctc gacagccaag tcgaagaagg cggcttcgtg
    16921 caactcatcg cctccggtta cggcgaatat attttccgca acccgcttgc cgacagcctg
    16981 cgccgctgga aaatcaaagc cgtgccgaaa gtcttggaca aagccaaagc cctctacgaa
    17041 caacacggca aaaccatcga aacgctcgcc gacggaggcg cagacatcga atccctgcgc
    17101 aaacagttcc ccgactttga agaatgggac ggcgcatact acgaagccgc cgaacaagac
    17161 ctgcccctgc ttgcagaaca catacagtca aactgggaaa ccttcgccca tatcgggcag
    17221 gcgtgattgc gtctgtttcc agcccgtgta aaacagcgta aaatcggcaa acccgaatga
    17281 ccttccgtcc ccatcaagga gcaagctatg ttcttcaagc acatcgaagc cgcccccgcc
    17341 gatccgattc tcggtttggg cgaagcgttc aaagccgaaa cccgccccga aaaagtcaac
    17401 ctcggcatcg gcgtttataa agacgcatcc ggcgcgacac ccctcgtcaa agccgtcaaa
    17461 gaagccgaaa aacgcctgtt ggaaagcgaa accaccaaaa actacctcac catcgacggc
    17521 gttgccgact acaacgcgca aacccaaatc ctgctgttcg gcaaagacca cgaaatcatc
    17581 gccagccgtc gcgccaaaac agcgcaaagc ctcggcggta cgggcgcatt gcgtattgcg
    17641 gccgagtttg ccaaacgcca gttgaacgcg caaaccatct ggatttccaa tccgacttgg
    17701 cccaaccaca acgccatcgc caaagcggtc ggtatccaag acaaacctta tcgttactat
    17761 gatgccgcca aacacggttt ggattgggac ggcatgattg aggacttgag ccaagcgcaa
    17821 aaaggcgaca tcgtcctgct gcacggctgc tgccacaatc ctaccggcat cgaccctacg
    17881 cccgaacaat gggaaacttt ggcaaaactt tctgccgaaa aaggctggtt gccgctgttt
    17941 gactttgcct accaaggctt cggcaatggt ttggaagaag atgcctacgg cttgcgcgtg
    18001 ttcttgaaac acaatacaga attgctgatt gccagctctt attccaaaaa cttcggtatg
    18061 tacaacgagc gcgtcggcgc gttcactttg gtggccgaag atgaagaaac agcagcccgc
    18121 gcccacagcc aagtcaaaac catcatccgt accttgtatt ccaacccggc ttcacacggt
    18181 gcgaacacca ttgcgctggt gttgaaaaat gatgatttga aagcacaatg gattgccgaa
    18241 ctcgatgaaa tgcgcggccg catcaaagcc atgcgccaaa aatttgtcgg gttgctcaaa
    18301 gccaaaggtg caagccaaaa ctttgatttc attatcaaac aaaacggtat gttctctttc
    18361 agcggcttga ctcccgaaca agtcgaccgc ctgaaaaacg agtttgccat ttatgccgtc
    18421 cgctccggcc gcatcaacgt cgccggcatt accgacgaca acatcgatta tctgtgcgaa
    18481 agcatcgtga aagtcttgta aaacaaaagc gcatacgaaa tgccgtctga accttaacca
    18541 gttcagacgg catctgtttt ttgttaaaaa acaataaacc ataacaattt caaacaagct
    18601 aaaaaacatc tataaaatca acccaatatg atgaactcaa ataaaaaata cgaatatcat
    18661 cattctcaaa ttcaaaattt gaacgccaca gtattatccg aagccacaaa aacctttccg
    18721 ccgtcattcc cgcgcaggcg ggaatccggg aacccaatgc tgcaagaatt gattagaaac
    18781 aactgaaacc gagcaaactg gattcccgcc tgcgcgggaa tgacgaaata aggcgagtaa
    18841 aactgatgaa acaaattgat taaaaacaat aacttatatt attttattta aattttcgat
    18901 aaaatcaatt ttccgtattc aatactgctc caatcaattc ccgcgcaccg tcgtccgcca
    18961 atttcttagc gacagcgcgt ccgagcgcgt cggcatattc ggcaggggct tgcgcgtccg
    19021 cctgcaacac aaccgaaccg tcggggtgtc cgaccagtcc gcgcaaggtc agcaagccgt
    19081 tttcttccgt gcaatatgcg gccagcggca cttggcagct tccgcccaaa gcgcgcgcca
    19141 aagctcgttc ggccgtaacg caggcgtgtg tggtatcgtg gtttagcggt tttaaaacct
    19201 catacaaatc ttcgcggtgc gcggcaattt cgatacccaa tgcgccttgt ccggcggcag
    19261 gcaggctgtc ggattccgac aaaatcatgc ggatgcgtcc gtccaatttc agacgctgca
    19321 aaccggcggc agccaagata attgcgtcgt attcgccgtt atcgagtttg gacaaacggg
    19381 tttgcacatt gccgcgcaaa ggtttgataa gcaaatgcgg atagcgcgca cgcaactggg
    19441 cttcgcggcg caggctggat gtgccgacaa ccgcgccttc gggcatttct tccaaacgcg
    19501 tgtattggtt ggacacaaat gcgtcaaacg gattggcgcg ttcgccgatg gccgcaagcg
    19561 cgaaaccttc aggcaaatcc atcggtacgt ctttaatcga atgcaccgcc aaatcggcgc
    19621 gcccgtcata taaagcctgt tccaactctt tgacaaacaa gcctttaccg ccgacttttg
    19681 acaaagtttt gtccaaaatc tgatcgccgc gcgtggtcat gcccaaaatc tcgacttcgc
    19741 aatcgggata cagagccttc agacggcctt ggatatgctt tgcctgccac atagcaagca
    19801 ggctttcgcg gctggcgatg acgagttttt tcgggttcat gttcaatgcg ttcaaagaat
    19861 ggaaacggcg tgaagtctat catattttga acgtttcttc agacggcacc gtcaggtcta
    19921 tgttatattt acacccacaa aacacgaaac ccgccacaat gaaacgcacc aaaaaatacc
    19981 ctttcttaac gttgcagcgg caacgtttcc atttgaactt tgaaaacgcc tcttccgccg
    20041 ccggcatccc agccgaacgc gatttctacc gctgggcgtg gtctgccttg aaaaatgaat
    20101 accgccgcgc cgacatcagc ctgattcttt tggacgaaga agaagcccgc gactacaacc
    20161 gcgactaccg gggcaaagat tacgccacca atgtcttgag tttcgcgctc aacgaaggcg
    20221 aaaccctgcc ctgccaagtt tcggaaaaac tgtacggcga tttgattatc tgcccgcaag
    20281 tggttttgaa agaagccgcc gaacaaggca aaacacccga gcagcatttt gcccacctga
    20341 ccatacacgg tactttacac ctgatgggct acgaccacat cgaagacgac gaagccgaaa
    20401 taatggaagc cgaagaaatc cgcctgatgc gggcggcagg cttccccaac ccctaccaag
    20461 aggacggaca ttaaaatgga cggcgcacaa ccgaaaacaa atttttttga acgcctgatt
    20521 gcccgactcg cccgcgaacc cgattccgcc gaagacgtat taaacctgct tcggcaggcg
    20581 cacgagcagg aagtatttga tgcggatacg cttttaaggt tggaaaaagt cctcgatttt
    20641 tccgatttgg aagtgcgcga cgcgatgatt acgcgcagcc gtatgaacgt tttaaaagaa
    20701 aacgacagca tcgagcgcat caccgcctac gttatcgata ccgcccattc gcgcttcccc
    20761 gtcatcggcg aagacaaaga cgaagttttg ggcattttgc acgccaaaga cctgctcaaa
    20821 tatatgttta accccgagca gttccacctc aaatccattc tccgccccgc cgtcttcgtc
    20881 cccgaaggca aatcgctgac cgccctttta aaagagttcc gcgaacagcg caaccatatg
    20941 gcgatcgtca tcgacgaata cggcggcaca tccggtttgg tcacctttga agacatcatc
    21001 gagcaaatcg tcggcgaaat cgaagacgaa tttgacgaag acgatagcgc cgacaatatc
    21061 cacgccgttt cttcagaacg ctggcgcatc cacgcggcta ccgaaatcga agacatcaac
    21121 accttcttcg gtacggaata cagcagcgaa gaagccgaca ccatcggcgg cttggtcatt
    21181 caagagttag ggcatctgcc cgtacgcggc gaaaaagtca tcatcggcag cctgcaattt
    21241 accgtcgcac gcgccgacaa ccgccgcctg catacgctga tggcgaccca cgtgaagtaa
    21301 gcagagcctg cccgcaccgc cgtttctgca cagtttagga tgacggtacg gacgttttct
    21361 gtttcaatcc gccccatccg ccaaacataa aaatgccgtc tgaaaccgga aaacaggttc
    21421 agacggcatt tcgcttatcc gcttattttt tgctcaaagt cagccccgtc caaccgaata
    21481 acagggtcaa agccaaactc aaatagcaga aaaaggcata cggcagatat tcccaaaccg
    21541 gcacgcccag cgcgtggctg atgaacacgc cgcatacgct ccacggtacg agcgggttaa
    21601 tcaccgtccc cgcatcttcc agcgtccgcg acagattgcg cgaatgcaga ccgagcttat
    21661 cgtaaacggg tttgaacgtt tcacccgaca acaaaatact caaatattgc tcgccgatca
    21721 ggaaattaac cccgaccgaa gtcatggcaa cgctgaatgt ggcacgtccg gcattcgtca
    21781 aaaagctgcg gacggcatcc agcagggaag gaatcgcgcc cagcgcaaac agcagcccgc
    21841 ccaaactcat cccgagaatc acgatggttt gcgtgaaaaa catactttcc aagccgccgc
    21901 gcgaaatgag tttggcgatg tctttaaacg cttcgccttc gagtttgtag ccgccgtaaa
    21961 accacgcgcc gagctgacgc agatcgggcg tgctgtgcag atacgttacg gcaacggcgg
    22021 caatgacggt aaagagcatg gcgaccacgg cattgacgcg catcaatgcc aaaacgacca
    22081 acagtgcaaa cggaatcagc gaatagccgt gcaccaatcc cgtggcttca agctggctgc
    22141 ggaaggattc gacgctgttc aaatcctgcg cggcgacact gggaagaagc cacagcatca
    22201 gtgccgcact gatgagccac gcgggaatgg tggtgtacat catatttttg atgtgctcaa
    22261 acaggtcgat gccgacgatg gacgcggaaa tgcccgtggt gtcggaaagc ggggacattt
    22321 tgtcgccgaa aaacgcaccg gaaacaatcg cgcccgccgt catcgccata tcggcatgaa
    22381 acgccgccgc catccccata aaggcaacgc cgacggtggc gcaggtggtc aggctgctgc
    22441 cgatggatac gccgatgacg gaacacagcg cgaaagcgga aaaataaaaa taagtcgggg
    22501 aaatcagccc gaaaccgtaa tacatcagcg tcggaatcgc accgctcatc atcagcgcgc
    22561 tgaccatcag cccgatgaag aaaaacaggt aaatcgcgcc cataccctga ttcaacgcgc
    22621 ctatcatgcc ctgctgcata tcgttgtatt tcaaaccgcg cgccaagccg tacaaaatca
    22681 gcacgacgat ggcggcaata atggacatat gcggcagcca ctccaatgaa atgatggtat
    22741 agcccatcgc ggcaatcaga gcgacgacga cggcaagtgc ctcaccgcgc ggcatatcga
    22801 gtaaggattt gaaagcgaac atgattcttt gcccgatttg atataaagtt aacggattct
    22861 aacacactat accgaatccg cccgacgttt tcagacggca ttttagcgtt ttacaaaagc
    22921 cggacagaaa caaaacggca attttctcaa tttaaattaa tttttttgaa atataatttt
    22981 ttattttttt gtttgttgac atataagact tttatggatt gaagtattaa aacctcggca
    23041 cacacgccgc aaacaccggt acgcaaaaat gccgtctgaa agatgttcag acgacatttc
    23101 tcaagaaaaa gattatttgt ccgccctata tccgtacacc gcaaaaaaca cgatatacag
    23161 ataacagatg acggaaacga caaacgaaga catcagggtg taagtatctg ccacccagcc
    23221 ctgcacgaca ggaacgaccg caccgccgac aatcgcggta cacagtacac cggaagccgc
    23281 gttggtaaat tttcccaatc ctttggttgc caaagagaaa atcgtcggga acataatcga
    23341 gttgaaaaaa ccgatggcaa gcagcgacca catcgccaca tccgcattgc cgctacccgt
    23401 cgccatcgcg acggcaagca gtacgaccgc agccgatgcg ttaaacgcca aataacggtt
    23461 gggcgcgaat ttcgccatca ccgccgaacc gaggaaacgt ccgaccatcg cgccgcccca
    23521 atagaacgac aggtaatgcg cggcagaagc atgatccagc cctttcagat aacccaatac
    23581 gttgaccatc aacgaaccga tagacacctc cgcgccgaca tagcagaaaa tgcctgccgt
    23641 accgaacacg agatgtttgt attgccatac gctggttttg ccgtcgtggt tgtgcgcgct
    23701 ttcctcggcg gcaattttgc gcgcgtcggg cagccagatc attttcacga aaacggcaag
    23761 gataatcagc agccccgcca gtcccaaata gggaatctgt acggaagaaa tctgttccgc
    23821 cttgctgacg gtttgggttg cgtccgccag aatcaggaac gcgccgattt gcggcgcaat
    23881 ggtcgtaccc aaagcgttaa acgcctgaac cagcgtcagt gttgccgatt ccttgccggg
    23941 tttcgccagc agggtaacat aaggattacc ggcgacctga agcagcgtta cgccggaagc
    24001 caaaataaac aacgcgccca aaaataccgc gtaagaatgg ctacccgcag caggataaaa
    24061 cagcaggcat ccgaccgccg tcagcagaaa gccgccgata acgccgtttt tgtagccgac
    24121 tttgccgaca aaagccccca tcgggatgga catcaccgca taggcggtaa agaaacagaa
    24181 ttggatcagc atcgcctgaa cgtaagacag gtcgaaaatt tctttcaaat gagggataag
    24241 gatgtcgttc atgcaggtaa taaaacccat catgaagaac agcgtggtca agacgaccaa
    24301 tggggacgta tgattgtttt gtgattgcgc agacatgatt tgcctttcgt ggtgtcggaa
    24361 tattacccgt ttcaagaaaa tagaaattga catttcttaa cggcaatgca aatcatactg
    24421 atatttgaac attttgcaaa ctttatcgga tgcaggcaat gcgccgatct gaaattcaag
    24481 cagcagaaat taatatttta cagttgcttg catagatttt aatagatttt aaaaaattcc
    24541 ggcggacttg caaaaaccgt tcccaataaa atgaaaatcc gccgccgtat ccggaaaatt
    24601 cggaaatgcc gcatcgtggc atcaaaaccg gagcggaaag aatgtcgtat gcccgacaaa
    24661 aaaggggcat acggctgtgc cgtatttttt gcaccgtcct ccgcccttcg gcgggggcgt
    24721 gaaaatatag tggattaaca aaaatcagga caaggcgac
//
LOCUS       DAWKJW010000011        22263 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.011, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000011 DAWKJW010000000
VERSION     DAWKJW010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22263
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.011"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(120..1034)
                     /locus_tag="WJJ54_000365"
     CDS             complement(120..1034)
                     /locus_tag="WJJ54_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ7341274.1"
                     /translation="MDAVQLKSFVAVAHEGNLTQAAKRLFLSQPAVSAQIKALEEYVG
                     TPLFRRTGKGMVLTRAGEILLPEAESLLQYKHKLEYFAKTLAGDYSEETSLGIIHPID
                     SAKLVALTDNIGQTAPKTRLHIQYGMSGEILSRIQHKTLHGGFILGNAAQRGIRSVFL
                     QNLTYALICPQSQYPHLTRSLPQSLQECVWIEMSGVSGSRKHLHQFWRSNRLSPKKQI
                     LCDYPQTIIDLVAGGIGVAMVPGNKAEAAAKEGAGVAIIESCRHSMPLNFIYAEEYED
                     NPHVSLLLECIEKVWGVQAVQPPVVSDN"
     gene            1290..2759
                     /locus_tag="WJJ54_000366"
     CDS             1290..2759
                     /locus_tag="WJJ54_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3360 family protein"
                     /protein_id="HEZ7341275.1"
                     /translation="MEKHNGTYRDLHRPASEFATRDEYLEHELQIMQPKRWRPNLPFR
                     DYRFEWEDLIPAMAGTIGKVVMVGAVAAAFAAPLGLPDSFVLENVRYELLIAAAFILL
                     VSGFFLPGANLPGTHGPLIPMIPIVVSAGGHPLAFGISIAVLGLLMALFRGGSIMAKL
                     TSNGVCGGLLLYLGFIGTTGQVKKLFSWAGGFNMPYIAFTVIIVTIVMYALLEHWKKR
                     WLAVPLGCLIAGVVAFALGAPFEFHTAPGLPPMSPAYWWGENSGWHLGLPTAESFLVV
                     FPFAVLAVAMWSPDFLGHQVFQKISYPEKTDKVLMNIDDTMTSCSVRQAVGSILGGAN
                     FTSSWGTYIVPASIAKRPIPGGAVLTAVLCIIAGLWGYPMDLAIWQPVLSVALVVGVY
                     LPLLEAGMEMTRKGKTTQSAAIVVFSSALVNPVFGWALTMLLDNLGLIGCKERSAQLG
                     FAGRVLIPAVGFLILCVAMGAVGMLPGIPPFLEHFKSLG"
     gene            3011..3382
                     /locus_tag="WJJ54_000367"
     CDS             3011..3382
                     /locus_tag="WJJ54_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341276.1"
                     /translation="MNKTLSILPAVILLGGCAVGGGNTFGSLDGGTGMGGSIVKMAVE
                     SQCRAELDRRSEWRLTALAMSAEKQAEWENKICACVAQEAPERMTGNDVMQMLDPSTR
                     NQALAALTAKTVSACFKHLYR"
     gene            3455..4864
                     /locus_tag="WJJ54_000368"
     CDS             3455..4864
                     /locus_tag="WJJ54_000368"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEZ7341277.1"
                     /translation="MKYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQIGRETLD
                     KWRGLAYPELAFEIMRLFVTDIPEDDLRDILNRTYTEAAFGTKEITPVRTLSDGIKIQ
                     ALSNGPTLAFKDMAMQFLGNAFEYVLNKEGKKLNILGATSGDTGSAAEYALRGKKGVN
                     VFMLSPDGKMSAFQRAQMYSLQDGNIHNIAVKGMFDDCQDIVKTVQNDAAFKEKYHIG
                     TVNSINWGRIVAQVVYYFAGYFKATQSNDEQVSFCVPSGNFGNVCAGHIAKQMGLPVR
                     RLIVATNENDVLDEFFKTGAYRPRNSAHTYVTSSPSMDISKASNFERFVFDLMDRDPQ
                     EINTLWAEVAAGKGFDLRFALDKVGGKYGFTSGKSTHADRLATIKQVYGQDQELIDPH
                     TADGVKVAREVREEGETVVCLETALAAKFDATIREAVGDVAIPRPAALEGLETLPQRV
                     QTVPNSADAVKGIIEQTLA"
     gene            4910..5704
                     /locus_tag="WJJ54_000369"
     CDS             4910..5704
                     /locus_tag="WJJ54_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341278.1"
                     /translation="MTLPMQETRFSILLDELAAKQKAAIAPHLLADGSKVWIRKAGRH
                     NARWRYALLGMVARYLKLGVLKPVPSLGGEPAIATESKRLYELRAAGIAVPELLAVRK
                     NALMFGNLEGIPLDTQIRQEAEAGKADAWLAGLEAIARVHKKQQFLSQAFARNMMSDG
                     KNISFLDFEDDPSEVLTIAQCQARDWLCYIHSTALILKNGGLLEAAAEKWGGVLSDQP
                     AEIQKLIAATVKPILPIRRLEHPRWGRDALRLAASISLISLADMPP"
     gene            5892..6668
                     /locus_tag="WJJ54_000370"
     CDS             5892..6668
                     /locus_tag="WJJ54_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HEZ7341279.1"
                     /translation="MAAFNTQKVLSVHHWTDAYFTFTCTRDESLRFENGQFVMVGLMV
                     DGKPLMRAYSVASANWEEHLEFFSIKVQDGPLTSRLQHLKVGDDVLISKKPTGTLVAG
                     DLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKEL
                     PEHEYLGDLVKEKLIYYPIVSREDFEHHGRLTDLMVSGKLFEDIGLPKINPQDDRAML
                     CGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ"
     gene            complement(7335..9806)
                     /locus_tag="WJJ54_000371"
     CDS             complement(7335..9806)
                     /locus_tag="WJJ54_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEZ7341280.1"
                     /translation="MKKTCFHCGLDVPENLHLTVRYENEDRETCCAGCQAVAQSIIDA
                     GLGSYYKQRTADAQKTELPPQEILDQIRLYDLPEVQSDFVETHGGTREAVLMLGGITC
                     AACVWLIEQQLLRTDGIVRIDLNYSTHRCRVVWDDGKIRLSDILLKIRQIGYTAAPYD
                     AQKIEAANQKERKQYIVRLAVAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLM
                     VLPVVFYCAVPFYQGALRDLKNRRVGMDTPITVAIIMTFIAGVYSLATNAGQGMYFES
                     IAMLLFFLLGGRFMEHIARRKAGDAAERLVKLIPAFCHHMPDYPDTQETCEAAVVKLK
                     AGDIVLVKPGETIPVDGTVLEGASTVDESMLTGESLPVAKMPSEKVTAGTLNTQSPLI
                     IRTDRTGGGTRLSHIVRLLDRALAQKPRTAELAEQYASSFIFGELLLAVPVFIGWTLY
                     ADAHTALWITVALLVITCPCALSLATPTALAASTGTLAREGILIGGKQAIETLAQTTD
                     IIFDKTGTLTQGNPAVRRIELLGSMTEAQVLAVAQSLEQQSEHPLARAILNCRISGGS
                     VPDIAIKQRLNRIGEGVGAQLTVNGETQVWALGRASYVAEISGKEPQTEGGGSAVYLG
                     SQSGFQAVFYLTDPLKDSAAEAVRQLAGKNLTLHILSGDRETAVAETARALGITHYRA
                     QAMPEDKLEYVKALQKEGKKVLMIGDGINDAPVLAQADVSAAAAGGTDIARDGADIVL
                     LNEDLRTVAHLLDQARRTRHIIRQNLIWAGAYNIIAVPLAVLGYVQPWIAALGMSFSS
                     LAVLGNALRLHKRGKMQSEKMPSEQ"
     gene            complement(9803..10981)
                     /gene="hflX"
                     /locus_tag="WJJ54_000372"
     CDS             complement(9803..10981)
                     /gene="hflX"
                     /locus_tag="WJJ54_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEZ7341281.1"
                     /translation="MTGRTGGNGSTQAQPERVMLVGVMLDKDGTGSSAARLNGFQTAL
                     AEAVELVKAAGGNPVIVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELT
                     PTQERNLEKILQCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHL
                     QSQRGGIGMKGPGETKLETDRRLIAHRINALKKQLANLKKQRALRRKSRESGTIKTFA
                     LVGYTNVGKSSLFNRLTKSGIYAKDQLFATLDTTARRLYISPECSIILTDTVGFVSDL
                     PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLQEIHAGDIPCIKVYN
                     KTDLLPSEEQNTGIWRDAAGKIAAVRISVAENTGIDALREAIAESCAAAPNTDETEMP
                     "
     gene            complement(10986..12266)
                     /locus_tag="WJJ54_000373"
     CDS             complement(10986..12266)
                     /locus_tag="WJJ54_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEZ7341282.1"
                     /translation="MKSLFIRLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGD
                     ALHYLNRIRAQIGLHKLAHAPVLENSARRHARYLTLNPEDGHGEHHPDNPHYTAQKLT
                     ERTRLAGYLYNGVHENISTEEEAAESSDSDIRTQQRQVDGLMSAIYHRLSLLDRHTDE
                     AGAAFVRENGKTVLVFNQGNGRFERHCAQGRNQPEAGRKYYRNACHNGAVVYTDEAMP
                     AQELLYTAYPVGNGALPYFHGERPDPVPEYEITGNPASIDFSEAAGKITMKSFKLYQG
                     KNEIRPVRVLTAGNDPNGRLTAYQFALFPLKPLEYGTLYTAVFDYVRNGRRAQAKWQF
                     RTRKPDYPYFEVNGGETLAVRKGEKYFIHWRGRWCLEACTRYTYRQRPGSRLSIGRHE
                     AGGIVFSVDGMAGSRITLAPEGETERGVTLYLQD"
     gene            complement(12419..13138)
                     /locus_tag="WJJ54_000374"
     CDS             complement(12419..13138)
                     /locus_tag="WJJ54_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HEZ7341283.1"
                     /translation="MDTTRIVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAMLAS
                     GIDYTIYFYNPNIHPHKEYMLRKEENVRFAEKFGIPFIDKDDDYENDRKEWFAKAKGM
                     EFEPERGIRCTMCFDMRFEKAAQYAHEHGFPVFTSSLGISRWKNMNQINDCGRRAAAP
                     YDDVVYWDFNWRKGGGSARMIEISKRENFYQQEYCGCAYSLRDSNAHRKSQGRIPIKL
                     GVLYYGDESTQYEPAPIRVDK"
     gene            complement(13209..13886)
                     /gene="radC"
                     /locus_tag="WJJ54_000375"
     CDS             complement(13209..13886)
                     /gene="radC"
                     /locus_tag="WJJ54_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEZ7341284.1"
                     /translation="MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAV
                     DLARYLLQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILAEELQESIV
                     LSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKL
                     ALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTSRSVCSF
                     RQLGLMP"
     gene            complement(14009..15358)
                     /gene="gshA"
                     /locus_tag="WJJ54_000376"
     CDS             complement(14009..15358)
                     /gene="gshA"
                     /locus_tag="WJJ54_000376"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEZ7341285.1"
                     /translation="MKLPVMSPEHSAQLQAFEAKILSNHAKIEAWFRTQWSVHRPPFY
                     GSVDIRNAGYKISSIDMNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETAKSVLIIPE
                     NHTRNTFYLQNIYALGEILRSAGYEVRLGSLNPEVTEPTEFETALGDKILLEPLLRTR
                     DRVHLADGFSPCVVLLNNDLSAGIPDILKGISQTVLPPLHGGWTTRRKTNHFGAYNQV
                     TAEFAKLIGIDEWQINPYFEKIGGLDFQGREGEDALAEAVERVLAKIQAKYDESGITD
                     KPFVIVKADAGTYGMGVMSVKSADEVRGLNRKNRNKMAKVKEGLEVSEVIVQEGIYTY
                     ETLNGAVCEPVVYMMDRFVIGGFFRVHEGRGADENLNAGGMVFVPLSNSIPTGNGDNS
                     QEAPEACKRVFEQWDSLGMPRSEKDCDVDNEHNRLYVYGVMARLSLLAASIELEETA"
     gene            15618..17027
                     /gene="leuC"
                     /locus_tag="WJJ54_000377"
     CDS             15618..17027
                     /gene="leuC"
                     /locus_tag="WJJ54_000377"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEZ7341286.1"
                     /translation="MTAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEG
                     LKMAGRKLWRIDSVVSTADHNTPTGDWDKGIQDPISKLQVDTLDKNIKEFGALAYFPF
                     MDKGQGIVHVMGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCI
                     TAKKSKSMLIAVDGKLKAGVTAKDVALYIIGQIGTAGGTGYAIEFGGEAIRSLSMESR
                     MTLCNMAIEAGARSGMVAVDQTTIDYVKDKPFAPEGEAWDKAVEYWRTLVSDEGAVFD
                     KEYRFNAEDIEPQVTWGTSPEMVLDISSKVPNPAEETDPVKRSGMERALEYMGLEAGT
                     PLNEIPVDIVFIGSCTNSRIEDLREAAAIAKDRKKAANVQRVLIVPGSGLVKEQAEKE
                     GLDKIFIEAGFEWREPGCSMCLAMNADRLTPGQRCASTSNRNFEGRQGNGGRTHLVSP
                     AMAAAAAVTGRFTDIRMMA"
     gene            17124..17378
                     /locus_tag="WJJ54_000378"
     CDS             17124..17378
                     /locus_tag="WJJ54_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341287.1"
                     /translation="MNKLFITALSALALSACAGTWEGAKQDTARNLDKTQAAAERAAE
                     QTGNAVEKGWDKTKEAVKKGGNAVGRSISHLGGKIENATE"
     gene            17440..18081
                     /gene="leuD"
                     /locus_tag="WJJ54_000379"
     CDS             17440..18081
                     /gene="leuD"
                     /locus_tag="WJJ54_000379"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEZ7341288.1"
                     /translation="MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFD
                     EWRYLDHGEPGMDNSKRPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDY
                     GFRAVIAPSFADIFFNNCYKNGLLPIVLTEEQVDRLFKEVEANEGYQLSIDLAEQTLA
                     TPGGETFTFDITEHRKHCLLNGLDEIGLTLQHADEIHAFEEKRRQSQPWLFNG"
     gene            18256..19077
                     /gene="dcm"
                     /locus_tag="WJJ54_000380"
     CDS             18256..19077
                     /gene="dcm"
                     /locus_tag="WJJ54_000380"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ7341289.1"
                     /translation="MQQIKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAAL
                     EVLKQNYPDEVPYGDITKIETGDIPDFDILLAGFPCQAFSFAGKRLGFEDTRGTLFFD
                     VARILKAKKPKGFILENVEGLVTHDRKDPTQKIGRTLTVILETLEALGYYVSWKVLNA
                     KDFGIPQNRKRIYLTGSLKSKPDLSFETSPSPKLKNILESGLPTESSPFIKKLLKKFP
                     PSELYGKSVKDKRGGKNNIHSWDIELKGAVTEEEKQLLNILLKERRKKNGLQKSA"
     gene            19092..19526
                     /locus_tag="WJJ54_000381"
     CDS             19092..19526
                     /locus_tag="WJJ54_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEZ7341290.1"
                     /translation="MPLTKAQISTFYKHPNLQNILDSLTDKGYLVLEHPKQKIGGQRI
                     KDESLPKGYNIVSGKKSFEINKILDPNDVAPTLVAMDMEHLFVVDNGGLRTLTGKEGL
                     RLFGYPDDYSFDIPKKDRCDLLGNTVVVPVIKAVSERLLHTL"
     gene            19542..19703
                     /locus_tag="WJJ54_000382"
     CDS             19542..19703
                     /locus_tag="WJJ54_000382"
                     /inference="COORDINATES: protein motif:HMM:NF021105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HEZ7341291.1"
                     /translation="MIKLTAQQIFDKLLDEEKILSANGQIRFFLGDVDIIVKQKDVVG
                     NIIQEWLGG"
     gene            19704..20273
                     /locus_tag="WJJ54_000383"
     CDS             19704..20273
                     /locus_tag="WJJ54_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HEZ7341292.1"
                     /translation="MRKREIEFDVSTNTQMPPDFFLNKKDRSRELLEVKAFNRNAGPG
                     FDIADFKMYSDEIIHKPYMLDVDYLIFGYDMDDNGNVTIKDLWLKKVWQITRSMDGWA
                     INLQVKKGVVHKIRPGVWYSINKKNMPMFECLEDFVSAIEETVYQNPATRHNASLWKK
                     KFEEAYKKHYNRSISIPRWHEIAHKYKKK"
     gene            20307..21377
                     /gene="leuB"
                     /locus_tag="WJJ54_000384"
     CDS             20307..21377
                     /gene="leuB"
                     /locus_tag="WJJ54_000384"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEZ7341293.1"
                     /translation="MTKHIAILQGDGIGPEIVAETVRVLDKLIAQGLDASYEYAPLGG
                     EAYDEYGHPYPEFTQNLCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFA
                     NLRPAVLYPELANASTLKPEIVAGLNILIVRELTGDIYFGEPRGIRVLENGEREGYNT
                     MKYSESEIRRIAHVAFQSAQKRSKKVCSVGKANVLETTELWREIFEEIGKQYPDVELS
                     HMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLY
                     EPSHGSAPDIAGQNKANPLATILSLAMLLRYSLNDEARAQQVENAVQKVLQQGLRTSD
                     IYEEGTKLVSCSEMGDAVLAAL"
     gene            21540..22103
                     /locus_tag="WJJ54_000385"
     CDS             21540..22103
                     /locus_tag="WJJ54_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HEZ7341294.1"
                     /translation="MKKIIFAALAAAAISTASAATYKVDEYHANARFAIDHFNTSTNV
                     GGFYGLTGSVEFDQAKRDGKIDITIPIANLQSGSQHFTDHLKSADIFDAAQYPDIRFV
                     STKFNFNGKKLVSVDGNLTMHGKTAPVKLKAEKFNCYQSPMEKTEVCGGDFSTTIDRT
                     KWGMDYLVNVGMTKSVRIDIQIEAAKQ"
BASE COUNT         5359 a         5888 c         5787 g         5229 t
ORIGIN      
        1 ggcatttcca aagggcattt taagccgtat ttgagagaat gcggatggcg ttttcagtgt
       61 tttcagcgtg ataaaattca aatttctatt ttaaaacaat cagcaaagca ggatttattt
      121 cagttgtccg agacaacggg cggctgcacc gcctgcactc cccatacttt ttcaatgcac
      181 tcgagcagga gtgagacgtg gggattatcc tcgtattctt ccgcataaat gaaattgagc
      241 ggcatactgt ggcggcacga ttcgataata gccacgcccg cgccttcttt tgccgccgct
      301 tcggctttgt ttcccggcac cattgccaca cctataccgc ctgcaaccaa atcgataatg
      361 gtttgggggt agtcgcacaa gatctgtttt ttgggtgaga gccggttgct gcgccaaaac
      421 tggtgcaggt gcttcctact tccggacacg cccgacattt ctatccatac gcattcttgc
      481 aggctctgcg gaagggagcg ggtcagatgg ggatattggc tttgcgggca aatcagcgcg
      541 taggtcaggt tttgcaggaa tacgctgcgg atgccgcgtt gggcggcgtt gccgagtata
      601 aagccgccgt gcagggtttt gtgttggatg cgcgagagga tttcgccgct cattccgtat
      661 tggatgtgca ggcgcgtttt gggggctgtt tgaccgatat tgtccgtcag cgcgacgagc
      721 tttgccgaat cgatggggtg gataatgccc aaactggtct cttccgaata atcgcctgcc
      781 agcgttttgg caaaatactc caacttgtgt ttgtattgca gcagggattc cgcttcgggc
      841 aacagtattt cgcccgcccg cgtcaatacc atgcctttcc ccgtgcgcct gaacagcggc
      901 gtgccgacat attcttcaag ggctttaatt tgggcggaaa cggcaggctg ggaaaggaaa
      961 agtcgtttgg cggcttgggt aaggttgccc tcgtgcgcga cggcgacaaa tgattttaat
     1021 tgtacggcat ccatatatcc ctccttgtgc ggatgttttc tatatttgtg caatcgaaat
     1081 cttttaggcg gattgttgct gaaaattaac tttttaatca agtggtttgt aaattgtatc
     1141 aattttccgg atgatggtta ttaaaaaaaa agattggttt tattgcctgt ttgggcttta
     1201 aatggggtta cggcttccga acgcagcccg tatcaaaaag aaaagtcatg cgcccctttt
     1261 acgaggcgcg atatataagg aggaaggtta tggaaaaaca taatgggact tatcgggatt
     1321 tgcaccgtcc ggcttcggaa tttgcgacgc gggacgaata tttggaacat gaattgcaga
     1381 ttatgcaacc aaaacgctgg cggcccaacc tgccctttcg cgattaccgc ttcgagtggg
     1441 aggatttgat tcctgcgatg gcgggaacga ttggaaaagt ggtgatggtg ggggcggtgg
     1501 cggcggcgtt tgccgcacct ttggggctgc ctgacagctt tgtactggaa aatgtgcgct
     1561 atgagctttt aatcgccgcc gcgtttatct tattggtatc gggctttttt ctgcccggcg
     1621 ccaacctgcc cggtacgcac gggccgctga ttccgatgat tcccatcgtt gtgtcggcag
     1681 gcgggcatcc tttggcgttc ggcatttcga ttgcggtttt aggtctgctg atggctttat
     1741 ttcgcggcgg cagtattatg gcgaagctga caagcaacgg cgtatgcggc ggattattac
     1801 tctatttggg ctttatcggc acgacggggc aggtaaaaaa attgttttcg tgggcaggcg
     1861 gttttaatat gccctacatc gcttttaccg tcattattgt aacgattgtg atgtacgctt
     1921 tgttggagca ttggaaaaaa cgctggttag ccgtgccttt gggatgcttg attgccggtg
     1981 tggtggcatt tgcattgggt gcgccgtttg agtttcacac cgcccccggc ctgcctccaa
     2041 tgagtcctgc ttattggtgg ggtgaaaaca gcggctggca tctggggttg ccgacggcag
     2101 aaagtttttt ggttgtcttt ccatttgcgg tattggctgt tgcaatgtgg tcgcccgatt
     2161 ttttaggaca tcaagtgttc caaaaaatca gctatccgga aaaaaccgat aaggtattga
     2221 tgaatataga cgacaccatg acaagttgtt ctgtccgtca agcagtgggt tctattttag
     2281 ggggtgcaaa ttttacctct tcttggggaa cttatatcgt accggcatcg attgccaaac
     2341 gccccattcc gggcggtgcg gttttaacgg cggttttatg tattatcgcc gggttatggg
     2401 gctatccgat ggacttggcg atttggcagc cggtattgag cgtagccttg gtcgtaggcg
     2461 tatacttacc gcttttggaa gcgggcatgg aaatgacgcg caaaggcaaa accacccaat
     2521 ccgccgccat cgtggtgttc tcttccgcct tggtcaatcc ggttttcggc tgggcgttga
     2581 cgatgctgtt ggataatttg ggcttaatcg gctgcaaaga gcgcagtgcg caattaggtt
     2641 tcgccggacg cgtgttgata cccgcagtag gtttcttgat cttgtgtgtg gcgatgggtg
     2701 cggtcgggat gctgcccggt atcccgccgt ttttggaaca cttcaaatct ttgggctagg
     2761 ctgaaatcgg aaatgccgtc tgaaccgctt tcagacggca tttttgcaaa caggcaaaat
     2821 gacggcggcg ggatttttta ttttcccgat tgaagtataa tgttgccggg cttcaaccgg
     2881 atattcaaaa cggtttgttc caacactcgg aacggcgcat aaaacgccgc ccttcgcgtt
     2941 atcccgaacg gggcggctaa tcagattcta tcgccataaa aggcggggtt tcaaccgaaa
     3001 aggaattgag atgaataaaa ccttgtctat tttgccggcg gtaatcttac tcggcggctg
     3061 cgccgtcggc ggcggtaaca cattcggcag cttggacggc ggcacgggta tgggcggcag
     3121 tatcgtcaaa atggcggtcg agagccaatg ccgcgcggaa ttggacaggc gcagcgaatg
     3181 gcgtttgacc gcgctggcga tgagtgccga aaaacaggcg gaatgggaaa acaagatttg
     3241 cgcttgcgtc gcccaagaag cccccgaacg gatgaccggc aacgatgtga tgcagatgct
     3301 ggatccgtcc acgcgcaatc aggcacttgc cgccctgacc gccaaaacgg tttccgcctg
     3361 cttcaaacac ctgtaccgct aaccttcttc agacggcatg aggcagatgc cgtctgaatc
     3421 cgttttcctg caatttcgac agacgagaaa aatcatgaaa tatatcagca cgcgcggcga
     3481 aaccgcacac aaaccgttca gcgaagtttt attgatgggg cttgcccccg acggcggcct
     3541 gatgctgccg gaacattatc cgcaaatcgg gcgcgaaacc ttggacaaat ggcgcggttt
     3601 agcttatccc gaattggcgt ttgaaattat gcgcctgttt gttacggata ttccggagga
     3661 cgatttgcgc gacattctga accgtactta cacggaagcg gcgttcggta ctaaggaaat
     3721 cacccccgtc cgcacgcttt cagacggcat caaaatccaa gccttgtcca acggcccgac
     3781 gctggcgttc aaagatatgg caatgcagtt tttgggcaat gcgtttgaat atgttttaaa
     3841 caaagaaggc aaaaaactca atatcttggg cgcgaccagc ggcgatacgg gttcggctgc
     3901 ggaatatgcc ttgcgcggca aaaagggcgt gaacgtattt atgttgtcgc ccgacggcaa
     3961 aatgagcgcg ttccaacgcg cgcaaatgta cagcctgcaa gacgggaata tccacaatat
     4021 cgccgtgaag ggaatgtttg acgactgtca ggatattgtg aagacggtgc agaacgatgc
     4081 cgcgttcaag gaaaaatacc atatcggtac ggtcaactcg attaactggg gacgcatcgt
     4141 cgcgcaagtg gtttattact ttgcgggcta tttcaaggcg acgcaaagca atgacgagca
     4201 ggtcagcttc tgcgtgccga gcggcaactt cggcaacgtt tgcgcgggac acatcgccaa
     4261 acaaatgggc ctgcctgtcc gccgcctgat tgtcgcgacc aatgaaaacg atgtattgga
     4321 cgagtttttc aaaaccggcg cgtaccgccc gcgcaacagc gcgcatactt atgttacctc
     4381 cagcccgtcg atggacattt ccaaagcgtc caacttcgag cgtttcgtgt tcgacctgat
     4441 ggatcgcgat cctcaggaaa tcaatacgct gtgggcggaa gtagcggcgg gcaagggctt
     4501 tgacctgcga tttgccttgg acaaagtcgg cggcaaatac ggctttactt ccggcaagtc
     4561 cacccacgcc gaccgcctcg ccactatcaa gcaggtttac gggcaagacc aagaactcat
     4621 cgacccgcac actgccgacg gcgtaaaagt cgcccgcgaa gtgcgcgaag aaggtgaaac
     4681 ggtggtttgt ttggaaaccg cgttggcggc gaaattcgat gcgaccatac gcgaagccgt
     4741 cggcgatgtc gccattccgc gccccgccgc gctggaaggt ttggaaacat tgccgcagcg
     4801 cgtgcaaacc gtgccgaaca gtgcggatgc ggtaaaaggc atcatcgaac aaacccttgc
     4861 ctgatgttcc gtacaggggc attccgtccg aacttaagat tgaaagaaaa tgaccttacc
     4921 tatgcaggaa acccgttttt ccatactgct agacgaattg gcggcaaaac agaaggcagc
     4981 catcgccccc cacctgcttg ccgacgggag caaggtatgg atacgcaaag caggcaggca
     5041 caatgcgcga tggcgttacg cgctgctcgg tatggttgcc cgatatttga aactgggggt
     5101 gttgaagccg gttcccagcc tcggcggcga gcctgccatt gcaaccgaat caaaacgcct
     5161 gtacgaattg cgcgcggcgg ggatagccgt tcccgaattg ctcgccgtca ggaaaaatgc
     5221 ccttatgttc ggaaatttgg aaggtatccc gctcgatacg caaatccgcc aagaagccga
     5281 agccggaaag gcggacgctt ggcttgccgg tttggaagcc attgcacgcg tgcataaaaa
     5341 acagcagttc ctcagtcagg cgtttgcacg aaatatgatg tcggacggaa aaaacatcag
     5401 ctttttggat tttgaagacg acccttccga ggtcctgacc atagcgcaat gccaagcccg
     5461 cgattggctc tgctacattc attcgaccgc gctgatattg aaaaacggcg gactgctgga
     5521 agcggctgcg gaaaaatggg gcggcgtatt gtcggatcag cctgccgaaa tacaaaagct
     5581 gattgccgcc accgtcaaac cgatcctccc gatccgcagg ctggaacacc cacgctgggg
     5641 acgggacgca ctcaggctgg cagcctcgat ttccctgatt tcccttgccg atatgccgcc
     5701 ataagccgcc gcccgccccg cgatgccgtc tgaagccctt cagacggcat ataaccaacg
     5761 cgcatcaagc attgtcgcaa ccatccgttt cgtttagaat tttggcttta tcccgaatcg
     5821 ggcagacatt tccactctgc cgcacctccc gaacaagcac tatccatttc ttttactgac
     5881 aggaaaccca aatggcagca ttcaataccc aaaaagtatt gtccgtacac cactggacag
     5941 acgcatattt tacctttacc tgcacccgcg acgaatcgtt gcgctttgaa aacggacagt
     6001 tcgttatggt cggattgatg gtggacggca agccgctgat gcgcgcatac agcgtcgcct
     6061 ccgccaactg ggaagaacac ctcgaatttt tcagcattaa agtccaagac ggtccgctga
     6121 ccagccgcct gcaacacctc aaagtcggcg acgacgtgtt aatcagcaaa aaaccgaccg
     6181 gaactctggt tgccggcgac ctgaatccgg gcaaacacct ttacttgttg agcaccggta
     6241 ccggcatcgc ccctttcttg agcatcacca aagaccccga gatttacgag caatttgaaa
     6301 aaatcatcct cgtacacggc gtgcgctaca aaaaagattt ggcgtactac gaccgcttta
     6361 ccaaagaatt gcccgaacac gaatacctcg gcgacttggt taaagaaaaa ctgatttact
     6421 acccaattgt ttcccgagaa gactttgaac accacggccg cctgaccgac ctgatggtaa
     6481 gcggcaagct gtttgaagac atcggcctgc ccaaaatcaa cccacaagac gaccgcgcca
     6541 tgctgtgcgg cagccccgcg atgctgaaag acacctgcaa agttttggac gatttcggac
     6601 tgaccgtctc tccgaaaaca ggcgtgcgcg gcgattacct gattgagcgc gcatttgtgg
     6661 atcaataagc tgcttgaaaa tgccgtctga acggcatcag cgataaaaaa ccccgaatcc
     6721 tgccaatcag gattcggggt ttttatagtg ggtaaaaatt agaaatgcac atttccgtca
     6781 ttccaacaca ggtgggaatc cggacttacc tgtttcatta tcgtttgaaa ataaaagaga
     6841 aaccaaacat atagattccc gcttgcgcgg gaatgacgac ggtgttttgc cgtagccaaa
     6901 gcagaaaaac atccctattg tcatttcatc atgatatgac aataggatgt taaaaattaa
     6961 ttatcattat atgattgata tataagaaaa actgtcccaa taagaaatgt tatgcagaaa
     7021 ataaaatgaa aaggatggtt ttcattgaaa atggttgttc tgccaccgtc atacacagag
     7081 ccagtatttg gaaaaaaatg atccatattg acatcattat tccatttgtc gcataaatcc
     7141 actttttaat tttttccaca ttaatataat ctcttattta ataaaatcaa aataaaaatc
     7201 aaatgcctaa caattcgatc tcaaattttg aacgccaacg tgtttgagcg gtaacaatac
     7261 atactttaag tttgcaatcc ttcatcgtct tatttttgtt ttcatcaact atacgtctaa
     7321 agcaacgccg tccgtcattg ttcggacggc attttttcag actgcatttt cccccgtttg
     7381 tgaaggcgca gggcgttgcc caaaaccgcc agcgaactga agctcatacc cagtgcggct
     7441 atccacggtt ggacatagcc caaaacggca agcggtacgg caatgatatt gtacgcgccc
     7501 gcccatatca ggttttgccg gataatatgg cgggtgcgcc gcgcctgatc gagcaggtgg
     7561 gcgacggtac gcaaatcttc gttcaataac acaatgtccg cgccgtccct cgcaatatcc
     7621 gtcccgcccg ctgcggcggc ggatacgtct gcctgcgcca aaacgggcgc gtcgttgatg
     7681 ccgtcgccta tcatcagcac ttttttccct tctttttgca aggctttgac gtattccagc
     7741 ttgtcctcgg gcatggcttg ggcgcggtag tgcgtgatac ccagggcgcg ggcggtttcg
     7801 gcaacggcgg tttcgcggtc gccgctgagg atgtgcaggg tcaggttttt gcctgccaac
     7861 tgccgcaccg cctccgccgc gctgtctttc aaggggtcgg tcaggtagaa cacggcttgg
     7921 aaaccgcttt gactgccgag gtaaaccgcg ctgccgccgc cttctgtttg cggttcttta
     7981 cctgaaattt cggcgacata ggatgccctg cccaatgccc aaacctgtgt ttcgccgttg
     8041 acggtcagtt gcgcgcccac gccttcgccg atgcggttga ggcgttgttt aatagcaatg
     8101 tcggggacgc tgccgcctga aatgcggcag ttgaggatgg cgcgcgcgag cgggtgttcg
     8161 gactgctgtt ccaaactttg cgccactgcc agcacttggg cttcggtcat gctgccgagc
     8221 agttcaatcc ggcggacggc gggattgcct tgggtcagcg tgcctgtttt gtcgaaaatg
     8281 atgtcggtgg tttgggcgag ggtttcgatt gcctgctttc cgccgattaa aataccttcg
     8341 cgcgccagcg taccggtaga agctgccagc gcggtcggcg tggcaagcga taaggcgcag
     8401 gggcaggtaa tgaccagcag ggcgacggta atccacaatg cggtgtgcgc gtcggcgtac
     8461 agcgtccagc cgatgaagac tgggacggca agcaggagtt cgccgaatat gaaagacgag
     8521 gcatattgtt ccgccaactc ggcggtgcgc ggtttttgcg ccaaggcgcg gtcgagcagg
     8581 cggacgatgt gcgacagtcg cgtgccgccg ccggtgcggt cggtgcgtat aatcaggggg
     8641 ctttgcgtgt tgagtgtacc tgcggttact ttttcagacg gcattttggc gacgggcagg
     8701 ctctcgccgg tcagcataga ttcgtcaacc gtgcttgcgc cttccagcac cgtgccgtca
     8761 acggggatgg tttcgcccgg tttgaccagc acgatatcgc ccgccttcaa tttgacgaca
     8821 gctgcctcgc aggtttcctg cgtatcgggg taatcgggca tatgatggca aaacgcagga
     8881 atcagcttca ccagcctttc ggcggcatcg cctgccttgc gtcgggcaat gtgttccata
     8941 aagcgtccgc ccagcaggaa aaacagcagc atggctatgg attcgaaata catcccctgc
     9001 cccgcattgg tcgcaaggct gtaaacgccg gcgataaagg tcatgatgat ggcgacggta
     9061 atcggcgtat ccatgccgac gcggcggttt ttcaagtcgc gcagcgcgcc ttgataaaac
     9121 gggacggcgc aatagaatac gacgggcagc accattaaaa agccgcccca atggaggatt
     9181 tgcaggaaat cgggttcgat gtcgccgccg taaaggtagg tcggcagcgc gaacatcatc
     9241 gtctgcatca tccccagccc ggcaacggcg aggcggacga tgtattgttt gcgttctttt
     9301 tggttggcgg cttcgatttt ttgcgcgtca tagggtgcgg cggtgtagcc tatctgcctg
     9361 attttcaaca gaatgtcgga aaggcggatt ttgccgtcgt cccagacgac gcggcagcgg
     9421 tgcgtgctgt aattgaggtc gatgcggacg atgccgtctg tacgcaaaag ctgctgttcg
     9481 atcagccaga cgcaggcggc gcaggtgatg ccgccgagca ttaaaaccgc ctcgcgcgtg
     9541 ccgccgtggg tttccacaaa gtcggactgg acttcgggca ggtcgtacag gcggatttgg
     9601 tcgaggattt cttggggcgg cagctcggtt ttttgcgcgt cggcggtgcg ttgtttgtaa
     9661 taactgccca agcccgcgtc aataatgctt tgtgcgaccg cctgacagcc ggcgcagcag
     9721 gtttcgcggt cttcgttttc gtaacggaca gtcagatgca ggttttcggg aacatccaga
     9781 ccgcagtgga aacaggtttt tttcatggca tttcggtttc gtctgtgttt ggtgcggcgg
     9841 cacaagactc ggcaatggct tcgcgcagtg cgtctatacc ggtattttca gcaacggaaa
     9901 tgcggacggc ggcaattttt cccgcagcgt cgcgccatat gcccgtgttt tgttcttcag
     9961 acggcagcag gtcggttttg ttgtacacct tgatgcacgg aatatcgccg gcatggattt
    10021 cttgcagtac gttttccacg tcttcaatct gctgtccgct gttcggagcg gcggcatcga
    10081 cgacgtgcag cagcacatcg gcttgcgcgg tttcttccag cgtggcggaa aaggcggaaa
    10141 tcagtttgtg cggcagatcg ctgacgaatc cgacggtatc ggtcaggatg atgctgcatt
    10201 cgggactgat gtacagccgc cgcgccgtgg tgtcgagtgt ggcgaaaagc tggtctttcg
    10261 catatatgcc cgacttggtc agccggttga acaggctgga tttgccgaca ttggtatagc
    10321 cgaccagcgc aaacgttttg attgtgcccg attcgcggga cttgcggcgc agggcgcgct
    10381 gttttttgag gttggcaagc tgttttttca aggcgttgat tcgatgggcg atcaatcggc
    10441 ggtcggtttc cagtttggtt tcgcccggcc ctttcatgcc gataccgccg cgctggctct
    10501 gcagatggcc gtaaccgcgt atcaagcgtc ccgccaaatg gctcaattgc gccaactcga
    10561 cttgcagcct gccttcctgc gtgcgggcgc ggcgggcgaa aatcgccaaa atcaacccta
    10621 ccctgtccaa tacgcggcat tggaggattt tttccaaatt gcgttcctgc gtgggcgtaa
    10681 gttcgtggtt gaatacgacc aaatcgatgc cgtctgcggc aactgcttcc gacagctccg
    10741 ccgccttgcc cgtgccgaca aacagcgcgg tgtgcggacg gtcgcgtttg gcggtctcca
    10801 cgatgacggg attgccgccc gccgccttga ccagctcgac ggcttccgcc aatgccgtct
    10861 gaaagccgtt cagacgggcg gcgctgctgc ccgtaccgtc tttgtccaac attacgccca
    10921 ccagcatgac gcgttcgggt tgcgcttggg tactgccgtt gccgcctgtt ctgcctgtca
    10981 tgtattcaat cctgtaaata aagggttacg cctcgttccg tttctccttc cggtgcaagc
    11041 gtgatgcggc tgcccgccat tccgtcaacg ctgaagacga tgccgcccgc ctcgtgcctt
    11101 cctatggaca ggcggctgcc gggtcgctgc cggtaggtat aacgggtaca cgcttccaaa
    11161 caccagcgtc cgcgccagtg gatgaaatat ttttcgcctt ttctaaccgc aagtgtctcg
    11221 ccgccgttta cctcaaaata agggtaatcg ggttttcggg ttctaaactg ccatttcgcc
    11281 tgcgcgcgcc gtccgttgcg gacatagtcg aataccgccg tataaagcgt accgtattcc
    11341 aaaggcttga gcgggaaaag cgcgaattgg tacgcggtca gcctgccgtt ggggtcgttg
    11401 ccggcggtta aaaccctgac ggggcggatt tcgtttttac cctgatacag cttgaaactt
    11461 ttcatcgtaa ttttgcctgc cgcctcggaa aaatcaatgc tggcaggatt gcccgtgatt
    11521 tcatattccg gcacggggtc tggacgctcg ccgtggaaat aaggcagtgc gccgttgccg
    11581 acgggatagg ctgtatagag cagctcctgt gcgggcatgg cttcgtcggt gtacacgacc
    11641 gcaccgttat ggcaggcgtt gcggtaatat ttccgtcctg cttccggctg atttctgcct
    11701 tgggcgcaat gccgctcaaa cctgccgttg ccctgattga atacgagaac ggttttaccg
    11761 ttttcgcgca caaatgccgc tcctgcctca tccgtatggc ggtcaagtag ggaaaggcgg
    11821 tggtagattg cgctcattaa tccgtccact tggcgttgct gcgtgcggat gtcgctgtcg
    11881 gacgattcgg cggcttcctc ttccgtgctg atgttttcat gcacgccgtt gtagagatac
    11941 ccggcaaggc gtgtgcgttc ggtcagcttt tgtgcggtgt agtgcggatt gtcgggatgg
    12001 tgttcgccgt gtccgtcttc gggattgagc gtgagatagc gtgcgtgcct gcgggcggaa
    12061 ttttccaaaa ccggcgcgtg tgccagcttg tgcaaaccga tttgggcgcg gatgcggttg
    12121 aggtagtgca gcgcatcgcc gccgtccctg atttgcggtg cggacggata gacaagttcg
    12181 cccgcgggca gggattggtt ttgggtatga tagaaaacgc ctgccgccga acccaacagg
    12241 agcagccgaa taaaaaggga tttcataatg ccgtcctccc gacgcggcaa cggggtgttt
    12301 tatcaaaacg gcaaacttgc caatgcggtt tccgattgca gattgccaaa ccgacaaacc
    12361 tttccccgtg ccgatgccga acccgatgcc gtctgaacct tcagacggca tcgggtgttt
    12421 atttgtccac tcggatgggt gcaggttcgt attgtgtcga ttcgtccccg taatacagca
    12481 cgccgagttt gatggggatt ctgccctgcg atttgcggtg ggcgttggaa tcacgcaagg
    12541 aataggcgca gccgcaatat tcctgctggt agaagttttc gcgtttgcta atttcaatca
    12601 tacgcgcgct gccgccgcct ttgcgccagt tgaaatccca atacaccaca tcatcgtaag
    12661 gcgcggcggc gcggcggcca cagtcgttaa tctggttcat gtttttccaa cgggaaatgc
    12721 ccagcgagct ggtgaagacg gggaacccat gttcatgcgc gtattgcgcg gctttttcaa
    12781 aacgcatatc gaaacacatg gtgcagcgga tgccgcgttc cggctcaaac tccatgcctt
    12841 tggctttggc aaaccattct ttgcggtcgt tttcgtagtc gtcgtcttta tcgatgaaag
    12901 ggatgccgaa cttttccgca aagcgcacgt tttcctcttt tcggagcata tattctttgt
    12961 gcggatggat attgggattg taaaaataaa tggtgtaatc aatgccgctg gccagcatgg
    13021 cttccatcac ttcgccgctg cacggggcgc agcaggaatg cagcaagact tttttatgtc
    13081 cgccgggcgg gacgagtatg gggcggtcga tgtcggtaac gatgcgtgtt gtgtccatag
    13141 tttcaaatag atgttctgtt tggtgcaaac ggctatttta tcagagccgc cgcatgtgaa
    13201 acagagtgtc agggcatcaa cccgagctgc ctgaacgagc agacgctccg ggaggttacg
    13261 ataaaatggt cgagcagcga cacatcgacc agcgacatgg cctgtgccag ccgccttgtg
    13321 aacatgatgt cttcctgcga aggttcgggc gagccgcccg gatggttgtg cgcaataatc
    13381 aggctgtcgg catattcgtc caatgccagt ttgacgattt cgcggatgta aatcgtgttt
    13441 tccgcaaccg taccgcgcga cagctctctg accgcaatca gttggttttg gcggttcagc
    13501 agcagcgcga cgctgacttc gactttttcc tgccccaaat gaaagcgtaa ataatcggca
    13561 acggtatccg gatcggacag gacgatgctc tcctgcaatt cttccgccaa tatccgccgc
    13621 ccgatttccc tgactacggc aaactgtgtg aaacttgccg tccccatccc tttgtatgcc
    13681 gacagtttgc cgacctccgc gctcatcagc ctccccaaac tgccgaactc ctgcagcaaa
    13741 taacgcgcca aatcaaccgc actcattccg cgcgtgccga cgcgcagcag gattgccaaa
    13801 agttcggcat cactcaaagc cgccgccccg cgttccaaca gcttttccct gggcctttcc
    13861 ccctccggcc attgcttgat gctcatgttt tccctttttt aaatagtctg agatgccgtc
    13921 tggaacaaat gttcccacac gccaaatatc cgaaatgccg tctgaaccgg atttccgctt
    13981 cagacggcat ctgtatttca aaacagtctt acgccgtttc ttccaactcg attgaagccg
    14041 ccagaagcga caggcgtgcc attacgccgt aaacgtagag gcggttgtgt tcgttgtcca
    14101 cgtcgcagtc tttttcagag cgcggcatac ccagcgagtc ccattgttcg aatacgcgct
    14161 tgcaggcttc gggcgcttct tgggaattat cgccgttacc ggtaggaatg ctgttagaca
    14221 gcggaacaaa caccataccg ccggcgttga ggttttcgtc cgcaccgcgc ccttcgtgta
    14281 cgcggaaaaa gccgccgatg acgaagcggt ccatcatata cacgacgggt tcgcacaccg
    14341 cgccgtttaa ggtttcataa gtataaatcc cttcttggac aatcacttcg ctgacttcca
    14401 agccttcttt gactttcgcc attttattgc ggtttttacg gttcaatccg cgcacttcgt
    14461 cggcggattt gacgctcatc acgcccatgc cgtaagtgcc ggcatcggct ttgacgatga
    14521 cgaaaggttt gtcggtaatg cccgattcgt cgtatttggc ttgaattttc gccagcacac
    14581 gttctaccgc ttccgccaac gcgtcttcgc cttcacgccc ttggaagtcc aaaccgccga
    14641 ttttttcaaa ataagggtta atttgccatt cgtcgatgcc gattaacttg gcaaattcgg
    14701 cggtaacttg gttgtacgcg ccgaaatgat ttgttttgcg gcgcgtcgtc caaccgccgt
    14761 gcaacggcgg caaaacggtt tggctgatgc ctttgaggat gtcgggaatg ccggcagaca
    14821 aatcgttgtt caacaaaacc acgcaaggcg aaaagccgtc tgcaagatgg acgcggtcgc
    14881 gggtacgcaa taaaggttcc aacaggattt tgtcgcccaa tgcagtttca aattcggtcg
    14941 gttcggttac ttccggattc aggctgccca agcgcacttc ataccctgcc gaacgcaaaa
    15001 tctcgccgag ggcgtaaatg ttttgcaggt aaaacgtatt gcgcgtgtgg ttttcgggaa
    15061 taatcaatac ggatttcgcc gtttcgcagg cgcgttgcac cgcatcttgc gcggcaaccg
    15121 ccgccagcgg gataaagttg ggattcagat tattgaagcc gccggggaac aaattcatat
    15181 cgatagacga aattttgtaa ccggcattgc gtatatcgac cgaaccgtaa aacggcgggc
    15241 ggtgtacgct ccactgcgtg cggaaccacg cctcgatttt ggcgtgattg gacaggattt
    15301 ttgcctcaaa cgcctgaagt tgcgccgaat gttcgggcga catcaccggt aatttcatct
    15361 ttcgtctgcc tctgtgtgtt ttttgacaag atgcagatga taatgccttt gaaagaatga
    15421 cgacaagtat tctttcgtat cgaatcatgc tttagatata actgtttact gaaatggaca
    15481 atacgtctaa ttttttcgtt aaaattgttt gcaaaataac accggctcaa aaattagaca
    15541 aaatttgttg cgcggtataa agaatacgtc taaaatccgc ccaatccgca ttaccattta
    15601 tccaaaagaa caacatcatg acagcacaaa ccctctacga caaactttgg aacagccacg
    15661 tcgtccgcga agaagaagac ggcaccgtcc tgctctacat cgaccgccat ttggtgcacg
    15721 aagttaccag ccctcaggca tttgaaggct tgaaaatggc ggggcgcaag ctgtggcgca
    15781 tcgacagcgt cgtctccacc gccgaccaca acaccccgac cggcgattgg gacaaaggca
    15841 tccaagaccc gatttccaag ctgcaagtcg atactttgga caaaaacatt aaagagtttg
    15901 gcgcactcgc ctattttccg tttatggaca aaggtcaggg catcgtacac gttatgggcc
    15961 ccgaacaagg cgcgaccctg cccggtatga ccgtcgtctg cggcgactcg cacacttcca
    16021 cccacggcgc attcggcgca ctggcacacg gcatcggcac ttccgaagtc gagcacacca
    16081 tggcgaccca atgtattacc gcgaaaaaat ccaaatccat gctgattgcc gttgacggca
    16141 aattaaaagc gggcgttacc gccaaagacg tggcgctcta catcatcggg caaatcggca
    16201 cggcaggcgg tacaggctac gccatcgagt ttggcggcga agccatccgc agcctttcta
    16261 tggaaagccg catgacttta tgcaatatgg cgattgaggc aggcgcgcgc tcaggcatgg
    16321 ttgccgtcga ccaaaccacc atcgactacg taaaagataa acccttcgca cccgaaggcg
    16381 aagcgtggga caaagccgtc gagtactggc gtacgctggt gtctgacgaa ggtgcggtat
    16441 tcgacaaaga ataccgtttc aacgccgaag acatcgaacc gcaagtcact tggggtacct
    16501 cgcctgaaat ggttttagac atcagcagca aagtgccgaa tcctgccgaa gaaaccgatc
    16561 cggtcaaacg cagcggtatg gaacgcgccc ttgaatacat gggcttggaa gccggtacgc
    16621 cattaaacga aatccccgtc gacatcgtat tcatcggctc ttgcaccaac agccgcatcg
    16681 aagacttgcg cgaagccgcc gccatcgcca aagaccgcaa aaaagccgcc aacgtacagc
    16741 gcgtgttaat cgtccccggc tccggtttgg ttaaagaaca agccgaaaaa gaaggcttgg
    16801 acaaaatttt catcgaagcc ggttttgaat ggcgcgaacc gggctgttcg atgtgtctcg
    16861 ccatgaacgc cgaccgcctg accccggggc aacgctgcgc ctccacctcc aaccgcaatt
    16921 ttgaaggccg tcaaggcaac ggcggacgta cccacctcgt cagccccgct atggcagccg
    16981 ccgccgccgt taccggccgc tttaccgaca tccgcatgat ggcgtaagta ttttcaggcg
    17041 gtctttaaga atttgacgcg gccgtctgaa atatgtcccg taaggcagaa acacctttaa
    17101 tattcaaacc aaggagttta accatgaaca aacttttcat taccgccctg tccgccctcg
    17161 ccttgtccgc ctgcgccggc acttgggagg gcgcgaaaca agacaccgcc cgcaaccttg
    17221 acaaaacaca ggccgccgcc gaacgcgccg ccgaacaaac aggcaacgcc gtcgaaaaag
    17281 gctgggacaa aaccaaagaa gccgtcaaaa aaggcggcaa tgccgtcgga cgcagcattt
    17341 cccatctcgg cggaaaaatc gaaaacgcca ccgaataacc gattcgcgat gccgtctgaa
    17401 accgcttcag acggcatcgt cagcacaaga cgcaaaccca tgaaagcctt taccaaaatt
    17461 accgccatcg tcgccccgct cgaccgcagc aacgtcgata ccgacgccat catccccaaa
    17521 caatttttaa aatccatcaa acgcagcggc ttcggcccca atgcctttga cgaatggcgt
    17581 tacctcgacc acggcgaacc gggcatggac aacagcaaac gcccgttgaa ccctgatttc
    17641 tcgctgaacc agccgcgtta ccaaggcgcg caaatcctgt tgacacgtaa aaacttcggt
    17701 tgcggctctt cacgcgaaca cgccccttgg gcattggacg actacggctt ccgcgccgtc
    17761 atcgccccca gcttcgccga catcttcttc aacaactgct acaaaaacgg ccttttacct
    17821 atcgtgttga ccgaagaaca ggttgaccgg cttttcaaag aagttgaagc caacgaaggc
    17881 tatcagctct ccatcgacct tgccgaacaa accctggcca cccctggcgg cgaaacattc
    17941 acattcgaca ttaccgaaca ccgcaaacac tgcctcttaa acggcttgga cgaaatcgga
    18001 ctgaccctgc aacatgccga tgaaattcac gcctttgaag aaaaacgccg ccaaagccag
    18061 ccttggctgt ttaacggtta aaacctatgc cgtctgaagg ccgttcagac ggcattcctg
    18121 ataacatata attgttgcgg ctaatgtaaa cagaggggcg ataaattgct ttcatctttt
    18181 aagcgggctt agcgacactc taaattaatg caataatgca actctccatt tcaaataaat
    18241 ttttagattt ttaatatgca acaaattaaa tttattgact tattttccgg aatgagtggc
    18301 atcaggaaag gattcgaaca agcctgtcgg aaacagtcgg ttgcttgcga atgtgttttt
    18361 acttcagaaa tcaaaccggc agctttggaa gtattgaagc aaaactaccc tgatgaagtg
    18421 ccgtatggag atataacgaa aattgaaaca ggggatattc ccgattttga catcctgttg
    18481 gcaggcttcc cttgtcaggc tttttctttc gccggaaaaa gattgggctt tgaagataca
    18541 cggggaacgc ttttctttga tgtggcaagg attttaaagg caaaaaaacc aaaaggtttt
    18601 attttggaaa atgtggaagg attggtgaca cacgatagaa aagatccgac acaaaaaata
    18661 gggcgcaccc tgaccgttat tttggaaacc ttggaagcat tgggctacta tgtttcttgg
    18721 aaagttttaa atgcaaaaga tttcggcatt ccccaaaaca ggaagcgcat ttatctgaca
    18781 ggcagtttga aatccaaacc cgacttatct ttcgaaacaa gcccaagtcc gaaattaaaa
    18841 aatattttgg aatcgggact gcctactgaa agcagccctt tcatcaagaa attgctaaaa
    18901 aaatttcccc cgtccgaact gtacggaaaa tcagtaaaag acaaacgggg agggaaaaac
    18961 aatattcaca gttgggatat tgaattaaaa ggcgcagtaa ccgaagaaga gaagcaattg
    19021 ttaaatatcc ttctaaaaga acggaggaaa aaaaatgggc ttcagaaatc ggcatagatt
    19081 ggatggatgg gatgcctttg acaaaagcgc aaatttcaac tttctataaa caccccaatc
    19141 tccaaaatat tttggacagc ctgacagata aaggctattt ggttttagag catccgaaac
    19201 aaaaaattgg cgggcaaaga atcaaagatg aatccctgcc caaaggctac aatattgttt
    19261 caggcaaaaa atcttttgaa atcaataaaa tattagatcc aaacgatgtt gcgccaacct
    19321 tggttgcaat ggatatggag caccttttcg tcgttgacaa cggcggtttg cgtacactta
    19381 ccggaaaaga agggttgcgc ttattcggct atccggacga ttattcgttt gatattccca
    19441 aaaaagacag atgcgattta ttgggtaata ccgttgtcgt ccctgtgatt aaggcggtat
    19501 ctgaaagact tctgcatact ttataaaccg acagggataa aatgataaaa cttactgcac
    19561 aacaaatatt tgataagttg ctggatgaag aaaaaatctt atcggccaat ggtcaaatta
    19621 gatttttctt aggcgatgtg gatattatcg tcaaacaaaa agatgttgtc ggcaacatca
    19681 ttcaggaatg gctcggcgga tgattgagaa aaagggaaat tgaatttgat gtttcaacca
    19741 atacccaaat gcctcccgat ttctttttaa ataaaaaaga ccgcagcaga gaattgttgg
    19801 aagtaaaggc gttcaaccga aatgccggcc cgggttttga tattgcagat tttaaaatgt
    19861 attctgatga aatcattcat aagccctata tgctggatgt agactattta atattcggtt
    19921 acgatatgga cgacaacggc aatgtaacca tcaaggattt atggcttaaa aaagtatggc
    19981 aaattacgag aagcatggat gggtgggcaa ttaatcttca agtcaaaaaa ggcgtggtgc
    20041 ataaaatccg cccgggtgtt tggtacagca taaataaaaa gaatatgcct atgtttgaat
    20101 gcttggaaga ttttgtttcc gcaattgaag aaaccgttta tcaaaacccg gcaacacggc
    20161 ataacgcatc cttatggaaa aagaaatttg aggaagccta taaaaaacac tacaaccgat
    20221 cgatttccat acctcgttgg cacgaaattg cacacaaata caaaaagaaa taacccttca
    20281 accatcaacc cataaggaaa cttgaaatga ccaaacatat cgccatcctc caaggtgacg
    20341 gcatcggccc agaaatcgtc gccgaaaccg tccgcgtact cgacaaactc atcgcccaag
    20401 gcttggacgc cagctacgaa tacgccccat taggcggcga agcctacgac gaatacggcc
    20461 atccctatcc cgaatttacg caaaacctct gccgcaaagc cgatgccgtc ctgcttggtg
    20521 cagtcggttc tcctcaatac gacaacctcg accgtccgtt gcgccctgag cgcggcctgt
    20581 tggcaatccg taaggatttg aacctgtttg ccaatttgcg tcctgctgtt ttatatcccg
    20641 aattagccaa cgcctccacg ctgaagcctg aaatcgttgc cggtttgaat attttgattg
    20701 tgcgcgaact caccggcgac atctatttcg gcgaaccgcg cggcatccgc gttctggaaa
    20761 acggcgaacg cgaaggctac aacaccatga aatacagcga aagcgaaatc cgccgcatcg
    20821 cccacgtcgc tttccaatcc gcccaaaaac gcagcaaaaa agtctgctcc gtaggcaaag
    20881 ccaacgtttt ggaaaccacc gaactgtggc gcgaaatctt tgaagaaatc ggcaaacaat
    20941 accccgatgt cgaactctcc cacatgtatg tagacaacgc cgccatgcag ctcgtgcgtg
    21001 cgcccaaaca attcgacgtc attgccaccg gcaacatctt cggcgacatt ctctccgacg
    21061 aagcctccat gctgaccggc tccatcggta tgctgccttc cgcttctttg gacgaaaacg
    21121 gcaaaggcct gtacgaaccg tcccacggct ctgcccccga cattgccgga caaaacaaag
    21181 ccaacccgct ggccaccatc ctctcgctcg caatgttgct gcgttacagc ctgaacgacg
    21241 aagcgcgcgc gcaacaagtt gaaaacgccg tccaaaaagt gctgcaacaa ggcttgcgta
    21301 ccagcgacat ttacgaagaa ggcacaaaac tcgtttcctg ctccgaaatg ggcgatgcgg
    21361 tactcgccgc cttgtaaaaa aacaaagcgc ggatcacacc gcgctttttc atccgccctt
    21421 ttccgcccgc cccgttcgtc aaccgcctgc aaacccaccg tttaccggca ggaaatgcca
    21481 taaatccctg cctatgttag gataaacgcc tttaccggcc cacacaaagg attatcatca
    21541 tgaaaaaaat catcttcgcc gcactcgcag ccgccgccat cagtactgcc tccgccgcca
    21601 cctacaaagt ggacgaatat cacgccaacg cccgtttcgc catcgaccat ttcaacacca
    21661 gcaccaacgt cggcggtttt tacggtctga ccggttccgt cgagttcgac caagcaaaac
    21721 gcgacggtaa aatcgacatc accatcccca ttgccaacct gcaaagcggt tcgcaacact
    21781 ttaccgacca cctgaaatca gccgacatct tcgatgccgc ccaatatccg gacatccgct
    21841 ttgtttccac caaattcaac ttcaacggca aaaaactggt ttccgttgac ggcaacctga
    21901 ccatgcacgg caaaaccgcc cccgtcaaac tcaaagccga aaaattcaac tgctaccaaa
    21961 gcccgatgga gaaaaccgaa gtttgtggcg gcgacttcag caccaccatc gaccgcacca
    22021 aatggggcat ggactacctc gttaacgttg gtatgaccaa aagcgtccgc atcgacatcc
    22081 aaatcgaggc agccaaacaa taaatcttga tgcgaatcag cacaaatgcc gtctgaacgt
    22141 ccttcaaacg gcatttgtgc cgtcttcatc aaaccgcccc gccaacggta agccgatatg
    22201 gcggagcaca atccgccgaa agatatttca gcggcaggca gggcttgccg gaaagtccgg
    22261 aaa
//
LOCUS       DAWKJW010000012        22109 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.012, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000012 DAWKJW010000000
VERSION     DAWKJW010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22109)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22109)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22109
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.012"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            153..1058
                     /locus_tag="WJJ54_000386"
     CDS             153..1058
                     /locus_tag="WJJ54_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ7341295.1"
                     /translation="MGKGGDIVVGNGKKYAAPLLVLGCVVFGLGSLIVRSVPVGSYAI
                     AFWRLLISVFVFWFLARFFGQKFPKNRKTVRYALTAGVFLAFDLALWHESIHAVGPGI
                     STLLNSLQIFFLSAIGVFFFGERLSGLKKAGLISAVAGVAMIAGAEFGYNGNAVWGFV
                     SGLVSGLMLALSMVFVRKTHEVEPVALFPSMMILSLGGAVSLVVPALLMDGGALYPTT
                     WKDAGLVLVYGVVMQCFAWAMVAYAIPLLSLSLTGLLLLSEPVAALFIDYFGLGKPIE
                     GVQWAGVALTLSAIYLGSLKQQSEP"
     gene            1104..1253
                     /locus_tag="WJJ54_000387"
     CDS             1104..1253
                     /locus_tag="WJJ54_000387"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341296.1"
                     /translation="MNWQAVKTGKTKHAGNGAERKMPSEALSDGIGAGRIKKAASAGM
                     AMQLK"
     gene            complement(1472..2491)
                     /gene="lepB"
                     /locus_tag="WJJ54_000388"
     CDS             complement(1472..2491)
                     /gene="lepB"
                     /locus_tag="WJJ54_000388"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEZ7341297.1"
                     /translation="MNTMLMSGAAAALLAGIILYFKSDKKRQENGEWSSGLEYAYILT
                     AVGVFAALSLFMSFTAVFLIFVVLCGTAWGVYKYRLKTHPEISESSHFGDYFGSFFPT
                     VLVLFLIRSFIAEPFQIPSSSMRPGLIKGDFILVGKFSYGLRVPVLNNVFIPTGKIER
                     GDVVVFNYPLQPEMTYIKRIVGIPGDVVEYRNKVLTVNGKPASDIPDGTYRYPDDTDP
                     SEIHNTDMFRSGLDGKSFNILKKEGQPAVSLPVLGKYTSDIMSENGYSIEQSGLEHCQ
                     YADDGSGFVCKVPEGRYFAMGDNRDNSADSRYWGFVDDKLVVGKAMFILMNFGDFGRA
                     GTAIR"
     gene            complement(2634..4427)
                     /gene="lepA"
                     /locus_tag="WJJ54_000389"
     CDS             complement(2634..4427)
                     /gene="lepA"
                     /locus_tag="WJJ54_000389"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEZ7341298.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSM
                     DIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQ
                     CSAKSGIGVEDVLEEIVAKIPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIK
                     LKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTL
                     VANPATEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKNGEKIEVENPSKLPD
                     IGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEV
                     VMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRQSAVHRG
                     RELASKMRELIPRQMFDIAVQAAIGSQIIARENVKALRKNVLAKCYGGDITRKKKLLE
                     KQKAGKRRMKQVGNVEIPQSAFLAILQVSDK"
     gene            complement(4570..5271)
                     /locus_tag="WJJ54_000390"
     CDS             complement(4570..5271)
                     /locus_tag="WJJ54_000390"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HEZ7341299.1"
                     /translation="MSLKTVAVIGAMEQEIELLREMMENVKAVSFGKFTAYEGELAGK
                     RMVLALSGIGKVNAAVATAWIIREFAADCVINTGSAGGLGKGLKVGDVVIGTETAHHD
                     VDVTAFGYVWGQVPQLPAVFVSDDLLVGKAKRAARTFEGAAVEQGLIVSGDRFVHSSE
                     GVAEIRKHFPEVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKADISFDEFLKTA
                     AASSAKMVAEIVKSL"
     gene            5457..6569
                     /locus_tag="WJJ54_000391"
     CDS             5457..6569
                     /locus_tag="WJJ54_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEZ7341300.1"
                     /translation="MTAKEELFAWLRHMNQNKGSDLFVTTHFPPAMKLDGKITRITDE
                     PLTAEKCMEIAFSIMSAKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGATALVFRA
                     ITSKIPKFESLNLPPVLKDVALKKRGLVIFVGGTGSGKSTSLASLIDYRNENSFGHII
                     TIEDPIEFVHEHKNCIITQREVGVDTENWMAALKNTLRQAPDVILIGEIRDRETMDYA
                     IAFAETGHLCMATLHANSTNQALDRIINFFPEERREQLLTDLSLNLQAFISQRLVPRD
                     GGKGRVAAVEVLLNSPLISELIHNGNIHEIKEVMKKSTTLGMQTFDQHLYQLYEKGDI
                     SLQEALKNADSAHDLRLAVQLRSRRAQSSSPDLELL"
     gene            6603..7580
                     /locus_tag="WJJ54_000392"
     CDS             6603..7580
                     /locus_tag="WJJ54_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEZ7341301.1"
                     /translation="MIYPWHNEQWRQIAEHWERRPNAWLFAGKKDTGKTTFARFAAKA
                     LLCETPAPGCKPCGECMSCHLFGQGSHPDFYEITPLSDEPENGRKLLQIKIDAVREII
                     DNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPPQVVFLLVSHAADKVLPTI
                     KSRCRKMVLPAPSHEEALAYLRERGVAEPEERLAFHSGAPLFDEADGVRALRIKLLDI
                     LAEPRLLKILDYAALFDKEKLPLAVFVGWMQKWLVDLGLCLQHMKPVYYPAYEDRLLQ
                     TVSGFRPRNVFAAEDMLKQLAPYGFHTLNVKMQIEHLLINYLELKKENG"
     gene            7584..7934
                     /locus_tag="WJJ54_000393"
     CDS             7584..7934
                     /locus_tag="WJJ54_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilZ"
                     /protein_id="HEZ7341302.1"
                     /translation="MSDGQNIPAKMMSLQLKDMNLLYSSYMPFLEHGGLFVQTNDVFS
                     IGDDILLAVEILNFPKLFLPTKVAWINPARTSSKPKGVGLAFTKHENCLKVKDQIEVE
                     LGNTIGGSRPTFTM"
     gene            7939..8718
                     /locus_tag="WJJ54_000394"
     CDS             7939..8718
                     /locus_tag="WJJ54_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEZ7341303.1"
                     /translation="MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESF
                     AEVSAIAEVYEHIYCTIGVHPDSKEAEEFSIAEMVAAAASPKVVGIGETGLDYYWCKG
                     DLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLSILKECRVNSGVIHCFSEDIGFA
                     RAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPA
                     FVRHTAEHIAKLRNQTLEQVAAYTTENFYRLFKKVPDMRTV"
     gene            8744..8959
                     /locus_tag="WJJ54_000395"
     CDS             8744..8959
                     /locus_tag="WJJ54_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HEZ7341304.1"
                     /translation="MEAIHPYACPRCCRLPANTFRTGMANSASKFCIAKGGRREVKKD
                     ESGGGYALCHLPDSRIVEEWEYFRSQH"
     gene            9060..9371
                     /gene="grxD"
                     /locus_tag="WJJ54_000396"
     CDS             9060..9371
                     /gene="grxD"
                     /locus_tag="WJJ54_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HEZ7341305.1"
                     /translation="MASIHDQIKEVVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAG
                     CTDYVTVNVLENPEVRQGIKEYSDWPTIPQLYVNGEFVGGSDILMEMYEAGELQELLK
                     A"
     gene            9477..10103
                     /gene="upp"
                     /locus_tag="WJJ54_000397"
     CDS             9477..10103
                     /gene="upp"
                     /locus_tag="WJJ54_000397"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEZ7341306.1"
                     /translation="MNVNVINHPLVRHKLTLMREADCSTYKFRTLAIELARLMAYEAS
                     RDFEIEKYLIDGWCGQIEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQ
                     RDEETLKPVSYFEKFVDSMDERPALIIDPMLATGGSMVATIDLLKAKGCKNIKALVLV
                     AAPEGVKAVNDAHPDVTIYTAALDSHLNENGYIIPGLGDAGDKIFGTR"
     gene            10126..10446
                     /locus_tag="WJJ54_000398"
     CDS             10126..10446
                     /locus_tag="WJJ54_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HEZ7341307.1"
                     /translation="MNFQDYLATFSSIDHLGGLDVQDADGKTVHHIPAVQGKLGSLKL
                     YNALAERFDGKLDKEAAEQGLIWFAEHVADARAHPGKHPNIDLLEKVVQSGETLLLKP
                     LAAQ"
     gene            10697..11119
                     /locus_tag="WJJ54_000399"
     CDS             10697..11119
                     /locus_tag="WJJ54_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341308.1"
                     /translation="MKKMFLSAVLLLSAATRTVWADTVFSCKTDNNKYIEVQKINRNL
                     YEYSFGSAAKKEIAIRNSKADLLGRSDRWQGMGSGRRATMKFQNGEFMYTVWTGFDSV
                     THTESSGVVVERRGKEVARVGCTPQTAQANFNDADFSR"
     gene            11137..11898
                     /locus_tag="WJJ54_000400"
     CDS             11137..11898
                     /locus_tag="WJJ54_000400"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEZ7341309.1"
                     /translation="METVKPIMLIVRPSGRAKDDVETCRRAGWQAEVLSPIEIEADAA
                     GLELLSEQYARADAVFWVSPTAVETAVPYLNLSDGIKMHISVGQGSRRALERCLGRTV
                     IAPEDGNDSEAVLRLTVWNSLPEGARVLFVRGHGGRDFLMNALQEKGFRTEVAEVYFR
                     RHKPLNFQNFQTENIAAAYITSTELVRLLFGQLPPQFSRFFKSLLYFTHHPRIAEALK
                     REGVCSVETVPTLEAALSHSSISVSDGMVFPGTSN"
     gene            11913..13247
                     /locus_tag="WJJ54_000401"
     CDS             11913..13247
                     /locus_tag="WJJ54_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEZ7341310.1"
                     /translation="MGEPENKSSEPVREIQASKEMPSETSSPRKENETEVHIPAAPFI
                     VKQSGSNALAVCALVLAALGLGTSGFLFVQGQNVLKNQELAFNQKIDKAALGESENAA
                     LLKDNLNRQAAIQSELDRLDSGVKANGEQILMTQKAYRELTKGRADWLVDETDTILNL
                     AAQQLVLTGNIQTAVGVLEHIDSRLSRFDQAELLPIKQAVSSDLAELKNRPYVDISGT
                     ALRLDRLETAVFGLPLILDGVLKPGVQVKNEAASASWWQNVWEKSLGTLKGLVEIRRL
                     ENNDAMLISPEQAYFVRENLRLRLLDVRTALMQRNSEVYQGDLNNAEAAVRQYFDAKS
                     PATQSWLKELAELKALDVRMTADDGLKNSLNAVRAYRDGTRMTAAENQEAEQAASEPA
                     NENTASEPAAASDVKTIEAPSLPSERKPEQPAKKQPVPEKAGRSPSAKGERA"
     gene            13244..14461
                     /locus_tag="WJJ54_000402"
     CDS             13244..14461
                     /locus_tag="WJJ54_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HEZ7341311.1"
                     /translation="MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAF
                     VLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEK
                     AELEASRVLGNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYL
                     LLAESALNRRDYEAAEANLYAAAKMNANLTRLVRLQLRYAFDRGDALQVLAKTEKLSK
                     AGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLG
                     LYADAVKWVKQHYPHNRRPELLEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLL
                     MYLGRLAYGRKLWGKAKGYLEASIALKPSISARLVLAKVFDETGEPQKAEAQRNLVLA
                     SVAEENRPSAETH"
     gene            14536..15600
                     /locus_tag="WJJ54_000403"
     CDS             14536..15600
                     /locus_tag="WJJ54_000403"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEZ7341312.1"
                     /translation="MTLLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAG
                     SFLDLCKNTELATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRA
                     LQHEDDIAKLHVPDMEKLQYVFDAVSSIRKALDGRVPLIGFSGSPFTLACYMVEGGGS
                     KEFRTIKTMMYSRPDLLHKILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAF
                     KEFSLKYIRQIVAGLKRESEGRRVPVIVFAKGGGLWLESMAEIGADALGLDWTCNIGE
                     ARRRVGKQVALQGNFDPFALFGTPESIRTEAARILADYGHGSGHVFNLGHGINQHADP
                     EHAKILVDTVHELSRQYHGG"
     gene            15778..17157
                     /gene="radA"
                     /locus_tag="WJJ54_000404"
     CDS             15778..17157
                     /gene="radA"
                     /locus_tag="WJJ54_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEZ7341313.1"
                     /translation="MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPK
                     NARFQSWAADTSTVQSLSAVTATEVPRNPTGMGELDRVLGGGLVDGAVILLGGDPGIG
                     KSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRAQRLELPTDGVNLLAEIRMEAIQAA
                     LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTK
                     DGAIAGPRVLEHMVDTVLYFEGDQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVS
                     NPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFTPKRLTVGLEQNRLA
                     MLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPMPEKTVVF
                     GEIGLSGEVRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIYGVSSLQEA
                     IDICRDSRE"
     gene            complement(17432..17911)
                     /locus_tag="WJJ54_000405"
     CDS             complement(17432..17911)
                     /locus_tag="WJJ54_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HEZ7341314.1"
                     /translation="MKHILPLIAASALCISTASAHPASEPQTQNETAMTTHTLTSKYS
                     FDETVSRLETAIKSKGMDIFAVIDHQEAAHRNGLTMQPAKVIVFGTPKAGTPLMVKDP
                     AFALQLPLRVLVTETDGKVRAAYTDTRALIAGSRIGFDEVANTLANAEKLIQKTVGE"
     gene            complement(18043..18402)
                     /locus_tag="WJJ54_000406"
     CDS             complement(18043..18402)
                     /locus_tag="WJJ54_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEZ7341315.1"
                     /translation="MNIKHLITAALIASAAFAAQAAPQKPLSAAQTAQHPAVWIDVRS
                     EQEFSEGHLHNAVNIPVDQIVRRIHEAAPDKDTPVNLYCRSGRRAKAALQELKKAGYT
                     NVANHGGYEDLLKKGMK"
     gene            complement(18441..22055)
                     /gene="recB"
                     /locus_tag="WJJ54_000407"
     CDS             complement(18441..22055)
                     /gene="recB"
                     /locus_tag="WJJ54_000407"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HEZ7341316.1"
                     /translation="MSAPIQAFDPLTVPISGTNLIEASAGTGKTYGIAALFTRLIVLE
                     QKNVERVLVVTFTKAATAELKTRLRARLDDVLQVLESKEIAKLGDDTLSDGIAAYCAE
                     HHKGDTFLPALLKQALQKEGRTRLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLC
                     QAPFDVELTEEDGDRLLVPAQDFWRERVSNDPVLAALAFKRKAVPQTVLAQIRAYLSR
                     PYLNFRRPQTDLPQARDAALASWQNICGNLAELKETFWRIHPLLNGNSYRKNSFAELF
                     DALEQKALSPDLPFLEAKLHERLLKLASDKLEAGLKKGKTPDAAVFAELQKLADFRRD
                     LDALEEAEEATIIRLQLDLIGYLNRSLAEMKKSRRERGFDDLLLDVHTALTDNPHAET
                     LARAVAENWETALIDEFQDTDPLQYEIFQKIFIAQNRPLFLVGDPKQAIYSFRGADIY
                     AYLQAAEDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESR
                     LSPERPAVQVRWLHENDNEKANKDVLRRRAADYCADEIAHALNEAAECRLNFKGCPLQ
                     SGDIAVLVRTHNEAVMVSAALKKRQVQSVLLSRESVFASPEAAALSALIGFWLEPRRA
                     GTLRFVLTSGIFGYDAQQLHDFNQNESEILHWAESARTALDNWNQYGIFAAMQQFSQT
                     HGIETRLLSRNNGRSLTNYFQLLELLAAEDAQNRNPAALHKWLRDQISLAGNNSGDNR
                     AIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQSANRTELLAK
                     AQLSEDEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSSDTADNPLAYLIEGLPQ
                     DSRETVRQTYDREKDGIAMLKRNWRRLTDNAPAGTDFAFTEDAPPPAAYRGNAGQTAE
                     FAANSIPERRFRFVRHTSFTALSRHTQTPDGGEEDACPSLDAAETSVPAMPSETPTAS
                     DGISIHDFPKGTQAGLCLHEILEDFKFGQAAAGQETLIADKLKKYGFEEIWLPAVAEM
                     AEACQKTPLTGAYCLSDIPPECRCPEMGFTLHTEDFGLKRLRDWFARDDIRLPEVCRA
                     AAETLDFHTVNGFLNGFIDMVCQDPDGNICVIDYKSNHLGADASAYTQQAMDEAVAHH
                     HYYLQALIYAVAAARYFKLRGQPPAAVSVRYLFLRGLDGKGGGVWRWDIDAAALEQIK
                     "
BASE COUNT         5001 a         5737 c         6250 g         5121 t
ORIGIN      
        1 gggttttatc tggcaggacg gttttttgcc ccaacggaaa atagtcggcc tgcccgtaaa
       61 atcagccgtt tgtccgggtg cagccggggc tttgggcttc agacggcata ttttcggaat
      121 ggcggcattc ttgccgtcgg cgcggcagcc gtatggggaa gggaggggat attgtggtcg
      181 gtaacggcaa aaaatatgcc gcaccattgc tggtgctggg ttgcgtggtg ttcggtctgg
      241 gcagtctgat tgtcagatcc gtccccgtcg gttcgtatgc aatcgcattt tggcggttgc
      301 tgatttcggt gttcgtattt tggtttttag cacggttttt cgggcaaaaa ttcccaaaaa
      361 acaggaaaac cgtccgatat gccctgacgg cgggcgtgtt tctcgctttc gatttggcgt
      421 tgtggcacga aagcatacac gcggtcgggc cgggtatttc caccctgctc aacagcctgc
      481 aaatcttttt cttgtcggca atcggtgttt tctttttcgg cgagcgtttg agcgggctga
      541 aaaaggcagg cttaatatcg gcagttgccg gtgtggcgat gattgccggt gcggaattcg
      601 gctacaacgg taatgcggtt tggggattcg tcagcggttt ggtgtccggg ctgatgcttg
      661 ccctgtcgat ggtgttcgtc cgcaagactc atgaagtcga gccggtggcg cttttccctt
      721 caatgatgat tttgagttta ggcggcgcgg tatcgttggt tgttccggca ttgctgatgg
      781 acggcggcgc gctttatccg acgacttgga aagatgcggg tttggtgctt gtgtacggcg
      841 tggtgatgca gtgcttcgcg tgggcgatgg ttgcctatgc gattccgctg ctttcgctgt
      901 cgctgacggg gctgctgctt ttgtccgaac cggttgccgc cctgttcatc gattatttcg
      961 gattgggcaa accgattgaa ggcgtgcagt gggcaggggt ggcgctgacg ctttcggcaa
     1021 tttatctcgg ttcgctgaaa cagcagtccg agccttgact ccgtccggca tcagattttc
     1081 tgccgtggca aacctgcgta cgattgaact ggcaggcagt caaaaccggc aagaccaaac
     1141 acgccggcaa cggcgcggag cggaaaatgc cgtctgaagc cctttcagac ggcatcgggg
     1201 cgggcagaat caaaaaagcc gcctccgctg gaatggcaat gcaactaaaa taatgtccgt
     1261 atttccatat gccgcccaca ccgtcagtcg gacgaaatgc cctttattca atgggatggg
     1321 tttccacaca aacggaaata tagtggatta aatttaatcc actatattat ccccgaggct
     1381 gccggcaggg aaacaaggcg tttgatgata aaaatgccgt ctgaaacagg gttcggatgg
     1441 catttttgat gttccggcgt aattttccgg cctaacggat tgccgtaccg gccctgccga
     1501 aatcgccgaa gttcatcaaa atgaacattg ccttgccgac aaccagcttg tcatccacaa
     1561 atccccagta gcgcgaatcg gcactgttgt cgcggttgtc gcccatagcg aaatagcgtc
     1621 cttcgggaac tttgcacacg aaaccgctgc cgtcgtcggc atattggcag tgttccaaac
     1681 cgctttgctc tatggaatat ccgttttcag acataatatc ggaggtatat ttgcccaata
     1741 cgggcaggga aacggcaggc tgtccttctt ttttcagaat attgaaggat ttgccgtcca
     1801 aaccgctgcg gaacatatcc gtattgtgga tttcggaagg gtcggtgtcg tcgggataac
     1861 ggtatgtgcc gtcaggaata tcggaagcag gttttccgtt taccgtcaaa actttattcc
     1921 gatattcgac cacatcgccc ggaatgccga caatacgctt gatgtaggtc atctccggtt
     1981 gcaaaggata attaaaaacg accacatcgc cccgttcgat tttgcccgtg gggatgaata
     2041 cattgtttaa aacgggtacg cgcaggccgt aggaaaattt gccgaccaaa atgaaatcgc
     2101 ccttgatcag gcccgggcgc atcgagctgg acgggatttg gaacggttcg gcgataaacg
     2161 accggatgag gaacaatacc aaaacggtag ggaagaaact gccgaaataa tcgccgaagt
     2221 ggctgctttc cgagatttcg ggatgagtct tcaggcggta tttatatacc ccccaagccg
     2281 taccgcacaa tacaacgaaa atcaggaaaa cggcggtaaa gctcataaac agggacaaag
     2341 cggcaaacac gccgaccgct gtcaggatat aggcgtattc aaggccggaa ctccattccc
     2401 cgttttcctg ccgcttcttg tcgcttttga aataaaggat gatgccggca agcagcgcgg
     2461 cagccgcgcc cgacattagc attgtgttca ttgttgttcc tcaacggtta aaaacccgcc
     2521 cggccgtgca actgttttaa ggcggcaaat tgcaaaattt gtttgcgggc gcgtgcccct
     2581 gaaatcaggg cggtttgagg ggtgttcccg acgcgccgcc ctgtgtgcca gagttatttg
     2641 tcgctcacct gcaaaatcgc caagaacgcg ctttgcggaa tttccacatt gcccacttgt
     2701 ttcatacggc gtttacctgc cttttgtttt tcaagcagtt ttttcttacg cgtaatatcg
     2761 ccgccgtaac atttcgccaa gacgttttta cgcagtgctt tgacgttttc gcgggcgata
     2821 atctggctgc cgatggcggc ttggacggca atgtcgaaca tttggcgcgg aatcagctcg
     2881 cgcattttcg atgccagctc gcggcctcgg tgaaccgcgc tttgacggtg cacaatcagg
     2941 cttaaggcat cgactttttc gccgttgacc ataatatcca gcttaatcaa atcagacggt
     3001 tggaactctt tgaaatggta gtccaacgaa gcataaccgc gcgaagtgga tttgagtttg
     3061 tcgaagaagt ccatgacgac ttcgttcatc ggcaaatcat aagtcagcat gacttggcgg
     3121 cccatatatt gcatattgac ctgaacgccg cgcttttggt tacacaaagt catgacgttg
     3181 ccgacgtatt cctgcggcac gaggatggtc gcggtaataa tcggctcgag aatggtttcg
     3241 atgctgccga tgtcgggcag tttggacggg ttttcaactt cgattttctc accgtttttc
     3301 aacacgactt cgtaaaccac cgtcggcgcg gtggtaatca agtccatgtc gaactcgcgc
     3361 tccaaacgtt cctgcacgat ttccaagtgc agcagaccca agaagccgca acggaagccg
     3421 aagcccaatg cctgggaaac ttcaggctcg aatttcaacg aagcgtcgtt aagctgcaat
     3481 ttttccaaag cgtcgcgcaa ggcttcgtag tcgtggcttt ccacgggata aagtccggcg
     3541 aatacttggc tttgtacttc ttggaagccg ggcagcggct cagtggcagg gttggcaacc
     3601 agtgtaaccg tatcgccaac tttcgcctga cccaattctt ttacgccagt aatcaaaaag
     3661 cccacttcgc cggctttgag ttcttgtttc tgaaccgatt tcggtgtgaa tacgcccagc
     3721 tgctcgacct gcgtttccgc cttggtgctc ataaagcgca ctttgtcttt cagtttgatg
     3781 gtgccgtttt tcactcgaat cagcatgacc acgccgacat agttgtcaaa ccacgaatcg
     3841 acgatcacgg cttgcagcgg cgcgttttcg tcgccggtcg gcgcagggat tttggcaacg
     3901 atttcttcta aaacgtcttc cacgccgatg ccgcttttgg cggaacattg caccgcaccg
     3961 acggcatcga tgccgataat gtcttcgatt tcttgttcca cgcgttcggg gtcggcggcg
     4021 ggcaggtcga ttttgtttaa aacaggcaca acctccacgc ccaaatcaat cgcggtatag
     4081 cagttcgcca cagtttgcgc ttccacgccc tgcgacgcgt caacgaccaa aagcgcgcct
     4141 tcgcaggcag agagcgaacg agagacttcg taagagaagt cgacgtgtcc cggcgtgtca
     4201 atcaggttga gttgatacac ctgcccgtcg cgtgctttat agttgagcgc ggcggtttgc
     4261 gctttaatgg taatgccgcg ctctttttcg atgtccatgg aatcgagtac ctgcgtactc
     4321 atttcgcgca aatccaaacc gccgcaatat tggatgaagc ggtcggcaag cgtcgatttg
     4381 ccgtggtcga tgtgggcaat gatggagaaa tttcggatat ttttcattag agttgttttg
     4441 aatgtcggac agtgggtttg ggaaatgccg tctgaacaaa cggcgttgcg tccgaatatc
     4501 gggcgcaacg tggaaatagc ccgatattct aacggaaaac cgctgttttg gcatgatttg
     4561 ataaaggttt tataaagatt tgacgatttc tgccaccatt tttgcagaac ttgccgccgc
     4621 cgttttcaaa aattcgtcaa agctgatgtc tgctttttca tctgccgaat cggaaaccgc
     4681 gcggatgatg acgaaaggcg tttccaactg atgacaggtt tgggcgattg ccgccgcttc
     4741 catttctacc gccttaactt cggggaagtg cttgcggatt tccgccacgc cttcgctgct
     4801 gtggacgaag cggtcgccgc tgacaatcag accttgttct accgccgcgc cttcaaacgt
     4861 ccgcgccgcc cgttttgcct tgccgaccaa gaggtcgtct gaaacgaata cggcgggcag
     4921 ttgcggcact tgtccccaaa catagccgaa tgcggttaca tcgacatcgt ggtgtgcggt
     4981 ttccgtgcca atcaccacgt cgccgacttt caaacccttg cccaaaccgc ccgcgctgcc
     5041 ggtgttgatg acgcagtccg ctgcgaattc acggataatc caagccgttg caaccgccgc
     5101 gttgaccttg ccgatgccgc tcaatgcaag caccatgcgt tttcccgcta attcgccttc
     5161 ataggcggta aacttgccga aagagacggc tttgacattt tccatcatct cgcgcaaaag
     5221 ctcgatttct tgttccattg cgccgataac ggctactgtt ttcaaagaca tattgctgac
     5281 ctgttgtgaa tttcggatag aatgcctgat tatacacgct aacacggcag gattgagtgg
     5341 aggtggtttg tccgtgccgt ctgaaacggt ttcagacggc acggcgggtt tttggtagaa
     5401 tgggaaggta cagattgttt gaagattagg ggacgaggat gtttaccgat gaaaatatga
     5461 ccgcaaagga agaactgttc gcatggctgc gccatatgaa ccaaaacaaa ggttccgacc
     5521 tgttcgtgac gacccatttc ccgcccgcga tgaagttgga cggcaaaatc acccgcatca
     5581 cggacgagcc gctgacggcg gaaaaatgta tggaaatcgc cttttcgatt atgagtgcga
     5641 agcaggcgga agaattttca tcgaccaacg agtgcaactt cgccatcagc ctgccggaca
     5701 ccagccgctt ccgcgtcaat gcgatgatac agcgcggcgc gacggcgttg gtattccgtg
     5761 cgattaccag caagattccc aagtttgaaa gcctcaacct gccgccggtc ttgaaggatg
     5821 tcgcgctgaa aaaacgcggg ctggttattt ttgtcggcgg caccggctcg ggcaaatcga
     5881 cttcgcttgc ctcgcttatc gattaccgca atgaaaattc gttcggacac atcatcacca
     5941 tcgaagaccc gatcgagttt gtccacgaac acaaaaactg catcatcacc cagcgcgagg
     6001 tcggcgtgga tacggaaaac tggatggcgg cgttgaaaaa cacgctgcgt caggcgccgg
     6061 atgtcatcct tatcggcgaa atccgcgacc gcgaaacaat ggactacgcc atcgcctttg
     6121 ccgaaacggg gcatttgtgt atggcgacgc tgcacgccaa cagcaccaat caggcactcg
     6181 accgcatcat caactttttc cccgaggagc ggcgcgaaca attgctgacg gatttgtcgc
     6241 tcaaccttca ggcgtttatt tcgcaacgcc tcgttccgcg agacggcggc aagggcaggg
     6301 tggcggcagt cgaggtgctg ctcaattcgc ccctgatttc ggagttgatt cacaacggca
     6361 acatccatga aatcaaagaa gtgatgaaaa aatccactac cctgggtatg cagaccttcg
     6421 atcaacacct ttaccaattg tatgaaaaag gcgatatttc cctgcaagaa gcattgaaaa
     6481 atgccgattc cgcacacgat ttgcgtttgg cggtacagtt gcgcagccgc cgcgcgcaaa
     6541 gttccagccc cgatttggaa ctgctctgat ggcggtatgg atttccggac ggatggtttg
     6601 aaatgattta tccgtggcat aatgagcaat ggcggcagat tgcggaacat tgggagcgtc
     6661 gtcccaatgc atggctgttt gccggcaaaa aagatacggg gaaaactaca tttgcccgct
     6721 ttgcggcgaa ggcactgttg tgcgaaaccc ctgcaccggg ctgcaaaccc tgtggcgaat
     6781 gtatgtcctg ccatctgttt ggacagggaa gccatcccga tttttacgaa atcaccccct
     6841 tgtcggacga acccgaaaac ggacgcaaac tgttgcagat caaaatcgat gccgtcaggg
     6901 aaatcatcga taatgtgtac ctgacttcgg tacggggcgg tttgcgcgtg atcctgattc
     6961 atcctgcgga aagtatgaat gtccaagccg ccaacagttt gttgaaagtg ttggaagaac
     7021 cgccgccaca agtggtcttt ttgctggtca gccacgcggc ggacaaggtt ttaccgacca
     7081 ttaaaagccg ctgccggaag atggttttgc ccgcgccttc ccatgaagag gcattggcat
     7141 atctgcgtga aaggggtgtg gcggaacctg aggaacgtct ggctttccat tccggagcgc
     7201 cgctgtttga tgaggcggac ggtgtccgtg cgttgcggat taaactgttg gatattttgg
     7261 cagaaccaag gttgttgaag attttggatt acgccgcgct tttcgataag gaaaaacttc
     7321 cgctcgccgt atttgtcggg tggatgcaga aatggctggt cgatttggga ttgtgcctgc
     7381 aacacatgaa acccgtctat tatcccgctt atgaagacag gctgcttcag acggtatccg
     7441 gtttccgtcc gcgcaatgta tttgcggcgg aggatatgct caaacagctt gccccctacg
     7501 ggtttcatac tttaaatgtc aaaatgcaga tcgagcatct gctcatcaac tatttggaat
     7561 tgaagaaaga gaacgggtga attatgtcag acggacaaaa tattccggca aaaatgatgt
     7621 cgttgcagct gaaagacatg aatctgctgt acagctccta catgccgttt ttggaacacg
     7681 gcggtctgtt tgtgcagacc aacgacgtat tttccatcgg ggacgatatt ctgcttgccg
     7741 tagaaatcct caacttcccc aaactgttcc tgccgaccaa agtcgcctgg atcaatcctg
     7801 cgcgtacttc ctccaaaccc aaaggggtgg ggctggcatt cacaaaacac gaaaactgcc
     7861 tgaaagtcaa agaccagatc gaagtcgaac tgggcaacac aatcggcggc agcagaccta
     7921 cgtttaccat gtaacgccat gcatatcatc gattcgcact gccacctcaa ttttgaaggt
     7981 ttgaaagaac gcctgcccga agttttgtcc aacatggaag caaacggcgt ggggcaggcg
     8041 ctcgccatca gcgtcagcag ggaaagtttt gccgaagtat ccgctatcgc cgaagtttat
     8101 gaacatattt actgcacaat aggcgtacat cccgacagca aggaagccga agaattttct
     8161 attgcggaaa tggttgccgc agccgcctcg ccgaaagtgg tcggcattgg cgagacgggt
     8221 ttggattatt actggtgcaa aggcgatttg tcctggcaac acaaacgctt tgcagaccac
     8281 atcgaagcag ccaatcaaac cggactgccc gttatcgtcc atacgcgtga tgcggcggcg
     8341 gacaccttgt ctatcctgaa agaatgccgg gttaattcgg gcgttatcca ctgtttttcc
     8401 gaagacatcg gttttgcccg tgcagcaatg gatttggggc tttatatttc tttctcggga
     8461 atcgttacct ttaaaaacgc acccttggtt caggaggcgg caaaatatgt gccggacgac
     8521 cgcattttgg tggaaaccga tgcgccgttc ctcgcccccg ttcccaaacg aggcaggcag
     8581 aacgaaccgg cttttgtgcg ccataccgcc gaacatatcg ccaaattgcg gaatcaaaca
     8641 ttggaacagg ttgcggcata cacgacggaa aacttttacc ggctgtttaa aaaagtaccc
     8701 gatatgcgga ccgtctgacc ctgtaccgac gataaggaaa accatggagg caattcatcc
     8761 gtatgcatgt ccgcgctgct gccggctgcc tgccaacacg tttcggacag gcatggcaaa
     8821 ttccgcttcc aaattctgca ttgccaaagg cggcagacgg gaagtaaaaa aagacgaaag
     8881 cggcggcgga tatgccctgt gccatttgcc ggacagtagg attgtcgagg agtgggaata
     8941 tttccgttca caacattgat actgcgcgat atacggcaaa tattgtggga agtttccgct
     9001 tttgcgtata atgcgtccta cctgacaaat tttgtcaact ttatcaaaag gaataagcga
     9061 tggcttccat ccacgaccaa attaaagaag tagtaacgac acaccgcgtc gtattgttta
     9121 tgaaaggtac gaagcagttt ccgcaatgcg gtttctcttc ccgcgccgtg caaatcctga
     9181 acgcggcagg ctgcaccgat tacgttaccg tcaacgtatt ggaaaatccc gaagtacgcc
     9241 aaggcattaa ggaatacagc gactggccga ccatccccca actttatgtg aacggcgagt
     9301 ttgtcggcgg ttcggacatc ctgatggaaa tgtatgaggc aggcgagctg caagagctgc
     9361 tgaaagcctg atggattcgg caatgccgtc tgaacgtgtt tcagacggca ttttcttttc
     9421 cggcaaatca aaaaaaagta taatggcgcg tctcaaaatc acactggaac accgcgatga
     9481 acgttaatgt tatcaaccat ccgctcgtcc gccacaaatt aaccctgatg agggaggcgg
     9541 attgcagcac ctacaaattc cggacgcttg ccatcgagct ggcgcgcctg atggcatacg
     9601 aggcaagccg tgattttgaa atcgaaaaat accttatcga cggatggtgc ggtcagattg
     9661 aaggcgatcg catcaagggc aaaacattga ccgtcgttcc catcctgcgt gcaggtttgg
     9721 gtatgcttga cggcgtactc gacctgattc cgactgccaa aatcagcgta gtcggactgc
     9781 agcgcgacga ggaaacgctg aaacccgttt cctacttcga gaaattcgtg gacagcatgg
     9841 acgaacgtcc tgccctgatt atcgacccga tgctggcgac gggcggttcg atggttgcca
     9901 ccatcgacct tttgaaagcc aagggctgca aaaacatcaa ggcactggtg ctggttgccg
     9961 cgcccgaggg tgtgaaggcg gtcaacgacg cgcatcccga cgttacgatt tacaccgccg
    10021 cgctcgacag ccacttgaac gagaacggct acatcatccc cggcttgggc gatgcgggcg
    10081 acaagatttt cggcacgcgc taactgactg attttcggat ttgatatgaa ttttcaagac
    10141 tatctcgcca cattttcttc aatcgaccat ctgggcggtt tggacgttca ggatgcagat
    10201 ggcaaaacgg ttcaccacat tcctgccgtt cagggtaagc tcggttcgct caagttgtac
    10261 aacgctttgg cagaacgttt tgacggaaaa ttggacaaag aagcggcaga acagggtttg
    10321 atatggtttg ccgaacacgt tgccgacgcg cgcgcccatc ccggcaagca tcccaatatc
    10381 gacctgcttg aaaaagttgt gcaaagcggc gaaaccttgc tgctcaagcc gcttgccgcg
    10441 caataatttt cgaccatgcc gtctgaaatc cgtttcagac ggcattttgt cggaaagaag
    10501 accgtaaaac gggcattttc ttttctattt caggatacgg gcaatgatgt ttcaacacgc
    10561 aggacgacac ataaagcgtt gccctatgtg ttgccctaat ttggaagggg ttacacccct
    10621 ctcaaataaa atctgatgct gctgccacga aggacggatg tccaaatggc ggagtttcaa
    10681 ccattaagga aatacgatga aaaaaatgtt cctttctgct gtattgcttc tgtcggctgc
    10741 gacccgaacc gtgtgggcgg atacggtgtt ttcctgtaaa acggacaaca acaaatatat
    10801 agaagttcaa aaaatcaacc gcaatcttta cgaatattcg ttcggcagtg cggcaaaaaa
    10861 agaaattgcc atacgcaaca gcaaagctga cctgttgggg cgttccgaca ggtggcaagg
    10921 catgggcagc ggacgccggg caacgatgaa attccaaaac ggcgaattta tgtacaccgt
    10981 atggacgggc ttcgattccg tgactcatac ggaaagcagc ggtgttgttg tggagcgtag
    11041 gggcaaggaa gtcgcacggg tcggctgtac gccgcaaacc gcgcaggcga atttcaacga
    11101 tgctgatttt tcccggtaat cggggcggat aaggcgatgg aaacagtgaa acccatcatg
    11161 ctgattgtcc gaccgtcggg tagggcgaag gacgatgtgg aaacctgccg tcgtgccgga
    11221 tggcaggcgg aagtgttgag cccgattgaa atcgaagcag atgctgccgg actggaactt
    11281 ttgtccgaac aatatgcccg tgcggatgcc gtgttttggg tcagtccgac cgccgttgaa
    11341 accgccgtcc cgtaccttaa cctttcagac ggcataaaga tgcacatttc cgtagggcag
    11401 ggcagccgcc gtgcattgga acgctgtttg ggcagaacgg tcatcgcgcc cgaagacggc
    11461 aacgacagcg aggcggtttt gcgcctgacg gtttggaaca gtctgcccga aggtgcgcgc
    11521 gtattgtttg tgcgcggaca cggcgggcgg gattttctga tgaatgcctt gcaggagaaa
    11581 ggttttcgga cggaggtggc agaagtctat ttcagacggc ataaaccttt gaactttcaa
    11641 aatttccaaa ccgaaaatat tgccgccgcc tatattacgt ccacagaact cgtgcgcttg
    11701 ctgttcggac agcttccgcc gcaattttcc cgattcttca aatccttgct atactttacc
    11761 catcatccgc gcattgcgga ggcattgaag cgcgaaggcg tgtgttcggt cgaaaccgtc
    11821 cctacgctgg aagccgcgct ttcccattct tccatttccg tttcagacgg catggtcttt
    11881 cccggaacct caaattaata aggagcaaaa cggtgggcga acctgaaaac aaatcatccg
    11941 aacccgtacg cgagatacag gcatcaaaag aaatgccgtc tgaaacctct tccccacgca
    12001 aagaaaacga aacagaagta cacattcctg ccgctccttt tatcgtcaaa cagtccggca
    12061 gcaacgcttt ggcagtctgc gccctggtat tggcggcatt gggtttgggt acaagtggtt
    12121 ttttgtttgt ccaaggacag aatgtcttga aaaaccaaga gctggcattc aaccaaaaaa
    12181 tcgacaaagc cgctttgggc gagtcggaaa acgccgccct gttgaaagac aacctcaacc
    12241 ggcaagccgc catacaatca gagctcgacc gtttggacag cggtgtcaaa gccaacggcg
    12301 aacagattct gatgacgcaa aaagcctatc gcgagctgac taaagggcgt gccgattggc
    12361 tggtggacga aaccgatacc atactcaatt tggcagcgca acagctggtg ttgaccggca
    12421 atatccaaac ggcagtcggc gtgttggagc atatcgacag ccgcctgtcc cgtttcgatc
    12481 aggcagagct tctgccgatc aaacaggcag tcagcagcga cttggcggaa ctgaaaaacc
    12541 gtccctatgt cgatatttcc ggcacggcat tgcgcctcga caggctggaa accgccgtat
    12601 tcggactgcc gctgattttg gacggcgtat tgaaaccggg cgtacaggtg aagaacgaag
    12661 ccgcttccgc ttcatggtgg cagaacgtat gggaaaaatc cctcggcaca ttgaaggggc
    12721 tggtcgaaat ccgccgtttg gaaaacaacg atgccatgct gatttctccc gaacaggcat
    12781 attttgtgcg tgaaaacctg cgccttcgcc ttttggatgt gcgcactgca ttaatgcagc
    12841 gcaacagcga agtctatcag ggcgatttga acaatgccga agccgccgtc agacagtatt
    12901 tcgatgccaa gtctcccgcc acgcagtcgt ggctgaaaga actggcggaa ttgaaggcgt
    12961 tggatgtgcg catgactgcg gatgatggtt tgaaaaacag cctaaatgcc gtccgcgcct
    13021 atcgcgacgg tacgcgcatg acggcggcgg aaaatcaaga agcagaacag gcggcttccg
    13081 aaccggcaaa cgaaaacaca gcttccgaac cggctgccgc atcggatgtg aagaccatag
    13141 aagcaccgtc cctgccttcg gaacgcaaac cggaacagcc tgcaaaaaaa cagcccgtac
    13201 cggaaaaggc agggcgttcg ccgtccgcta aaggagaacg cgcatgaaaa cggtagtctg
    13261 gattgtcgtc ctgtttgccg ccgccgtcgg actggcgctg gcttcgggca tttacaccgg
    13321 cgacgtgtat atcgtactcg gacagaccat gctcagaatc aacctgcacg cttttgtgtt
    13381 aggttcgctg attgccgtcg tggtgtggta tttcctgttt aaattcatta tcggcgtatt
    13441 caatatcccc gaaaagatgc agcgtttcgg ttcggcgcgt aaaggccgca aggccgcgct
    13501 tgccttgaac aaggcgggtt tggcgtattt tgaagggcgt tttgaaaagg cggaacttga
    13561 agcctcgcgc gtgttgggca acaaagaggc gggcgacaac cggactttgg cattgatgct
    13621 gggtgcgcac gccgccggac agatggaaaa catcgagctg cgcgaccgtt atcttgcgga
    13681 aatcgccaaa ctgccggaaa aacagcagct ttcccgttat cttttgttgg cggaatcggc
    13741 gttgaaccgg cgcgattacg aagcggcgga agccaatctt tatgcggcgg cgaagatgaa
    13801 tgccaacctt acgcgcctcg tgcgtctgca acttcgttac gctttcgaca ggggcgacgc
    13861 gttgcaggtt ctggcaaaaa ccgaaaaact ttccaaggcg ggcgcgttgg gcaaatcgga
    13921 aatggaacgg tatcaaaatt gggcataccg ccgccagctg gcggatgctg ccgatgccgc
    13981 cgctttgaaa acctgcctga agcggattcc cgacagcctc aaaaacgggg aattgagcgt
    14041 atcggttgcg gaaaagtacg aacgtttggg actgtatgcc gatgcggtca aatgggtcaa
    14101 acagcattat ccgcacaacc gccgacccga acttttggaa gcctttgtcg aaagcgtgcg
    14161 ctttttgggc gaacgcgatc agcagaaagc catcgatttt gccgatgctt ggctgaaaga
    14221 acagcccgat aatgcgcttc tgctgatgta tctcggtcgg ctcgcctacg gccgcaaact
    14281 ttggggcaag gcaaaaggct accttgaagc gagcattgca ttaaagccga gtatttccgc
    14341 gcgtttggtt ctggcaaagg tttttgacga aaccggagaa ccgcagaagg cggaggcgca
    14401 gcgcaacttg gttttggcaa gcgttgccga ggaaaaccga ccttccgccg aaacccattg
    14461 aaaccttcag acggcatcgt tgaaatgccg tctgaaaacc atttcacttg acaaacagac
    14521 tgacagaaaa cccgtatgac tcttttaaaa aacgatacct tcctccgcgc cctgcttaaa
    14581 cagcccgtcg aatacacgcc gatttggatg atgcgtcagg cggggcgtta tctgcccgaa
    14641 tacaaagcca cacgcgcgaa agcgggcagc ttcctcgatt tgtgtaaaaa caccgaattg
    14701 gcgaccgaag ttaccatcca gcccttagaa cgcttcgatt tggacgcggc gattctgttt
    14761 tccgacatcc tgaccgtccc cgacgcaatg ggcttgggac tgtattttgc cgaaggcgaa
    14821 ggcccgaaat tcaaacgcgc cctgcaacac gaggacgaca ttgccaaatt gcacgtcccc
    14881 gatatggaaa aactgcaata cgtctttgat gccgtcagct ccatccgtaa agcactggac
    14941 ggccgcgtac cgcttatcgg cttctccggc agcccgttca cgctcgcctg ttatatggtc
    15001 gaaggcggcg gcagcaaaga attccgcacc atcaaaacca tgatgtactc gcgccctgat
    15061 ttgctgcaca aaatcctcga taccaacgcc caagccgtta ccgcctacct caacgcccaa
    15121 atcgacgcgg gcgcgcaggc ggtgcagatt ttcgacactt ggggcggcgt gttgagcgac
    15181 gcggcgttta aagaattcag cctcaaatac atccgccaaa ttgttgccgg actcaaacgc
    15241 gaaagcgaag gcaggcgcgt gcctgttatc gtgtttgcca aaggcggcgg gctgtggctg
    15301 gaaagcatgg cagaaatcgg cgcagacgca ttgggcttgg actggacgtg caacatcggc
    15361 gaagcacgcc gccgcgtcgg caagcaagtc gccctgcaag gtaacttcga cccgttcgcc
    15421 ctcttcggta cgccggaatc catccgcacc gaagccgcac gtatcctagc cgactacgga
    15481 cacggcagcg gccatgtctt caacctcgga cacggcatca accaacacgc cgaccccgaa
    15541 cacgccaaaa tcttagtcga taccgtacac gagctgtcgc ggcagtatca cggcgggtaa
    15601 gccggcagga aaccgcccga tatgccgtct gaaagccgag ggatggaaaa ttaggtaata
    15661 cggcaatatc cgccgtgtac ggatagtaca tgacggcggc ggtgttgccg tattggcgta
    15721 atcccaaccg tccctatttt cagacggcat ttttgttttc agatgcaggg aaaaccgatg
    15781 gcaaaaacgc ttaaaaccct ttaccaatgc accgaatgcg gcggcacctc cccgaaatgg
    15841 cagggtaaat gcccgcattg cggcgagtgg aacacgcttc aggaaagcct tgccgcgccc
    15901 gagccgaaaa acgcccgttt ccaatcttgg gcggcggata cctcgaccgt ccaatccctc
    15961 tccgccgtta ccgcgaccga agtgccgcgc aacccgaccg gcatgggcga actcgaccgc
    16021 gtattgggcg gcggtttggt cgatggcgcg gtcatcctgc tcggcggcga ccctggcatc
    16081 ggcaaatcca cgctgctgtt gcaaaccatc gccaaaatgg cgcaaagccg taaagtgcta
    16141 tacgtttccg gcgaagaatc cgcccaacaa gtcgccctgc gcgcgcagcg tttggaactg
    16201 ccgaccgacg gcgtaaacct tcttgccgaa atccgcatgg aagcgattca ggcggccttg
    16261 aaacagcatc agcccgaagt tgtcgtcatc gactctatcc aaaccatgta ttccgaccaa
    16321 atcacgtccg cccccggctc cgtgtcgcag gtgcgcgagt gtgccgccca actgacgcgc
    16381 atggcgaaac agatgggcat cgccatgata ctggtcggac acgtgaccaa agacggcgcg
    16441 attgccggcc cgcgcgtgct ggaacacatg gttgataccg tgctgtattt cgagggcgac
    16501 caacattcca actaccgcat gatacgcgcc atcaaaaacc gcttcggcgc ggcaaacgaa
    16561 ctgggcgtgt tcgcgatgac ggaaaacggt ttgaaaggtg tgtccaaccc gtccgccatc
    16621 ttcctcgcca gctaccgcga cgatacgccc ggctcgtgcg ttttggttac acaggaaggc
    16681 agccgcccgc ttttggtcga aattcaggca ttggtcgatg acgcgcacgg cttcacgccc
    16741 aaacgcctca ccgtcggact ggaacaaaac cgtcttgcga tgctgcttgc cgtgttaaac
    16801 cgccacggcg gcatcgcctg tttcgatcag gatgtgttcc tcaacgccgt cggcggcgtg
    16861 aaaatcggcg aaccggcggc ggatttggcg gtcatcctcg cgatgctttc cagcttccgc
    16921 aaccgcccta tgcctgaaaa aaccgtggtt ttcggcgaaa tcggcttaag cggcgaagtc
    16981 cgccccgtcg cacgcgggca agagcggctc aaagaagcgg aaaaactcgg cttcaaacgc
    17041 gccatcgttc ccaaagccaa tatgccgcgc aacgccaaag agtttccgaa cctgaaaatc
    17101 tacggcgttt cgagtttgca ggaagccatc gatatttgcc gtgacagcag ggaataaacg
    17161 gaaatgccgt ctgaaatcag gtttcagacg gcatttggtt tgtggcggat tgaaacaaga
    17221 aggcataccg gcgacagata agatttgcgg caaagttgcc tgtgatatgg caaaacgcac
    17281 acgcccgtca tccccgcaag ggcgggaatc cggaatcgtc cgtttcggca atgattgaaa
    17341 atcacggtaa cccaaccgct tggattcccg acttcgtggg aatgaggggc gtgtgtgttt
    17401 gatttccatc cgccatatgt cggcgacggg cttattcgcc tacggttttt tgtatcagtt
    17461 tttcggcgtt tgccaaagtg tttgccactt cgtcaaaacc gatgcggctg ccggcgatga
    17521 gggcgcgcgt atcggtatag gcggcgcgta ctttgccgtc tgtttcggta acgaggacgc
    17581 gcaggggcag ttgcagggcg aaggcggggt ctttgaccat cagcggcgtg ccggctttgg
    17641 gcgtgccgaa gacgatgact tttgccggct gcatcgttaa gccgtttcgg tgggcggctt
    17701 cctgatggtc gatgacggca aaaatgtcca tccctttgct ttttatggcg gtttcaaggc
    17761 ggctgacggt ttcgtcaaaa ctgtattttg aggtgagggt atgcgtggtc atagcggttt
    17821 cgttttgggt ttgcggttcg ctggcaggat gtgccgaagc ggttgaaatg cagagtgcgg
    17881 atgcggcaat cagggggagt atgtgtttca tcgtatttcc tttttccttt tcggtttgtt
    17941 tatcaggctt cggacggggc ggcacgcgcc gcgcccgatg ttgcgccgcg tgctggggtg
    18001 tcgtatgccg tctgaaagcc tgtcctttca gacggcattg cgtcatttca tccctttttt
    18061 gagcaggtct tcataaccgc cgtgattggc aacatttgta taacctgctt ttttcagctc
    18121 ctgaagggcg gctttggcac gccgtccgct gcggcagtag aggttgaccg gcgtgtcttt
    18181 gtcgggcgcg gcttcgtgta tgcggcggac gatttggtcg acggggatgt tgaccgcgtt
    18241 gtgcaaatga ccttcgctaa attcctgttc ggaacggaca tcgatccaaa cggccggatg
    18301 ttgcgcggtt tgggcggcgg ataggggttt ttgcggggct gcctgcgcgg caaaggcggc
    18361 tgaggcaatg agtgcggcgg taatcaggtg tttgatattc atagggttct cctgcggttg
    18421 tcgtcttaag ggacgggaag ttattttatc tgttccaaag cggcggcatc tatgtcccaa
    18481 cgccaaacgc cgccgccttt gccatccaat ccgcgcaaaa acaggtagcg gacggaaacg
    18541 gcggcgggcg gttgtccgcg cagtttgaag tagcgtgcgg cggcaacggc gtaaatcagc
    18601 gcctgaaggt aatagtggtg gtgcgcgacg gcttcgtcca tcgcctgttg cgtgtaggcg
    18661 gatgcgtccg cgccgagatg gtttgatttg tagtcgatga cgcagatatt gccgtcgggg
    18721 tcttggcaga ccatatcgat aaagccgttt aaaaagccgt tgacggtgtg gaagtcgagc
    18781 gtttcggcgg cggcacggca gacttcgggc aatcggatat cgtcgcgggc aaaccagtcg
    18841 cgcagccgtt tgaggccgaa gtcttcggtg tggagggtaa agcccatttc gggacagcgg
    18901 cactcgggcg ggatgtcgga caggcagtat gcccccgtca gcggcgtttt ctggcaggct
    18961 tccgccattt cggcaacggc aggcagccat atttcttcaa atccgtattt tttcagcttg
    19021 tcggcaatga gagtttcctg tccggcggct gcttgtccga atttgaaatc ttcaagaatt
    19081 tcgtgcaggc acagccccgc ctgcgtgcct ttcggaaaat cgtgtatcga tatgccgtct
    19141 gaagccgtcg gcgtttcaga cggcatcgcc ggcaccgagg tttcggcggc atccaaggac
    19201 gggcaggcat cttcttcgcc gccgtcgggc gtttgggtat ggcggcttaa ggcggtaaag
    19261 ctggtgtggc ggacaaatcg gaatctgcgt tcgggaatgc tgtttgcggc aaattcggcg
    19321 gtttgaccgg cgttgccgcg ataggcggca gggggcggcg catcttctgt gaaggcgaaa
    19381 tccgtgccgg ccggggcatt gtccgtcaaa cgccgccagt tgcgtttgag catcgcgatg
    19441 ccgtcttttt cccggtcata ggtttggcgg acggtttcgc ggctgtcttg cggcaagcct
    19501 tcaatcaggt aggcgagggg gttgtcggcg gtatcggaag aataggcggc gtagatgttg
    19561 agctgttcct cggcacgcgt cagcgcgaca taaagcaggc gcaggcgttc cgccatttct
    19621 tcgtcggcgt attgcttctg ttcgtcttcc gacagttgcg cctttgccaa cagttcggtt
    19681 cggtttgcgc tttggtggag gatttgccag tcggacggtc cggtatcttg cgcgtcccac
    19741 gcaaacgggc agtataccag cggatactgc aaacctttcg aggcgtgcat ggtaacgatt
    19801 ttgaccaaat cttcgtcgct ttccagacgg atggcgcggt tgtcgccgct gttgttgccg
    19861 gccaggctga tttggtcgcg caaccatttg tgcagcgcgg cggggttgcg gttttgcgcg
    19921 tcttcggcgg caagcagttc gagcagttgg aaataattgg tcaggctgcg cccgttgttc
    19981 cggcttaaga ggcgcgtttc gatgccgtgt gtttgggaaa attgctgcat ggcggcgaaa
    20041 atgccgtatt gattccagtt gtcgagcgcg gttcgggcag attccgccca atgcaaaatc
    20101 tcgctttcgt tttggttgaa gtcgtgcaat tgctgcgcgt cataaccgaa tatgccgctt
    20161 gtcaggacaa agcgcagcgt tccggcgcgg cgcggttcga gccagaagcc gatgagtgcg
    20221 gaaagggcgg cggcttcggg cgaggcgaac acggattcgc gcgaaagcag gacgctttgc
    20281 acctgccgtt ttttcagggc agcggaaacc atcaccgcct cgttgtgcgt gcgtaccagc
    20341 acggcaatat cgcccgactg caacgggcag cctttgaaat tcagacggca ttcggcggct
    20401 tcgttgagcg cgtgggcgat ttcgtcggcg caatagtcgg cggcacggcg gcgcaaaacg
    20461 tctttgttgg ctttttcatt gtcgttttcg tgcagccaac gaacctgtac ggcaggacgt
    20521 tcgggggaca acctgctttc ggcacgcgcc gcaccgactt ccgaatagcc gatgttttcc
    20581 aaaacgaacg ggcgttcttt gaggcggaac agcgcgccta tgctgccgat aagcgcggcg
    20641 tggctgcggt agttggtggc gagcgtgtag cggtgccgcg cgtcttccgc cgcctgaagg
    20701 taggcgtaaa tgtccgctcc gcgaaagctg taaatcgcct gtttgggatc gccgacgagg
    20761 aacagcggtc ggttttgggc gatgaagatt ttttggaaga tttcgtattg cagcgggtcg
    20821 gtgtcttgga actcgtcgat cagcgcggtt tcccagtttt cggcaacggc gcgggcgagg
    20881 gtttcggcgt gcggattgtc ggtcagcgcg gtgtggacat cgagcagcag gtcgtcgaaa
    20941 ccgcgttcgc ggcgcgattt tttcatctcg gcaaggctgc ggttgaggta tccgattaaa
    21001 tccagttgca gccggattat tgttgcttct tccgcttctt cgagtgcgtc caaatcacgc
    21061 ctgaagtctg ccagtttctg caattcggca aatactgccg catcgggcgt tttgcctttt
    21121 ttcagtccgg cttcgagttt gtcggacgca agtttcaaga gccgttcgtg cagctttgcc
    21181 tccaaaaagg gcaaatccgg cgacagggct ttttgttcca atgcgtcaaa cagttcggca
    21241 aaactgtttt tccgatatga attgccgttt aaaaggggat ggatgcgcca aaaagtttct
    21301 tttaattcag ccagatttcc gcaaatgttt tgccagcttg ccaaagcggc atcccgggct
    21361 tgcggcaaat cggtttgcgg acggcggaaa ttcaggtacg ggcgggacag gtaggcgcgg
    21421 atttgggcaa ggacggtttg cggcacagct ttgcgtttaa acgccaatgc ggcaagcacc
    21481 ggatcattgc tgacgcgttc ccgccaaaaa tcttgcgccg ggacaagcag gcggtcgccg
    21541 tcttcttcgg tcagttcgac atcgaacggt gcttggcaca aaaacgcgta gtcgcgcagg
    21601 atgcgctggc agaagccgtg gatggtatag atggcggcgt tgtcgaattg cccgatggcg
    21661 gctttgaggc ggacaatcag acgcgtccgg ccctcttttt gcaaagcctg ttttaagagt
    21721 gcgggcagga aggtgtcgcc tttgtggtgt tcggcgcagt aggcggcgat gccgtctgaa
    21781 agcgtgtcgt ctccaagttt ggcaatttct ttactttcta aaacctgcaa cacatcgtcc
    21841 aaacgtgcgc gcaggcgtgt tttcaactcg gcggtggcgg ctttggtgaa ggtaacgacc
    21901 aatacgcgct cgacgttttt ttgttccaat acgatcaggc gcgtaaacag ggcggcaatg
    21961 ccgtaggttt ttccggtgcc ggcagaggcc tcaatcaggt tggtgccgga aatggggacg
    22021 gttagcgggt caaatgcttg gatgggtgca gacatagtgc gcgctcggaa aacggttgga
    22081 cggtatagtg gattaacaaa aatcaggat
//
LOCUS       DAWKJW010000013        21976 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.013, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000013 DAWKJW010000000
VERSION     DAWKJW010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21976)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21976)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21976
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.013"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..1190)
                     /locus_tag="WJJ54_000408"
     CDS             complement(<1..1190)
                     /locus_tag="WJJ54_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase-like protein"
                     /protein_id="HEZ7341317.1"
                     /translation="MSTFPNHTMHTISFPNRTRLTALPPLSLYIHIPWCIKKCPYCDF
                     NSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFGGGTPSLFQAESIDRLLSG
                     VRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGVQSFNDDMLSRLGRVHN
                     GKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIATGATHISAYHLTMEP
                     NTPFGHTPPKGLPQDEAALDIEDAVHGALESAGFVHYETSAFAKPAMQCRHNLNYWQF
                     GDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPSEAVERKTVAAEDLPFEF
                     MMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVFRPTEKGRLFLN
                     DLLQ"
     gene            complement(1223..3748)
                     /gene="ligA"
                     /locus_tag="WJJ54_000409"
     CDS             complement(1223..3748)
                     /gene="ligA"
                     /locus_tag="WJJ54_000409"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEZ7341318.1"
                     /translation="MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEY
                     YTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPML
                     SLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGKPEYVIEPKFDGLAISLLYRDGVL
                     VQAATRGDGTTGEDVTQNIKTVANIPLRLHGENTPELIEVRGEVLMQKADFAALNKRQ
                     AENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQGGFVAEEHIQELAYF
                     QALGFSLPNGNFGCFKNIDEVLAFYEQMQQKRPELPYEIDGMVVKVNSLAQQRELGFI
                     SRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQ
                     DEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDGIGHRQDDLFAET
                     PSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHFAS
                     RKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETTDKTVAESDQTPSEG
                     SSVGASGKHKKQPVKWAENILGGIESGKTPELARFLFALGIRHVGERTAKTLAQAFGT
                     LERVRRAPEPVLACLPDIGTVVAHSIAHFFAQAEQQAMIDELLAAGVAPQTQAVTIPP
                     ARHAEPQRWIARLPDFKISENKAQALWELAGKNIEGLQNDKALPADWQAWRSEPQNAA
                     LLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGK
                     VSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLLG"
     gene            complement(3896..5182)
                     /locus_tag="WJJ54_000410"
     CDS             complement(3896..5182)
                     /locus_tag="WJJ54_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HEZ7341319.1"
                     /translation="MIYIVLFLAAVLAVVAYNMYQENQYRKKVRDQFGHSDKDALLNS
                     KTSHVRDGKPSGGSVMMPKPQPAVKKTAKPQDPAMRNLQEQDAVYIAKQKQAKASPFK
                     TEIETALEESGIIGNSAHTVSEPQTGHSAPKPADAPAKPAPVPQTPAKPLITLKELSK
                     VELPWFDVRFDFISYIALTEAKELHALPRLSNRCRYQIVGCTMDDHFQIAEPIPGIRY
                     QAFIVGIQAVSRNGLASQEELSAFNRQVDAFAQSMGGQTLHTDLAAFIEVASALDAFC
                     ARVDQTIAIHLVSPTSISGVELRSAVTGVGFVLEDDGAFHYTDTSGSTMFSICSLNNE
                     PFTNALLDNQSYKGFSMLLDIPHSPAGEKTFDDLFMDLAVRLSGQLNLNLVNDKMEEV
                     STQWLKDVRTYVLARQSEMLKVGIEPGGKTALRLFS"
     gene            complement(5376..5948)
                     /gene="ampD"
                     /locus_tag="WJJ54_000411"
     CDS             complement(5376..5948)
                     /gene="ampD"
                     /locus_tag="WJJ54_000411"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HEZ7341320.1"
                     /translation="MDNHAEAHWQNGWLQSIRHTPSPNFSPRETGETVSLIVLHNISL
                     PPFEYGTDAVEKLFANRLDPDGHPFFSLIHTLRVSSHFLIKRGGETVQFVSCDNMAYH
                     AGVSSFGGREKCNAFSIGIELEGCDFEPFTEAQYRSLETLLAALCRRYPITAVTGHQD
                     IAPGRKTDPGHFFDWRRIRGKGFPVDRNAV"
     gene            6032..7027
                     /gene="mltG"
                     /locus_tag="WJJ54_000412"
     CDS             6032..7027
                     /gene="mltG"
                     /locus_tag="WJJ54_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEZ7341321.1"
                     /translation="MLRKLLKWSAVFLTVSAAVFAALLFVPKDNGRAYRIKIAKNQGI
                     SSVGRKLAEDRIVFSRHVLTAAAYVLGVHNRLHTGTYRLPSEVSAWDILQKMRGGRPD
                     SVTVQIIEGSRFSHMRKVIDATPDIEHDTKGWSNEKLMAEVAPDAFSGNPEGQFFPDS
                     YEIDAGGSDLRIYQTAYKAMQRRLNEAWESRQDGLPYKNPYEMLIMASLVEKETGHEA
                     DRDHVASVFVNRLKIGMRLQTDPSVIYGMGAAYKGKIRKADLRRDTPYNTYTRGGLPP
                     TPIALPGKAALDAAAHPSGEKYLYFVSKMDGTGLSQFSHDLTEHNAAVRKYILKK"
     gene            7087..7707
                     /locus_tag="WJJ54_000413"
     CDS             7087..7707
                     /locus_tag="WJJ54_000413"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEZ7341322.1"
                     /translation="MKPQFITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTP
                     VGEALREILLNPETKAGLRAETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFA
                     YQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQTREKDRFEQEQAD
                     FFMRVRSVYLNRAAACPERYAIIDSNRSLDEVRNSIEKVLDGHFGC"
     gene            7929..9209
                     /locus_tag="WJJ54_000414"
     CDS             7929..9209
                     /locus_tag="WJJ54_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme"
                     /protein_id="HEZ7341323.1"
                     /translation="MENSLKEAALKFHELPVPGKISVTPTKSLATDKDLALAYSPGVA
                     APCMEIHADPQNAYKYTAKGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFA
                     GVDVFDIEIDEKDPQKLVDIIASLEPTFGGINLEDIKAPECFYIERELRKRCKIPVFH
                     DDQHGTAIITAAAVLNALRYTGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTV
                     CDSKGVIYKTREDKDRMDESKQFYAIEDNGQRVLADAVKGKDIFLGLSGANLLTPEML
                     NTMNEKPIVFAMANPNPEILPPLAKETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGAL
                     DVGATTINEEMKRACVYALADLAMEEVTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPR
                     VATAAAKAAMESGVATRPIADLEAYAAKLSEWKL"
     gene            9445..9716
                     /locus_tag="WJJ54_000415"
                     /pseudo
     CDS             9445..9716
                     /locus_tag="WJJ54_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713445.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            9756..10790
                     /locus_tag="WJJ54_000416"
     CDS             9756..10790
                     /locus_tag="WJJ54_000416"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_025462052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEZ7341324.1"
                     /translation="MPNCFKFHTVIERHWQKPYPVLSFLLKPLSGLFAKIAAKRRTDF
                     LSGKRQSEKLPVPVVVVGNIHAGGTGKTPIVAALVSGLQEKGVKVGIISRGYGRKSKA
                     VHVLNEKSRAEDAGDEPLLLFRKTGAPTAVGSSRAEAGRALLAAHPDIGLIVADDGLQ
                     HYALRRDVEIAVFPAADTGRTDLDLLPNGSLREPLLRLDSVDAVVVSGGKADVSFMPS
                     ENMFHSRIEAGRIYRLNNPSEILDTGRLKNQTVVAVAGIAKPARFFDSLRNMGITVKR
                     TVALPDHADISAADLPDADAVIITEKDAVKFSDGICTDNVWVLPVCAIIEPDLAAFVL
                     ERLEDVPKAV"
     gene            10996..11577
                     /locus_tag="WJJ54_000417"
     CDS             10996..11577
                     /locus_tag="WJJ54_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HEZ7341325.1"
                     /translation="MKLKTLLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEK
                     NMIEGFNAGFKPYADKALAEMPEAKKDQAAKAFNRYRENVLKDLITPEVKQAVRNTLL
                     KNAREIYTQEEIDGMIAFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIARHHL
                     PAFTEELRRIICGGKNPDAGCKQAGQVGKRHQK"
     gene            11646..11828
                     /locus_tag="WJJ54_000418"
     CDS             11646..11828
                     /locus_tag="WJJ54_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEZ7341326.1"
                     /translation="MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPY
                     MLENEARPLGEEELEA"
     gene            11825..12586
                     /gene="kdsB"
                     /locus_tag="WJJ54_000419"
     CDS             11825..12586
                     /gene="kdsB"
                     /locus_tag="WJJ54_000419"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEZ7341327.1"
                     /translation="MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAV
                     RVVVATDHPDIQTACQAHGVEVVMTSNRHESGTTRLAEASAALKLPPHLVVVNVQGDE
                     PLIAPELIDRTAEVLVENNVQMATAAHELHDFDELMNPNAVKVVLDKNRNAIYFSRAP
                     IPYPRDAMRAGKREMPFETAVLRHIGIYAYRAGFLQRYAEMSVSPLETIESLEQLRVL
                     WHGYPIAVETAKEAPAAGVDTQEDLDRVRAVFQTI"
     gene            12609..12926
                     /locus_tag="WJJ54_000420"
                     /pseudo
     CDS             12609..12926
                     /locus_tag="WJJ54_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            13031..13228
                     /locus_tag="WJJ54_000421"
     CDS             13031..13228
                     /locus_tag="WJJ54_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341328.1"
                     /translation="MAHGHKARADGLAQQPDKAAEANEEEYLTKALSQNLLSTLDVAL
                     ARFPEDAWFQEIKQDAQKHFA"
     gene            13385..13477
                     /locus_tag="WJJ54_000422"
     tRNA            13385..13477
                     /locus_tag="WJJ54_000422"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13419..13421,aa:Ser,seq:gct)
     gene            13903..14688
                     /locus_tag="WJJ54_000423"
     CDS             13903..14688
                     /locus_tag="WJJ54_000423"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEZ7341329.1"
                     /translation="MSRIRQAFAALDGGKALIPYITVGDPDIRTTLALMHGMVANGAD
                     ILELGVPFSDPMADGPVIQRAAERALANGISLRDVLDVVRKFRETDTQTPVVLMGYLN
                     PVHKMGYREFAQEAAKAGVDGVLTVDSPVETIDPLYRELKDNGVDCIFLIAPTTTEDR
                     IKTIAELAGGFVYYVSLKGVTGAASLDTDEVSRKIEYLHQYIDIPIGVGFGISNAESA
                     RKIGRVADAVIVGSRIVKEIENNTGNEAAAVGALVKELKDAVR"
     gene            14726..15598
                     /locus_tag="WJJ54_000424"
     CDS             14726..15598
                     /locus_tag="WJJ54_000424"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEZ7341330.1"
                     /translation="MSWLDKILPPKIKNRGKDGSSNVPEGLWHKCPSCSATVYSTELQ
                     QNNQVCPKCNHHNPLSARQRLNLLLDEDGREEIAGNVKPTDPLKFKDSKKYPDRLSAA
                     RKLTGEDDALVVMKGKMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGIRRAVADNCPF
                     VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLG
                     DVVLAEPNALIGFAGPRVIEQTVRETLPESFQRAEFLLEKGAIDQIVDRRDMKRRISD
                     LITLLCRQDKVSAA"
     gene            complement(15658..16269)
                     /locus_tag="WJJ54_000425"
     CDS             complement(15658..16269)
                     /locus_tag="WJJ54_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNP1-like family protein"
                     /protein_id="HEZ7341331.1"
                     /translation="MRRTALLLLALAAGTSLAAGFSQKDTPINTRYRETPEEAAAREF
                     KEHTAKLPPLPDTHSDGWFDIYVDENYGKQPKILLDSLQIMPAPDGSIRYILNIRSDK
                     GYDNLTAEGIFCARFSIRFGNGKPSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRN
                     DALRTVLYQAFCEGGVPADTKGLVQRLKERAGRYAPSIKPHNK"
     gene            16378..16602
                     /locus_tag="WJJ54_000426"
     CDS             16378..16602
                     /locus_tag="WJJ54_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HEZ7341332.1"
                     /translation="MNSETLDVTGLKCPLPILRAKKALAQMQQGDVLTVLATDGGAPG
                     DFEAFCRQTGHVLLDASEQDGVFTLVVQHK"
     gene            16603..17208
                     /locus_tag="WJJ54_000427"
     CDS             16603..17208
                     /locus_tag="WJJ54_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341333.1"
                     /translation="MPSEMRMSRLMLLLSAFVLAACNAQNRQSGVRHQDFARVAVDLF
                     RSACVLTQGSFESVSKFAAVGHFVPVGKEDLSHLPPTVAEPDVQALWTLERDGGIYYL
                     SLTRDSCSVKAERADSAALLEHFDGLVRQPPKNANIELRAEQSVQASFEIRQVSYAWR
                     EAGSSEETVLTAQTADSPDLPVQAVLNLTHRSHNGKPLILP"
     gene            17268..18302
                     /gene="pyrC"
                     /locus_tag="WJJ54_000428"
     CDS             17268..18302
                     /gene="pyrC"
                     /locus_tag="WJJ54_000428"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEZ7341334.1"
                     /translation="MQTLTIIRPDDMHLHLRDGDALKAVAPYTARQMGRAVIMPNLKP
                     PVVSVADALAYKARIMAALPEGSAFEPLMTLYLTDQATPALVREAKAAGIVAFKLYPA
                     GATTNSDSGVTDLFKLIPVLEEMAKQGILFLVHGEVTDPEIDIFDREAAFIGRVMKPV
                     LAQVPNLKVVFEHITTAEAARLVLEAGDNVAATVTPQHLLLNRNDLLVGGVRPHHFCL
                     PVLKRETHRQALVAAVTGEKAHKFFLGTDSAPHAKSAKENACGCAGMFSAMTAIELYA
                     EVFEKAGALDKLEAFASKNGARFYGIPENTDTITLVKQSQTVPASIPYGDGELVPMRA
                     GGEIGWTVQY"
     gene            complement(18668..19093)
                     /gene="nusB"
                     /locus_tag="WJJ54_000429"
     CDS             complement(18668..19093)
                     /gene="nusB"
                     /locus_tag="WJJ54_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEZ7341335.1"
                     /translation="MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMPDFAKADE
                     ELFNKLFFGTQTNAADYIQKIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVI
                     INEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR"
     gene            complement(19171..19647)
                     /locus_tag="WJJ54_000430"
     CDS             complement(19171..19647)
                     /locus_tag="WJJ54_000430"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEZ7341336.1"
                     /translation="MNTIAPNLDGKHLRIGIVQARFTNEIGSEMLKVCCRTLQELGVA
                     DENITVATVPGALEIPIALMNLASSEKFDALIAIGVVIRGETYHFELVSNESGAGVSR
                     VALDYNIPIANAVLTTENDAQAIERIEEKASDAAKVAVECANLVNLLLEEQFEDEE"
     gene            complement(19695..20018)
                     /locus_tag="WJJ54_000431"
     CDS             complement(19695..20018)
                     /locus_tag="WJJ54_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2185 domain-containing protein"
                     /protein_id="HEZ7341337.1"
                     /translation="MNAFAQALSSALDRCIATNTVAKQNRPVGFLYREAPVFENDSGW
                     RFFSGDETDEYTDDPDNFSIVSLADIAKTNPETAALLSQPEGSAWELAEDGTFQTVAD
                     WQPQD"
     gene            20185..20904
                     /gene="rnc"
                     /locus_tag="WJJ54_000432"
     CDS             20185..20904
                     /gene="rnc"
                     /locus_tag="WJJ54_000432"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEZ7341338.1"
                     /translation="MKDDVLKQQAHAAIQKRLGYAFRDISLLRQALTHRSHHAKHNER
                     FEFVGDSILNYTVARMLFDTFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLG
                     AGELKSGGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFADRVRCADFQNQAKD
                     GKTALQEALQARRFALPKYRIEEQIGHANDSMFVVSCDLGELGFVCRAKGTSRKAAEQ
                     EAAKEALKWLEEKLPLKKKKK"
     gene            20951..21874
                     /gene="era"
                     /locus_tag="WJJ54_000433"
     CDS             20951..21874
                     /gene="era"
                     /locus_tag="WJJ54_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEZ7341339.1"
                     /translation="MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKIS
                     ITSKKAQTTRNRVTGIYTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVV
                     VFVVEAMRFTDADRVVLKQLPKHTPVILVVNKIDKDKAKDRYALEAFVAQVRAEFEFA
                     AAEAVSAKHGLRIANLLELLKPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLG
                     EELPYAMNVEVEQFEEEDGLNRIYIAVLVDKESQKAILIGKGGERLKKISTEARLDME
                     KLFDTKVFLKVWVKVKSGWADDIRFLRELGL"
BASE COUNT         4873 a         5362 c         6483 g         5258 t
ORIGIN      
        1 cattgcagca aatcgtttaa aaacaagcgt cctttttcgg tcgggcggaa tacggcgggg
       61 tcggtttcca gcaggccttt ttgccttgct gtttcgattt gcgccatgat tttggcactc
      121 ggtacgcccg tgcgttcctg caacatcgcg gcgggtacgc cgtcggtcag gcgcagggcg
      181 ttcatcatga actcaaacgg caaatcttcg gcggcgacgg ttttgcgttc gacggcttcg
      241 ctcggtcggt tttgcattaa ggcgaggtag tcgttggggt ggcggcggcg gacggtgcgc
      301 tcgatgcggt cgggatagga aattttgccg tgcgcgcccg cgcctatgcc taaataatcg
      361 ccgaactgcc agtagttcaa attgtggcgg cactgcatgg ctggtttcgc aaaagccgat
      421 gtttcgtagt ggacaaaacc cgcgctttcc agcgcgccgt gtaccgcgtc ttcgatgtcg
      481 agggcggctt cgtcttgcgg caaacctttc ggcggcgtat gaccgaacgg cgtgttcggt
      541 tccatcgtca gatgatacgc gctgatgtgg gtcgcgcccg tagcgatagc ggtttgtacg
      601 tcgtccaatg ccgtctgaac ggtttggttc ggcagggcat acatcaagtc gatattgact
      661 ttatcaaata atttcaaggc ggtatcgata gcggttaagg cttccttgcc gttgtggacg
      721 cgccccagcc ttgagagcat atcgtcgttg aaactctgta caccaataga aagccgcgtg
      781 atgcctgcgt ctttaaatcc ttgaaacttc tcgatttcaa atgtccccgg attggcttcc
      841 aaggtaattt ccgcttccgg ctgcaagcgc aacagcgaac gcacgccgct caataaacgg
      901 tcaatcgatt ccgcctgaaa caggctgggc gtaccgccgc cgaaaaagat cgtttccacc
      961 ggcctgcccc aaatattggg caattcgagc tgcaagtcgg tcagcagcgc gtcgatatag
     1021 gcggcttcgg gcaatccgtt tttcaggctg tgggaattaa agtcgcaata cgggcatttt
     1081 ttgatgcacc acgggatgtg gatgtaaagc gacaggggcg gcagggcggt gagtcgggtg
     1141 cggtttggaa aggaaatggt gtgcatggtg tggttcggaa aagtggacaa tgccgtctga
     1201 aggcggttca gacggcatag gttcagccga gcagggtaag cagttcggct tcgctgagga
     1261 cggaaacgcc caaggcattg gctttttcca gcttgctgcc cgcggcttct ccggcgacga
     1321 cgtagtcggt ttttttggac acgctgccgg aaactttgcc gcctgcggct tcgattaggg
     1381 attgggcttg gtcgcgtttg agcgtgggca gggtgccggt taatacaaag gttttgcctg
     1441 ctacggcttt attgatgccg tctgaacctt gcgccgcctc gtcttcagac ggcatttgcg
     1501 cgaagaaggt tttcaggttt tcgagtaggg cggcgttttg tggttcgctg cgccatgctt
     1561 gccagtcggc ggggagggct ttgtcgtttt gtagaccttc tatgttttta ccagcgagtt
     1621 cccataaggc ttgggctttg ttttcgctaa ttttgaagtc gggcaggcgg gcgatccagc
     1681 gttgcggttc ggcgtggcgg gcgggcggga tggtaacggc ttgggtttgc ggggcaacgc
     1741 ctgcggcgag cagttcgtct atcatcgcct gctgttcggc ttgggcgaag aagtgggcaa
     1801 tggaatgcgc cactaccgta ccgatgtcgg gcaggcaggc gaggacgggt tcgggggcgc
     1861 ggcggacgcg ttccaatgtg ccgaatgcct gcgccagcgt tttggcggtg cgttcgccga
     1921 cgtggcggat gccgagcgcg aacaggaagc gcgcgagttc gggcgttttg ccggattcta
     1981 tgcccccgag gatgttttcc gcccacttga ccggttgttt tttatgtttg cccgacgcgc
     2041 cgaccgaact gccttcagac ggcgtttgat ccgattcggc aacggttttg tccgtcgttt
     2101 ctttcatttt ttgcagggtc ggaatatcga ggcggtagag gtcggcgaag tggcggacga
     2161 ggtcttgggc gacaagctgt tcgatttgtt tttcacccaa gccgtcgatg tccatggctt
     2221 tgcgcgaggc gaagtggatt aagccttgcg cgcgttgtgc ctgacaaagc ataccgccgc
     2281 tgcatcgggc gacggcttcg ccttcttcgc gttcgatttc gctgcggcag atggggcaat
     2341 gggtcggcag gcggtagggc ttgtggagcg gaacggattg ggtttgatta gcggacggtg
     2401 tttcggcaaa caaatcgtcc tgccgatgcc cgatgccgtc tgaaacagca acggcggttt
     2461 cctgcatcgg gcggcgttca aaaatcacac gcacgacttc gggaatcacg tctccagcgc
     2521 ggcgcacgac gacggtatcg ccgacgcgca cgtcttttcg ggaaacttcg tcctgattgt
     2581 gcagggtggc gttggtaacg gttacgccgc cgacgaatac gggttgtaat cgggcaaccg
     2641 gcgttaccgc gcccgtcctg ccgatttgca cgtcaatcgc ttcgacaatg gtcagggctt
     2701 cttcggcagg gaatttgtgg gcaatcgccc agcgtggcgc gcgtgagatg aagccgagtt
     2761 cgcgctgttg cgccaagctg ttgactttga ccaccatacc gtcgatttcg tagggcagtt
     2821 cggggcgttt ttgctgcatt tgttcgtaaa acgccaatac ttcgtcgata tttttgaaac
     2881 agccgaaatt gccatttggc agactgaagc cgagtgcttg gaaataggcg agttcttgga
     2941 tgtgttcttc cgcgacgaaa ccgccttgct ggcgggcgac ggagtagggg aaaaagtgca
     3001 gtttgcgttg cgcagtgatg cgcgaatcga gttggcgcag gctgccggca gcggcgttgc
     3061 gcggattggc aaagggtttt tgcccgtttt cggcttgtct tttattgagg gcggcaaaat
     3121 cggctttttg catcagtact tcgccgcgta cttcgatgag ttcgggcgta ttttcgccgt
     3181 gcagccgcag ggggatgttg gcgacggttt tgatgttttg ggtaacgtct tcgcccgttg
     3241 tgccgtcgcc gcgcgttgcc gcctgtacca atacgccgtc gcggtagagc aggctgatgg
     3301 cgaggccgtc gaatttgggt tcgataacgt attcgggttt gccgccgtcc aaaccgtcgc
     3361 gcacgcgttg gtcgaaagcg tacatttcgg catggtcgaa cacgccgttt tcatcttgcg
     3421 gggaaaaagc gttggtcagc gacagcatcg gcacttcgtg gcgcacttcg gcaaatcccg
     3481 ctaaaggctc gccgccgacg cgctgggtcg gactgtcggg cagtttgagc tcgggatggt
     3541 ttaattccaa cgcttcgagc tcgcggaata atttgtcgta ttcggcatcg ggtacgctgg
     3601 gcgcgtcgag ggtgtagtat tcgtaggcat agcggttgag caggtcggtg aggtggcgga
     3661 tgtgttgtgc ggcaaattgt tttatatcac tatcagacgg tttaagaaga ttggtaaagt
     3721 tagtgttatg ttttgagttt ggattcatga gagaaggttt tcagacgacc tttgtctgat
     3781 acgggatgaa acgggcaaag gtcgtctgaa aaatgatagg ttgaaaacag ctgaatttta
     3841 cccgaaaaaa agcggatatg ccgtaacgac atatccgctt tgattgcatt cgattttagg
     3901 agaacaggcg caatgcggtt ttgccgcccg gttcgatacc gactttgagc atctcggact
     3961 gacgagccaa tacataagtg cgtacgtctt tgagccattg ggtcgaaact tcttccattt
     4021 tgtcgttgac cagattcagg ttcaactggc cggacaggcg taccgccaaa tccataaaca
     4081 aatcgtcgaa ggttttttcg cctgccggag agtgcgggat gtcgagcagc atactgaagc
     4141 ctttgtagga ctggttgtcc aaaagggcat tggtaaacgg ctcgttgttg agcgagcaga
     4201 tggagaacat ggtcgagccc gacgtgtcgg tatagtggaa cgcgccgtcg tcttccagga
     4261 cgaaacccac gcccgttacg gcggaacgca gttctacgcc gctgatgctg gtcggggaaa
     4321 ccaaatggat ggcgatggtc tggtcgacgc gcgcgcagaa tgcgtccagt gcggaagcca
     4381 cttcgataaa ggcggcaagg tcggtgtgca gcgtctgacc gcccatgctt tgtgcgaatg
     4441 cgtccacctg gcggttgaat gcggagagtt cttcctgcga ggcaagtccg ttgcggctga
     4501 ctgcctgaat acccacgata aatgcctgat agcggatgcc cgggatgggt tcggcaatct
     4561 ggaaatggtc gtccatggtg cagccgacaa tctggtagcg gcagcggttg gaaaggcgcg
     4621 gcagtgcgtg cagttctttg gcttcggtca gcgcgatata ggagatgaag tcgaagcgca
     4681 cgtcaaacca gggtaattcg acttttgaca gttctttgag cgtaatcagc ggttttgcag
     4741 gtgtttgcgg aacgggtgca ggttttgccg gcgcgtcggc aggtttcggt gcggaatgtc
     4801 cggtttgggg ttcggaaacg gtgtgggcgg agttgccgat aatgccgctt tcttccaagg
     4861 cggtttcgat ttcggttttg aacggggagg cttttgcctg tttctgcttg gcgatgtaga
     4921 cggcatcctg ttcttgcagg ttgcgcatgg cggggtcttg gggttttgcc gtttttttga
     4981 ccgccggttg gggtttcggc atcatgactg acccgccgga cggtttgccg tcgcggacat
     5041 ggctggtttt gctgttgagc agggcatctt tgtcggagtg tccgaactgg tcgcgcactt
     5101 ttttgcggta ttggttttcc tgatacatat tgtaggcgac aacggcgagg acggcggcga
     5161 ggaacagtac gatgtaaatc atggcaatca ctttaaattt cgggatgcag gatgcgcaaa
     5221 gtgcgggtac tgcggttaaa tcgggcttgc gtttccggca gtctgacgga acggccggct
     5281 ataacgtttg aattataacg aaaattgcag ggtctgacag cagtgtgtcg aaataagcgg
     5341 aaattttccg aaatgccgtc tgaaatctgt ggttttcaga cggcatttct gtccacggga
     5401 aaccctttcc cccgtatccg ccgccagtcg aaaaaatggc cggggtcggt tttgcggccg
     5461 ggcgcgatgt cttggtgccc cgttaccgcc gtgatggggt agcggcggca gagggctgcc
     5521 aacagcgttt cgagcgaacg gtattgcgct tcggtaaagg gttcgaaatc gcagccttcc
     5581 aattcgatgc cgatggaaaa tgcattgcat ttttccctgc cgccgaatga agacacgccg
     5641 gcgtggtatg ccatattgtc gcaggaaacg aactgtaccg tttctccgcc gcgtttgatt
     5701 aaaaaatggc tggatacgcg caaagtgtgt atcaggctga agaacggatg tccgtcgggg
     5761 tcgagccggt tggcaaacag cttttccacc gcatccgtgc cgtattcgaa cggcggcagc
     5821 gaaatgttgt gcaacacgat cagggaaacc gtttcccccg tttccctcgg gctgaaattg
     5881 ggcgacgggg tatggcgtat gctttgaagc cagccgtttt gccagtgtgc ttcggcgtga
     5941 ttgtccatga tgttcttcct gtccggcggg taatttgggt tatactgtcg cccgaatttt
     6001 aagacgtatt ccgaatgctg ggaatcctac catgttgaga aaattgttga aatggtctgc
     6061 cgtttttttg accgtgtcgg cagccgtttt cgccgcgctg cttttcgtcc ctaaagacaa
     6121 cggcagggca taccgaatca agattgccaa aaatcagggt atttcgtcgg tcggcaggaa
     6181 acttgccgaa gaccgcatcg tgttcagcag gcatgttttg acggcggcgg cctacgtttt
     6241 gggtgtgcac aacaggctgc atacggggac gtacagactg ccttcggaag tgtctgcttg
     6301 ggatatcttg cagaaaatgc gcggcggcag gccggattcc gttaccgtgc agattatcga
     6361 aggttcgcgt ttttcgcata tgaggaaagt catcgacgca acgcccgaca tcgaacacga
     6421 caccaaaggc tggagcaatg aaaaactgat ggcggaagtt gcccctgatg ccttcagcgg
     6481 caatcctgaa gggcagtttt tccccgacag ctacgaaatc gatgcgggcg gcagcgattt
     6541 acggatttac caaaccgcct acaaggcgat gcaacgccgc ctgaatgagg catgggaaag
     6601 caggcaggac gggctgcctt ataaaaatcc ttatgaaatg ctgattatgg cgagcctggt
     6661 cgaaaaggaa acagggcatg aagccgaccg cgaccatgtc gcttccgtct tcgtcaaccg
     6721 gctgaaaatc ggtatgcgcc tgcaaaccga cccgtccgtg atttacggca tgggtgcggc
     6781 atacaagggc aaaatccgta aagccgacct gcgccgcgac acgccgtaca acacctacac
     6841 gcgcggcggt ctgccgccaa ccccgattgc gctgcccggc aaggcggcac tcgatgccgc
     6901 cgcccatccg tccggcgaaa aatacctgta tttcgtgtcc aaaatggacg gcacgggctt
     6961 gagccagttc agccatgatt tgaccgaaca caatgccgcc gtccgcaaat atattttgaa
     7021 aaaataaacc atgccgtctg aaaagtttgt gttttcggac ggcataccct taccggaact
     7081 gcaagcatga aaccgcaatt catcactttg gacggcatag acggtgccgg caaatccacc
     7141 aaccttgccg tcatcaaggc atggtttgaa cggagggggc tgcccgtgct gttcacgcgc
     7201 gagccgggcg gaacgccggt cggtgaggcc ttgcgcgaaa tcctgctcaa ccctgaaacc
     7261 aaagccggtt tgcgtgcgga aacactgatg atgttcgccg ccagaatgca gcatattgaa
     7321 gacgtgatat tgcctgcact ttcagacggc atccatgtcg tgtccgaccg ttttaccgat
     7381 gcaaccttcg cctatcaggg cggcgggcgg ggaatgccgt ctgaagacat tgaaattttg
     7441 gaacattggg tgcagggcgg tttgcgcccc gatttgaccc tgctgttgga tgtgccgctg
     7501 gaagtgtcga tggcgcgtat cgggcagacg cgcgagaaag accggttcga gcaggaacag
     7561 gcagatttct tcatgcgtgt gcgcagcgtt tatctgaacc gtgccgccgc ctgtcccgaa
     7621 cggtacgcca ttatcgacag taaccgcagc ttggatgaag tcagaaacag catagaaaaa
     7681 gtgttggacg gacatttcgg ctgttgatgc ggcaaatatt gaaacaagcg catccgcccg
     7741 cgccgaaaat caaacggcag tgccacaggt gaaaatggcg gtatgcgcca aactttcggc
     7801 atgatagaat tacgcttagt tacaaggcag gatgcgtcgg caatattaac gaaccgcccg
     7861 taacccaatg tctcgaaagt gtttcggaca gtccgattca aatctttttc tcgcaacagg
     7921 attgacacat ggaaaactca ttgaaagaag ccgccctcaa gttccacgaa ttacccgttc
     7981 cgggcaaaat ttccgttacc ccgaccaaat ctctggcgac cgacaaagat ttggcgttgg
     8041 cgtactctcc gggcgtagcc gctccttgta tggaaatcca tgccgatccg caaaatgcct
     8101 acaaatacac cgccaaaggc aacttggtcg ccgtcatttc caacggtacc gcagtgttgg
     8161 gtttgggcaa catcggcgca ttggccggta aacctgtaat ggaaggcaaa ggcgtattgt
     8221 tcaaaaaatt cgccggcgtt gacgtattcg atatcgaaat cgatgaaaaa gacccgcaaa
     8281 aattggtaga catcatcgct tctttggaac cgactttcgg cggcatcaac ctcgaagaca
     8341 tcaaagcgcc tgagtgcttc tacatcgaac gcgaattgcg caaacgttgc aaaatccctg
     8401 tattccacga cgaccaacac ggtaccgcca tcattaccgc tgccgccgta ttgaacgcct
     8461 tgcgttatac cggccgcaaa attgaagaag caactttggt gtgctccggt gcaggtgctg
     8521 cagcgattgc ttgcttgaac caattgctgg atttgggtct gaaacgtgaa aacgtaaccg
     8581 tctgcgactc aaaaggcgtg atttacaaaa cccgcgaaga caaagatcgc atggatgagt
     8641 ctaaacagtt ctacgccatt gaagacaacg gccagcgcgt attggccgat gcggttaaag
     8701 gcaaagacat cttcttgggt ctgtccggcg cgaacctgct gacccccgaa atgttgaaca
     8761 cgatgaacga aaaacccatc gtgttcgcta tggccaaccc gaatccggaa atcctgccgc
     8821 cgctggcaaa agaaacccgt ccggacgtgg ttatcggtac cggccgctca gatttcccga
     8881 atcaagtaaa caacgtattg tgcttcccat tcatcttccg tggcgcgttg gatgtcggcg
     8941 cgaccaccat caacgaagaa atgaaacgcg cctgcgtgta tgctttggcg gatttggcga
     9001 tggaagaagt gaccgaagaa gtggttgccg cttacggtaa gaaatttgaa ttcggcgcgg
     9061 aatacctgat tccgactccg ttcgattccc gcctgctgcc gcgcgttgct acggctgccg
     9121 ccaaagcagc gatggaaagc ggcgtggcaa cccgtccgat tgcagatttg gaagcttacg
     9181 ctgccaagct gagcgaatgg aagctgtaag ccgtttgcgg tttaaaatgc cgtctgaact
     9241 gttttcaggc ggcattttgc tgtcagattg atatagtgga ttaacaaaaa tcaggacaaa
     9301 gcgacgaagc cgcagacagt acaaatagta cagaaccgat tcacttggtg tttcagcacc
     9361 ttagagaatc gttctctttg agctaaggcg agccaacgcc gtactggttt ttgttaatcc
     9421 actataaatg aaagatactg gaaaatgaaa gagatgaaac ctgtccgtta tcatattggc
     9481 gatatgcccg agacttcaaa acaaaccgcc tcccgtcatg acgacagggc agtgggtgtt
     9541 gacgatgatt gttttcatga ttcctttggt caatttttgt ttgggtgttc ggcagaggca
     9601 acccgaaccg cgccaatttc tgtaaagcgc agttgcttat ttacctgatt ggttcgctta
     9661 tcggtttggt cttcgcgttg tttataggtg ggtctgtatc gggtacgcat gattaatgac
     9721 ccgggctgat tttgcttcga ggatttgtat cgaatatgcc gaattgtttc aaatttcata
     9781 ccgttatcga acggcattgg caaaaacctt atccggtttt gtcttttctg cttaagccgc
     9841 tctccgggct gtttgccaaa attgcggcaa aacggcggac ggatttttta tcgggaaaac
     9901 ggcaaagcga aaagctgccc gtgcctgtgg tcgtggtcgg caacatccat gccggcggta
     9961 caggaaaaac gccgattgtt gccgcgctgg tgtcgggttt gcaggaaaaa ggtgtcaagg
    10021 tcggcatcat cagccggggc tacgggcgca agagcaaggc ggttcatgta ttgaatgaga
    10081 agagccgggc ggaagatgcg ggcgatgagc ctttgctgct gttccgcaaa accggcgcgc
    10141 cgacggcggt gggcagcagc cgtgcagagg caggcagggc gttgctggcg gcgcatcccg
    10201 acatcggact gattgtggcg gacgacggtt tgcagcatta cgccctgcgg cgagatgtgg
    10261 aaatcgcggt gtttccggcg gcggatacgg ggcgcacgga tttggattta ctgcccaacg
    10321 gcagtttgcg cgaacctttg ttgcggctgg attcggtgga tgcggtcgtc gtcagcggcg
    10381 gcaaggcgga tgtgtcgttt atgccgtctg aaaatatgtt tcacagccgt atcgaagcgg
    10441 gacggattta ccgtttgaac aatccgtccg aaatactgga cacaggccgt ctgaaaaatc
    10501 aaaccgtcgt cgccgtggca ggtattgcca agccggcgcg ttttttcgat tcgttgcgga
    10561 atatgggcat taccgtgaag cgaaccgtcg cgctgcctga ccacgccgac atttcggcgg
    10621 cagatttgcc cgatgcggac gcggtcatta ttacggagaa agatgcggtc aaattttcag
    10681 acggcatttg caccgataat gtttgggtgt tgcccgtttg tgcgataatc gaacctgatt
    10741 tggcggcgtt tgtgttggag cggttggaag atgtaccgaa ggccgtctga aagcacggtt
    10801 tgggcggagt gattacggat ttgaataaga acgcctcgcg ccgtcattcc cgcgcaggcg
    10861 ggaatctaag tctcgaattt tcaggaatgc ctaggaggct tcagaaatcc caaatctccg
    10921 gatttccact tggacaggaa tgagaaaatc ggtcgtattt tttatctgca ttaatcattc
    10981 gttaaagtat tgaatattaa actgaaaacc ttgttattgc ccttcgccac gctggcattg
    11041 tgcaccaacg cttttgccgc cccgcccagc gacgcgtcgt tggcgcgttg gctggatacg
    11101 cagaattttg accgggatat agaaaaaaat atgattgagg gctttaatgc cggatttaaa
    11161 ccgtatgcgg acaaagccct tgccgaaatg ccggaagcga aaaaagatca ggcggcaaaa
    11221 gcctttaacc gctatcgtga gaatgttttg aaagatttga ttacgcccga agtgaaacag
    11281 gctgtccgca atactttatt gaagaatgcc cgtgagatat acacgcaaga agaaattgac
    11341 ggcatgattg ccttttacgg ttcgcctgtc ggtcagtccg tcgttgccaa aaatccgcgc
    11401 ttaatcaaga aatcgatgag tgaaatagca gtatcttgga ctgcattgtc agggaaaatc
    11461 gcgcgacatc atctgcccgc gtttacggaa gagttgcggc gcatcatctg cggcggtaaa
    11521 aatcccgatg cgggctgtaa acaagccgga caggttggga aaaggcatca gaaataaatg
    11581 atagccgtct gaaatattga agagggcatc cgattgattg aaccatcaaa cccgaaagca
    11641 accctatgga aaaaaaattc ttagacatcc tcgtctgccc cgttaccaaa ggcaggctgg
    11701 aatatcatca ggacaaacag gaattgtgga gccgtcaggc gaagcttgcc tatccgatta
    11761 aagacggcat tccctatatg ctggaaaacg aagcgcgtcc gttgggcgaa gaggaactcg
    11821 aagcatgacc gaattcgtcg tattgattcc ggcgcggctg gattcgtcgc gcctgcccgg
    11881 aaaagccttg gcggacatcc acggcaaacc gatggtcgtg cgcgttgccg aacaggcggc
    11941 aaaaagtaaa gctgtgcgcg tcgtcgttgc caccgaccat cccgatattc agacggcctg
    12001 tcaggcgcac ggcgtcgaag tcgtcatgac ttcaaaccgg cacgaaagcg gcacgacgcg
    12061 ccttgccgaa gcctctgccg cgctgaagct gccgccgcat ctggtggttg tcaacgtaca
    12121 gggcgacgag ccgctgattg cacctgaact catcgaccgc accgccgaag tactcgtcga
    12181 aaacaacgtc caaatggcga ccgccgccca cgaattgcac gatttcgacg aattgatgaa
    12241 tcccaatgcc gtcaaagttg tcctcgacaa aaaccgcaac gccatctact tcagccgcgc
    12301 cccgattccc tatccgcgcg atgcgatgcg tgcaggaaaa cgcgaaatgc cgtttgaaac
    12361 cgccgtcctg cgccatatcg gcatctacgc ctaccgcgcc ggcttcctgc aacgctatgc
    12421 cgaaatgagc gtttcgccgc tggaaaccat cgaatcgctg gaacagctgc gcgtcctgtg
    12481 gcacggctac ccgattgccg tcgaaaccgc caaagaagcc cccgccgccg gtgtggatac
    12541 gcaggaagat ttggataggg ttcgcgctgt atttcagact atataaaata gattcaaagg
    12601 gaaaagatat gcagcaacat attgaaaagt ggcaatactt gagccgggaa gaacagaaaa
    12661 tccttgccga agtatggggt ctcgtgcaaa acgatgatca ggaggttcac tatgaaatgc
    12721 ttaaattgaa cgcacccgac gaagccagtg gcgaattttg gttcagaatg gcagaaacac
    12781 tcagcaccct gccgcccaac cgttccctcg accttagaat gaacggcggc aggctggcga
    12841 ccgccgtatc catcctttcc gtcatgattg aagacaatcc cgacataccg cagctttggg
    12901 cgcaaaaaat taccgccctc aattatagtg gattaaattt aaaccagtac ggcgttgcct
    12961 cgccttgtcg tactatctgt actgtctgcg gcttcgtcgc cttgtcctga tttttgttaa
    13021 tccactatat ttggcacacg gacacaaagc ccgtgccgac ggtttggcac aacagcccga
    13081 caaagcggca gaagccaacg aggaggaata cctgaccaaa gccctgtcgc aaaacctgct
    13141 gtcaacattg gatgtcgcgc ttgcacgttt tcctgaagac gcgtggtttc aggaaatcaa
    13201 acaggatgca caaaagcatt ttgcttgagg atgtggcagt caggaatatt tccattcagg
    13261 aagaaaagaa gtgcctgatt gggtataatc agggtaaatc ttattttatt tcaaaagatt
    13321 aatatttgct ttccattttt ccttgacggt atcggaaaag ttgattatag ttacagcttc
    13381 cttaggagta atggctgaga ggctgaaggc acttccctgc taaggaagca tgtggggtca
    13441 acctgcatcg agggttcgaa tccctcttac tccgccagat aaaaaataga cgctgtgttt
    13501 tacagcgtct atttttttat gcaattttat agcgggttgg tgcaaaacca gtatggtatt
    13561 gccctgtctt gattctgaat tttgttatag tggattaaca aaaaccagta cggcgttgcc
    13621 tcgccttagc tcaaagagaa cgattctcta aggtgctgga gcaccaagtg aatcggctcc
    13681 gtactatttg tactgtctgc ggcttcgccg ccttgtcctg atttttgtta atccactata
    13741 atccgagatg cttgccgttt atttccgcct cgttcaaacg gcggctctga tttgcgtggt
    13801 ttctgtttgc cgtattcgcc tatccgtacc gcaaatgtta tactgggaaa aatttactga
    13861 ttgtgtttta tggcatattt gccgatagga tggaagagac aaatgagcag aatccggcag
    13921 gcttttgccg ctttggatgg cggaaaggca ttgattccct atattacggt gggcgacccc
    13981 gatattcgga caactttggc attgatgcac ggcatggttg caaacggtgc ggatattttg
    14041 gagttgggcg tgccgttttc cgatccgatg gcggatgggc cggttattca gcgtgcggcg
    14101 gagcgggcgt tggcaaacgg gatttcgctg cgcgatgtct tggatgtcgt cagaaaattc
    14161 cgtgaaaccg acacgcaaac gccggttgtt ttgatgggat atttgaaccc tgtacataag
    14221 atgggttatc gggagtttgc tcaggaagcc gcaaaggcgg gtgtggacgg cgtgttgacg
    14281 gtggattccc ctgtcgaaac catcgatccg ctctatcgcg agctgaagga taacggggtc
    14341 gactgtattt tcctgattgc gccgacgacg acggaagacc gtattaaaac cattgccgag
    14401 ctggcaggcg gatttgtcta ttatgtttcg ctcaagggcg taacgggcgc ggcaagtttg
    14461 gatacggatg aggtttcgcg taaaatagag tatttgcatc agtatatcga tattcccatc
    14521 ggtgtcggtt tcggcatcag caatgcggaa agtgcacgca aaatcggccg ggttgccgac
    14581 gcagttattg tcggcagccg gattgtgaaa gaaatcgaaa acaatacagg caacgaggct
    14641 gccgccgtcg gtgctttggt aaaagagttg aaggatgccg tgcgctgacg gcggttcctc
    14701 atcctgaata ttttaggagt tgtccatgag ctggttagat aaaatcctgc cacccaaaat
    14761 caagaatcgc ggaaaagacg gttcttccaa tgttcccgag ggtctatggc acaaatgccc
    14821 gtcttgttcg gcaaccgttt attctaccga gttgcagcag aacaatcagg tttgtccgaa
    14881 atgcaaccac cacaatccgt tgtcggcacg acaacgcctg aatctgcttt tggatgagga
    14941 tggcagagag gagattgccg gaaatgtcaa accgaccgat cctttgaagt ttaaagacag
    15001 caaaaaatat ccggatcgtt tgagtgcggc acgcaagctg accggggaag atgatgcttt
    15061 ggtggtaatg aaaggcaaga tgaacggtct gcccgtcgtc gttgccgcgt ttgaattccg
    15121 ctttatcggc ggttcgatgg gttcggttgt gggcgaacga ttcgtacaag gtatccgtcg
    15181 ggcggttgcc gacaattgtc cgttcgtctg tgtggcggct tccggcggtg cgcgtatgca
    15241 ggagggtgtg aactcattga tgcagatgac gaaaaccagt gccgcgctgc atttgctgac
    15301 ggaaaaacgc ctgccattta tatcggtgtt gaccgatccg actatgggcg gcgtatccgc
    15361 cagcttcgca tttttgggcg atgtcgtgct tgccgaaccg aacgcgctga tcggttttgc
    15421 cggtccgcgc gtgattgagc agacggtgcg cgaaacgctg ccggaaagct tccaacgcgc
    15481 cgagttcctg ctggaaaaag gcgcaatcga ccagattgtc gaccgccgcg atatgaagcg
    15541 gcgcatcagt gatttgatta cgctgttgtg ccgtcaggac aaagtttccg ccgcttgatg
    15601 gctgatgaat cgaataccgt ctgaaaccga tgtttcagac ggtatttttg tgtctggtta
    15661 tttgttgtgc ggctttatcg acggggcata gcgtccggca cgttctttca ggcgttgtac
    15721 caaacctttc gtgtcggcgg gtacaccgcc ctcgcagaat gcctgataca ggacggtgcg
    15781 cagtgcgtcg ttgcggctta atgtaccgcc tatcggtttc cattcggcgt ttcggggctg
    15841 tatccagcgg cggttgaccg tgtcgccgta gccgaacact ttataggagg aaggtttgcc
    15901 gttgccgaac ctgatggaga agcgggcgca gaatatgcct tcggcagtca ggttgtcgta
    15961 gcctttgtcg gagcggatat tgagaatgta gcggatgctg ccgtcgggcg cgggcataat
    16021 ttgcaggctg tcgagcagga ttttcggctg tttgccgtaa ttttcatcca cataaatgtc
    16081 gaaccagccg tccgagtgcg tatcgggcag cggcggcagt ttggcggtat gttctttaaa
    16141 ttcgcgggcg gcggcctctt cgggcgtttc gcggtagcgg gtgttgatcg gcgtgtcttt
    16201 ttggctgaag ccggcagcga gggacgtgcc ggcggcgagt gcgagcagca ggagggcggt
    16261 gcggcgcata agtttctcca aattgaaaac ggcgttattt tatgggttgg caaagggggc
    16321 tgcaagcaac tggggtataa tctccccccg attcccattt tttaaacggt acaaacgatg
    16381 aacagcgaaa ctttagacgt aaccggattg aaatgtcccc tgccgatttt gcgggcgaaa
    16441 aaggctttgg cgcaaatgca gcagggcgac gtgttgaccg ttctggcaac cgacggcggc
    16501 gcaccggggg attttgaggc tttttgccgc caaaccggtc atgtgctgtt ggatgcttcc
    16561 gaacaggacg gcgtgttcac gctggtcgtc caacacaaat aaatgccgtc tgaaatgcgg
    16621 atgtcccgat tgatgttatt gctgtcggca tttgtgcttg ctgcgtgtaa tgcccaaaac
    16681 cggcaatccg gtgtacggca tcaggatttc gcgcgtgtag ccgtcgattt gtttcggagt
    16741 gcctgcgtcc tgactcaagg cagttttgaa tcggtttcca agtttgccgc tgtcggacat
    16801 tttgtccctg tcggaaagga agacctgtcc catctgccgc ccactgttgc agaacccgat
    16861 gtacaggcgt tgtggacgct tgaacgcgat ggcggcattt attatttgag cctgacgcgc
    16921 gacagttgca gtgtgaaagc cgagcgggca gacagtgccg cgctgttgga acattttgac
    16981 ggacttgtcc gacagccgcc gaaaaatgcc aatatagaat tgagggcgga acagtcggtg
    17041 caggcatcat ttgaaatccg ccaagtcagc tatgcctggc gggaagcggg cagctccgaa
    17101 gaaaccgtat tgaccgcaca aaccgccgat tccccggatt tacccgtaca ggcagttttg
    17161 aacctgacgc accgttccca caacgggaaa cccctaattc tcccctaact tcagacggca
    17221 taaagtcggc atgccgtctg aacattcaaa taaaacaaag gaaaaccatg caaaccctga
    17281 ccattatccg ccccgacgat atgcacctgc acctgcgcga cggcgacgcg ctcaaagccg
    17341 ttgctcctta taccgcccgc caaatggggc gtgccgtcat tatgcccaac ctcaaaccgc
    17401 ctgtcgtcag cgttgccgac gcgcttgcct acaaagcgcg catcatggcg gcattgcccg
    17461 aaggcagcgc gtttgagccg ttgatgacgc tttacctgac cgaccaagcc acgcctgcac
    17521 ttgtgcgcga agccaaagcc gccggcatcg tcgccttcaa actctaccct gccggcgcga
    17581 ccaccaattc cgattccggc gtaaccgacc tgttcaagct catccccgtg ttggaagaaa
    17641 tggcgaaaca gggcattttg ttcctcgttc acggcgaagt aaccgacccc gaaatcgaca
    17701 tcttcgaccg cgaagccgcc tttatcgggc gcgtgatgaa acccgttttg gcgcaagtgc
    17761 cgaatcttaa agtcgtgttc gaacacatca ccaccgccga agccgcccgc ctggttttgg
    17821 aagcaggcga caacgtagcc gccaccgtta ccccgcaaca cctcctgctc aaccgcaacg
    17881 acctcttggt cggcggcgtg cgcccccatc atttctgcct gcccgtactc aaacgcgaaa
    17941 cccaccgtca ggcattggtt gccgccgtta ccggcgagaa ggcgcataaa ttcttcctcg
    18001 gcaccgactc cgcgccgcac gccaaatccg ccaaagaaaa cgcctgcggt tgcgccggta
    18061 tgttcagcgc gatgaccgcc atcgagcttt atgccgaagt gtttgaaaaa gcaggcgcgt
    18121 tggacaaact cgaagccttc gcctcgaaaa acggcgcaag gttttacggc attcctgaaa
    18181 ataccgacac gatcaccctc gtcaaacaaa gccaaaccgt ccccgcaagt attccctacg
    18241 gcgacggcga acttgtcccg atgcgcgcgg gcggcgaaat cggctggacg gtacagtatt
    18301 gatggggctg gaaacaaaat gccgtctgaa aggtttttca gacggcattt gtgttgttga
    18361 ctgattgata cgtcaacggc gtttgagttt gttacgtttc ggttatttcc gataaattcc
    18421 cacaattttc aaatttcgcc attcccacga aggcaggaat ccagaaattc gatgcgacca
    18481 aagtttatca aaaacggcag caactcaaaa aaccggattc ccgcctgcgc gggaatgacg
    18541 agattgaagt ttcagaattt atttgaaata cccaaaattc aaaaaaccaa attcccacct
    18601 gcgtgggaat gacgaaacaa agaaagcaga aataaggaca tagaactttc tttaaatttg
    18661 tgatgcatca acggcgtttg ggctcgtcgg ggcggatttg ggcggcgagt ttgtcgagga
    18721 tgccgttgac gaatttgtgc ccgtccgtgc cgccgaaggt tttggtaact tcgatggctt
    18781 cgttgatgat gacggggtag ggtgtttcgg gcatggcgga cagctcgtgg caggcggtca
    18841 gcaggacggc gcgttcgatg ggattgaggt ctttttcgtc gcggtcgagc agggggcgga
    18901 ttttttggat gtagtccgct gcgttggttt gcgtaccgaa gaaaagtttg ttgaacaatt
    18961 cttcgtccgc tttggcaaag tcgggcattt cgcggatgtt tttagcaatt tcgggcgcgg
    19021 cggtgcggtt gataagggat tggtaaacgg cttgtacggc aagctcgcgg gaacggcggc
    19081 gggctgtttt catgattttt ccttgaaacg gttgggcggc acggtatgcc gtctgaaacg
    19141 gaaagggcgt attggtgtac gccctgtttg ttattcttcg tcttcaaact gttcttcgag
    19201 cagcaggttg acgaggttgg cgcattcgac ggcgactttg gcggcatccg aggctttttc
    19261 ttcaatccgt tcgattgcct gcgcgtcgtt ttcggtggtt aggacggcat tggcaatcgg
    19321 gatgttgtag tcgagtgcga cgcggctaac ccctgctccg gattcgttgg aaaccagctc
    19381 gaaatggtag gtttcgccac ggatgacgac accgatggca atcagtgcgt caaacttttc
    19441 ggaagaggca aggttcatca gtgcgatggg gatttcaagt gcgccgggta cggtggcgac
    19501 ggtaatgttt tcgtctgcca cgcccaattc ttggagggtg cggcagcaga ctttgagcat
    19561 ttcgctgccg atttcgttgg tgaaacgtgc ctgtacgatg ccgatgcgga ggtgtttgcc
    19621 gtcgaggttg ggggcgatgg tgttcattgg gtgtcctttg gtattcggag gtttcggaat
    19681 gccgtctgaa ggtttcagtc ttgcggctgc cagtcggcga cggtttggaa tgtgccgtct
    19741 tcggcaagct cccatgcgct gccttcgggt tgggaaagca gtgcggcggt ttcagggttg
    19801 gttttggcga tgtcggcgag gctgacgatg ctgaagttgt cgggatcgtc ggtgtattcg
    19861 tcggtctcgt cgccgctgaa gaaacgccag ccgctgtcgt tttcaaaaac gggggcttcg
    19921 cggtagagga agccgacggg ccggttttgt ttggcgacgg tgttggtggc gatacagcgg
    19981 tcgagtgccg aggaaagtgc ttgtgcaaat gcgttcatta cgggaatacg ttgggggaaa
    20041 acttacggat tttaccacga ttcgtgcgtt gtcggcagac ggcggcggtt tggtggtaca
    20101 atgtgcgccg tttgcagcct taaggtgttt ctgtattttt ggagtatgga aacgcattcg
    20161 ggctgttttt tgcggaagac ggtaatgaaa gacgatgttt tgaaacagca ggcacacgcg
    20221 gcgatacaga agagactggg ctacgcgttc cgcgatattt cgcttttgcg gcaggctttg
    20281 acgcacagga gccatcatgc gaagcacaac gagcggttcg agtttgtcgg tgattcgatt
    20341 ttgaattata cggtggcgcg gatgctgttt gacacgtttc cgaagttgac cgagggcgag
    20401 ttgtcgcggt tgcgggcaag tctggtcaat gagggcgtgc tggcggaaat ggcggcggaa
    20461 atgaatgtcg gcgacggtct gtacttgggg gcgggcgagt tgaagagcgg cggcttcaga
    20521 cggccttcga tactggcgga cgcgatggag gcgatgtttg cggcggtcag cttcgatgcc
    20581 gatttcaaca cggcggaaaa ggtggtgcgc catttgtttg ccgaccgcgt ccggtgtgcc
    20641 gatttccaaa atcaggcaaa agacggcaaa actgctttgc aggaggcgtt gcaggcacgc
    20701 cgctttgctt tgccgaaata ccgtatcgaa gagcaaatcg gccatgccaa cgacagtatg
    20761 tttgtggttt cctgcgattt gggcgaactg ggtttcgtgt gccgtgccaa agggacgagc
    20821 cgcaaggcgg cggaacagga ggcggcgaaa gaggctttga aatggctgga agagaagctg
    20881 ccgctgaaga agaaaaagaa atgaggcggc gcgtgaatat gccgtctgaa atgtggatat
    20941 gaaagcgaat atggatattg aaaccttcct tgcaggggaa cgcgccgccg gcggataccg
    21001 ttgcggcttc gtggcgattg tcggtcgtcc gaacgtgggc aaatcaacgc tgatgaacca
    21061 tctcatcggt cagaaaatca gcatcaccag caaaaaggcg cagacgacgc gcaaccgcgt
    21121 aacggggatt tataccgacg ataccgcgca gttcgtgttt gtcgatacgc ccggctttca
    21181 aaccgaccac cgcaacgcgc tcaacgacag gctgaatcaa aacgttaccg aggcgcttgg
    21241 cggcgtggat gtggtggttt tcgtcgtgga agcgatgcgc tttaccgatg ccgaccgtgt
    21301 cgtgttgaaa caactgccca agcacacgcc ggtcatttta gtggtcaaca aaatcgacaa
    21361 ggacaaggcg aaagaccgtt acgcgctgga ggcgtttgtt gcccaagtgc gcgccgaatt
    21421 tgaatttgcg gcggcggagg cggtcagtgc gaaacacgga ttgcggattg ccaacctgtt
    21481 ggagctgctc aagccgtatc tgcccgaaag cgtgccgatg tatcccgaag atatggttac
    21541 ggacaaatcg gcgcgttttt tagcgatgga aatcgtgcgt gaaaaattgt tccgctattt
    21601 gggcgaggaa ttgccttatg cgatgaacgt cgaagtggag cagtttgaag aggaagacgg
    21661 tttgaaccgc atctatatcg ccgttttggt cgataaggaa agccaaaagg cgattttaat
    21721 cggcaaaggc ggggagcgtt tgaagaaaat ttccaccgaa gcgcggttgg atatggaaaa
    21781 actgtttgat accaaagtat ttttgaaggt ctgggtcaaa gtcaaatccg gttgggcgga
    21841 cgacatccgc ttcctgcgcg agctgggttt gtagtttttc ttgctgaact ttacgcaaat
    21901 gccgtccgaa caggtttcag acggcatttt gtttcaatcg ggaatatctt tgttaaaaac
    21961 gggttgatat tatctg
//
LOCUS       DAWKJW010000014        21523 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.014, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000014 DAWKJW010000000
VERSION     DAWKJW010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21523)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21523)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21523
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.014"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(79..1965)
                     /gene="uvrC"
                     /locus_tag="WJJ54_000434"
     CDS             complement(79..1965)
                     /gene="uvrC"
                     /locus_tag="WJJ54_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEZ7341340.1"
                     /translation="MPSEAVFQMIDMNTENRSPEQFDIPLFLKNLPKLPGVYRFFDEG
                     GKVLYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVHHIETTITRSEAEALILENNFI
                     KALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKKPNQYFGPYPNSNAVRDSIQ
                     VLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVGHISEEDYHDSVREAATFLNGK
                     TDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIMQSNQFIDSKNPNNPNDIDLLA
                     LAVSDGLVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQDYAEAFVSQHYLGKSKPDI
                     IISNFSVPDALKEALEGEHGKQMQFVTKTIGERKVWLKMAEQNAQMAIAQRRLQQSSQ
                     QHRIDELAKILGMDSDGLNRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
                     AKPGDDYAAMREVLTRRYGKMQEAEANGETVKWPDAVLIDGGKGQIGVAVSVWEELGL
                     HIPLVGIAKGPERKAGMEELILPFTGEVFRLPPNSPALHLLQTVRDESHRFAITGHRK
                     KRDKARVTSSLSDIPGVGSKRRQALLTRFGGLRGVIAASREDLEKVEGISKALAETIY
                     NHLH"
     gene            complement(2029..4191)
                     /locus_tag="WJJ54_000435"
     CDS             complement(2029..4191)
                     /locus_tag="WJJ54_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HEZ7341341.1"
                     /translation="MQQKIRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQ
                     VVFDDSKTSVADIAKIIEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLFTINVPFLIG
                     MAGMMIGRHDWMIPPLWQFALASVVQLWLAVPFYKSAWASIKGGLANMDVLVTIGTVS
                     IYLYSVYMLFFSPHTAHGMAHVYFEAGVMVIGFVSLGKFLEHRTKKSSLNSLGLLLKL
                     TPTQVNVQRDGEWKQLPIDQVQIGDLIRANHGERIAADGIIESGSGWADESHLTGESN
                     PEEKKAGGKVLAGALMTEGSVVYRATQLGSQTLLGDMMNALSEAQGSKAPIARMADKA
                     AAVFVPTVVGIALLTFIVTWLIKSDWTVALMHAVAVLVIACPCALGLATPAAIMVGMG
                     KAVKHGIWFKDAAAMEEAAHVDAVVLDKTGTLTEGRPQVAAVYCVPDSGFDENALYRI
                     AAAVEQNAAHPLARAIVSATQVRGLEIPTAQNAQTVVGAGITAEVEGAGLVKAGKAEF
                     AELTLPKFSDGVWDIASIVAVSVDNKPIGAFALADALKADTAEAIGRLKKHNIDVYIM
                     SGDNQGTVEYVAKQLGIAHAFGNMSPRDKAAEVQKLKAAGKTVAMVGDGINDAPALAA
                     ANVSFAMKGGADVAEHTASATLMQHSVNQLADALSVSRATLRNIKQNLFFAFFYNILG
                     IPLAALGFLNPVIAGAAMAASSVSVLSNALRLKRVKID"
     gene            4330..5280
                     /gene="trxB"
                     /locus_tag="WJJ54_000436"
     CDS             4330..5280
                     /gene="trxB"
                     /locus_tag="WJJ54_000436"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEZ7341342.1"
                     /translation="MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMT
                     TTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFTLKGDMGEY
                     TCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEA
                     LYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNG
                     ALLKNNDGSEQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNI
                     EGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI"
     gene            5436..5804
                     /gene="rpsF"
                     /locus_tag="WJJ54_000437"
     CDS             5436..5804
                     /gene="rpsF"
                     /locus_tag="WJJ54_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEZ7341343.1"
                     /translation="MRHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGR
                     RQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPM
                     LGGEKAKNLLSGASEEAVAQ"
     gene            5805..6107
                     /gene="priB"
                     /locus_tag="WJJ54_000438"
     CDS             5805..6107
                     /gene="priB"
                     /locus_tag="WJJ54_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HEZ7341344.1"
                     /translation="MGFNNLVSLAALIEKVFPIRYTPAGIPVLDIILKHESWQEENGQ
                     QCLVQLEIPARILGRQAEEWQHRQGVYVHVEGFLAQKSRRSLMPMLRIQNIQEYKG"
     gene            6114..6344
                     /locus_tag="WJJ54_000439"
     CDS             6114..6344
                     /locus_tag="WJJ54_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEZ7341345.1"
                     /translation="MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPAR
                     ITGTKAFYQRQLAVAVKRARFLALLPYTDQHK"
     gene            6361..6813
                     /locus_tag="WJJ54_000440"
     CDS             6361..6813
                     /locus_tag="WJJ54_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEZ7341346.1"
                     /translation="MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANM
                     KEFEARRAELEAKQAEILADARVRQEKLDGQTVTVAQKAGVDGRLFGSVTNADIAAAI
                     VAAGIEAVKANVRLPNGPLKAVGEYEVEVALHTDAVAKITVAVVAATE"
     gene            6827..6934
                     /locus_tag="WJJ54_000441"
     CDS             6827..6934
                     /locus_tag="WJJ54_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HEZ7341347.1"
                     /translation="MPSETLPIVGMWFQTVFVLFSVYSAKIGMVVFIVD"
     gene            complement(7601..8407)
                     /locus_tag="WJJ54_000442"
     CDS             complement(7601..8407)
                     /locus_tag="WJJ54_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ7341348.1"
                     /translation="MWHWDIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQG
                     LAQHPYAQHLAVGTSFAVMVFTAFSSMLGQHKKRAVDWKTVFAMMPGMIFGVFTGALS
                     AKYIPAFGLQIFFILFLTAVAFKTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGI
                     GGGSLSVPFLIHCGFPAHKAIGTSSGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLY
                     LPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIMLLLIAGKMLYNLL"
     gene            complement(8408..9154)
                     /gene="pssA"
                     /locus_tag="WJJ54_000443"
     CDS             complement(8408..9154)
                     /gene="pssA"
                     /locus_tag="WJJ54_000443"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEZ7341349.1"
                     /translation="METPTNTPQRSLRQNSIYLLPNSFTIAALFSAFYAITQSMHGRY
                     ETAAIAVFISMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQ
                     FGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVE
                     KFPAVHWWALGITLFAGLSMIVQIPFWSFKEINIRRQVPFVGMLLAVLLLLLVTWEPS
                     LVLFLFFLGYSLSGYIMAARRFWKKYRKAD"
     gene            9737..10219
                     /locus_tag="WJJ54_000444"
     CDS             9737..10219
                     /locus_tag="WJJ54_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HEZ7341350.1"
                     /translation="MMKKILAVSALCLMTAAARAADTYGYLAVWQNPQNADDVLQVKT
                     TKEDSTKSEAFAELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVALAYPKALGAMR
                     VENAVVITSPRFTSVHQVALNQCIKKYGAQGQCGLETVYCTSSSYYGGTVRSLIQNLK
                     "
     gene            complement(10271..11482)
                     /locus_tag="WJJ54_000445"
     CDS             complement(10271..11482)
                     /locus_tag="WJJ54_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
                     /protein_id="HEZ7341351.1"
                     /translation="MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTL
                     LFQITTKRKVPIFLGSSFAFIAPIIYSVGEWGLPSTMFGLFAAGFMYFVFAALIRWRG
                     LAAVHKLLPPVVIGPVIMVIGLSVAVAASSMAMGQADGKQVIDYTDSLILSGFTFAVT
                     AIVSVFGSRMMKLIPILIGVASGYVLALLMGLVDTASIAHAPWFAVPHFETPQINWQA
                     ALFMLPVAVAPAIEHIGGIMAIGNVTGKDYTKDPGLDKTLAGDGLGVCVAGLIGGPPV
                     TTYGEVTGAVMITKNSNPVIMTWAAVFAVCMAFFGKFNAFLASIPMPVMGGIMLLLFG
                     TIASLGVKTLIDAKVDLMLPKNLVIVSSVLTTGIGGMTLKLGSFSFAGVGLCAVLAIV
                     LNSLLPDPKES"
     gene            11705..14143
                     /locus_tag="WJJ54_000446"
     CDS             11705..14143
                     /locus_tag="WJJ54_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HEZ7341352.1"
                     /translation="MTEKSHKKTAKGRAGSPSPTSARNKKADNGARGNKVSERLKAVK
                     ELQKTETKKARPEHVVNLIGDALWLMGLAATLYLAISLISFDMGDPSWSHSSPVVEDV
                     ANWGGLFGAYVADVGYYLFGWSFWWWIAAACVVLYKNFRLHAKQTENEAYNHKIAAAA
                     LFVLTVFSPVLEYFVLGGKYADSLPVGAGGMVGIRVGAVFAWLLGKSGSLLIILVVLL
                     LSLSLLVQISWLEFLNGAGRAVQNRLSALSGKVMALGKRRPNTKTDGVDTQNTRRMVK
                     EAKNITAKPVALPEGSSSNRKSVAVSVAPPPKIQVSLFEDDEPRQAGEYHKPTLNLLR
                     IPDSEPVSINPAELERTAELIESKLAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQ
                     IVALSKDLARSMSLQSVRIVETIAGKNTMGIELPNDKRQDVMLSEILSSPVFAEAKSK
                     LTVALGKDIAGTPVVGDLAKMPHLLVAGMTGSGKSVGVNGMIMSMLFKATPDEVRFIM
                     IDPKMLELSIYDGIPHLLCPVVTDMREAGQALNWCVAEMEKRYRLLSHAGVRNLEGFN
                     QKVEAAKAAGKPLLNPFSLNPDEPEPLEKLPLIVVVIDELADLMMTERKAVEQQIARL
                     AQKARAAGIHMIVATQRPSVDVVTGLIKANIPTRMAFTVQSKIDSRTILDQMGADELL
                     KYGDSLFLQPGSAEPTRLQGAFVSDDEVHQVVNYVKSQAPADYIEGLLSGEAALETAN
                     IVNPNADSDELFDQAVAYVLESKKTSISSLQRQLRIGYNRAANLMEALENAGVVSSTD
                     LNGSRKILAHKDHL"
     gene            14351..15661
                     /locus_tag="WJJ54_000447"
     CDS             14351..15661
                     /locus_tag="WJJ54_000447"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEZ7341353.1"
                     /translation="MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGF
                     RPGKAPLKMIAQMYGASAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDDKE
                     SFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAR
                     NGDRVIIDFEGKIDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNF
                     PEDYHGKDVAGKTAVFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVS
                     REVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAANL
                     DLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEEQVKAVVANFAESYEDPQEVIDWY
                     YAEPSRLQAPTSLAIESNVVDFVLGKAKVNEKALSFDEVMGAQA"
     gene            15757..16371
                     /gene="clpP"
                     /locus_tag="WJJ54_000448"
     CDS             15757..16371
                     /gene="clpP"
                     /locus_tag="WJJ54_000448"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEZ7341354.1"
                     /translation="MSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDES
                     ANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAAS
                     MGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLM
                     AKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQILENRASLQF"
     gene            complement(16427..17692)
                     /gene="ispG"
                     /locus_tag="WJJ54_000449"
                     /gene_synonym="gcpE"
     CDS             complement(16427..17692)
                     /gene="ispG"
                     /locus_tag="WJJ54_000449"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEZ7341355.1"
                     /translation="MNTLQRRKTHQVRIDHITVGSEAPVVIQSMTNTDTADAKATALQ
                     IKKLSDAGSEMVRITVNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPE
                     CGKALSKYRINPGNVGKGVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMD
                     ANLASSAPKPPEEVTKEALIVSALESAEKAVLLGLPEDKIILSCKVSAVQDLIQVYRE
                     LGSRCAYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEV
                     VVGQEILQTMGLRSFTPMVTACPGCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGV
                     ESLNVAVMGCVVNGPGESKLADIGISLPGTGETPVAPVYVDGERKVTLKGDNIATEFL
                     AIVEEYVKTNYGENGSKRNQNKIIPIQSL"
     gene            complement(17708..18469)
                     /gene="pilW"
                     /locus_tag="WJJ54_000450"
     CDS             complement(17708..18469)
                     /gene="pilW"
                     /locus_tag="WJJ54_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HEZ7341356.1"
                     /translation="MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAM
                     EYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD
                     SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA
                     EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK
                     IAKALGNAQAAYEYEAQLQANFPYSEELQTVLIGQ"
     gene            complement(18472..19566)
                     /gene="rlmN"
                     /locus_tag="WJJ54_000451"
     CDS             complement(18472..19566)
                     /gene="rlmN"
                     /locus_tag="WJJ54_000451"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEZ7341357.1"
                     /translation="MKTNLLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFDE
                     MTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTRKWLLDVGTGNGVETVFIPESDRGT
                     LCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVM
                     MGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMVPQMDRLRDVMPVALAVS
                     LHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHAR
                     ELIELVTDVPCKFNLIPFNPFPNSGYERSSNENIRVFRDILQQAGFVVTVRKTRGDDI
                     DAACGQLAGQVQDKTRRQQKWQQILIGQQG"
     gene            complement(19710..20135)
                     /gene="ndk"
                     /locus_tag="WJJ54_000452"
     CDS             complement(19710..20135)
                     /gene="ndk"
                     /locus_tag="WJJ54_000452"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEZ7341358.1"
                     /translation="MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTL
                     KEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPAEAAEGT
                     IRADFATSVSINAVHGSDTPENAALEIAYFFSQTEICPR"
     gene            complement(20194..21345)
                     /locus_tag="WJJ54_000453"
     CDS             complement(20194..21345)
                     /locus_tag="WJJ54_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AFG1 family ATPase"
                     /protein_id="HEZ7341359.1"
                     /translation="MSNRDQLFKAPPFENHSPLTWYQAASQLPNFIRDDAQAAAIEHL
                     DRLWTELMMFKRKRNRFLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKR
                     RVHFHAFMAEIHQRLKTLKSESNPLKSVAAEIAKETRVLCFDEFHVSDIADAMILGRL
                     LENLLNEGVVLVATSNYAPSELYPQGQNRSSFLPTIALIESSLTVLNVDGGEDYRLRT
                     LRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESGRAIWFDF
                     RALCFGPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFRVKLCA
                     TGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLEQPHLTLSPKASGG"
BASE COUNT         5184 a         5320 c         5832 g         5187 t
ORIGIN      
        1 aatttaatcc actatatatc ggtataccga cctgctgtat catatttttt acagacggat
       61 tttgtctttg acagcatgct aatgcagatg attgtaaatc gtttccgcca atgccttgct
      121 gatgccttcc actttttcca agtcctcgcg gctggcggca atcacgccgc gcagaccgcc
      181 gaagcgggtg agcagggctt ggcggcgttt gctgcctacg ccggggatgt cgcttaagga
      241 ggaggtaacg cgggctttgt cgcgtttttt gcggtgaccg gtaatggcga aacggtgcga
      301 ttcatcgcgt acggtttgca atagatgcaa ggccgggctg ttgggcggca ggcggaagac
      361 ttcgccggta aaaggcagta tgagctcctc cataccggct ttgcgctccg ggcctttggc
      421 aatgccgacc aaagggatgt gcagcccgag ttcttcccat accgatacgg ctacgccgat
      481 ttgccctttg ccgccgtcaa tcaacacggc atccggccat ttgacggtct cgccgttggc
      541 ttcggcctcc tgcattttgc cgtaacggcg cgtcaacact tcgcgcatgg cggcgtagtc
      601 gtcgccgggt ttggcggtcg tgatgttgta gcggcggtat tgcgaaggct ggatgttttg
      661 ctcatcgtac acaacgcagg acgcaatagt ggcttcgcct tgtgtgtggc tgatgtcgaa
      721 acattcaagg cggttgaggc cgtctgaatc catgccgagg atttttgcca gttcatcaat
      781 gcggtgttgc tggctgcttt gttgcaggcg gcgttgtgca atcgccattt gtgcgttttg
      841 ttccgccatt ttcaaccaga ctttgcgttc gcctatggtt ttggtgacaa attgcatctg
      901 cttgccgtgt tcgccttcca aagcctcttt cagcgcatcg ggaacggaaa agttgctaat
      961 aatgatgtcg ggtttgcttt tgcccaaata atgttgggag acgaaggctt cggcgtaatc
     1021 ttgtccgttt ggctcgggat cgtttttggt gtcggggaaa aagcttttat cgcctacatg
     1081 ccgtccgccg cgtatgctga cccagtgtac gcagacgagg ccgtctgaaa cggcgagcgc
     1141 gagcaggtcg atgtcgttgg ggttgttcgg gtttttgctg tcgatgaact ggttgctctg
     1201 cataatgccg agtgcttgga tttggtcgcg gtagcgggcg gcttcttcaa attgcagatt
     1261 agcggcggcg gtttgcattt tgtgttgcag ggtacgcgtc agttcgtcgg ttttgccatt
     1321 gaggaaagtt gctgcttcac gcacgctgtc gtgataatct tcttcgctga tatgaccgac
     1381 acaaggtgcg gtacagcgtt tgatttggta aagcagacaa ggacggtcgc ggtgctcgaa
     1441 tacactgtct tcgcaggtac gcagcataaa gactttttgc aacacttgaa tactgtcgcg
     1501 cacggcgttg ctgttgggat acgggccgaa atattgattt ggctttttca gtgtgccgcg
     1561 gtaatacgcc atttgcggat attgatggcc actgagcatc aaataaggat agcttttgtc
     1621 atcgcggaaa agaatattgt atttcggcga cagagcttta atgaagttgt tttcgagaat
     1681 cagtgcttcg gcttcggaac gcgtgatggt ggtttcgata tgatgcacct gttttaccat
     1741 caatgcgatg cgcggcgaat ggtcgttttt ttggaaatag ccggacacgc gccgcttgag
     1801 gttgaccgct ttgccgacgt ataagacttt gccgccttcg tcaaaaaaac ggtacacgcc
     1861 cggcagcttg ggcaggtttt tgaggaagag cgggatgtcg aattgttccg gagaacggtt
     1921 ttctgtattc atatcaatca tttgaaaaac ggcttcagac ggcatattac catatcgctg
     1981 gaggcagcct tatccgttcg gacaaggctg cagggcggtt acatgctgct aatcgatttt
     2041 tacccgtttc aggcgcaagg cgttgctcaa cacggaaacc gagcttgccg ccattgccgc
     2101 gcctgcgatg acagggttta aaaaaccgag cgcggcaagc ggaatgccca aaatattgta
     2161 gaagaaggcg aaaaacaggt tttgcttgat gtttctcaac gtcgcccgcg ataccgatag
     2221 ggcatcggcg agttggttga ccgaatgttg catcagcgtg gcggatgcgg tgtgttcggc
     2281 aacgtctgcg ccgcctttca tcgcgaagct gacgttggcg gcggcgagtg cgggcgcgtc
     2341 gttgatgccg tcgccgacca tcgccacggt tttgccggcg gctttgagtt tctgtacttc
     2401 ggcggctttg tcgcgcggac tcatgttgcc gaaggcgtgt gcgatgccca gttgtttggc
     2461 gacatattcg accgtacctt ggttgtcgcc gctcataata tagacatcga tattgtgttt
     2521 tttcagacgg cctatggctt cggcggtatc ggctttcaat gcgtcagcaa gtgcgaatgc
     2581 accgataggt ttgttatcga ctgagactgc aacaatgctt gcaatgtccc aaacgccgtc
     2641 tgaaaatttc ggcaaggtca gttcggcaaa ttcggctttg cctgctttca ccaatcccgc
     2701 gccttccact tcggcagtaa tgcctgcgcc gacaacggtt tgcgcgtttt gtgcggtagg
     2761 aatctccaaa ccgcgcactt gggtggcgga aacgatggct cgggcaagcg gatgggcggc
     2821 gttttgttcg acggcggcgg cgatgcggta caaagcattt tcatcaaagc cgctgtcggg
     2881 aacgcaataa acggcggcaa cctgcggcct gccttcggtc agcgtgccgg ttttgtccaa
     2941 cacgacggca tcgacgtggg cggcttcttc cattgctgcc gcgtctttaa accaaatacc
     3001 gtgtttcacc gccttgccca tgccgaccat aatcgcggcg ggcgtcgcca gaccgagcgc
     3061 gcacgggcag gcaatcacca aaacggcaac ggcgtgcatc agcgcaaccg tccaatcgct
     3121 tttaatcagc caagtaacaa taaaagtcaa cagcgcaatg cccacgacag ttggcacgaa
     3181 caccgccgcc gccttgtccg ccatgcgcgc aatcggtgct ttgctgcctt gcgcttcgga
     3241 tagcgcgttc atcatatcgc cgagcagggt ttggctgccg agttgggtgg cgcggtaaac
     3301 cacgctgcct tcggtcatca gtgcacctgc caacactttg ccgcctgcct ttttctcttc
     3361 agggttggat tcgccggtaa gatggctctc atccgcccag ccgctgccgc tttcgataat
     3421 gccgtcggct gcaatgcgtt caccgtggtt ggcgcggata aggtcgccga tttgtacttg
     3481 gtcgatggga agctgtttcc attcgccatc gcgttgcacg ttcacttggg tcggtgtaag
     3541 tttcaaaagc aggcccaagc tgttcaggct ggattttttt gtgcggtgtt ccaaaaattt
     3601 gcccagcgac acaaaaccaa tcaccatcac gcccgcttca aaatacacgt gcgccatacc
     3661 gtgcgccgtg tgcgggctga aaaacagcat ataaacggaa tacaggtaaa tcgagaccgt
     3721 gccgatggta acgagtacgt ccatattcgc cagcccgcct ttaatgctcg cccacgcgct
     3781 tttgtaaaat ggcaccgcca gccaaagttg caccacactc gccaatgcga actgccacaa
     3841 cggcggaatc atccaatcgt gtctgccgat catcatcccc gccatgccga taaggaacgg
     3901 gacgttgatg gtgaacagca gccacagccg ccagccgata tggtgttctg cttcgggttg
     3961 cggcaatgta tcttccgttt tttccttcgc gccgtaaccg gttttctcaa tgattttggc
     4021 aatgtcggct actgaggttt tgctgtcgtc aaacactacc tgcgcctctt cgctggcgaa
     4081 gtttaccccc gccgattcga caaaatcttt tttgttcaac actttttcaa tgcgcgaagc
     4141 gcaggcctgg caggtcatgc cttcgatttg gaaacggatt ttttgttgca taagcgtgat
     4201 tcctgctttg atattcagac ggcagttaag gctgcgggat gccgtctgag cgccggtatg
     4261 gtcgaaattt ctcaaacgcg ccgataattc gagtagaatc cgaaaacttg acacagcaaa
     4321 ggaaaaacaa tgtcccaaca ccgcaaactg attattttgg gttccggccc cgccggatac
     4381 accgccgccg tctatgccgc gcgcgccaat ttaaaccccg tcattattac aggtatcgcg
     4441 caaggcgggc aactgatgac caccaccgaa gtggacaact ggcctgccga tgccgacggc
     4501 gtgcaagggc cggaattgat ggcgcggttt ctcgcccacg ccgaacgttt cggaacggaa
     4561 atcatttttg accaaatcaa cgccgtcgat ctgcaaaaac gcccgtttac actcaaaggc
     4621 gatatgggcg agtacacttg cgatgccctg attgtcgcaa caggcgcgtc cgccaaatac
     4681 ctcggtttgc cgagtgagga agcgtttgca ggaaaaggcg tttccgcttg tgccacctgc
     4741 gacggtttct tctacaaaaa ccaagatgtt gccgtagttg gcggcggcaa tacggcagtt
     4801 gaggaagcac tctaccttgc caatatcgcc aaaaccgtta cgctgattca ccgccgcagc
     4861 gagttccgtg ccgaaaaaat catgattgac aaactgatga aacgcgtgga agagggcaaa
     4921 atcatcctca agctggaaag caatctgcaa gaagtactgg gcgacgatcg gggcgtaaac
     4981 ggcgcattat taaaaaacaa cgacggttct gagcaacaaa ttgccgtcag cggcatcttt
     5041 atcgccatcg ggcacaagcc gaataccgat attttcaaag gtcagttgga aatggacgaa
     5101 gccggttacc tgaaaaccaa aggcggcacg gcggacaatg tcggcgcaac caatatcgaa
     5161 ggcgtatggg cggcgggcga cgtaaaagac catacctacc gtcaggcaat taccagcgcg
     5221 gcttccggct gtcaggcggc tttggacgcg gaacgctggc tgggcagcca aaacatttga
     5281 atgccgtctg aaaccgaaat tttcggcgga atgcaagttt ttcgcaccaa atccttgatt
     5341 ccgtcggcaa accccaatat aatgcccgtt ctttgaacct tgccttctgc tttcgcatgg
     5401 cagaaggctg tttttaccat ccataaggag ataacatgcg tcattacgag atcgtgttta
     5461 tcgttcatcc tgatcaaagc gagcaagtgc ccgctatggt tgaacgttac aaaaccatga
     5521 ttgctgaagc aaacggtaag attcaccgtt tggaagattg gggtcgccgc caactggctt
     5581 acccgattaa caaaatccat aaagcccatt acgttttgat gaacatcgaa accactcccg
     5641 aagtggttga agagctggaa accgcattcc gcttcaatga tgccgtattg cgccatctaa
     5701 ccatcaaaac caaacacgcc gttaccgaag catcccctat gttgggtggt gaaaaggcta
     5761 agaacctgtt gagcggtgcg tctgaagaag cggtcgccca ataattggga ttcaataatc
     5821 ttgtttcgct tgccgcgtta attgaaaagg ttttccctat tcgatatacg cctgccggaa
     5881 tccctgtttt agatattatt ttaaagcacg aatcgtggca ggaggaaaac gggcagcaat
     5941 gccttgtcca attggaaatt ccggcacgga ttttaggcag gcaggcggaa gagtggcagc
     6001 atcggcaagg tgtatatgtt cacgtcgaag gttttttagc tcaaaaaagc agacgttccc
     6061 ttatgccgat gctcaggata caaaatattc aagaatataa aggttaaacg acaatggctc
     6121 gtcaatcatt caaacgtaga aaattctgcc gtttcacggc tgaaaaaatc caagaagtcg
     6181 attacaaaca agttgatttg ctgaaagact ttatctctga aaacggtaaa atcattcctg
     6241 cacgcattac agggacgaag gcattctacc aacgccaatt ggctgttgcc gtaaaacgcg
     6301 cacgcttcct ggctctgctg ccttacaccg accaacacaa ataattttgg agattgaatc
     6361 atgcaaatta ttctgttaga aaaaatcggc ggtctgggca acttgggcga catcgtaacc
     6421 gttaaaaacg gctacgcccg caactttcta attcccgcag gtaaggcaaa acgtgcgacc
     6481 gaagcgaata tgaaagagtt tgaagcacgc cgtgccgaat tggaagccaa acaggctgaa
     6541 attttggcag atgcccgagt ccgtcaggaa aaattggacg gtcaaaccgt taccgttgct
     6601 caaaaagccg gtgtggacgg ccgcctgttc ggttccgtta ccaatgccga cattgctgct
     6661 gcaatcgttg ctgccggcat cgaagccgtg aaagcaaatg tacgtctgcc gaacggtcct
     6721 ctgaaagccg ttggcgagta cgaagtggaa gtggctttgc acactgatgc cgttgctaaa
     6781 attaccgttg ccgtcgttgc cgcaaccgag taattgaaat tatcagatgc cgtctgaaac
     6841 cctgccgatt gtcggaatgt ggtttcagac ggtatttgtt ttgttttccg tatattctgc
     6901 aaaaatcggg atggttgttt ttatagtgga ttaaatttaa accagtacag cgtacctggc
     6961 ttcaatatac tcaataggat aggtctcttc ctaaccgaaa aaataattgt cttttccctt
     7021 gcaaataatt gaaatcaaca gattactaaa acacagccaa aatattcaat tgacaaaaac
     7081 ttttctgatt ttgagaaatc tgtgaaaatc aggggattat ttattttgaa aatggtatcg
     7141 ggcataaaat ttggctgtgt ttcaatatgg tgctgataac atactttgtt tcaaaatgtt
     7201 caataggata acttcctgat tgaccgaaaa ataatggcct tttcccttgc aagcagttga
     7261 aatcaacaga ttgtcaaaat acatcctaaa aatttaataa cttatatata tgattgcaaa
     7321 ggttacggct tgtatgccgg tcattatggc ggaaataccg tttgggaggc agccgcatcg
     7381 cgtggaatcg gcacggcagg cgatgcgccg atgccttcgg gcgtgaaggc ggggcaatcg
     7441 gcagtttgga aaaaggcaat ggaatctgtg ggcagaagaa gttaagggta aaagtcgggc
     7501 gcacggtcag gttgtctgtc cttttgtcgg aacaggagac tgggcagctt tgtcctaatt
     7561 aattgcttgt gcaaacggta aaaaggtttt ttcgtgtgtt ttaaagcagg ttgtacagca
     7621 tttttccggc aatcaaaagc aacataatgc cgaaggattt tttgagtttg gcagaagaaa
     7681 gtttgtgagc ggttttgaca ccgagcgggg caaaggcaat ggttgccgcg ctgaggacgg
     7741 cgacggcggg caggtaaagg aagcccagtg acccttcggg caatcctgca atattcaggc
     7801 cgttgagcag atacgatatt gcgccggaga gtgcaatcgg ccaggcaagg ccggatgatg
     7861 tgccgatggc tttatgggcg gggaagccgc agtggattaa gaaggggacg gaaagtgaac
     7921 cgccgcctat gccgacccag ctcgacattg tgccgaacag tgtggaaacc gcagtcagtc
     7981 cgggcagtcc gggcagcggg cgggatgccg tctgagggtc ggtatgcagt gttttgaatg
     8041 cgacggcggt taaaaacagg atgaagaaaa tttgaagccc gaacgcgggg atatattttg
     8101 cggagagtgc gcccgtgaat acgccgaata tcatacccgg catcatcgca aatacggttt
     8161 tccagtcgac cgcccgtttt ttgtgctgcc ccaacatact ggaaaaggcg gtgaagacca
     8221 tgacggcgaa ggatgtgccg acggcgaggt gttgcgcgta aggatgttgt gccaaaccct
     8281 gcaaatcaag tacccataaa acgacaggga caatcagcgt gccgccgcct acgccgaaca
     8341 gaccggcaat aaaacctgcc gcactgccta cggcaagcag gattaagata atgtcccaat
     8401 gccacattta atccgccttt ctgtattttt tccagaatcg gcgtgccgcc ataatgtagc
     8461 cggacaggct gtatccgaga aagaacagga agaggacgag cgacggttcc caagtgacca
     8521 gaagcagcaa taagacggca agcagcattc cgacaaaggg gacttgtctg cggatgttga
     8581 tttctttaaa actccaaaaa gggatttgga caatcatcga caggccggca aacagtgtga
     8641 tgcccaatgc ccaccagtgg acggcgggga atttttcgac gctgtggttg acccaaatca
     8701 gcccgacaat cagcgcggcg gcagtcggac tgggcacgcc gataaaccag cgtttgtcca
     8761 ccttgccgat gagcgtgttg aacagggcga ggcgcagggc ggcgcaggcg cagtagatga
     8821 aggcgacgga ataaccgatt ttgccgaact gccaaagctg ccatttgtag gcaataagcg
     8881 cgggggcaac gccgaagctg accatatcgg caaggctgtc gagctgctcc ccgaacgcgc
     8941 tttggctgtt ggtcagccgc gccacgcgcc cgtccatacc gtccagcaac atagagatga
     9001 ataccgcgat ggcggcggtt tcataacgtc cgtgcatgga ttgggtgatt gcgtaaaatg
     9061 cggaaaacag cgcggcgatg gtaaaggagt tgggcagcag gtagatactg ttttgacgca
     9121 gggagcgttg cggggtgttg gtcggggttt ccatagctga agtgtctcac ggacgtggag
     9181 aatcgatagg ggattataac ccaaaccatt atcgaacaat acgcccttta ggatgaagcc
     9241 ctcggaggcg gtttgttttt ctgatggcgg atgctttgcg gggcggtttg actctgcctg
     9301 ccaccgggtg tgttgtttcg gatttttgcc ggatggatat tgttgccggg catttctggg
     9361 cttgccggaa ggtatcgggg ggagggcatc ggaatatgcg gtgcgccgtt caaaccgggg
     9421 cggcgtttcc ctattttcag ggagttgcag gtttcaacaa attgaaagat attttttgca
     9481 tttccgaccg tatgctgatt ttgaaacggg ataaattata ggacaaggtt tttcgcccgc
     9541 cgcaaaggtt ggccgcaatg ccgtctgaaa acaacggctt gccgctaagg cggcggtatg
     9601 cggatttgcg ctgccgaaat cggtttgcca tacccggcgg tgcaatctgc ggggagggat
     9661 aagccgataa ggcgggactt atcctgtttt ttgtttataa tgcaacagaa tttggacgaa
     9721 ccgtcgggaa tttatcatga tgaaaaagat actggccgta tcggcactat gcctgatgac
     9781 tgcggcggca cgggctgccg atacttacgg ctatctcgcc gtttggcaga atccgcagaa
     9841 tgcggacgat gttttgcagg ttaaaactac aaaagaagat tcgacgaaaa gcgaagcgtt
     9901 tgccgagttg gaagcctttt gcaaaggtca ggacacgctt gcgggcattg ccgaagacga
     9961 gccgaccgga tgccggtcgg tcgtgtcgct gaacaatacc tgtgtcgcgc tggcataccc
    10021 gaaagccttg ggcgcgatgc gcgttgaaaa cgccgttgtg attacttctc cgcgttttac
    10081 gagcgttcat caggtcgcac tcaaccagtg catcaaaaaa tacggcgcac agggacaatg
    10141 cggcttggaa acagtgtatt gcacgtcttc ttcttattac ggcggaactg tgcgctcttt
    10201 gattcaaaat ctcaaataaa acggaaaatg ccgtctgaaa gatgttcaga cggcatttcc
    10261 atatcgacgg tcaggattct ttcggatcgg gcagcaggct gttcaacaca atggcaagta
    10321 cggcgcacaa gcccacgccg gcaaagctga agctgcccaa tttgagcgtc atgccgccga
    10381 tgcccgtggt cagtaccgag ctgacgatga ccaggttttt cggcagcatc aaatcgactt
    10441 tggcatcaat cagcgttttc acgcccaaag aagcaatcgt gccgaacagc agcagcataa
    10501 tgccacccat cacgggcatc ggaatggaag ccaaaaacgc attgaatttg ccgaaaaacg
    10561 ccatgcagac ggcaaaaacc gccgcccaag tcatgatgac agggttactg tttttggtaa
    10621 tcatcaccgc acccgttact tcgccgtagg tcgtaaccgg cgggccgccg atcagaccgg
    10681 caacgcacac gcccaaaccg tcgcccgcaa gggttttgtc caagcccggg tctttcgtat
    10741 agtctttccc cgtcacattg ccgattgcca tgatgccgcc gatgtgttcg atggcggggg
    10801 cgacggcaac gggcagcata aacagtgcag cctgccagtt gatctgaggc gtttcaaaat
    10861 ggggaacggc gaaccagggc gcgtgtgcaa tgcttgccgt gtccaccagt cccatcagca
    10921 gtgccaaaac ataacccgaa gcgacaccga tcaagatggg aatcagcttc atcatcctgc
    10981 tgccgaaaac cgatacgatg gcggtaacgg caaaggtaaa gccggaaaga atcagcgaat
    11041 cggtatagtc gatgacctgt ttgccgtccg cctgacccat tgccatgctg cttgccgcca
    11101 cggcaacaga cagaccgatg accatgatga cggggccgat gacgaccgga ggcagcagtt
    11161 tgtgtaccgc tgccagtccg cgccaacgga tcagcgcggc aaacacaaaa tacataaagc
    11221 cggcggcaaa cagtccgaac atggtggaag gcagccccca ttcgccgacg gagtagataa
    11281 tcggtgcgat aaaggcaaac gaagaaccaa gaaaaatcgg cactttgcgt ttggttgtga
    11341 tttggaacag cagcgttccc aagcctgcgc ccaaaagcgc aagagccgga ttcagaccgg
    11401 tcagcagggg aaccagcacc attgcgccga atgccacaaa taaaatctgt gcaccggaaa
    11461 cggcaagttt cagttggttc ataccatctt ctttcaatcg gttcaaacgg cacggattat
    11521 actggtttgc cgagggtctg cgtaaaaata catatggcgg gcaacagata tgccgtctga
    11581 aaggcaatgt ctgtctgttg caggatgaaa gcaggagaaa tggagtataa tccgacactt
    11641 tccatattca atccgcaagc cgtccggctt ccttatttca gacggcattt tccggtaata
    11701 cggcatgaca gaaaaatccc ataaaaaaac agcaaaaggc agggcgggaa gcccgtcccc
    11761 aacgtccgca cgcaacaaga aagccgacaa cggcgcacgg ggcaataaag tttccgagcg
    11821 gctcaaggcg gtcaaagagt tgcagaaaac cgaaaccaaa aaggcgcgtc ccgaacatgt
    11881 cgtcaacctt atcggcgacg cactgtggct gatgggtttg gcggcaaccc tgtatttggc
    11941 gatttccctg atcagtttcg atatgggcga tccgtcttgg tcgcacagtt cgccggttgt
    12001 ggaagatgtc gccaattggg gcggactgtt cggcgcgtat gttgccgatg tcggctatta
    12061 tcttttcggc tggtcgttct ggtggtggat agcggctgcc tgcgtcgtgc tgtataaaaa
    12121 tttccgcctg cacgcaaaac agacggaaaa cgaggcatac aaccacaaaa tcgctgccgc
    12181 cgcgctgttt gtcctgacgg tcttcagccc cgtcttggag tattttgtgc tgggcggaaa
    12241 atatgccgac tccctgcctg tcggagcagg cggtatggtc ggcatacgcg tcggcgcagt
    12301 gtttgcgtgg ctgctgggga aatcgggcag cctgctgatt atcttggttg ttctgctgtt
    12361 gtcgttgtcc ctgctggtgc agatttcatg gctggaattt ttgaacggtg cgggcagggc
    12421 ggttcaaaac cgcctgagtg ccttatccgg caaggtcatg gctttaggaa aacgccggcc
    12481 gaataccaaa acagacggtg tcgataccca aaatacacgg cgcatggtaa aagaagccaa
    12541 gaatattacg gccaaacccg ttgccttgcc cgaaggcagc agcagcaacc gcaaatccgt
    12601 cgcggtttcc gtcgcgccgc cgcccaaaat tcaggtttct ctgtttgaag atgacgaacc
    12661 tcggcaggcg ggcgaatacc acaagcctac attgaaccta ttgcggattc ctgacagcga
    12721 acccgtcagc atcaatcccg ccgaattgga gcgcactgcc gaactgatcg aatccaaact
    12781 ggcagaattc ggcatcggcg tacaagtcgt atccgccaca tccggccccg tcatcacgcg
    12841 ctacgaaatc gaacccgcgc aaggtgttaa aggcagccaa attgttgcct tgtcgaaaga
    12901 tttggcacgc tctatgtcgc tgcagtccgt gcgtatcgtc gaaaccatcg caggtaaaaa
    12961 cacgatgggc atcgagttgc ccaacgacaa acgccaagac gtgatgttga gtgaaatctt
    13021 gtcctcgccc gtgtttgccg aagccaaatc caagctgacc gtcgcgctgg gcaaagacat
    13081 tgccggtacc cccgttgtcg gcgacttggc gaaaatgccg caccttttgg tcgccggtat
    13141 gactggttcg ggcaagtccg tcggcgtgaa cggcatgatt atgtctatgc ttttcaaagc
    13201 tacgcccgac gaagtccgct ttatcatgat agacccgaaa atgcttgagt tgagcattta
    13261 cgacggcatt ccgcacctgc tctgcccggt tgtaaccgat atgcgcgaag cagggcaggc
    13321 gttgaactgg tgcgtcgccg aaatggaaaa acgctaccgc ctgctttccc atgccggtgt
    13381 gcgtaatttg gagggcttca accaaaaagt cgaagccgca aaagcggcag gcaagccgct
    13441 gctcaatccg ttcagcctga accccgacga gcccgagccg ctggaaaaac tgccgttgat
    13501 tgtggtcgtt atcgacgaac ttgccgacct gatgatgacc gaacgcaaag ccgtcgagca
    13561 gcaaatcgcc cgtctcgccc aaaaagcgcg cgccgccggt atccatatga ttgtcgccac
    13621 ccaacgtccc agtgtcgatg tcgttaccgg cctgattaaa gccaacatcc cgacgcgtat
    13681 ggcgtttacc gtgcaaagca aaatcgacag ccgtaccatc ctcgaccaaa tgggcgcgga
    13741 cgaactgctc aaatatggcg attcgctgtt cctccagccc ggcagtgccg aaccgactcg
    13801 cctgcaaggc gcgtttgttt cagacgacga agtacatcaa gtcgtcaact acgtcaaatc
    13861 gcaagcccca gccgactata ttgaaggtct gctcagcggc gaggccgcgc tggaaactgc
    13921 caatatcgtt aatccgaatg cagacagcga cgaattgttc gatcaggcag tcgcctatgt
    13981 tttggaaagc aaaaaaacct ccatttcgtc tttgcagcgg cagctgcgca tcggctataa
    14041 ccgcgcggca aacctgatgg aggcactgga aaatgcgggt gtcgtttctt ccaccgacct
    14101 caacggcagc cgtaaaattt tggcgcacaa ggaccatttg tagcccgtat tgcaaaatgc
    14161 cgtctgaacg gcggaattgg cgtttcagac ggcatattat gtttcaggcg aaacattgtg
    14221 atatacttgc cagctaaaat ttcccctttg cggcaatgcg gttcaaatat cgtaccgttg
    14281 cgctgtttgc ttccccatgt agggaagaaa gtttatcatt ttatcaacac aacaaattta
    14341 agggcttatg atgagcgtaa ctgttgaaac tttagaaaat ctggaacgca aagtagtgtt
    14401 gtccctgcct tggtccgaaa tcaacgcaga aaccgataaa aaactgaaac aaacccaacg
    14461 ccgtgcaaaa atcgacggtt tccgtccggg taaagcacct ttaaaaatga ttgcccaaat
    14521 gtacggtgcg agcgcacaaa acgacgtgat caacgagctg gtgcaacgcc gcttctacga
    14581 tgttgccgtt gcccaagagt tgaaagtggc aggcttcccc cgttttgaag gcgttgaaga
    14641 acaagacgat aaagagtctt tcaaagttgc cgccattttt gaagtgttcc ccgaagtcgt
    14701 tatcggcgat ttgtctgcac aagaagttga aaaagtaacc gcttccgtcg gtgatgccga
    14761 agtggaccaa accgtagaaa tcctgcgcaa acaacgcacc cgcttcaacc atgtcgaacg
    14821 cgaagcccga aacggcgacc gcgtcatcat tgactttgaa ggcaaaatcg acggcgaacc
    14881 ttttgccggc ggcgcatcca aaaactacgc cttcgtattg ggcgcaagtc aaatgctgcc
    14941 tgaatttgaa gccggcgtag tcggcatgaa ggctggcgaa agtaaagacg ttaccgtcaa
    15001 tttccctgaa gactaccacg gtaaagacgt tgccggtaaa actgccgtgt tcaccattac
    15061 gctgaacaac gtttccgaag cgactctgcc tgaagtcgat gcagattttg caaaagcctt
    15121 gggtattgcg gatggcgacg ttgccaaaat gcgcgaagaa gtgcagaaaa acgtaagccg
    15181 cgaagtggaa cgccgcgtaa acgaacaaac caaagaatcc gtaatgaacg cgctgctcaa
    15241 agccgtagag ctgaaagcac ctgttgcttt ggtcaatgaa gaagccgcac gcttggcaaa
    15301 cgaaatgaaa caaaattttg ttaaccaagg tatggctgat gctgccaact tggatctgcc
    15361 tttggatatg ttcaaagaac aagccgaacg ccgcgtgtct ttgggtctga ttttggccaa
    15421 actggttgat gaaaacaaac tggaaccgac tgaggagcaa gtcaaagccg ttgtcgccaa
    15481 cttcgcagaa agctacgaag atcctcaaga agtaatcgac tggtactacg cagagccttc
    15541 ccgcctgcaa gccccgactt ctttggcgat agaaagcaac gtcgttgatt tcgttttggg
    15601 taaagccaaa gtaaacgaaa aagctttgtc ttttgacgaa gtgatgggcg cgcaagcctg
    15661 attatcctga aaatgccgtc ttagggcagt ttttgaaagc accgaagccg cttttaaagc
    15721 ccgctttggt gcttttacat catgaaagga gacgaaatgt cttttgataa ctatcttgtc
    15781 cctaccgtta tcgagcagag cggtcgcggt gagcgtgcat tcgatatcta ttcccggctt
    15841 ttgaaagagc gcatcgtatt cttggtcggc ccggtaaccg acgagtccgc caatctggtg
    15901 gttgcccaac tgttgttttt ggaaagtgag aatccggata aggatatttt cttctatatt
    15961 aactcgccag gcggttcggt aaccgccggt atgtcgattt acgacaccat gaattttatc
    16021 aagcccgatg tatcgacttt gtgcttgggg caggcagcaa gtatgggcgc gttcttattg
    16081 tcggcaggcg aaaaaggcaa acgtttcgcc ctgcccaaca gccggattat gattcaccag
    16141 cctttaatca gcggaggctt gggcggtcag gcatccgata ttgaaattca cgcacgcgaa
    16201 ctgttgaaaa tcaaagaaaa actcaaccgc ctgatggcga aacattgcgg ccgcgatttg
    16261 gcagatttgg agcgcgacac cgaccgtgat aatttcatgt ccgccgaaga ggctaaagaa
    16321 tatggtctga ttgatcaaat cttggagaac cgtgcttctt tacagtttta ataagaaatc
    16381 tgagagaaac aaatgccgtc tgaaaacagt tcagacggca tttgtcttat agggactgta
    16441 ttgggatgat tttgttctgg ttgcgtttgg agccgttttc gccgtagttg gttttgacat
    16501 actcttcaac aatagccaaa aattccgttg caatgttgtc gcctttcagt gtgactttgc
    16561 gctccccgtc cacataaacc ggcgcgacgg gtgtttctcc cgtaccgggc aggctgatgc
    16621 cgatgtcggc caatttgctt tctccgggcc cattgacaac gcagcccatt acggcaacgt
    16681 tcagggattc aaccccggga taaagggtac gccatataga cattttttgg cgcaggtaat
    16741 tttgaacatc ttgtgccagc tcttgaaata cggtactggt ggtacgcccg cagccggggc
    16801 aggcggtaac catcggcgta aacgaacgca atcccatagt ttgtaaaatc tcttgcccga
    16861 cgacgacctc ctgagtacgc gggctgccag gttccggagt cagtgaaatg cggatggtgt
    16921 cgccgattcc ttcttgaagc aagacggata atgccgccgt tgatgcgaca atgcctttgc
    16981 tgcccatacc ggcttcggtc aaacccaaat gcagcggata ggcgcaacgg ctgcccagtt
    17041 cgcggtaaac ctgaatcaaa tcctgaaccg cgctgacttt gcacgacagg atgattttgt
    17101 cttcgggcag tcccaataga acggcttttt cggcagattc caaagcggag acaatcagtg
    17161 cttccttcgt cacttcttcg ggcggtttcg gcgcggaaga agcgaggttg gcatccatca
    17221 tacgtttggc gaggctttga tccaaagaac cccagtttac gccgatgcgg acggctttat
    17281 cgttttcagc agcagtccga atcataaagg caaatttttc atcgcctttt acgcctttgc
    17341 cgacattgcc gggattgatg cggtatttgg acaatgcttt gccgcattcg ggaaattccg
    17401 ccaacaggcg ttcgccgttg aagtggaaat cgccgataag tggtgtggca tagcccatat
    17461 cgtccaagcg gcggcggatt tcggcaactt tggacgcggc ttcggggctg ttgacggtaa
    17521 tacgcaccat ttcggatccg gcatcgctca atttcttaat ctgcaatgcg gtggcttttg
    17581 catcggcagt gtcggtgttg gtcatagatt ggataacgac gggtgcttct gaaccgacgg
    17641 taatatgatc gatgcggact tgatgcgtct tgcggcgttg gagtgtgttc atatggtttg
    17701 aatctgttta ttgaccgatg aggacggttt gcaattcttc cgagtagggg aaattcgcct
    17761 gcaattgtgc ttcatattcg tatgccgcct gtgcgttgcc gagggctttg gcaattttcc
    17821 agcctagcag caaatcatcg gcctgaagga cttctaccct gctttggtat tttttaaagt
    17881 agtaatcggc atcgcccaac tgcccggcca gcattttggt gcgcgccagt tctttaaatg
    17941 cgggtgggaa ctgcggctgg gcggcgaggg aacgtttcaa ataggcttcc gccaatccga
    18001 attgcccctg ttttgcgctg catatgcctt tattcaggtt ggcaatataa ggggtcgggt
    18061 aggtggggtc ggccagggct ttgtcgaaat atgccataga ttcggcaggg cggttgagcc
    18121 tgccgcacag gaaccagccg tagttgttgt tgatttcggc actgtcgggt ttgatggaga
    18181 gggcttgccg gaaactttcc tgcgccttgt cgttaacttt caggtattga tagatttcgg
    18241 cacggaccag ccaggcaagc tcgtttttag ggtctgattt caaggcgtct tcaatacttg
    18301 ccgtcgcctg acggtagtcc tgaccgcgca tatattccat tgccaactgg gttttgatat
    18361 tggaaacctg attggctttt tctgcccgcg aggggcggta ggaagtgctg cacgcgccca
    18421 aggcaaggac aagtaataaa gagattcgtt tggatggctt aaaaggcata attacccctg
    18481 ttgtccgatt aaaatctgct gccatttttg ttggcggcgc gttttatcct gaacctgccc
    18541 cgccaactgt ccgcaggcgg catcgatgtc gtcgccgcgc gtttttcgta cggtaacgac
    18601 aaatcctgcc tgctgcaaaa tatcgcggaa cacacggatg ttctcattgc tggagcgttc
    18661 gtatccggag tttgggaagg gattgaacgg aatcagattg aacttgcagg gaacatctgt
    18721 gaccagttcg atcagttcgc gcgcatgttg cgccttatcg tttattccgt ccaacatgac
    18781 gtattcgaaa gtgatgaaat ccctgggtgc tttgaccaga tagcgttggc atgcggccat
    18841 caattctttc aagggatatt ttttgttcaa cggtacgatt tggttgcgga cttcgtcatt
    18901 ggaagcgtgg agggaaaccg ccaaagccac cggcatgaca tcgcgcaacc tgtccatttg
    18961 gggaaccata cccgaagtgg aaacggttac gcggcggcgg ctcaaaccgt agccgtggtc
    19021 gtccagcatg atgcttaagg cggtaacgac attgtcgaag ttcgccatcg gctcgcccat
    19081 gcccatcatg acgacgttgg aaatcacgcg ctcgtttttc ggtgtaacgc ccatcgcttt
    19141 gtttgcccac cacaattgcc cgatgatttc ggcagcagtc aaattgcggt tgaagccctg
    19201 ccggccggtc gaacaaaatg tacattccaa agcgcagccg acttgtgagg aaatgcagag
    19261 cgtgccgcga tccgattcgg ggatgaagac ggtttccacc ccgttgcccg taccgacatc
    19321 caaaagccat tttcgagtgc cgtctgaaga tttttgagac atcatcagct tgggaatttc
    19381 gatgcctgcc tgttcgttca gtttatggcg caacgatttt gccaaatcgg tcatttcgtc
    19441 aaaattttgc gcgccggatt ggtgcatcca acgcataacc tgtttggcac ggaaaggttt
    19501 ttcgcccata tcggcaaaat gtcgggtcag cccttggagg tcgtagttga gcagattggt
    19561 tttcatgtat ttgtgttttt cttaaattaa ggcttcaaat aaaaaattgc agggcaggca
    19621 agtttgattt gaagcctttt gcaacagagt tttcagacgg catggatata ttttatgccg
    19681 tctgaagagg agttgtgcgg tgtattgtat caacgggggc agatttcggt ttggctgaaa
    19741 aagtaggcaa tttccaaagc ggcattttcc ggagtgtccg agccgtgtac ggcattgatg
    19801 ctgaccgaag tggcaaagtc cgcgcgtatc gtgccttcgg cggcttcggc gggattggtc
    19861 gcccccatca gttcgcggtt tttcagaacg gcgttttcgc cttccagtac ttgaatcata
    19921 accggaccgc cggtcataaa ttcaaccaat ccggcgtaga aggggcggtc tttatgaacc
    19981 gcataaaatt cttgcgcctc tttgagggta agctgcttca ttttggcggc aacgattttc
    20041 agaccgttct cctcaaagcg gctgtatatt ttgccgataa cgtttttgcc gacggcatcg
    20101 ggtttgatga tggagatggt acgttcaatc gccatgctat atccttattt ttacttaaga
    20161 agaatcaaat cggtattcta tcaaaaaaat aacttatccg cctgaagcct tgggagatag
    20221 ggtcaggtgc ggctgttcca aataaacttc ggactgcatt tcgaccatcc ggctggcggt
    20281 gcgggtaaat tcttcggcaa aatcgccttc cgtatagata tggttgacat ctaccgcgcc
    20341 ggtggcacac agtttgaccc ggaaatcgta gagtacgtca atcagccaag tcagccgccg
    20401 cgcctccgcc ttttcttgcg gtgagagttg ttccaaacct gaaataaaaa ccatttcata
    20461 atgttcggcc aaatacagat agtcggactg tgagcggggg ccgaagcaca gtgcgcggaa
    20521 atcaaaccat atggcacggc cggactcggc tttgtgggga atctcccgac cgtggatggt
    20581 gctgatgccg gggttcaaat cggtaatgcc tgtcatttct ttgaacagtt ttgccagttt
    20641 tgcctcattt tcttcattgg caggcgtaaa gaaaatctcg gcggggcgga gggtacgcag
    20701 tcggtagtct tcaccgccgt caacgtttaa gacggtcagg ctggactcga tgagcgcgat
    20761 tgtgggaaga aaactgctcc ggttttgacc ttgcgggtag agttcggaag gcgcgtagtt
    20821 tgaagtcgcc accaaaacaa cgccctcgtt aagcaggttt tccagcagac ggcctaaaat
    20881 cattgcatcc gcaatatcgc tgacatgaaa ttcgtcaaaa cataatacgc gggtttcttt
    20941 ggcaatctcg gcggcaacgg atttcaacgg gttgctttcg cttttcaggg ttttcagcct
    21001 ctggtggatt tctgccataa aggcatgaaa gtggacgcgg cgtttgcggc ggtaagggag
    21061 gcagccgaaa aaagcgtcca tcagaaagct tttgccgcgt ccgaccccgc catagaaata
    21121 aagccctttg gggacttgcg gggaacgcaa actcctgcct aaaaaacggt ttcttttgcg
    21181 tttgaacatc atcaattcgg tccaaagccg atcgaggtgt tcgatggcgg ctgcctgcgc
    21241 gtcgtcgcgg atgaagttgg gcagttgtga ggcagcctga taccaagtca gcgggctgtg
    21301 attttcaaac ggcggggctt taaaaagttg gtctctatta ctcatattta accttgttat
    21361 acttcttgcg gctaagaaag aaaatgctta ccgtcggtat tataaatgat ttccttcaaa
    21421 cttggcattt tccgtggaaa agaataatga cgcgcacaag ggggtataag caaaggcggc
    21481 gtttcaatat ggtgcagata tgagctcaaa tgccttttat agt
//
LOCUS       DAWKJW010000015        21351 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.015, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000015 DAWKJW010000000
VERSION     DAWKJW010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21351
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.015"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(1..605)
                     /locus_tag="WJJ54_000454"
                     /pseudo
     CDS             complement(1..605)
                     /locus_tag="WJJ54_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255623.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
     gene            complement(911..1468)
                     /locus_tag="WJJ54_000455"
     CDS             complement(911..1468)
                     /locus_tag="WJJ54_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341360.1"
                     /translation="MMQKHKCLIDFILTVASQIAYADLPLSLEELLTDKGKFKLESSI
                     SYINTERNQSEFANPIYVQTSATKIATVMAMMITPVMAQNLDSQVFDSQNVKAIQLSQ
                     AEMKETQGEFVPIIAAAAFGGALGAWEYHGANLYNHGKLGTAQGAATAAGIGAATGVA
                     AKQGWLLLPEADWLGIWHGDRVFMH"
     gene            complement(1712..1870)
                     /locus_tag="WJJ54_000456"
     CDS             complement(1712..1870)
                     /locus_tag="WJJ54_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341361.1"
                     /translation="MKTPLPICTLSALAACALSGQGGSRVYGEIKARDLCVTAPILLS
                     AFCLACSR"
     gene            complement(1867..2709)
                     /locus_tag="WJJ54_000457"
     CDS             complement(1867..2709)
                     /locus_tag="WJJ54_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ7341362.1"
                     /translation="MLVCNPYEVVIHGTTSSGKIFRPSDWAERLCGILSSFTKDHRLS
                     YSKWVRPILVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQGG
                     QNGPADEHVMLAQAIEEKHAAEKAQEQTASGASYVLREIGADDTATAFAALSVLRSAL
                     TDINRFTEQINKVQRPQGYRLLGIFEEGKHNAVAVCGFREACTLASGRHIHIDDIVTL
                     PQSRRKGYASRLLEEVRKIGAETGVTKIHLNVHVNHDRADAHRLYFKNGFEICAYHFR
                     CDPK"
     gene            2944..3864
                     /gene="pyrB"
                     /locus_tag="WJJ54_000458"
     CDS             2944..3864
                     /gene="pyrB"
                     /locus_tag="WJJ54_000458"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HEZ7341363.1"
                     /translation="MPNPLYKQHVISISDLTREQLELLLQTALKLKSEPHGNLLEGKL
                     IGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAI
                     IQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAG
                     DLKYGRTVHSLCQALKRWGCEFAFVSPPSLAMPDYITEELDEAGCRYRILGSLEEAAE
                     WADILYMTRVQRERFDEQEFAKIQGKFNLDASMLARAKPNLRVLHPLPRVDEIHPDVD
                     ATPHAYYFEQATNGVYARMAILSLVLNEEV"
     gene            3874..4332
                     /locus_tag="WJJ54_000459"
     CDS             3874..4332
                     /locus_tag="WJJ54_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HEZ7341364.1"
                     /translation="METPKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVG
                     FNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDNFKVVQKRHLNLPDEI
                     AEVFRCPNTNCAGHGEPVKSRFYVKKHNGQTRLKCHYCEKTYSRDSVAEA"
     gene            4397..5062
                     /locus_tag="WJJ54_000460"
     CDS             4397..5062
                     /locus_tag="WJJ54_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341365.1"
                     /translation="MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLL
                     SALSAVALVWLAWAFVSARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLAL
                     LVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFAD
                     IFELSAALEGRAFKGMLKLTAEYKNIFGDACRSETALDLGALNQALQEISKTSEKSKR
                     IFY"
     gene            complement(5125..6342)
                     /locus_tag="WJJ54_000461"
     CDS             complement(5125..6342)
                     /locus_tag="WJJ54_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ7341366.1"
                     /translation="MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLW
                     GISGKYLYSPWQWGRLWDANRDQIHNPDLIYPDQVLVLRHVDGEPRLGLEQTDGIPVV
                     KMSPDKEVSGYGIPAIDVNFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRV
                     YTKGLKEPGRYLTYRINKNITDPDTGKFLGQEVAFSGIVRSLDYTDSVLEQRSKQAGE
                     RPKDNEYHTRTHPLITPLRTPSIQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEP
                     SRPVQAKIVSVFEGTRIAGQFQTITIDKGEADGLDKGTVLSLYKRKKTMQVDLSNNFK
                     SRDTVELISTPAEEVGLAMVYRTSEHLSSAIILENISDISVGDTAANPGRDLDNIPDQ
                     GRSRVKFGFDRSE"
     gene            6484..7029
                     /gene="def"
                     /locus_tag="WJJ54_000462"
     CDS             6484..7029
                     /gene="def"
                     /locus_tag="WJJ54_000462"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEZ7341367.1"
                     /translation="MKNRRRIRRRKEKIMALLNILQYPDERLHTVAKPVEQVDERIRK
                     LIADMFETMYESRGIGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYE
                     EGCLSVPGIYDTVTRAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVER
                     LSQLKQGRIKTKLKKRQKHTI"
     gene            7116..8042
                     /locus_tag="WJJ54_000463"
     CDS             7116..8042
                     /locus_tag="WJJ54_000463"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEZ7341368.1"
                     /translation="MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLT
                     APPVKQAALELGLRVEQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKH
                     GCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTD
                     TANEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSES
                     AAVIERKIRAFNPVPAAWVEYQGKLMKIRRAEVVAQQGTAGEVLSCSADGLVVACDEN
                     ALKITELQPAGGRRMNIAAFAAGRHIEAGTKL"
     gene            8121..9380
                     /gene="rsmB"
                     /locus_tag="WJJ54_000464"
     CDS             8121..9380
                     /gene="rsmB"
                     /locus_tag="WJJ54_000464"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HEZ7341369.1"
                     /translation="MSMALAQKLAADSIAAVAEGRNLQDVLAQIRTAHPDLTAQENGA
                     LQDIAYGCQRYLGSLKHMLAQMLKKPIDNPQLESLLLAALYQLHYTRNAPHAVVNEAV
                     ESIAKIGRGQYRSFANAVLRRFLRERDKLAASCKKDDVAKHNLPLWWVAYLKNHYPKH
                     WHNITAALQSHPPMTLRVNRRHGNAESYLEKLVAEGIAAKALDEYAVTLEEAVPVNRL
                     PGFSDGIVSVQDFGAQQAAYLLNPKDGERILDACAAPGGKTGHILELADCRVTALDID
                     AGRLKRVEDNIARLGFQTASAACADARDLAAWYDGKPFDAILADVPCTASGVARRNPD
                     VKWLRRPTDALKTARQQEALLDALWQTLKQGGRMLLATCSVFVEENDGQLQKFLNRHA
                     DAEPIESRVLLPNKHQDGFYYALIQKH"
     gene            9346..9945
                     /locus_tag="WJJ54_000465"
     CDS             9346..9945
                     /locus_tag="WJJ54_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HEZ7341370.1"
                     /translation="MAFITRLFKSIKQWLVLLPMLSVLPDAAAEGIDVSRAEARITDG
                     GQLSISSRFQTELPDQLQQALRRGVPLNFTLSWQLSAPIIASYRFKLGQLIGDDDNID
                     YKLSFHPLTNRYRVTVGAFSTDYDTLDAALRATGAVANWKVLNKGALSGAEAGETKAE
                     IRLTLSTSKLPKPFQINALTSQNWHLDSGWKPLNIIGNK"
     gene            9945..12065
                     /locus_tag="WJJ54_000466"
     CDS             9945..12065
                     /locus_tag="WJJ54_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEZ7341371.1"
                     /translation="MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVAFSAMLL
                     LVLSAVLARYVILLLKDRRDGVFGSQIAKRLSGMFTLVAVLPGVFLFGVSAQFINGTI
                     NSWFGNDTHEALERSLNLSKSALNLAADNALGNAIPVQIDLIGAASLPGDMGRVLEHY
                     AGSGFAQLALYNAASGKIEKSINPHKLDQPFPGKARWEKIQQAGSVRDLESIGGVLYA
                     QGWLSAGTHNGRDYALFFRQPVPKGVAEDAVLIEKARAKYAELSYSKKGLQTFFLATL
                     LIASLLSIFLALVMALYFARRFVEPVLSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTK
                     LFNHMTEQLSIAKEADERNRRREEAARHYLECVLEGLTTGVVVFDEQGCLKTFNKAAE
                     QILGMPLTPLWGSSRHGWHGVSAQQSLLAEVFAAIGAAAGTDKPVHVKYAAPDDAKIL
                     LGKATVLPEDNGNGVVMVIDDITVLIHAQKEAAWGEVAKRLAHEIRNPLTPIQLSAER
                     LAWKLGGKLDEQDAQILTRSTDTIVKQVAALKEMVEAFRNYARSPSLKLENQDLNALI
                     GDVLALYEAGPCRFAAELAGEPLMVAADTTAMRQVLHNIFKNAAEAAEEADVPEVRVK
                     SEAGQDGRIVLTVCDNGKGFGREMLHNAFEPYVTDKPAGTGLGLPVVKKIIEEHGGRI
                     SLSNQDAGGACVRIILPKTVETYA"
     gene            12058..13335
                     /locus_tag="WJJ54_000467"
     CDS             12058..13335
                     /locus_tag="WJJ54_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HEZ7341372.1"
                     /translation="MRSSDILIVDDEIGIRDLLSEILQDEGYSVALAENAEEARKLRH
                     QARPAMVLLDIWMPDCDGITLLKEWAKNGQLNMPVVMMSGHASIDTAVEATKIGALDF
                     LEKPISLQKLLSAVENALKHGAAQTETGPVFDKLGNSAAIQEMNREVGAAVKRASPVL
                     LTGEAGSPFETVARYFHKNGTPWVSPARVEYLIDMPMELLQKAEGGVLYVGDIAQYSR
                     NIQAGIAFIVGKAEHRRVRVVASGSRAAGSDGIACEEKLAELLSESVVRIPPLRMQHE
                     DIPFLIQGIACNVAESQKIAPAAFSEEALAALTRYDWPGNFDQLQSVVATLLLEADGQ
                     EIGAGAVSSLLGQNVPAEGAEDMVGGFNFNLPLRELREEVERRYFEYHIAQEGQNMSK
                     VAQKVGLERTHLYRKLKQLGIGVSRRAGEKTEE"
     gene            13426..14613
                     /gene="dprA"
                     /locus_tag="WJJ54_000468"
     CDS             13426..14613
                     /gene="dprA"
                     /locus_tag="WJJ54_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HEZ7341373.1"
                     /translation="MTEDERFAWLQLAFTPYIGAESFLLLMRRFGSAQNALSAPAEQV
                     APAVRHKQAAEAWRNAEKRALARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTA
                     PPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGKSLGGQNIPVVSGMASGIDT
                     AAHQGALEAEGGTIAVWGTGIDRIYPPSNKNLAYEIAEKGLIVSEFPIGTRPYAGNFP
                     RRNRLIAALSQVTLVVEAALESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIK
                     DGAKLVECLDDILNECPGLLQNTGASSYSINKDTPDTGRRAVQTAYAPPPAAKMPSEA
                     AAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQR
                     IRT"
     gene            14639..15100
                     /locus_tag="WJJ54_000469"
     CDS             14639..15100
                     /locus_tag="WJJ54_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HEZ7341374.1"
                     /translation="MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMM
                     MEVLLNSSEFSAEPADSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIH
                     ALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN"
     gene            15172..17478
                     /gene="topA"
                     /locus_tag="WJJ54_000470"
     CDS             15172..17478
                     /gene="topA"
                     /locus_tag="WJJ54_000470"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEZ7341375.1"
                     /translation="MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAV
                     DPDNGFAMKYQLISRNGKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKSKR
                     GLKNIKPQRVVFHEITKNAVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWK
                     KIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGA
                     KLEQFDLPNEAAQADVLKELEGKEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGF
                     TTDRTMRTAQQLYEGIDVGQGAIGLITYMRTDSVNLADEALTEIRHYIENKIGKEYLP
                     SAAKQYKTKSKNAQEAHEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTP
                     AKFDQTTVDITVGKGVFRVTGQVQTFAGFLSVYEESSDDEEGEDSKKLPEMSEGDKLP
                     VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYVTLEQKRFM
                     PTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIADGKRQWIPLMDKFWKPFIKQVE
                     EKEGIERAKFTTQELDETCPKCGEHKLQIKFGKMGRFVACAGYPECSYTRNVNETAEE
                     AAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGSKFIGCANYPKCKHVEPLEKPKD
                     TGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATWNPPVAEECPNCHWPVLTIKT
                     TKRWGVEKVCPQKECGWKEQIEPPAPKE"
     gene            complement(17551..18246)
                     /locus_tag="WJJ54_000471"
     CDS             complement(17551..18246)
                     /locus_tag="WJJ54_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341376.1"
                     /translation="MMKDLNLSNSLFKGYNDKHGLMICGYEWGWSKADEAAYVAGEYK
                     LPENKIDHTFANKSLYFGEQAKKWRYDNTIKNWFEMWGHPLDENGLGGAFEKSLVQTN
                     WAATQGNTIDNPDKFTQPEHIDNFLYHIEKLRPKVILFMGSRLADFLNNQNVLPRFEQ
                     LVGKQTKPLETVQKEFDGTRFNVKFQSFEDCEVVCFPHPSASRGLSYDYIALFVPEMN
                     RILSDFKTTRGFK"
     gene            18936..19313
                     /locus_tag="WJJ54_000472"
     CDS             18936..19313
                     /locus_tag="WJJ54_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7341377.1"
                     /translation="METHEKIRLMRELNKWSQEDMAEKLAMSAGGYAKIERGETQLNI
                     PRLEQLAQIFKIDMWDLLKSGGGGMVFQINEGDSGGDIALYASGDVSMKIEFLKMELK
                     HCKEMLEQKDKEIELLRKLTETV"
     gene            19402..19971
                     /gene="rsmD"
                     /locus_tag="WJJ54_000473"
     CDS             19402..19971
                     /gene="rsmD"
                     /locus_tag="WJJ54_000473"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEZ7341378.1"
                     /translation="MAAGKHTKHSNRVRIIGGQCRGRKLSFTSADGLRPTPDSVREKL
                     FNWLGQDLTGKTVLDLFGGSGALGIEAASRNAKRVLISDNNRQTVQTLQKNSRELGLG
                     QVQIVCSDGIAYLKTVSEQFDVVFLDPPFAWQDWQILFDALKPCLNPRAFVYLEAGTL
                     PDIPDWLTEYREGKSGQSTFELRVFQVAE"
     gene            20094..20345
                     /locus_tag="WJJ54_000474"
     CDS             20094..20345
                     /locus_tag="WJJ54_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HEZ7341379.1"
                     /translation="MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGH
                     YDEPQCQQVCPVDCILIDEEYPETHDELMAKYEKIIQFK"
     gene            20442..20525
                     /locus_tag="WJJ54_000475"
     tRNA            20442..20525
                     /locus_tag="WJJ54_000475"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20476..20478,aa:Tyr,seq:gta)
     gene            20556..20629
                     /locus_tag="WJJ54_000476"
     tRNA            20556..20629
                     /locus_tag="WJJ54_000476"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20588..20590,aa:Gly,seq:tcc)
     gene            20639..20713
                     /locus_tag="WJJ54_000477"
     tRNA            20639..20713
                     /locus_tag="WJJ54_000477"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20671..20673,aa:Thr,seq:ggt)
     gene            20762..>21351
                     /locus_tag="WJJ54_000478"
     CDS             20762..>21351
                     /locus_tag="WJJ54_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEZ7341380.1"
                     /translation="MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAA
                     KAYDQIDNAPEEKARGITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVCSAADGPMPQTREHILLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSS
                     YDFPGDDCPIVQGSALKALEGDAAYEEKIFELAAAL"
BASE COUNT         5353 a         5461 c         5810 g         4727 t
ORIGIN      
        1 aaaatcagta ttttttggca cgatggctaa aatttttcct tccatttcgc catcacgtgt
       61 tttccatgcg ctcaagaatt gtgatttgct cattgagacg tgccccagcg atggatcagc
      121 cagcaaaaca gtttctccgt taataccgtt caataccgaa aaatggttgt ttttacggta
      181 ttttaaatac acaattacag gaatttttag ttgtaccaac tgttcaaatg gcaaagcata
      241 accttgtgct tcaaaaccca gttcgggcat tatgcgttgc atatcatcaa aagaagcacg
      301 catttgggtt ttatccattt tgtctaagat ttctgcttca gaataatgtc tgccataaaa
      361 attattcagt aacgtggcaa tcgaagccgc gccgcaagaa aaatccaaat cttgttttac
      421 tatgccggaa tctcgccgtg ctttccaact tcgtacatgg atgttttggt aagaagcggg
      481 gggtcaacaa acataggcca agcaaaaact atatttgggg cgaaaccaat caaagccgca
      541 taatttatca atttataaag attttttatc ataatatgta tacgcggaat aaacgcatga
      601 aacataaaaa aataaaatca tatgcaattt tattgcatga ataaatatga ataaaataga
      661 taatgatggg agtaaatacg ccatgtattt tggaagttta aatttattaa taataaaata
      721 atttatcgta gcgcaaataa atcccaaaat tggaacgatt agaaaaaaaa ttaatacacc
      781 catcatcatg caaactctat attaataaat agctaactaa ttctattgtg gaaattagtt
      841 agctaactaa aagttattaa tgattatttc cgagaattga ctgcattgtt ggcagcattg
      901 gccccaaaac ctagtgcatg aatacccggt ctccatgcca aattcccagc caatccgcct
      961 ccggcagcag cagccagccc tgttttgccg ctactcctgt tgccgcaccg attcctgccg
     1021 cagtagccgc gccttgcgca gttcctaatt taccatgatt atacaaatta gcaccatgat
     1081 actcccatgc acctaatgca ccgccaaaag cagcggctgc aataatggga acaaattcac
     1141 cttgtgtttc tttcatttca gcctgtgata attgaattgc tttcacattt tggctgtcaa
     1201 aaacttggct gtctaaattt tgcgccatta caggtgtaat catcatagcc attacagttg
     1261 caattttcgt tgcgctggtt tgcacataaa taggattagc aaattcgctt tgattgcgtt
     1321 cagtgttgat gtagctaata ctgctttcta gtttgaattt acccttgtca gtcaataatt
     1381 cttccaaact taaaggtaag tcagcataag caatttggct ggcaacagtc aaaataaaat
     1441 ctattagaca tttgtgtttt tgcatcattt cgtttgattt tctagttttt gagaatgata
     1501 caaagttttt tacaaagtaa agagtcactc tgaaaaacat tttttcatta taaatcaaaa
     1561 tattgataga ataaatagcg agcatcgatt cacggtgtac tttagtgcaa agcgtacaac
     1621 gcgagcctga accaccagcc gcaacaggaa aagaaagccg atagagtgca atgcttgcca
     1681 acgtgcaagc gagcttgcaa gaacgcttgg ctcaacgaga gcaggcaaga cagaaagcag
     1741 aaagcaggat aggagcggta acgcaaaggt ctcgggcttt gatttcgccg taaaccctgc
     1801 tgccgccttg tccggaaagg gcgcaggcgg cgagtgccga cagggtgcag atggggaggg
     1861 gggttttcat ttggggtcgc aacggaagtg gtatgcgcag atttcaaaac cgtttttgaa
     1921 atacaggcgg tgcgcgtcgg cacggtcgtg gttgacgtgg acgttgaggt ggattttggt
     1981 tacccctgtt tccgcgccga ttttgcggac ttcttccaaa aggcgcgagg cgtagccttt
     2041 gcggcggctt tgcggcaggg taacgatgtc atcgatgtgg atgtggcggc cgctggcgag
     2101 ggtgcaggct tcgcggaagc cgcagacggc gacggcattg tgtttgcctt cttcaaaaat
     2161 acccagcagg cggtagcctt gggggcgttg gactttgttg atctgttcgg taaagcggtt
     2221 gatgtcggtc agggcggaac gcaaaacgct caaggctgca aaggcggtgg cggtgtcgtc
     2281 cgcgccgatt tcgcgcaaaa cgtaggatgc gcccgaggcg gtctgttcct gtgctttctc
     2341 ggcggcgtgt ttttcttcga ttgcctgtgc cagcatgacg tgttcgtcgg cggggccgtt
     2401 ttgtccgccc tgttcgcgtt cttcgagcag ggctttgcag tcgatgacgc gcaggtcgtt
     2461 gtcggcggca aagtccatca ggaagcggaa catttggggg ttgtcggttt ccagtttttt
     2521 atcgacggcg acgcagcgga tgttgtccac cagtatgggg cgcacccatt tcgaatagga
     2581 aagcctgtgg tctttggtga acgaggacag aatgccgcac aggcgttccg cccagtcgct
     2641 gggacggaaa atcttgccgg aactcgttgt gccgtggatg acgacttcgt aggggttgca
     2701 gactaacatg gcggcttcct gaaaagaaat gtctggcgcg attatacctt atgcttatgc
     2761 gggcgtgttt ggatatgccg tctgaaaagt acgggattcg tgcggtaaaa ctttgcggcg
     2821 gcaaatgtgc gataatacgc gccgtattgc cgcttttgcg aagctgttcc gcaaacatac
     2881 gggcggcgtg gacgtataac cggatgcctg cttggcgcgg gtcttttacg gaggaggggt
     2941 gaaatgccta atccgctata taaacagcat gttatttcta tttctgattt gacgcgggaa
     3001 cagctcgagc tgctgcttca gacggcattg aaactgaagt cggagccgca cggcaacctg
     3061 ttggaaggga aacttatcgg ttcgtgcttc tttgaaccgt ccacgcgtac gcgcctgtcg
     3121 tttgaaacgg cggtacagcg gctgggcggc aaggtcatcg gcttttcgga cggcgcgaat
     3181 accagtgcca aaaaaggcga gacgcttgcc gataccgccc gcatcatttc cggctacacc
     3241 gacgcaatca tccaacgcca tcccaaagac ggcgcggcgc gcgtggcggc ggagttttcg
     3301 cgcgtccccg ttatcaacgc cggcgacggc acgaaccagc accccagtca gacgctgctc
     3361 gacctggtta ccatttatga aacgcaggga cgtttggaca agctcaaaat cgccatggcg
     3421 ggcgacttga aatacggacg taccgtgcat tcgctttgtc aggcgttgaa acgctggggc
     3481 tgcgaatttg cctttgtttc gccgcccagc ctcgcgatgc ccgactacat taccgaagag
     3541 ttggacgaag ccggctgccg ataccgtatc ctcggtagtt tggaagaagc ggcggaatgg
     3601 gcggacatcc tgtatatgac ccgtgttcaa cgcgaacgtt tcgacgaaca ggaatttgcc
     3661 aaaatccaag gcaaattcaa tctcgacgca tccatgcttg cccgcgccaa accgaacctg
     3721 cgcgtgctgc accctttgcc gcgcgtggac gaaatccatc ccgatgtcga tgctacgccg
     3781 catgcctatt atttcgagca ggcgaccaac ggcgtttatg cgcgtatggc gatattgtcg
     3841 ctggtgttga acgaagaagt gtgaggaacc gatatggaaa ccccgaaact cagtgtcgaa
     3901 gccattgaaa aaggtacggt tatcgaccat attcccgccg gcagggggct gaccatcctg
     3961 cgccagttca aacttttgca ctacggcaac gcggtaaccg tgggcttcaa cctgcccagc
     4021 aaaacccaag gcagcaaaga catcatcaaa atcaaaggcg tgtgcttgga cgacaaagcc
     4081 gccgaccgcc tcgccctgtt cgcccccgaa gcggtggtca ataccatcga caatttcaag
     4141 gtcgtgcaga agcggcattt gaacctgccc gatgaaattg ccgaagtgtt ccgttgcccg
     4201 aacacgaatt gcgccggcca cggcgagccg gtcaaaagcc ggttttatgt taaaaaacac
     4261 aacgggcaga cgcggctgaa atgccattac tgcgaaaaaa cctacagccg ggattcggtg
     4321 gcggaagcct gacggattcc cttaaaccga gcgggcggca tttcgtctgc cgcttgtttt
     4381 gccaatctga aatggaatga tgatgcacgc ttctgtccaa agccgtttcg caccgatact
     4441 ttatgttttg attttctttg ccggtttttt gaccgcgcaa atttggttca atcagaaagc
     4501 ctatactgaa gagctgcctc cgcttctgtc cgcattgtcc gccgtcgcgc tggtgtggct
     4561 ggcgtgggcg ttcgtgtcgg cgcgttcaaa ggctaaggcg gaaaagttct accgcgaaaa
     4621 aatgatacag aacgaaagca tacaccccgt cctgcacgct tctttgcaac acttggaaca
     4681 caagccgcaa atgctcgccc tgctggtcaa aaaccacggc aaagggatgg cggaacaggt
     4741 caggttcaag gcggaagtgc tgcccgacga cgaagacgcg cgcacgattg ccgccgagtt
     4801 ggcaaaaatg gatatgtttg cattggggac ggacgcggtc gcctcgggcg aaacctatgg
     4861 acgcgtgttc gccgatattt tcgagttgtc ggcggctttg gaagggcgcg cgttcaaagg
     4921 aatgttgaaa ctgacggcgg aatataaaaa catcttcggc gatgcctgcc gttcggaaac
     4981 ggcgttggat ttgggcgcgc tcaatcaggc gttgcaggag atttcaaaaa catcggaaaa
     5041 gtccaaacgg atattttatt gaagatggaa aaatgccgtc tgaaacggaa ggtgtttcag
     5101 acggcatttt tgtcggatga ttaattattc ggagcggtcg aagccaaact tcacgcggct
     5161 gcggccctga tccggtatat tgtccaaatc gcgtcccgga ttggcggcgg tgtcgcctac
     5221 ggaaatatcg gagatgtttt ccaaaatgat ggcggacgac aggtgttcgg aggtgcggta
     5281 aaccattgcc aagcccactt cttcggcagg agtggaaatc agctcgacgg tatccctgct
     5341 tttgaaattg ttggagaggt cgacctgcat cgttttcttg cgtttgtaga ggctcaaaac
     5401 cgtgcctttg tccaaaccgt ccgcctcgcc tttgtcgatg gtgatggttt gaaactggcc
     5461 ggcaatcctt gtaccttcaa acacggaaac gattttagcc tgaaccgggc gggacggttc
     5521 gtgcggcatc atgttgaagc ggtcggtgtc ttccggcatt ttcatcaggt agtcgccctg
     5581 ctgtatttcg gaaatggcgg tttcgaccac cagcggctgt atcgaagggg tgcgcagcgg
     5641 ggtaatcaaa ggatgggtgc gggtatggta ttcgttgtct ttcggccgtt ctccagcctg
     5701 tttcgagcgt tgttcgagga cagagtcggt atagtcgagg gagcgcacga tgccgctgaa
     5761 tgcgacttcc tgcccgagga atttacccgt atccggatcg gtgatgtttt tattgattcg
     5821 gtaggtcagg tagcggcccg gctctttcag gcctttggtg taaaccctgg tgcctttggt
     5881 gtacagcagc ctgccttccg ggcccgagag caggcgcggc gcggcagcgg tttctttgcg
     5941 ggaaacgatt tgcgggtgcc gcataaagat gcggtagaag ttgacatcga tggcgggaat
     6001 accgtatccg gacacttcct tatccggact cattttgacg acggggatgc cgtctgtctg
     6061 ttccaagccg aggcgcggtt cgccgtcaac gtggcgcaac accaatacct ggtccggata
     6121 aatcaggtcg ggattgtgga tttgatcccg gttcgcgtcc cacaggcggc cccattgcca
     6181 cgggctgtac aggtatttgc ccgaaatgcc ccacagggtg tcgccctgtt tgaccgtgta
     6241 gcgttccggc gcgttcgggc gcacctccaa atttgccgcc aaagtttgtg ttgagaatgc
     6301 catacctgcc gcgcagagca gggttataat acgacgttgc ataaccgttc cccttatctg
     6361 ataaatttcg gtttgtcttg cttgattggg ttggaaaaag cggcggcagc ccctcgggat
     6421 gtgccgcgtg ataaaaaatg ttccgcattt taacatcgaa ttatccgcac catcacggta
     6481 attatgaaaa acaggcggcg tatccgccga aggaaagaga aaattatggc tttattgaat
     6541 atcttgcaat atcccgacga gcgtctgcac acggtggcaa agcctgtcga acaagtcgac
     6601 gagcgcatcc ggaagctgat tgccgatatg tttgaaacga tgtacgaatc gcgcggcatc
     6661 gggctggcgg cgacgcaggt cgatgtgcac gagcgcgtgg tcgtgatgga tttgaccgaa
     6721 gaccgcagcg aaccgcgcgt gttcatcaac cccgtcatcg ttgaaaaaga cggcgaaacc
     6781 acttacgaag agggctgcct gtccgtgccg ggcatttacg acaccgtaac ccgcgccgaa
     6841 cgcgtcaagg tcgaggcttt gaacgaaaaa ggcgaaaagt tcacgctgga ggcggacggc
     6901 ttgctggcga tttgcgtgca gcacgagttg gatcacctga tgggcatcgt gtttgtcgaa
     6961 cgcctgtcgc agctcaagca ggggcggatt aagaccaagc tgaaaaaacg tcagaaacat
     7021 acgatttgac ccttttgccg tgccgtctga acgctgcaaa gttttcagac ggcacggtct
     7081 tgtccgacaa ttttacgcac acgcaggaac acgctatgaa agtcatcttc gccggcacgc
     7141 ccgattttgc cgccgccgcc ttaagagccg ttgccgccgc cggttttgaa atcccgctgg
     7201 tgctgaccca gcccgaccgt ccgaaagggc gcggtatgca actgactgcc ccgcccgtca
     7261 aacaagccgc gctggaactc ggtttgcgcg tcgaacagcc cgaaaaactg cgtaacaacg
     7321 ccgaagccct gcaaatgctc aaagaggtcg aggcagacgt aatggtggtt gccgcctacg
     7381 gtttgattct gccgcaagac gtgttggatg tgccgaaaca cggctgcctc aatatccacg
     7441 cttcgctgct gccccgttgg cgcggcgcgg cgccgattca gcgtgcgatt gaggcaggcg
     7501 atgccgaaac cggcgtgtgc attatgcaga tggacatcgg tttggacacc ggcgatgtgg
     7561 tcagcgaaca ccgttacgcc atccaaccta ccgataccgc caacgaagtc cacgacgcgc
     7621 tgatggaaat cggtgcggcg gcggttgttg ccgatttgca acagcttcaa agcaaaggcc
     7681 gtctgaacgc ggtcaaacag cccgaagaag gtgttactta cgcccaaaaa ctaagcaaag
     7741 aagaggcgcg tatcgattgg agcgaaagcg cggcggttat cgaacgcaaa atccgcgcct
     7801 tcaaccccgt gcctgccgcg tgggtcgaat atcagggcaa gctgatgaaa atccggcggg
     7861 cggaagtggt ggcgcaacaa ggcacggcag gcgaagtgtt gtcctgttcg gcggacggtt
     7921 tggtcgttgc ctgcgacgaa aacgcgctga agattaccga attgcagcct gccggcggca
     7981 ggcgtatgaa tatcgcggcg tttgcggcgg gacggcatat cgaagcaggg acgaagctgt
     8041 aaatcccttc agacggcatt ccgatccgca aacgggaatg ccgcctgaaa ccatcagtcg
     8101 aagaaagcga atcacataat atgagtatgg cacttgccca aaaacttgcc gccgacagca
     8161 ttgcggcggt tgccgaagga cgcaaccttc aggacgtgtt ggcgcaaatc cgcaccgcgc
     8221 atcccgacct tacggcgcag gaaaacggcg cgttgcagga catcgcctac ggctgccagc
     8281 gttatttggg cagtttgaaa catatgctcg cgcagatgct gaaaaagccg attgacaacc
     8341 cgcagctcga aagcctgctt ttggcggcgt tgtaccaact gcattacacg cgcaacgcgc
     8401 cgcacgccgt ggtcaatgag gcggtggaaa gcatcgccaa aatcggacgc gggcagtacc
     8461 gttcgtttgc caacgcggtt ttgcgccgct ttttgcgcga acgcgacaag cttgcagctt
     8521 cctgtaaaaa agacgatgtg gcgaaacaca acctgccgct gtggtgggtg gcttacctga
     8581 aaaaccatta tccgaaacac tggcacaaca tcactgccgc gctgcaatcc catccgccga
     8641 tgacgttgcg cgtcaaccgc cgacacggca atgccgaaag ctatttggaa aaactggtgg
     8701 cggaaggtat cgcggctaag gcgttggacg aatatgcggt tacgttggaa gaagccgtgc
     8761 cggtaaaccg cctgcccggt ttttcagacg gcatcgtttc ggtacaggac ttcggcgcgc
     8821 agcaggcggc gtatctcctt aacccgaaag acggagaacg gattttggac gcgtgcgccg
     8881 cgccgggcgg caagacgggg catatcttgg aactggcgga ttgccgcgtt accgccttgg
     8941 acatcgatgc aggccgtctg aagcgtgtgg aggacaatat cgcgcgcctg ggctttcaga
     9001 cggcatcggc ggcgtgtgcc gatgcgcggg atttggcggc gtggtatgat ggaaagcctt
     9061 tcgacgcaat ccttgccgac gtgccatgca ccgcttccgg cgtggcgcgg cgcaatcccg
     9121 acgtgaaatg gctgcgccgt ccgaccgacg cgctcaaaac cgcccgccag caggaagccc
     9181 tgctggacgc actttggcag acgctgaaac agggcggcag aatgctgctt gccacctgtt
     9241 ccgtgttcgt cgaagaaaac gacgggcaat tgcaaaaatt cctcaaccgc catgccgatg
     9301 ccgaaccgat cgaatcgcgg gtgcttttac cgaacaaaca ccaagatggc ttttattacg
     9361 cgcttattca aaagcattaa acaatggctt gtgctgctgc cgatgctttc cgttttgccg
     9421 gacgcggcgg cggaggggat agatgtgagc cgcgccgaag cgaggataac cgacggcggg
     9481 cagctttcca tcagcagccg cttccaaacc gagctgcccg accagctcca acaggcgttg
     9541 cgccggggcg tgccgctcaa ctttacctta agctggcagc tttccgcccc gataatcgct
     9601 tcttatcggt ttaaattggg gcaactgatt ggcgatgacg acaatattga ctacaaactg
     9661 agtttccatc cgctgaccaa ccgctaccgc gttaccgtcg gcgcgttttc gacagactac
     9721 gacaccttgg atgcggcatt gcgcgcgacc ggcgcggttg ccaactggaa agtcctgaac
     9781 aaaggcgcgc tgtccggtgc ggaagcaggg gaaaccaagg cggaaatccg cctgacgctg
     9841 tccacttcaa aactgcccaa gccttttcaa atcaatgcat tgacttctca aaactggcat
     9901 ttggattcgg gttggaaacc tctaaacatc atcgggaaca aataatgcgc cgttttctac
     9961 cgatcgcagc catatgcgcc gtcgtcctgt tgtacggact gacggcggca accggcagca
    10021 ccagttcgct ggcggattat ttctggtgga ttgttgcgtt cagcgcaatg ctgctgctgg
    10081 tgttgtccgc cgttttggca cgttatgtca tattgctgtt gaaagacagg cgcgacggcg
    10141 tattcggttc gcagattgcc aaacgccttt ctgggatgtt tacgctggtt gccgtactgc
    10201 ccggcgtgtt tctgttcggc gtttccgcac agtttatcaa cggcacgatt aattcgtggt
    10261 tcggcaacga tacccacgag gcgcttgaac gcagcctcaa tttgagcaag tccgcattga
    10321 atctggcggc agacaacgcc cttggcaacg ccatccccgt gcagatagac ctcatcggcg
    10381 cggcttccct gcccggggat atgggcaggg tgctggaaca ttacgccggc agcggttttg
    10441 cccagcttgc cctgtacaat gccgcaagcg gcaaaatcga aaaaagcatc aacccgcaca
    10501 agctcgatca gccgtttcca ggtaaggcgc gttgggaaaa aatccaacag gcgggttcgg
    10561 tcagggattt ggaaagcata ggcggcgtat tgtacgcgca gggctggctg tcggcgggta
    10621 cgcacaacgg gcgcgattac gccttgtttt tccgtcagcc ggttcccaaa ggtgtggcag
    10681 aggatgccgt cttaatcgaa aaggcaaggg cgaaatatgc cgagttgagt tacagcaaaa
    10741 aaggtttgca gacctttttc ctggcaaccc tgctgattgc ctcgctgctg tcgatttttc
    10801 ttgcactggt catggcactg tatttcgccc gccgtttcgt cgaacccgtc ctatcgcttg
    10861 ccgagggggc gaaggcggtg gcgcaaggcg atttcagcca aacccgtcct gttttacgca
    10921 atgacgagtt cgggcgtttg accaagttgt tcaaccacat gaccgagcag ctttccatcg
    10981 ccaaagaagc agacgagcgc aaccgccggc gcgaggaagc cgccagacat tatcttgaat
    11041 gcgtgttgga ggggctgacc acgggcgtgg tggtgtttga cgaacaaggc tgtctgaaaa
    11101 ccttcaacaa agcggcggaa cagattttgg ggatgccgct tacccccctg tggggcagca
    11161 gccggcacgg ttggcacggc gtttcggcgc agcagtccct gcttgccgaa gtgtttgccg
    11221 ccatcggcgc agcggcaggt acggacaaac cggtccatgt gaaatatgcc gcgccggacg
    11281 atgccaaaat cctgctgggc aaggcaaccg tcctgcccga agacaacggc aacggcgtgg
    11341 taatggtgat tgacgacatc accgttttga tacacgcgca aaaagaagcc gcgtggggcg
    11401 aagtggcaaa acggctggca cacgaaatcc gcaatccgct cacgcccatc cagctttccg
    11461 ccgaacggct ggcgtggaaa ttgggcggga agctggatga gcaggatgcg caaatcctga
    11521 cgcgttcgac cgacaccatc gtcaaacagg tggcggcatt gaaggaaatg gtcgaagcat
    11581 tccgcaatta tgcgcgttcc ccttcgctca aattggaaaa tcaggatttg aacgccttaa
    11641 tcggcgatgt gttggcattg tatgaagccg gtccgtgccg gtttgcggcg gagcttgccg
    11701 gcgaaccgct gatggtggcg gcggatacga ccgccatgcg gcaggtgctg cacaatattt
    11761 tcaaaaatgc cgccgaagcg gcggaagaag ccgatgtacc cgaagtcagg gtaaaatcgg
    11821 aagcggggca ggacggacgg attgtcctga cggtttgcga caacggcaaa gggttcggca
    11881 gggaaatgct gcacaacgcc ttcgagccgt atgtaacgga caaaccggcg ggaacgggat
    11941 tgggactgcc cgtggtgaaa aaaatcattg aagaacacgg cggccgcatc agcctgagca
    12001 atcaggatgc gggtggcgcg tgtgtcagaa tcatcttgcc aaaaacggta gaaacttatg
    12061 cgtagcagcg atattttaat tgtagacgac gaaatcggca tccgcgacct gctgtcggaa
    12121 atcctgcagg acgaaggtta ttcggtcgca ttggcggaaa acgccgaaga ggcgcgcaag
    12181 ctgcgccatc aggcgcgtcc ggcgatggtg ctgctggata tttggatgcc cgattgcgac
    12241 ggcatcaccc ttttgaagga gtgggcgaaa aacgggcagc tcaatatgcc ggtggtgatg
    12301 atgagcgggc atgccagcat cgataccgcc gtagaagcga ccaaaatcgg cgcgctcgac
    12361 tttttggaaa aaccgatttc cctgcaaaag ctgctgtctg ccgtcgaaaa cgcgttgaaa
    12421 cacggtgcgg cgcaaaccga aacggggcct gtattcgaca agctgggcaa cagtgcggcg
    12481 attcaggaaa tgaaccgtga ggtaggggct gcggtgaaac gtgcctctcc cgtacttttg
    12541 acgggcgagg caggttcgcc gtttgaaacg gtggcacgct atttccataa aaacggtacg
    12601 ccgtgggtca gcccggcaag ggtcgaatat ctgatcgata tgccgatgga actgttgcag
    12661 aaggcggagg gcggcgtttt gtatgtcggc gacatcgccc agtacagccg caacatccaa
    12721 gccggtattg cctttattgt cggcaaggcg gaacaccgcc gcgtcagggt ggtcgcatcg
    12781 ggcagcaggg cggcaggttc agacggcatt gcctgcgagg aaaagctggc ggaactgctg
    12841 tcggagtcgg tcgtccgcat tccgccgctg cgtatgcagc atgaagatat tcccttcctg
    12901 atacagggga ttgcctgcaa tgtggcggaa agtcaaaaga ttgcgcccgc cgcattcagt
    12961 gaagaggcac ttgccgcatt gacccgttac gactggccgg gaaatttcga ccaactgcaa
    13021 agcgtcgttg caacgctgtt gttggaggcg gacggacagg aaatcggcgc aggggcggtt
    13081 tcttcccttt tggggcagaa tgtgcctgcc gagggagcgg aagatatggt gggcgggttt
    13141 aatttcaacc tgcccctgcg cgaattgagg gaggaggtgg agcggcgtta tttcgagtac
    13201 cacatcgccc aagaaggtca gaatatgagc aaagtggcgc agaaagtcgg tttggaacgc
    13261 acgcaccttt accgcaaact caaacagctc ggcatcggcg tttcgcgccg ggcgggggaa
    13321 aaaaccgaag aataggcccg gacggccggt tttccggctg cgggcttttg ttttcagacg
    13381 gcatttggtg caaatgccgt ctgaaatcgt aaggggacgg attttatgac agaggacgaa
    13441 cgtttcgcgt ggttgcaact ggcttttacg ccctatatcg gtgcggaaag tttcttgctg
    13501 ctgatgcgcc gtttcggcag cgcgcaaaat gccttgtccg caccggcgga acaggtcgcc
    13561 ccggcggtgc ggcacaagca ggcggccgag gcttggcgca atgcggaaaa acgcgctttg
    13621 gcgcggcagg cggcagaagc ggcgttggaa tgggaaatgc gggacggatg ccgcctgatg
    13681 ctgcttcagg atgaagattt ccccgaaatg ctgacgcagg ggctgaccgc gccgccggtt
    13741 ttgtttttgc gcggcaacgt gcggctgctg cacaagcctt ccgccgccat cgtcggcagc
    13801 cgccatgcca cgccgcaggc gatgcggatt gccaaagatt tcggcaagtc gttgggcggg
    13861 caaaatatcc ccgttgtgtc gggtatggct tccggtatcg atactgccgc ccatcagggc
    13921 gcactggagg cagaaggcgg caccatcgcc gtgtggggga cgggtataga ccgcatttac
    13981 ccgccgtcca ataaaaacct tgcctatgaa atcgccgaaa aaggattgat tgtcagcgag
    14041 tttcccatcg gtacgcgccc gtatgccggc aactttccgc gccgcaaccg cctgattgcc
    14101 gcgctgtcgc aggttacgct ggtggttgaa gctgcgttgg aatccggttc gctgattacc
    14161 gccggcttgg cggcagaaat ggggcgcgaa gtgatggcag tacccggttc gatagacaat
    14221 ccgcacagca aaggctgcca caaactgatt aaagacggcg cgaaattggt ggaatgcctg
    14281 gacgacatcc tgaacgaatg cccggggcta ttgcaaaata cgggtgcttc atcatattct
    14341 ataaataagg atacgcccga cacgggacgc cgcgccgttc agacggcata cgccccgccg
    14401 cctgccgcaa aaatgccgtc tgaagcggcg gcaggcggca cagccgtcgg cggcatactg
    14461 gataaaatgg gtttcgaccc catccatccc gacgtgcttg ccggacagtt ggctatgcct
    14521 gccgcagatt tgtatgccgc actgttggaa ttggaattgg acggcagcgt tgccgcaatg
    14581 cccggcggca gataccagcg tatccgaact tgaacgcact ttatattaag gaacacgaat
    14641 gaccgaagtc atcgcctacc tcatcgaaca tttccaagat ttcgatacct gtccgccgcc
    14701 cgaagacttg ggtatgctgc ttgaagaagc gggtttcgat acgatggaaa tcggcaacac
    14761 cctgatgatg atggaagtat tgctcaacag ctccgaattt tccgccgaac ctgccgacag
    14821 cggcgcattg cgcgtgtaca gcaaagaaga aaccgacaac ctgccgcagg aagtgatggg
    14881 gctgatgcag tatctgattg aagaaaaagc cgtcagctgc gaacagcggg aaatcatcat
    14941 ccacgcgctg atgcacattc ccggcgacga aattaccgta gataccgcca aagtgctgac
    15001 cctgctgctt ttatgggcaa acaagagcga gctgcccgtg ttggtcggcg acgagctgat
    15061 gagcgcgctt ttactcgaca acaaacccac gatgaactga agcggcttca gacggcccgc
    15121 ccgaggccgt ctgaaacgcc ggcatcaaaa ccaccatcca gagaacgaca aatggcgaaa
    15181 aacctattaa tcgtcgaatc cccgtccaaa gccaaaaccc tgaaaaaata tttgggcggc
    15241 gattttgaaa tccttgcatc ctacggacac gtccgcgacc tcgtccccaa aagcggcgcg
    15301 gtcgatcccg acaacggctt tgcgatgaaa taccaactca tcagccgcaa cggcaaacac
    15361 gtcgatgcca ttgtcgccgg tgccaaagaa gctgaaaaca tctacctcgc caccgacccg
    15421 gatagggaag gcgaagccat ttcctggcat cttttggaaa tcctcaaatc caaacgcggc
    15481 ttgaaaaaca tcaagccgca gcgtgtcgtg ttccacgaaa tcaccaaaaa cgccgtgctc
    15541 gatgccgttg cccatccgcg cgaaatcgaa atggacttgg tcgatgcgca acaagcccgc
    15601 cgtgctttgg actatttggt cggctttaac ctttcgccat tgttatggaa aaaaatccgc
    15661 cgcggtttga gcgcgggtcg tgtgcaaagt cccgctttgc gcctgatttg cgaacgcgaa
    15721 aacgaaatcc gcgcgtttga agcgcaggaa tattggacgg tacatctaga cagccacaaa
    15781 ggccgcagca agttcaccgc caaactcgcc caatacaacg gcgcgaaact cgaacaattc
    15841 gacctgccga acgaagccgc tcaagccgat gtgttgaaag aactcgaagg caaagaggcc
    15901 gtcgttaccg ccatcgaaaa gaaaaagcgc agccgcaatc ctgccgcgcc gttcaccact
    15961 tctaccatgc agcaggatgc cgtgcgcaaa ctcggcttca ccaccgaccg caccatgcgt
    16021 accgcccaac agctttatga aggtatagac gtagggcagg gcgcgatcgg tctgattacc
    16081 tatatgcgta ctgacagcgt gaatttggcg gatgaagcgt taaccgaaat ccgccattac
    16141 atcgaaaaca aaatcggcaa agaatatctg ccgagtgccg ccaaacaata caaaaccaaa
    16201 tccaaaaacg cccaagaagc gcacgaagcc atccgtccga cttccgtgta ccgcacgccc
    16261 gaaagcgtca aacccttcct gagcgcagac cagttcaaac tctatcaaat gatttggcag
    16321 cgtaccgtcg cctgtcagat gacgcctgcc aaattcgacc aaaccaccgt cgatattacc
    16381 gtcggcaaag gcgtattccg cgtaaccgga caagtgcaaa ccttcgcagg cttcttgagc
    16441 gtttatgaag aaagcagcga cgatgaagaa ggcgaagaca gcaaaaaact gcccgaaatg
    16501 agcgaaggcg ataaattgcc cgtggacaaa ctctacggcg aacaacactt taccactccg
    16561 ccgccgcgct acaacgaagc cacgctggtt aaagccctcg aagaatacgg catcggccgc
    16621 ccctcgacct acgccagcat catctccacg ctcaaagacc gcgaatacgt tacccttgag
    16681 caaaaacgct tcatgcccac cgacacaggc gacatcgtca acaaattcct gaccgaacac
    16741 ttcgcccaat acgtcgatta ccacttcacc gccaaactcg aagaccagct tgacgaaatt
    16801 gccgacggca aacgccaatg gattcccttg atggacaaat tctggaaacc gttcatcaag
    16861 caagtggaag aaaaagaagg catcgaacgc gccaaattta ccacgcagga acttgatgaa
    16921 acctgcccga aatgcggcga acacaaactg caaatcaaat tcggcaaaat gggtcgtttt
    16981 gttgcgtgtg ccggttatcc cgagtgcagc tacacgcgca atgtcaacga aaccgccgaa
    17041 gaggccgccg agcgcatcgc caaagccgaa gccgaacagg ccgaactcga cggacgcgag
    17101 tgcccgaaat gtggcggtcg cctagtgtac aaatacagcc gcaccggcag caaattcatc
    17161 ggctgcgcca actatccgaa atgcaaacac gtcgagccgc tggaaaaacc gaaagatacc
    17221 ggcgtccagt gtccgcaatg caaaaaaggc aacctcgtcg agcgcaaatc ccgctacggc
    17281 aaactgtttt acagttgcag cacctatccc gactgcaact acgccacttg gaacccgccc
    17341 gttgccgaag aatgcccgaa ctgccattgg ccggtcttga ccatcaaaac caccaaacgc
    17401 tggggcgtcg aaaaagtctg cccgcaaaaa gaatgcggct ggaaagaaca gattgaaccg
    17461 cccgcgccga aggagtaaga ttaggttggt ttgaaagaga aaaggtcgtc tgaaaaattt
    17521 tcagacgacc tttgcttttc tgtgattggt ttatttgaat ccgcgtgttg ttttaaagtc
    17581 cgataaaatc cggttcattt caggcacaaa caaggcgatg taatcgtaag atagaccgcg
    17641 actggcactg ggatggggaa agcagacgac ttcgcaatct tcaaacgatt ggaatttgac
    17701 attgaaacgt gtaccgtcaa attctttttg caccgtctcc agcggtttgg tctgcttacc
    17761 gaccaactgc tcgaagcgtg gcagtacatt ttggttgttc agaaaatccg ccaacctgct
    17821 gcccatgaag aggatgactt tcggacgcag tttttcgatg tggtagagaa aattatcgat
    17881 gtgctcgggt tgtgtgaact tgtcgggatt gtcgatagtg ttgccctgtg tagcagccca
    17941 gttggtttga accagggatt tttcaaatgc accgcccaat ccattttcgt ctaaggggtg
    18001 tccccacatt tcaaaccaat tttttatcgt attgtcgtaa cgccacttct ttgcctgctc
    18061 tccgaaatag agggatttgt ttgcaaatgt atggtcgatt ttgttttcag ggagtttgta
    18121 ttcacctgct acataagcag cctcatcggc tttactccaa ccccattcat acccacaaat
    18181 cattaaacca tgtttgtcgt tgtagccttt gaacagactg ttgctcaaat tcaaatcctt
    18241 catcatgaac tcttcctttt aaaatttaag agcgattgac ttcaatgttt ttagatgggg
    18301 tggaaaaatc cttgtgtagg caacataaat tcaataaatt tcttgataat tcgaaaccta
    18361 ctaatagcgc acctataaaa gctttttcat tacgttcagc atgacggtca cgtcgttcat
    18421 attttttacg cttgctgttc cctgttatta cagctaagcc aagtgatatg gcgagaattg
    18481 cccaaacaat agtacttaaa taacaatttt ccccatacta tcaataagga aagaaaaaac
    18541 cttttagtat taggtcgata gattataatc catgcccatg aaaatgcaat aagagttata
    18601 cataagatac aagctgacag gatttcttta tttttaatta aataacttag agcgatgagg
    18661 atgacaggtg tcaagaaaat aatagttaca tcccgatagc tataaaagaa aactgcccta
    18721 ttttgaatgt ggagatgtgc acagaatcca atatagctaa ggataatagt taatataata
    18781 aaaaaagacc accaagggtg aagagatagg aattccatgt tttccctttt ttgtaaaaag
    18841 gaaaaaatct tatctaatag ttaattgcct aaccagccag aagaagttta aaatctatcc
    18901 caataattca accatctata cagaaagttc agcttatgga aacccacgaa aaaatccgcc
    18961 tgatgcgcga attgaataaa tggtcccagg aggatatggc ggaaaagctg gcgatgtcgg
    19021 caggagggta tgccaaaatc gaacggggcg aaacgcagtt gaatatcccg cgtttggagc
    19081 agttggctca gattttcaaa atcgatatgt gggacttgct caaatcgggc ggtggtggga
    19141 tggtgtttca gattaatgaa ggtgatagtg gtggcgatat tgcgttgtat gcgtcgggtg
    19201 atgtttcgat gaaaatagaa tttttaaaaa tggagttgaa acactgcaaa gaaatgttgg
    19261 aacaaaaaga caaagaaatc gagctgctcc gcaagctgac cgaaaccgtt taaacagata
    19321 tgccgtctga aaaaagtttt cagacggcat attctttgac aggtcttgta taataccgtt
    19381 tgaacttaca ggtttttgat tatggcggca ggcaaacata ccaaacacag caaccgggta
    19441 cgcattatcg gcgggcaatg ccggggcagg aaattgagtt tcacatccgc cgacggactg
    19501 cgtccgacac ccgacagcgt gcgtgaaaag ctgtttaact ggctgggaca ggatttgacg
    19561 ggtaaaacgg ttttggatct cttcggaggc agcggcgcac tcggtataga agccgcttcg
    19621 cgcaacgcca aacgcgtgct gatttcggat aacaaccgcc aaaccgtgca gaccttgcag
    19681 aaaaacagtc gcgaactggg tttggggcag gtgcaaatcg tctgttcaga cggcatcgca
    19741 tatttgaaga ccgtatccga acagtttgat gttgtctttc tcgacccgcc gtttgcatgg
    19801 caggactggc aaatcctgtt cgatgccttg aagccgtgcc tgaacccccg ggcattcgtc
    19861 tatctcgagg cgggtacgct gccggatatt cccgattggc tgacggaata tagagagggg
    19921 aaatcggggc agagtacatt tgaattaagg gttttccaag tggctgaata atatgcgctt
    19981 tgataatcat ttccgagttg taaacattcg tttgcaaccg tccggttcaa aaaaaccttg
    20041 tgctataatc cgcgcccgcc cggttttgat aatttagtgg aaaaggaaaa gaaatgtcgc
    20101 tttttattac cgacgagtgc atcaactgcg acgtatgcga acccgaatgc cccaatgatg
    20161 ccatttccca aggcgaggaa atttacgaaa tcaaccccaa cctctgcacg cagtgcgtcg
    20221 gacactacga tgagccgcag tgccagcagg tttgcccggt ggactgcatc ctgattgacg
    20281 aagaatatcc cgaaacccat gacgagttga tggcgaaata cgaaaagatt atccagttta
    20341 aataaattct ttttaaaaca tcaaattatg tctgttttga aataaaatca aaaaaaaact
    20401 tgacggaaaa gcaagccgct aataaactaa cgttctcttt tggagggatt cccgagcggt
    20461 caaagggggc agactgtaaa tctgttgcga aagcttcgaa ggttcgaatc cttctccctc
    20521 caccaaaatt cttacttggg gcagtagcga gtaatgcggg tgtagctcaa tggtagagca
    20581 gaagccttcc aagcttacgg tgagggttcg attcccttca cccgctccaa acaattaggc
    20641 ccatgtagct caggggtaga gcactccctt ggtaagggag aggtcggcag ttcaaatctg
    20701 cccatgggca ccatccctcg attattcatt tctttaaggc ttagatatat aggatattgc
    20761 catggctaag gaaaaattcg aacgtagcaa accgcacgta aacgttggca ccatcggtca
    20821 cgttgaccat ggtaaaacca ccctgactgc cgctttgact actattttgg ctaaaaaatt
    20881 cggcggtgct gcaaaagctt acgaccaaat cgacaacgca cccgaagaaa aagcacgcgg
    20941 tattaccatt aacacctcac acgtggaata cgaaaccgaa acccgccact acgcacacgt
    21001 agactgcccg ggccacgccg actacgttaa aaacatgatt accggcgccg cacaaatgga
    21061 cggtgcaatc ctggtatgtt ccgctgctga cggccctatg ccgcaaaccc gcgaacacat
    21121 cctgctggcc cgccaagtag gcgtacctta catcatcgtg ttcatgaaca aatgcgacat
    21181 ggtcgacgat gccgagctgt tggaactggt tgaaatggaa atccgcgacc tgctgtccag
    21241 ctacgacttc cccggcgacg actgcccgat cgtacaaggt tccgcactga aagccttgga
    21301 aggcgatgcc gcttacgaag aaaaaatctt cgaattggct gctgcattgg a
//
LOCUS       DAWKJW010000016        20687 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.016, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000016 DAWKJW010000000
VERSION     DAWKJW010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20687)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20687)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20687
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.016"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(63..239)
                     /locus_tag="WJJ54_000479"
     CDS             complement(63..239)
                     /locus_tag="WJJ54_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341381.1"
                     /translation="MKSRRFFKALLLIAALVGAFYAGMQTQAYLYEDLCLDLGGGKNP
                     GSYPICVIGKVSAR"
     gene            complement(242..1600)
                     /locus_tag="WJJ54_000480"
     CDS             complement(242..1600)
                     /locus_tag="WJJ54_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEZ7341382.1"
                     /translation="MKPLDLNFICQALKLPMPSESKPVSRIVTDSRDIRAGDVFFALA
                     GGRFDAHDFVEDVLAAGAAAVVVSREDCVAMDGALKVDDTLTALQMLAKAWRENVNPF
                     VFGITGSGGKTTVKEMLAAVLRRRFGDNAVLATAGNFNNHIGLPLTLLKLNEKHRYAV
                     IEMGMNHFGELAVLTQIAKPDAALVNNAMRAHVGCGFDGVGDIAKAKSEIYQGLCSDG
                     MALIPQEDANMAVFKTATLNLNTRTFGIDSGDVHAENIVLKPLSCEFDLVCGDERAAV
                     VLPVPGRHNVHNAAAAAALSLAAGLSLNDVAEGLKGFSNIKGRLNVKAGIKGATLIDD
                     TYNANPDSMKAAIDVLARMPAPRIFVMGDMGELGEDEAAAMHAEVGAYARDQGIEAAY
                     FVGDNSVEAAEKFGADGLWFAAKDPLIQVLRHDLPERATVLVKGSRFMQMEEVVEALE
                     DK"
     gene            complement(1725..3371)
                     /locus_tag="WJJ54_000481"
     CDS             complement(1725..3371)
                     /locus_tag="WJJ54_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HEZ7341383.1"
                     /translation="MKQSARIKNMDQTLKNTLGICALLAFCFGAAIASGYHLEYEYGY
                     RYSAVGALASVVFLLLLARGFPRVSSVVLLIYVGTTALYLPVGWLYGAPSYQIVGSIL
                     ESNPAEAREFVGNLPGSLYFVQALFFIFGLTVWRYCVSGGVFADVKNYKRRSKIWLTI
                     LLTLILSCAVMDKIASDKDLREPDAGLLLNIFDLYYDLASAPAQYAAKRAHILEAAKK
                     ASTWHIRHVAPKYKNYVVVIGESARSDYMNVYGFPLPDTPFLSQTKGLLINGYQSTAH
                     ATNLSLPQTLGLPGEPNNNIVSLAKQAGFRTAWLSNQGMLGHFANEISTYALRSDYPW
                     FTQRGDYGKSAGLSDRLLLPAFKRVLIGNAGTKPRLIVMHLMGSHSDFCTRLDKDARR
                     FQYQTEKISCYVSTIAQTDKFLEDTVKILNENKESWSLVYFSDHGLMHVGKGGERTLT
                     HGAWKRQSYGVPLVKISSDDTRREMIKVRRSAFNFLRGFGSWTGIETDELPDDGYDFW
                     GNVPDVQGEGNNLAFIDGLPDDPAPWYAGKGKSTKNTSKK"
     gene            complement(3394..4872)
                     /locus_tag="WJJ54_000482"
     CDS             complement(3394..4872)
                     /locus_tag="WJJ54_000482"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEZ7341384.1"
                     /translation="MFSKLTPLAETGIPTLSCANAAGRLLHSDSRQIKQGDIFVACPG
                     EYADGRSYIPAAVANGAAFVFWDDDGKFAWNPEWKVPNQGIKDLKHRAGILAAQVYGN
                     VSDGLKFWGVTGTNGKTSITQWLAQAADLLGEKTAIVGTVGNGFWGALEETTHTTPAP
                     VDVQTLLYRFRQQGATAAAMEVSSHGLDQSRVNGVSFRSAIFTNLTRDHLDYHGTMEA
                     YGAIKSRLFYWHGLKHAVINVDDEYGAELVGRLKKDCPDLAVYSYGFSEHADIRITDF
                     TASSDGIAAVFQTPWGEGKCRTRLLGRFNAQNLAACIALLCANGYPLDNVLDVLAKIR
                     PASGRMDCIMNSGKPLVVVDYAHTPDALEKALATLQEIKPQGAALWCVFGCGGNRDRG
                     KRPLMGAAAVQGADKVVVTSDNPRLENPHDIINDILPAVPAPECVEADRAAAIRYAVE
                     QAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTRK"
     gene            complement(4897..6642)
                     /locus_tag="WJJ54_000483"
     CDS             complement(4897..6642)
                     /locus_tag="WJJ54_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEZ7341385.1"
                     /translation="MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAIAVLFAGLIA
                     RGLYLQTVTYNFLKEQGDNRIVRTQTLPATRGTVSDRNGAVLALSAPTESLFAVPKEM
                     KEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFV
                     FEKELKRHYPMGNLFAHVIGFTDIDGKGQEGLELSLEDSLHGEDGAEVVLRDRQGNIV
                     DSLDSPRNKAPKNGKDIILSLDQRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEIL
                     ALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNT
                     QPYKIGPSPVRDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGVRM
                     HSGFPGETAGLLRNWRRWRPIEQATMSFGYGLQLSLLQLARAYTALTHDGVLLPVSFE
                     KQAVAPQGKRIFKESTAREVRNLMVSVTEPGGTGTAGAVDGFDVGAKTGTARKFVNGR
                     YADNKHIATFIGFAPAKNPRVIVAVTIDEPTAHGYYGGVVAGPPFKKIMGGSLNILGI
                     SPTKPLTAAAVKTPS"
     gene            complement(6703..6966)
                     /gene="ftsL"
                     /locus_tag="WJJ54_000484"
     CDS             complement(6703..6966)
                     /gene="ftsL"
                     /locus_tag="WJJ54_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HEZ7341386.1"
                     /translation="MNKLNFLLLLAVCVSAFSVVMQQNQYRLNFTALDKAKKQEIALE
                     QDYAQMRLQQARLANHEAIRAAAEKQNLHPPVSGNTFMVAHQR"
     gene            complement(6963..7949)
                     /gene="rsmH"
                     /locus_tag="WJJ54_000485"
     CDS             complement(6963..7949)
                     /gene="rsmH"
                     /locus_tag="WJJ54_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEZ7341387.1"
                     /translation="MSGAESYRHITVLLNEAVDALAVREDGVYVDGTFGRGGHSRLIL
                     SRLGDAGRLIVFDKDPQAIAVAEELARSDKRVGVVHGGFASFQTALDGLGIGKVDGAL
                     FDLGISSPQIDDGSRGFSFRFDAPLDMRMDTTRGMSAAEWIAVASEQDLHEVIKNYGE
                     ERFSRQIARAIVAQRAESPIDTTRKLAQIVAQNVRTRERGQDPATRTFQAVRIFINRE
                     LEEVGAVLPQVMCRLKEGGRLAVIAFHSLEDRIVKQFVKKYSQHAPLPRWAAVREADL
                     PEPPLKIVGRALKPGEAEIAANPRARSAVLRVAERTAGSIPEQSQRKTSEWQ"
     gene            complement(7946..8401)
                     /gene="mraZ"
                     /locus_tag="WJJ54_000486"
     CDS             complement(7946..8401)
                     /gene="mraZ"
                     /locus_tag="WJJ54_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HEZ7341388.1"
                     /translation="MFGGAHELSIDSKGRLAVPAKFRDILSRLYTPAVVVTLESKHKL
                     LMYPVAEWEKVAAQLLNLKVADNPVLRRFQNLLLHNAEILEWDSAGRVLLPAGLRKRV
                     DFDREVVLVGRANRLELWGREQWEAEMVQALDDDPDELAFQLGQTDLQL"
     gene            8680..9897
                     /locus_tag="WJJ54_000487"
     CDS             8680..9897
                     /locus_tag="WJJ54_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ7341389.1"
                     /translation="MTAPVPTCNMSGNPINLHKLTLIMPLPLPSPEARQFSLKLQTLI
                     AEEIGKHGNWIPFSRFMELVLYAPQYGYYTGGSHKIGNTGDFITAPTLTSLFAQTLAR
                     QLQELLSQTAGNIYEFGAGTGQLAADLLGSISDGISRYYIIEISPELAARQKNLIQAR
                     APEASQKVVHLTALPEAFDGIIIGNEVLDAMPVEIVRKNEGGSFEHVGVCTDNGRFAY
                     SARPLHDPSLPTSASLYFPQTDYPYTSELHPQQYAFIRTLASRLEHGCMIFIDYGFDA
                     AQYYHPQRNQGTLIGHYRHHVIHNPFDFIGLADLTAHVNFTDIAQAGTDAGLDLIGYL
                     PQSHFLLNLGITELLAQTGKTNSAAYIREAAAVQKLIDQHEMGELFKVIAFGKNIGID
                     WAGFRFGDICHKL"
     gene            10029..10105
                     /locus_tag="WJJ54_000488"
     tRNA            10029..10105
                     /locus_tag="WJJ54_000488"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10063..10065,aa:Met,seq:cat)
     gene            10113..10188
                     /locus_tag="WJJ54_000489"
     tRNA            10113..10188
                     /locus_tag="WJJ54_000489"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10146..10148,aa:Ala,seq:ggc)
     gene            complement(10479..11300)
                     /locus_tag="WJJ54_000490"
     CDS             complement(10479..11300)
                     /locus_tag="WJJ54_000490"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEZ7341390.1"
                     /translation="MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIGFHSNHK
                     VFEIAIQLGAVLAVVFEYRQRFSNVLHGLGKDRKANRFVLNLAIAFIPAAVMGLLFGK
                     QIKEYLFNPLSVAVMLVLGGFFILWVEKRQSRAEPKIADVDALRPIDALMIGVAQVFA
                     LVPGTSRSGSTIMGGMLWGIERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVG
                     LILIGFIAAFVSGLVAVKALLKFVSKKNYIPFAYYRIVFGIVIIILWLSGWISWE"
     gene            complement(11333..11977)
                     /locus_tag="WJJ54_000491"
     CDS             complement(11333..11977)
                     /locus_tag="WJJ54_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ7341391.1"
                     /translation="MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQSGKIE
                     VLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSGL
                     KYQANPAVFKAVYEQKIRLENRAVAGKWALSQKQFDGKKLMRAYDSPEAAAAALKMQK
                     LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK"
     gene            complement(11980..12825)
                     /gene="ftsN"
                     /locus_tag="WJJ54_000492"
     CDS             complement(11980..12825)
                     /gene="ftsN"
                     /locus_tag="WJJ54_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HEZ7341392.1"
                     /translation="MNKFSQSGKGLSGFFFGLILATVIIAGILFYLNQSGQNAFKIPA
                     SSKQPAETEILKPKNQPKEDIQPEPADQNALSEPDAATEAEQSDAEKAADKADEVEEK
                     AGEPEREESDGQAVRKKVLTEEREQTVREKAQKKDAETVKKQAVKPSKETEKKAPKEE
                     KKAEKEKVAPKPTPEQILNSGSIEKARSAAAKEVQKMKTSDKAEATHYLQMGAYADRR
                     SAEGQRAKLAILGISSKVVGYQAGHKTLYRVQSGNMSADAVKKMQDELKKHEVASLIR
                     SIESK"
     gene            complement(12931..14427)
                     /locus_tag="WJJ54_000493"
     CDS             complement(12931..14427)
                     /locus_tag="WJJ54_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEZ7341393.1"
                     /translation="MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKE
                     SRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGRFDLPIAIGILAASGQVAPEKLA
                     EYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
                     GEVAAHLNGIEPLAQTECQVPQMPFEHGGQPDLCDVKGQHTARLALEIAAAGGHSLLM
                     MGPPGTGKSMLSQRLPGILPPLTEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSAS
                     AAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLENGEIHISRAARQA
                     VYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSL
                     SAAELMQQEAGESSASVLERVIAARDKQYARQGKVNAALSVSELDSQARIQKEAQEAL
                     GGLLEKLSLSARSFHRIMRVARTLADLAGDEEVGRSHVMKAIGFRRAL"
     gene            complement(14441..14761)
                     /locus_tag="WJJ54_000494"
     CDS             complement(14441..14761)
                     /locus_tag="WJJ54_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HEZ7341394.1"
                     /translation="MFGKQLFEEVGSKISETIANSPAKDVEKNIKAMLGGAFNRMDLV
                     TREEFDIQQQVLIKTRTKLAALEARLAKLEAAQNPERAALEAAEAAAEEAVAEIRQQT
                     EAGE"
     gene            15244..16770
                     /gene="putP"
                     /locus_tag="WJJ54_000495"
     CDS             15244..16770
                     /gene="putP"
                     /locus_tag="WJJ54_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HEZ7341395.1"
                     /translation="MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVT
                     AMSAGASDMSGWLLMGLPGAIYLSGLNEAWIAIGLLVGAYFNWLLVAGRLRVHTEYAN
                     NALTLPDYFFHRFGAGGHLMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQ
                     AMWLGAGATIAYTFLGGFLAVSWTDTLQASLMIFALILTPVMVYLGLGGAEQMSAAIQ
                     SVAAGTGKEYGSLFAGTTVIGIISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIG
                     MTWMALCLAGAVAVGYFGIAYFGANPDKVSSMSGNHERIFIALSTLLFNPWIAGIILS
                     AILAAVMSTLSCQLLVCSSAITEDFYKGFLRKNAQQSELVWVGRLMVLAIAVISILIA
                     SDPNSKVLGLVSYAWAGFGAAFGPIVILSVLWKRITAYGALSGMVAGALTVVVWAEWI
                     KKPAQAAGESGLLTMYEIVPGFIVCLIIAVLVSLFNKEPSREIQKRFEKADSDYRAAR
                     "
     gene            complement(16860..17027)
                     /locus_tag="WJJ54_000496"
     CDS             complement(16860..17027)
                     /locus_tag="WJJ54_000496"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341396.1"
                     /translation="MKHFLDSPKFFGGQAASVRPEYGNIVINPQMKYKASNAGRVGAS
                     VSLKMKRVKHK"
     gene            17019..20624
                     /gene="putA"
                     /locus_tag="WJJ54_000497"
     CDS             17019..20624
                     /gene="putA"
                     /locus_tag="WJJ54_000497"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HEZ7341397.1"
                     /translation="MFHFAFPAQTALRQAITDAYRRNEIEAVQDMLQRAQMSDEERNA
                     ASELARRLVTQVRAGRTKAGGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRL
                     IADKISDGNWKSHLNNSPSLFVNAAAWGLLITGKLTATNDRQMSSALSRLISKGGAPL
                     IRQGVNYAMRLLGKQFVTGQTIEEALQNGKEREKMGYRFSFDMLGEAAYTQADADRYY
                     RDYVEAIHAIGKDAAGQGVYEGNGISVKLSAIHPRYSRAQHGRVMGELLPRLKELFLL
                     GKKYDIGINIDAEEANRLELSLDLMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYL
                     IDLARRNNQKLMIRLVKGAYWDSEIKWAQVDGLNGYPTYTRKVHTDISYLACARKLLS
                     AQDAVFPQFATHNAYTLGAIYQMGKGKDFEHQCLHGMGETLYDQVVGPQNLGRRVRVY
                     APVGTHETLLAYLVRRLLENGANSSFVNQIVDENISIDTLIRSPFDTIAEQGIHLHNA
                     LPLPRDLYGKCRLNSQGVDLSNENVLQQLQEQMNKAAAQDFHAASIVNGKARDVGEAQ
                     PIKNPADHDDIVGTVSFADAALAQKAVGAAVAAFPEWSATPAAERAACLRRFADLLEQ
                     HTPALMMLAVREAGKTLNNAIAEVREAVDFCRYYANEAEHTLPQDAKAVGAIVAISPW
                     NFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIAGYAVSLMHEAGIPTSALQLVLGAGD
                     VGAALTNDARIGGVIFTGSTEVARLINKALAKRGDNPVLIAETGGQNAMIVDSTALAE
                     QVCADVLNSAFDSAGQRCSALRILCVQEDVADRMLDMIKGAMDELVVGKPIQLTTDVG
                     PVIDAEAQQNLLNHINKMKGVAKSYHEVKTAADVDSEKSTFVRPILFELNNLNELQRE
                     VFGPVLHVVRYRADKLDSVIDQINSKGYALTHGVHSRIEGTVRHIRSRIEAGNVYVNR
                     NIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQKLTRIPEWVAPTLSQIGQADEAALKRL
                     EALVHKLPFNAEEKKAAAAALGHARIRTLRRAETVLTGPTGERNSISWHAPKRVWVHG
                     GSLLQAFCALTELAASGVQAVVEPDSPLASYTADLEGLLLVNGKPETADISHVAALSP
                     LDSARKQELAAHDGALIRILPSENGLDILQVFEEISCSVNTTAVGGNASLMAVAD"
BASE COUNT         4831 a         5995 c         5054 g         4807 t
ORIGIN      
        1 cgggcctgcg cccgtttgag gttggcttgc cgcccggcaa ggtttcggac ggcttttgca
       61 gattaacgtg cagagacttt cccaatcacg caaatcgggt aactccccgg atttttgccg
      121 ccacccaagt ctaaacataa atcttcataa agatacgcct gcgtctgcat tccggcataa
      181 aacgcgccga ccagcgcggc aatcaacaat aaggctttaa aaaaacgtcg acttttcatt
      241 ttcacttatc ctccaatgcc tcgaccactt cttccatctg cataaagcgc gaacctttca
      301 ccaacacggt ggcgcgttcg ggcaaatcgt ggcgcaacac ttgaatcaac gggtctttgg
      361 cggcgaacca caaaccgtcc gcgccaaatt tttccgccgc ttcgacgctg ttgtcgccga
      421 caaaataagc cgcttcgatg ccttggtcgc gagcatacgc gccgacttcg gcgtgcatgg
      481 cggcggcttc gtcctcaccc agttcgccca tatcgcccat cacgaaaata cgcggcgcag
      541 gcatacgcgc caacacgtca atcgcggctt tcatgctgtc gggattcgca ttataagtat
      601 cgtcaatcag ggtcgcgccc ttgatgccgg ctttgacgtt cagacggcct ttgatattgc
      661 tgaagccttt caaaccttcc gccacatcgt tcaaactcaa acctgcagcc aaagacagcg
      721 cggcggcagc ggcggcgttg tggacattgt ggcggccggg aacaggcagc accacggcgg
      781 cgcgttcgtc gccgcacacc aaatcaaatt cgcacgacaa cggtttcagc acgatatttt
      841 ccgcgtggac atcgccgcta tcgatgccga aagtgcgcgt attcaaatta agcgttgccg
      901 ttttgaagac agccatattg gcatcttctt gaggaatcag tgccatgccg tctgaacata
      961 agccttgata aatctcgctt ttcgctttgg caatatcgcc cactccgtcg aaaccgcagc
     1021 cgacatgggc gcgcatggcg ttgttgacca atgcggcatc gggtttggcg atttgtgtca
     1081 aaaccgccag ttcgccaaaa tggttcatac ccatttcaat cacggcatag cggtgttttt
     1141 cgtttaattt caacaaagtc aacggcaatc cgatgtggtt gttgaagttg cctgccgtcg
     1201 ccaaaacggc attatcgccg aaacggcggc gcaataccgc agccaacatt tccttcaccg
     1261 tcgtcttgcc gcccgagccg gtaataccga acacaaacgg gttcacattc tcgcgccacg
     1321 ccttcgccaa catttgcaac gcggtaagcg tgtcatcgac tttcaacgcg ccatccattg
     1381 caacgcaatc ttcgcgcgaa accacaaccg ccgccgcacc agcagccaat acgtcttcaa
     1441 caaaatcatg cgcatcaaac cgcccgcccg ccaatgcgaa aaacacatcg cccgcgcgga
     1501 tgtcgcggct gtcggttacg atgcgcgaca cgggtttgct ttcagacggc atcggaagct
     1561 tgagggcttg gcagatgaaa tttaggtcca gtggtttcat atttactttc gttaatattc
     1621 gggcggcgga cacatcggta gcggctgatt tttttatcgc ctgttttgct gtggtaaaac
     1681 acagattatt ttcccattct cattcggcat tttttctgta cgtatcattt tttagacgta
     1741 tttttagtcg atttgccttt tcccgcatac cacggcgcgg ggtcgtcggg cagtccgtcg
     1801 ataaaggcaa ggttattgcc ttcgccctgc acatcgggaa cattccccca aaaatcatag
     1861 ccgtcatcgg gcaactcgtc ggtttcgata cccgtccaac tgccgaatcc gcgtaaaaaa
     1921 ttaaacgcgc tgcgcctcac tttaatcatt tcgcgccgcg tgtcatcgga cgaaatttta
     1981 accagcggca cgccgtagct ttgacgcttc cacgcaccat gtgtcaacgt tcgctcgccg
     2041 cctttaccga catgcatcaa accgtggtcg gaaaagtaaa ccaaagacca gctttcttta
     2101 ttttcattca atatcttaac tgtatcttct aaaaatttat cggtttgcgc gatggtggaa
     2161 acatagcagg atattttttc agtttgatac tgaaaccgcc gcgcatcctt atccaaacgt
     2221 gtgcaaaaat cactgtgcga acccatcagg tgcatcacaa tcagccgagg cttcgtgcct
     2281 gcatttccta tcaaaacccg tttgaacgcc ggcaacaaaa ggcggtcgct caaccccgcg
     2341 cttttgccat aatcacccct ttgggtaaac cacggataat cgctgcgtag ggcataggtg
     2401 gaaatttcgt tggcaaaatg ccccaacatt ccttgattag acagccacgc cgtccgaaaa
     2461 cccgcctgct tcgccaagct gacgatgtta ttgttcggtt ctcccggcag ccccaaagtc
     2521 tgcggcagcg aaagattcgt cgcgtgggcg gtcgattggt aaccgtttat caacagccct
     2581 ttggtctgac tcaaaaaagg cgtatcgggc aatgggaaac cgtaaacatt catataatcc
     2641 gaacgcgcgc tctcaccgat aaccacaaca taatttttat acttgggcgc aacatgacgg
     2701 atatgccatg ttgacgcttt ttttgctgct tccaaaatgt gggcgcgctt ggcggcatat
     2761 tgtgccggcg cggaagccaa atcgtaatac aggtcgaaaa tattcaacaa caggccggca
     2821 tcaggttctc gcaaatcttt atcgctggcg attttatcca tcaccgcgca ggacaaaatc
     2881 aaagtcaata atatagtcag ccatattttg ctgcggcgtt tatagttttt tacgtcagca
     2941 aatacccccc ccgatacaca atatctccaa actgtcaagc caaaaatgaa aaataatgcc
     3001 tgcacaaaat aaagcgaccc gggaagattg ccgacaaatt cacgcgcctc ggcaggattg
     3061 ctttccaata tcgaaccgac tatctgataa gacggcgcac catacagcca gccgaccggc
     3121 aaatataggg cggttgtgcc gacgtaaatc agtaaaacaa ctgaagaaac gcgcgggaaa
     3181 ccgcgtgcca ataataataa aaatacaacc gaagccaaag cacccacggc agaataacgg
     3241 tagccgtatt catattccaa gtgataacct gatgcgatgg ccgcgccaaa acaaaaggct
     3301 aaaagcgcgc aaatgcccaa tgtatttttt aatgtctgat ccatattttt tattcgggcg
     3361 gattgtttca tacgatgccg tccgaatatc ccattattta cgagttaaca aagcctgtcc
     3421 gacgatttca agatcggaaa aacggtgctt cacgccttgt acatcctgat agttttcatg
     3481 ccctttgccg gcaatcagga tgatgtcgtt tgcggcggct tgttcaaccg cataacggat
     3541 ggcggcggca cggtcggctt cgacgcattc gggcgcggga acggcaggca ggatgtcgtt
     3601 gatgatgtcg tgcggatttt ccaaacgcgg attgtcgctg gtgacgacga ctttatccgc
     3661 gccctgtacg gctgccgcgc ccatcagcgg gcgtttgccg cgatcgcggt tgccgccgca
     3721 accgaatacg caccacaaag ccgcaccctg cggtttgatt tcctgcaagg tggcgagtgc
     3781 tttttccaat gcgtcgggcg tatgggcata atcgacaacg accaaaggtt tgccgctgtt
     3841 catgatgcag tccatgcgcc ctgaagcggg acggattttt gccagcacat ccaatacatt
     3901 atcaagcgga tagccgttgg cgcacagcaa ggcgatgcag gcggcgaggt tttgcgcgtt
     3961 gaaccgtccg agcaggcgcg tgcggcattt cccttcgccc cacggggttt ggaatacggc
     4021 tgctatgccg tctgaagagg cggtaaagtc ggtaatgcgg atgtcggcgt gttcgctgaa
     4081 gccgtagctg taaacggcca aatcgggaca gtcttttttc agacgaccta cgagttccgc
     4141 gccgtattcg tcatctacat tgataacggc gtgtttcaag ccatgccagt aaaacaggcg
     4201 cgacttgatg gcgccatagg cttccatcgt gccgtggtag tcgaggtggt cgcgggtgag
     4261 gttggtaaag attgcgctgc ggaatgacac gccgttgacg cgcgactggt caagcccgtg
     4321 gctggagact tccatcgcgg cggctgttgc gccttgttga cggaaacggt agagcagggt
     4381 ttggacatcg acgggggcgg gtgtggtatg cgtggtttct tccaatgcac cccaaaagcc
     4441 gttgccgacc gtgccgacaa tggcggtttt ttcgcccaac aaatcggcag cttgcgccag
     4501 ccattgcgtg atggaggttt tgccgttggt tccggttacg ccccagaatt tgagaccgtc
     4561 tgaaacgttg ccgtaaactt gcgccgccaa tatgccggca cggtgtttca aatctttgat
     4621 gccttgattg gggactttcc attcgggatt ccacgcaaat ttgccgtcgt cgtcccaaaa
     4681 aacaaaagcc gcgccgttgg caacggcggc ggggatataa ctgcgtccgt cggcatattc
     4741 gcccggacag gcaacgaaaa tatcgccttg tttgatttgg cggctgtctg aatgcaacaa
     4801 acgccctgcc gcgtttgcac acgacagggt cgggatgccg gtttcagcca aaggggttaa
     4861 cttgctgaac ataaaacaat ctcgttgata ctcggattaa gacggtgttt tgacggctgc
     4921 ggcggtcagg ggcttggtcg gagaaatgcc caagatgttc aggctgccgc ccataatttt
     4981 tttgaagggc ggccctgcca ctacgccgcc gtaataaccg tgggcagtcg gttcgtcaat
     5041 ggttaccgcc acaatcacac gggggttttt ggcgggggca aaaccgataa aggtagcgat
     5101 gtgtttgttg tcggcataac gcccgttgac gaacttgcgc gccgtgccgg ttttcgcgcc
     5161 gacatcgaaa ccgtccaccg cacccgccgt accggtgccg cccggctcgg ttacggaaac
     5221 catcagattg cgtacctcgc gcgcggtcga ttctttgaat atgcgtttgc cttgcggcgc
     5281 aaccgcctgt ttttcaaagc tgaccggcag taaaacgccg tcgtgcgtca gtgcggtata
     5341 ggcgcgcgcc aattgcagca ggctcaattg caggccgtaa ccgaaagaca tcgtcgcctg
     5401 ttcgataggc cgccacctgc gccaatttct caacaaacct gcagtttcgc ccggaaagcc
     5461 cgagtgcata cgcacaccga tgcccaactc atgatagaag tcatacattt cttcggcacc
     5521 gaaacgcgca gacagtttgc ttgtgccgac gttggacgat ttctgcatga tgccgcgcac
     5581 atccaaagag gggtaaacat gggtatcgcg cacgggagac ggtccgattt tataaggctg
     5641 cgtattcagc cgttcgttca aatcggtttt gcccgcatcc aatgctttcg caatcacaaa
     5701 cggtttgatt gccgaaccgg gttcgatcat atcggttacg gcacggttgc gccgctgttc
     5761 gctgtctgcc cggccgggcc tgttgggatc gtaggcgggc gtattggcca aggcgaggat
     5821 ttcccccgtg cgggcatcca aaaccaccac cgttccggct tttgcctgat ggtattcgac
     5881 cgccttgttc aactcttcat aggccaaggt ctgaatcctc tgatcgaggg aaaggatgat
     5941 gtctttgccg tttttcgggg ctttattgcg cggggagtcc aagctgtcca caatattgcc
     6001 ctgccggtcc cgcaaaacga cttccgcgcc gtcttcgcca tgcaggctgt cttcaagcga
     6061 aagttccaaa ccttcctgac ctttgccgtc aatatcggta aatccgatga cgtgtgcaaa
     6121 caggttgccc atcgggtaat ggcgttttaa ttctttttca aatacaaagt tttccaaacc
     6181 caaggctttg acctcttcgg caaccttggg atcgagctgc cgcttaatcc agataaacga
     6241 cttgcctttc tgttcgagct tgttcctcaa aacatcaacc ggcacatcga caagctcgga
     6301 caggcgttcc aattgtgcgg cagacggcat ttccttcatc tctttaggca cggcaaacag
     6361 ggactccgtc ggcgcactca acgccaaaac cgcaccgttc cggtccgaaa ccgtaccgcg
     6421 tgtagccggc aatgtttgag tccgcacaat ccggttgtcg ccctgttctt tcaaaaagtt
     6481 atacgttacc gtctgcagat acagtccgcg agcaatcaga ccggcaaaca agaccgctat
     6541 tgccatcagg acgaagctga tccgtccgtt actggtcatc ggctttttga cctgctcttc
     6601 tttgggcagc atccgaggct tatattcgct cttaatcaac atttttactt ctcgttatta
     6661 ttatcctgac gcaggaatcc gattccggca cacaggctgc ttctatcttt gatgcgccac
     6721 cataaaggta ttgcccgaaa ccggcggatg gaggttttgt ttttctgccg ccgccctgat
     6781 cgcttcgtgg ttcgccaaac gcgcctgttg cagcctcatt tgcgcataat cctgctccaa
     6841 ggcgatttcc tgttttttcg ccttgtccaa agctgtgaag ttgagcctgt actggttttg
     6901 ctgcatcaca acggaaaaag cggaaacgca caccgcaagc agcagaagga aattcaattt
     6961 gttcattgcc attcagacgt ttttctctgt gattgttccg gtatcgaacc ggcagtccgc
     7021 tccgccacac gcaaaaccgc acttctcgcc ctcggattgg cggcaatttc cgcctcaccc
     7081 ggctttaatg ccctgcccac gattttcagg ggcggctcgg gcaaatccgc ttccctgacc
     7141 gccgcccagc gcggcagggg cgcgtgttgc gaatattttt tgacaaactg cttcacaatg
     7201 cggtcttcca acgaatggaa agcaatgacc gccaaacgtc cgccctcttt cagacgacac
     7261 atgacctgcg gcaatactgc ccctacttct tcaagctcgc ggttaataaa gatgcggacc
     7321 gcctggaagg tgcgcgtcgc aggatcctgc ccccgctcgc gagtacggac gttttgtgcc
     7381 acgatctgcg ccagcttgcg ggttgtatcg attggacttt ccgcccgttg cgcaacaatg
     7441 gcgcgcgcaa tctggcggct aaaccgctct tcaccataat tcttgattac ctcgtgcaaa
     7501 tcctgttccg acgcaaccgc tatccactct gcggcagaca taccgcgcgt cgtatccata
     7561 cgcatatcca aaggggcatc gaaacggaag ctgaaaccgc ggctgccgtc atcgatttgc
     7621 ggggacgaaa tccccaaatc aaacagcgca ccgtccacct tgccgatacc caaaccgtcc
     7681 aatgccgtct gaaacgaagc aaaaccgcca tgcacgacac cgacccgttt gtccgaacgc
     7741 gccagctctt ctgccacagc aatcgcctga gggtctttgt cgaaaacaat caaccgcccc
     7801 gcatcgccca aacgcgacaa aatcagccgg gaatgccctc ccctgccgaa cgtaccgtcc
     7861 acatagacac cgtcttcgcg cacggcaagc gcatccaccg cctcattcag caagaccgtg
     7921 atatgccggt aactttctgc tccactcaca attgcaaatc cgtctgaccc aactggaagg
     7981 caagttcgtc aggatcgtca tccaaagcct gaaccatctc agcctcccac tgctcgcgac
     8041 cccaaagctc caaacggttg gcacgaccga ccaaaacgac ttcacggtcg aaatccaccc
     8101 ttttcctcag tccggcagga agcagcaccc ggccggcgct gtcccattcc aaaatttccg
     8161 cgttatgcag caaaagattt tgaaaccgcc gcaaaacagg gttatccgcc acttttaagt
     8221 ttaaaagttg cgccgcaacc ttttcccact ccgcaacagg gtacatcaac agcttgtgtt
     8281 tcgactcgag cgttaccact acggcaggcg tatagaggcg cgacagaatg tcacggaatt
     8341 tggcaggaac agccaaccgc cccttactgt cgatgcttaa ttcgtgtgcg ccgccgaaca
     8401 tgacatgtcc caagccgaaa tcaaaatcac aagggtaaaa gagacacttt gccccacaat
     8461 tccccaccaa tcgacactat aagaaatttt aaacactcgg tcaaatcagg gcatgaaaac
     8521 tcattaacat atctgaaatt tttattcctt ttaaaaacaa taagataaaa aatgacgaca
     8581 acggcacggc gggtgcggta cagaataatc gaaccaataa acaactatat atgattaatt
     8641 taataatata aacacaatat atagtattaa gataaagcca tgacagcacc cgtaccaacg
     8701 tgtaatatgt cgggaaatcc aataaattta cacaagctaa cacttatcat gcccctcccc
     8761 ctcccctctc ccgaagcacg gcaattctcg ctcaaactgc aaaccctcat tgccgaagaa
     8821 atcggcaaac acggcaactg gattccattt tcacgtttta tggaattggt tttatacgct
     8881 ccgcaatacg gctactacac cggcggcagc cataaaatcg gcaataccgg ggattttatt
     8941 accgcaccga ccctcacctc tctgtttgca cagacactgg cacgccaact tcaagaactt
     9001 ctatcccaaa cggcgggcaa tatctatgaa ttcggcgcgg gaaccggaca gcttgccgcc
     9061 gatttgttgg gcagcatttc ggacggcatc agccgttact atattattga aatatcgccg
     9121 gagctggcag cacgtcagaa aaacctgatt caagcccgcg caccggaagc atctcaaaaa
     9181 gttgtccact tgaccgcact tcccgaagcg tttgacggca tcatcatcgg caacgaagta
     9241 ctcgatgcca tgcctgtcga aatcgtccgt aaaaatgaag gcggctcatt cgagcatgtc
     9301 ggcgtttgca cggacaacgg ccgtttcgcc tattctgcaa gacccttgca cgacccgtcg
     9361 cttcccacct cggcttccct ctattttcct caaacagatt atccctacac cagcgaacta
     9421 catccgcaac aatatgcctt tatccgcacc cttgcctcaa gactcgaaca cggctgcatg
     9481 atattcatcg actacggttt tgatgcagcg cagtattacc acccgcaacg caatcaaggt
     9541 actctaatcg gacactaccg acatcacgtt atccacaatc cttttgactt catcggattg
     9601 gccgacctga ccgcgcatgt caactttacc gacattgccc aagccgggac ggatgccgga
     9661 ttagatttga taggttacct tccccaatcc catttcttat tgaacctggg cattaccgag
     9721 ctattggcac agacggggaa aacgaattcg gcagcctata tccgtgaagc tgctgccgtt
     9781 cagaaactga ttgaccagca cgaaatgggc gaactgttta aagtcatcgc attcggaaaa
     9841 aatatcggca tcgactgggc aggattccgc ttcggcgaca tctgccacaa actctaaccc
     9901 tcatgccgcc tgaatccgct tcagacgaca taaacttttt aacatttaaa aacagtcaac
     9961 taattcaaaa ttaaaaaata cggcttgtca aaaaaacaga aaaacatata atagcgtctt
    10021 cacgaaacgg cgaattagct cagtcggtta gagcagagga atcataatcc ttgtgtccgg
    10081 ggttcgagtc cctgattcgc caccaaattt tcgggggtat agctcagttg gtagagcgct
    10141 tgcatggcat gcaagaggtc agcggttcga tcccgcttac ctccaccaga taaaaaagca
    10201 cagaccgtaa aaaggtatgt gcttttttat tacctgattg ccgggaaata aagaacaaac
    10261 cactgccttc aaaacaggca atcgacttta aacctatcgc cccgcctgtc ctgattttat
    10321 agtgaattaa atttaaaccg gtacagcgtt ggctcgcctt gccgtactat ctgtactgtc
    10381 tgcggcttcg tcgccttgtc ctgatttttg ttaattcact atatcagccc gccagacaaa
    10441 cccgacccga ataatgtctt caggtcgggt ttatggtttc attcccaact tatccagccc
    10501 gacaaccaca atattatgat gacgatgccg aaaacaatgc ggtaataggc aaacgggata
    10561 tagtttttct tggaaacaaa cttcagcagt gctttgaccg ctactaaacc ggaaacaaaa
    10621 gcggcaataa agcctatcag aatcaaaccg acatcatgca gggtgaaaaa ccggtaatgt
    10681 ttcaggacat cataagccgt tgcggcaacc atcatcggaa cggccaagaa aaatgaaaac
    10741 tccgttgccg ttttccgctc gattccccaa agcatcccgc ccataatcgt actgcccgaa
    10801 cgggacgtac ccggaaccag tgcaaacact tgggcaacgc cgatcatcaa ggcatcaatc
    10861 ggacgcaatg catcaacatc ggcaatttta ggctctgctc ggctttggcg tttctccacc
    10921 cacaaaataa aaaaaccgcc caaaaccagc atgactgcaa cactcaaggg gttaaacaga
    10981 tactctttga tttgtttgcc gaacaacagc cccatcacgg cggcaggtat aaaagcaatg
    11041 gcaagattaa ggacgaagcg gttggctttc cggtcttttc ccaagccgtg caacacattg
    11101 ctgaaacgtt gccggtattc aaacactacc gccaaaactg caccgagctg gatggcaatt
    11161 tcaaaaacct tgtgattgct gtgaaaacca atcagattgc cgaacacaat caaatgtccg
    11221 gtgctggaaa tcggtaaaaa ttcggtaaaa ccttctacca agcccatcat cagggctttc
    11281 aggacaatca gaaaatccat tgcttgcgct tctttcggat acgggagttc ggctatttct
    11341 gtacagcagg ggtctgacgc ttgcgttctt ccctgacttt ggcaaccaat tctttaatcg
    11401 tatgaacgcc gccgtcaaag ccgttattga agataacgcg gtattttccg ccgacaataa
    11461 cggtcggcgt gctgtcaata ccgtattgtt ccgtcagttt ctgcattttt aatgctgctg
    11521 ctgcggcctc gggagaatca taggcgcgca tcagtttttt gccgtcaaac tgcttttggg
    11581 acaaagccca ttttccggca acagccctgt tttccaagcg gattttttgt tcgtaaactg
    11641 ctttaaacac agcagggttt gcctgatatt tcaaacccga caaattgacg gcagccgcca
    11701 ttcttgccag accgagcatt tcaggctgcc agaccacgtg ctccgtcctc aaataggcat
    11761 cagacggcaa tgccttgccc agtttcaata acaaaggatc gaaatgatgg caatgtacgc
    11821 agaaatagcc gaaaaattcc aaaacctcaa ttttacccga ctgttcttga ggaatgggtt
    11881 tatccaacac aagatagtct tccccttccg tcagggcata tgcctgcgcg gacaacactg
    11941 ccgacagcag cagcggcaac agatgtttga gcttcataat tatttacttt cgatagaacg
    12001 gatcaggctg gcgacttcat gttttttcaa ctcgtcctgc atttttttca ccgcatcggc
    12061 agacatattg ccgctttgca cccggtaaag cgttttatgt cccgcctgat agccgaccac
    12121 cttggaagat atgcccaaga ttgccagttt ggcacgctgc ccttccgcgc tccggcggtc
    12181 ggcatacgcg cccatttgca gataatgcgt tgcttccgcc ttgtcggacg ttttcatttt
    12241 ctgcacttct ttggcggcgg cactgcgcgc tttttcgatg ctgccgctgt tgaggatttg
    12301 ttccggggtc ggtttgggtg caactttttc cttttccgcc tttttctctt cttttggagc
    12361 ttttttctct gtttctttag acggttttac cgcttgtttt ttaaccgttt cggcatcttt
    12421 cttctgcgct ttttctctga cggtttgttc acgctcttcc gtcagcactt tcttacgcac
    12481 tgcctgtccg tccgactctt cccgttccgg ctcgcccgcc ttttcttcaa cctcgtcggc
    12541 tttatcggca gctttttccg catccgactg ctctgcctct gtcgcagcat ccggttcgga
    12601 caaggcgttt tgatcggccg gttcaggttg gatgtcttcc ttaggctggt ttttcggttt
    12661 caggatttcc gtttctgcag gctgcttcga cgaagccggg attttgaacg cattttgacc
    12721 gctctggttc agataaaaca aaataccggc aataatgacc gtcgccagta tcaaaccgaa
    12781 gaaaaaaccg gacagacctt ttccggattg ggaaaatttg ttcataaaca taccttaatg
    12841 tgtttcagac ggcattaacg ccgtttgctt acgggcggat attctaacaa tatcgccata
    12901 tttgggcaaa acctgcttcc attcccattc ctataaagca cgacggaaac ctatggcttt
    12961 catgacgtgg cttctgccga cttcttcgtc gccagccaaa tccgccaatg tacgcgccac
    13021 gcgcatgatg cggtggaagc tgcgggcgga aagggagagt ttttccagca ggccgcccaa
    13081 tgcttcctgc gcttcttttt ggatgcgggc ttgggaatcg agttcgctga cgctcaaagc
    13141 ggcgttgact ttgccctgcc gtgcgtattg tttgtcgcgg gcggcgataa cgcgttccaa
    13201 aacggacgcg ctgctttcgc ccgcttcctg ctgcatcagt tcggcggcgg acaggctggg
    13261 gacttcgatg gtcaaatcga tgcggtcgag cagcggcccg gaaatcttgc tgcggtaacg
    13321 cgcgacgctt tcgggcgtgc agcggcaggg tttgacggga tgcccgagat aaccgcacgg
    13381 gcaggggttc atggcggcaa caagttggaa tttggcagga tagacggctt ggcgcgccgc
    13441 gcgggaaatg tggatttcgc cgttttccaa cggttcgcgc aaaacttcca aaactttgcg
    13501 gtcgaactcg ggcagctcgt ccaaaaacaa tacgccgtgg tgcgccaatg aaatctcgcc
    13561 cggacgcggg tcggaaccgc cgccgaccat agccgccgcg ctggcgctgt gatgcggact
    13621 gcggaaagga cggttgctgt cgagttgttg ctggtggttg ggcaggagcg aacgcaatgc
    13681 ccaaacttct accaattcgt cttcggtcag cggcggcagg atgccgggca gccgttggga
    13741 gagcatagac ttgcccgttc ccggcggacc catcatcaag aggctgtgtc cgcctgcggc
    13801 agcgatttcc aaagcaaggc gcgcggtgtg ctgacctttc acatcgcaca aatcaggttg
    13861 tccgccatgt tcaaacggca tctgaggaac ttggcattcg gtttgcgcca aaggttcgat
    13921 gccgttcaaa tgggcggcga cttcgcccaa agagcgcgcg ccgtaaacgg taatgccgcg
    13981 catcacggcg gcttgtcctg cgttttcttc aggcaaaaca aatgcacgtt ttgcctgcat
    14041 accctgccac gccatcgcca acgcgccgcg cacggggcgc aacagccccg acagtgccaa
    14101 ttcccccgca aactcgtatt ccgccagttt ttcgggcgca acctgccccg atgcggcaag
    14161 gatgccgatt gcaatcggca aatcgaaacg ccccgactct ttgggcaggt cggcgggggc
    14221 gaggttgacg gtaatttttt tggcggggaa ttcaaaaccg ctttgaataa tggcggcacg
    14281 gacgcggtcg cgactttcct ttacttccgt atcgggcagc ccgacgatgt tgaaatgcgg
    14341 caggccgttg gcaaggtggg cttccacttc gaccaacggc gcattcatac cgctcaaagc
    14401 gcggctgtaa accaaggcaa gcgacatatt tcagacggcc ttattcgccg gcttcggttt
    14461 gctgcctgat ttcggcgacg gcttcttcgg cagcggcttc agccgcttcc aatgctgccc
    14521 gttcgggatt ttgcgcggct tcgagttttg ccaaacgcgc ttccaaagcc gccagtttgg
    14581 tacgggtttt gattaaaacc tgctgctgga tgtcgaattc ttcgcgcgta accagatcca
    14641 tacggttgaa cgcgccgccc agcatcgcct taatattttt ttccacatct ttggcagggc
    14701 tgttggcgat ggtttcgctg attttcgaac cgacttcttc aaaaagctgc ttgccgaaca
    14761 taatctgtat ccttcctgaa catatcaaat tcaatcggct attgtataag gaaaaatgcc
    14821 gtctgaaaac gggcggcgga taatcggcaa aacataccgc gcctcctttg cggttgctaa
    14881 attacacctc aaaacacctg ccgcctgaaa acggatttca tattccgcgc aacgccagat
    14941 tacaagacat tacaaaacaa tatactgttt taaatgattt ttccgacgcg catcgtttca
    15001 aactcggctt tttaagccat taagtgcttt gcaaacaaca gaaattgggt tatgctgaaa
    15061 cggattattt acaatttcat atagttttat tacatatctt attgtgattg aagataattt
    15121 atccgaatcc ccctttcggg tatctggatt ttccgttgta cttttattag aaaaacattt
    15181 caggcgcaag ttgcttgcaa tttcaaagcc tgtaattctg aagttttaga cgaggaatag
    15241 cacatgaatc ccatgtacat tacttttgca atctatctgg ttgcagtcct tctcatcggg
    15301 cttgccgcct atttttctac gcgcaatttc gacgattata ttttgggcgg gcgcagccta
    15361 ggcccgtttg ttaccgcgat gtcggcaggc gcgtccgata tgtccggctg gctgctgatg
    15421 ggtctgccgg gcgcgattta cctgagcggt ttgaatgagg cttggattgc catcggcctc
    15481 ttggtcggcg cgtatttcaa ctggctcttg gtggcgggcc gcctgcgcgt gcataccgaa
    15541 tacgccaaca atgcgctgac gctgccggat tatttcttcc accgcttcgg cgcgggcgga
    15601 cacttgatga aagtggtttc cgcactgatt atcctgttct tcttcacgat ttattgcgcc
    15661 tcgggcattg tggcgggcgc aaccctgttc caaagcctgt ttgaaggtat gacttacaat
    15721 caggcaatgt ggctgggcgc gggcgcgacc atcgcctata ccttcttggg cggcttcttg
    15781 gcggtcagct ggacggatac gttgcaggct tctttgatga ttttcgcgct gattttaacg
    15841 ccggtaatgg tctatctggg cttgggcggc gcggaacaga tgtctgccgc gattcaaagc
    15901 gtcgccgcag gcacgggcaa agaatacggc agcctgtttg ccggtacgac cgtcatcggc
    15961 atcatttcca ccgccgcatg gggcttgggc tatttcggac agccgcacat tttggcgcgc
    16021 tttatggcgg ccgaaagcgc gaaatcgctg gtatccgcac gccgcatcgg catgacttgg
    16081 atggcgttgt gccttgcggg cgcggtggcg gtcggttatt tcggcattgc gtatttcggt
    16141 gcaaatcccg acaaagtttc ttctatgagc ggcaaccacg aacgcatctt catcgcgctt
    16201 tccaccctgc tgttcaaccc ttggatcgcc ggcattattt tgagcgcgat tttggcggcg
    16261 gtgatgtcca ccctgtcctg ccagcttttg gtttgctcca gcgcgattac cgaagacttc
    16321 tacaaaggct ttttgcgtaa aaacgcgcaa cagtcggaat tggtatgggt cggccgcctg
    16381 atggtcttgg cgattgccgt gatttccatc ctgattgctt ccgatccgaa cagcaaagta
    16441 ttgggactgg tgtcttatgc gtgggcaggt ttcggtgcgg cgttcggccc gattgtgatt
    16501 ctgtccgtat tgtggaaacg catcactgcc tacggcgcgt tgtcgggtat ggttgcaggt
    16561 gccttaaccg tagtcgtatg ggcggaatgg ataaaaaaac cggctcaagc agcaggcgaa
    16621 agcggcttgt tgacgatgta cgaaatcgtc ccgggcttta ttgtttgctt aatcattgcc
    16681 gtgttggttt ccctgttcaa caaagaacct tcgcgcgaaa tccaaaaacg ctttgaaaaa
    16741 gccgactcag attaccgcgc cgcccgataa acccctttca gacggcacgg catcccggtt
    16801 cgtgccgtct gaacccgttt ccgggtcaaa cacaaataaa ccttgcctgc atacaggcct
    16861 tatttgtgtt ttacccgttt cattttcaaa gaaacggaag cacctaccct gcccgcattt
    16921 gaagccttgt atttcatctg cggatttatt acgatattac cgtattcagg ccgcaccgat
    16981 gccgcctgcc ccccgaaaaa ctttggagaa tccaaaaaat gtttcatttt gcatttccgg
    17041 cacaaactgc cctgcgccaa gcgataaccg atgcctaccg ccgtaatgaa atcgaagccg
    17101 tacaggatat gttgcaacgt gcacagatga gcgacgaaga gcgcaacgcc gcctccgagc
    17161 ttgcccgccg tttggttacc caagtccgcg ccggccgcac caaagccggc ggcgtagatg
    17221 cgctgatgca cgagttttca ctctccagcg aagaaggcat cgcgctgatg tgtctggcag
    17281 aagccctgct gcgtatcccc gacaacgcca cgcgcgaccg cctgattgcc gacaagattt
    17341 cagacggcaa ctggaaaagc catttgaaca acagcccttc cctcttcgtc aacgccgccg
    17401 cctggggcct gctgattacc ggcaaactga ccgccacaaa cgacagacaa atgagttccg
    17461 cactcagccg cctgatcagc aaaggcggcg caccgctcat ccgccaaggc gtaaattacg
    17521 ccatgcgcct gttgggcaaa cagttcgtca ccggacagac cattgaagaa gccctgcaaa
    17581 acggcaaaga acgcgaaaaa atgggctacc gcttctcctt cgatatgttg ggcgaagccg
    17641 cctacaccca agccgatgcc gaccgctact accgcgacta tgtcgaagcc atccacgcca
    17701 tcggcaaaga tgcggcagga caaggcgttt acgaaggcaa cggcatttcc gtcaaacttt
    17761 ccgccatcca tccgcgctac tcgcgcgccc aacacggccg tgtgatgggc gaactgttgc
    17821 cgcgcctgaa agagctgttc cttttgggta aaaaatacga tatcggtatc aacatcgatg
    17881 ccgaagaagc caaccgtctg gagctgtctt tggatttgat ggaggctttg gtttcagacc
    17941 ctgacttggc tggctacaaa ggtatcggtt tcgttgtcca agcctaccaa aaacgttgtc
    18001 cgttcgttat cgactacctg atcgaccttg cccgccgcaa caaccaaaaa ctaatgatcc
    18061 gcctcgtcaa aggcgcgtat tgggacagcg aaatcaaatg ggcgcaagtg gacggcttga
    18121 acggctatcc gacctacacc cgcaaagtcc acaccgacat ctcctacctc gcctgcgcgc
    18181 gcaaactgct ttccgcgcaa gacgcggtat tcccgcaatt tgccacccac aacgcctaca
    18241 ctttgggcgc aatctaccaa atgggtaaag gcaaagattt tgaacaccaa tgcctgcacg
    18301 gtatgggcga aaccctgtac gaccaagtcg tcggcccgca aaacttaggc cgccgcgtgc
    18361 gcgtgtacgc cccggtcggc acacacgaaa ccctgctcgc ctacttggtg cgccgcctgt
    18421 tggaaaacgg cgcgaactcg tctttcgtca accaaatcgt cgatgaaaac atcagcatcg
    18481 acacgctcat ccgcagcccg ttcgacacca tcgccgaaca aggcatccac ctgcacaacg
    18541 ccctgccgct gccgcgcgat ttgtacggca aatgccgtct gaactcgcaa ggcgtggact
    18601 tgagcaacga aaacgtattg cagcagcttc aagaacagat gaacaaagcc gccgcgcaag
    18661 acttccacgc cgcatccatc gtcaacggca aagcccgcga tgtcggcgaa gcgcaaccga
    18721 ttaaaaaccc tgccgaccac gacgacatcg tcggcacagt cagctttgcc gatgccgcgc
    18781 ttgcccaaaa agcggttggc gcagccgttg ccgcgttccc cgaatggagt gcgacacctg
    18841 ccgccgaacg cgccgcctgc ctgcgccgtt tcgccgacct gctcgaacag cacacccccg
    18901 cgctgatgat gcttgccgtg cgcgaagcag gcaaaacgct gaacaacgcc attgccgaag
    18961 tgcgcgaagc cgtcgatttc tgccgctact acgcaaacga agccgaacat accctgcctc
    19021 aagacgcaaa agccgtcggc gcgattgtcg ccatcagccc gtggaacttc ccgctcgcca
    19081 tctttaccgg cgaagtcgtt tccgcattgg cggcaggcaa caccgtcatc gccaaacccg
    19141 ccgaacaaac cagcctgatt gccggttatg ccgtttccct catgcacgaa gccggcatcc
    19201 cgacttccgc cctgcaactc gtcctcggcg caggcgacgt gggtgcggca ttgaccaacg
    19261 atgcccgcat cggcggcgtg attttcaccg gctcgaccga agtggcgcgc ctgatcaaca
    19321 aagcccttgc caaacgcggc gacaatcccg tcctgattgc cgaaaccggc ggacaaaacg
    19381 ccatgattgt cgattccacc gcacttgccg aacaagtctg cgccgacgta ttgaactccg
    19441 ccttcgacag cgcgggacaa cgctgctccg ccctgcgtat cttgtgcgtc caagaagacg
    19501 ttgccgaccg tatgctcgac atgatcaaag gcgcgatgga cgaactcgtc gtcggcaaac
    19561 cgattcagct cactaccgat gtcggccccg tcatcgatgc cgaagcacag caaaacctgt
    19621 tgaaccacat caacaaaatg aaaggcgttg ccaagtctta ccacgaagtc aaaaccgctg
    19681 ccgatgtcga ttccgaaaaa tccacgttcg tccgccccat cctgtttgaa ttgaacaacc
    19741 tcaacgaact gcaacgcgaa gtcttcggtc ccgtcctgca cgtcgtccgc taccgcgccg
    19801 acaaactcga cagcgtcatc gaccaaatca acagcaaagg ctacgccctg acccacggcg
    19861 tacacagccg catcgaaggc acagtacgcc acatccgcag ccgcatcgaa gccggcaacg
    19921 tttacgtcaa ccgcaacatc gtcggcgcag tcgtcggcgt acagcccttc ggcggacacg
    19981 gtctgtccgg cacaggcccc aaagcaggcg gttcgttcta cctgcaaaaa ctgacccgca
    20041 tccccgaatg ggttgccccg accctgagcc aaatcggaca ggcagacgaa gccgcgctca
    20101 aacgcctcga agcactggtt cacaaactgc cgttcaacgc cgaagagaaa aaagccgcag
    20161 cggccgcttt gggacacgcc cgcatccgca ccctgcgccg tgccgaaacc gtccttaccg
    20221 gcccgaccgg cgagcgcaac agcatctcat ggcacgcgcc aaaacgcgtc tgggtacacg
    20281 gcggcagcct cctgcaagcc ttctgcgccc taaccgaact tgccgcctcc ggcgtacagg
    20341 cagtggtcga acccgacagc ccgctggctt cctacaccgc cgacttggaa ggtctgctgc
    20401 tggtcaacgg caaacccgaa accgccgaca tcagccacgt tgccgccctg tcgcctttgg
    20461 acagcgcgcg caaacaggaa cttgccgccc acgacggcgc actcatccgc atcctccctt
    20521 cggaaaacgg actcgacatc ctgcaagtgt ttgaagaaat ctcttgcagc gtcaacacca
    20581 cagccgtcgg cggcaacgcc agcctgatgg cggttgccga ctgattttac cgaaatcccc
    20641 gagcgcggcc cgtgaaccaa tgccgtctga aaacctttca gacggca
//
LOCUS       DAWKJW010000017        20202 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.017, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000017 DAWKJW010000000
VERSION     DAWKJW010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20202)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20202)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20202
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.017"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(512..1654)
                     /locus_tag="WJJ54_000498"
     CDS             complement(512..1654)
                     /locus_tag="WJJ54_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ7341398.1"
                     /translation="MKKSVLAVLAALSLAACGGSEKNAVQPQADAASAANAEAAATDT
                     LNIYNWSNYVDESTVEDFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFL
                     PRQIEAGAYQKVNKDLIPNYKNIDPELLKMLETADPGNQYAVPYFSGVNTIAITAKGK
                     ELLGGKLPENGWDLLFKPEYTHKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDL
                     KAAAEVLKSIRPDVKRFSPSIIDELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEV
                     LNPKGMGFWIESWLIPADAKNVANAHKYINYTLDPEIAAKNGIAVTFAPASKPAREKM
                     PAELVNTRSIFPNEQDMKDGFVMPQMSTDAKKLSVSLWQKIKVGTN"
     gene            1958..2221
                     /gene="rpsT"
                     /locus_tag="WJJ54_000499"
     CDS             1958..2221
                     /gene="rpsT"
                     /locus_tag="WJJ54_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEZ7341399.1"
                     /translation="MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDK
                     AAAQAVYQESVKVIDRIADKGVFHKNKAARHKSRLSAKVKALA"
     gene            2381..3529
                     /locus_tag="WJJ54_000500"
     CDS             2381..3529
                     /locus_tag="WJJ54_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HEZ7341400.1"
                     /translation="MPTMGAEMNTRNMRYILLTGLLPTVSAFGETALQCAALTDNVTR
                     LACYDRIFAAQLPSSAGQEGQESKAVLNLTETVRSSLDKGEAVIVVEKGGDALPADSA
                     GETADIYTPLSLMYDLDKNDLRGLLGVREHNPMYLMPLWYNNSPNYAPGSPTRGTTVQ
                     EKFGQQKRAETKLQVSFKSKIAEDLFKTRADLWFGYTQRSDWQIYNQGRKSAPFRNTD
                     YKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNGQSRPESRSWNRIYAMAGMEWGKLT
                     VIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYRLNDRQNVYSVLRYNPKTGYGAI
                     EAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGIGLMFNDLDGI"
     gene            3672..4373
                     /locus_tag="WJJ54_000501"
     CDS             3672..4373
                     /locus_tag="WJJ54_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HEZ7341401.1"
                     /translation="MTEPEAEGGKAAKALKKYLITGILVWLPIAVTVWVVSYIVSASD
                     QLVNLLPKQWRPQYVLGFNIPGLGVIVAIAVLFVTGLFAANVLGRQILAAWDSLLGRI
                     PVVKSIYSSVKKVSESLLSDSSRSFKTPVLVPFPQSGIWTIAFVSGQVSNAVKAALPK
                     DGDYLSVYVPTTPNPTGGYYIMVKKSDVRELDMSVDEALKYVISLGMVIPDDLPVKTL
                     AGPMPSEKADLPEQQ"
     gene            4431..6239
                     /gene="aspS"
                     /locus_tag="WJJ54_000502"
     CDS             4431..6239
                     /gene="aspS"
                     /locus_tag="WJJ54_000502"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEZ7341402.1"
                     /translation="MRTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGI
                     VQVVIDPDTPEAFAAADSARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVL
                     NAAATPPFQIDDENISENVRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFID
                     IETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDLETSFLNEDEIMDITEGMAKQVFKDALGVDLGDFPRMPYSEA
                     MFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKE
                     IDEYTKFVGIYGAKGLAYIKVNDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQ
                     NGDIIFFGADKTKVVNEAIGALRIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEA
                     DRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKV
                     FAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFPKT
                     QRAQCLLTNAPNSVDDKQLRELSLRLRQKAAETKEA"
     gene            6390..6674
                     /locus_tag="WJJ54_000503"
     CDS             6390..6674
                     /locus_tag="WJJ54_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ7341403.1"
                     /translation="MKKLLLAAVVSLSAATAFAGDSAERQIYGDPHFEQNRTKAVKML
                     EQRGYQVHDVDADDHWGKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDR"
     gene            6841..8733
                     /gene="speA"
                     /locus_tag="WJJ54_000504"
     CDS             6841..8733
                     /gene="speA"
                     /locus_tag="WJJ54_000504"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HEZ7341404.1"
                     /translation="MPILTIREVCNINHWGIGYYDVDDFGEIIVRPNPSQHNQTVSLQ
                     KLTEAVQQKHQARLPVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQ
                     HRRVIESLMSSGQPHGLEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEK
                     LGHQVYLVIEKLSEIQMVLEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLS
                     ASQVLQLVDILKQKNRLDCLQLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNI
                     RCFDVGGGLGVDYEGNRTQSDCSVNYSLNEYAATVVWGISQACLEHGLPHPTIITESG
                     RGITAHHAVLVANVIGVERYKPRRLDAPSPEAPRVLHSMWETWTDISASREKRSLRSW
                     IHEGQFDLADVHNQYNVGLLSLAQRAWAEQLYLNICHEVGELFNEKHRSHRTIIDELQ
                     ERFADKLYVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDH
                     YIDGDGIAGTMPMPDYPEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVVVGEDGQ
                     FTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIEHSDLPASQAMSFLKELEAGLNGY
                     TYLEDE"
     gene            8832..9755
                     /gene="speB"
                     /locus_tag="WJJ54_000505"
     CDS             8832..9755
                     /gene="speB"
                     /locus_tag="WJJ54_000505"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HEZ7341405.1"
                     /translation="MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESHADWVITGVPY
                     DMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRD
                     FVEKMEAHAGKLLSSGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNG
                     SEYDHGTMFYTAPKEGLIDPSRSVQIGIRTEHSKKLPFTVLTAPQVNEDSVEETVRKI
                     KETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVE
                     VAPSYDQSDITALAGATIALEMLYLQGAKKD"
     gene            9953..11419
                     /locus_tag="WJJ54_000506"
     CDS             9953..11419
                     /locus_tag="WJJ54_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HEZ7341406.1"
                     /translation="MMKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFVGV
                     IAAIIGKAMPLGALSIIAVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMIS
                     RGLLKTGLGMRIGYLFIAVFGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQ
                     SIAGSYGSNPAKGTEGKMGKYLALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSS
                     FRLSWGVWAWAMAVPGVIAFFVMPLILYFLYPPEIKETPNAVQFAKDRLREMGKMSAD
                     EIIMAVIFGILLLLWADVPALITGNHAFSINATATAFIGLSLLLLSGVLTWDDVLKEK
                     SAWDTIIWFGALIMMAAFLNKLGLIKWFSGVLAESVGGLGVSGTAAGVILVLAYMYAH
                     YMFASTTAHITAMFGAFLAAAVSLNAPAMPTALMMAAASNIMMTLTHYATGTSPVIFG
                     SGYTTMGEWWKAGFIMSVVNFLIFFVIGSIWWKVLGYW"
     gene            complement(11626..12702)
                     /locus_tag="WJJ54_000507"
     CDS             complement(11626..12702)
                     /locus_tag="WJJ54_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEZ7341407.1"
                     /translation="MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVA
                     QGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKS
                     IQKERGDGVKIIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKS
                     PDALEFAKTIASGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDIASLKKSIAQ
                     WAKTQGKTIAPEKVDAVLKDRTGSAVCLTCGKNGKMKMPLKSLAWIQGSSSYRQAEVI
                     EQTEETNSAEISETRTPEVPDVHTPEAQPHLNTQSDGTPTAYTEPAADSSPQVETPDQ
                     AASEPVDVLFSIDVIRQGNLRLGN"
     gene            12925..14067
                     /gene="bioF"
                     /locus_tag="WJJ54_000508"
     CDS             12925..14067
                     /gene="bioF"
                     /locus_tag="WJJ54_000508"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HEZ7341408.1"
                     /translation="MKVFKQQLEQLGAQNQYRSIPDLIHQGRYITRENCKMLNMSSND
                     YLGLASDENLRRSFLQQYGGNFPSFTSSSSRLLTGNFPIYTDLEELVAQRFQRESALL
                     FNSGYHANIGILPALTTTKSLILADKFVHASMIDGIRLSRCAFFRYRHNDYEHLKNLL
                     EKNVGKFDRTFIVTESVFSMDGDVADLKQLVQLKKQFPNTYLYVDEAHAIGVYGQNGL
                     GIAERDNLIAEIDLLVGTFGKALASVGAYAVCNQVLKECLINQMRPLIFSTALPPFNV
                     AWTYFIFERLPQFSKERSHLEQLSAFLRREVAHRTQIMPSQTCIVPYILGGNEAALAK
                     AEYLQRQGYYCLPIRPPTVPKNTSRIRLSLTADMTTDEVRQFAVCL"
     gene            14077..14724
                     /locus_tag="WJJ54_000509"
     CDS             14077..14724
                     /locus_tag="WJJ54_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HEZ7341409.1"
                     /translation="MKTKFYNHQGGHLILYFAGWGMPPDAVNHLILPENHDLLICYDY
                     QDLNLDFDFSAYRHIRLVAWSMGVWAAERALQGIRLKSATAVNGTGLPCDDNFGIPCT
                     VFKGTLENLTENTRLKFERRMCGDKASFEDYQQFPARPFGEIHQELIALFAMIGQDRR
                     TDLIRWTNALVGSGDKIFMPANQHRYWTPRCTVREIDVGHYLFSRFTHWSALWNH"
     gene            14712..15494
                     /gene="bioC"
                     /locus_tag="WJJ54_000510"
     CDS             14712..15494
                     /gene="bioC"
                     /locus_tag="WJJ54_000510"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HEZ7341410.1"
                     /translation="MESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMTHLQDY
                     LPDMPLENVLELGCGSGMLSALLQKQISANYWLFNDLCNVQPQLAEKLPQSFDFYCGD
                     AENFPFQRQFDLIASASAVQWFHQPDAFITHCKTGLKTNGLLAVATFGKDNLKEVRQI
                     TNIGLNYPTLSQWQAWLAKDFELLWCEDFTVILDFDTPSDVLKHLKYTGVTATNQKNW
                     TRKNLNGFIGDYLSAFGMPSGKVRLTYHPLFFIARYSAAGRQ"
     gene            15714..17150
                     /locus_tag="WJJ54_000511"
     CDS             15714..17150
                     /locus_tag="WJJ54_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEZ7341411.1"
                     /translation="MENSLIIGLALAVLLMLLVMRAKQGKKTPKRKSQGVGNTQGQTP
                     GSNDSDWVDQIGQSVSDGTQPDWSWNESAETASAAVSAQEVDPLTEYQVYKQFGYQGK
                     AAESLAAYLDGIPDGEAKPENLIRELLDINLEVGDVDVLADNLQKYGKLIPSELLAKY
                     IEQALQRDSNHLRIRVLAEEGLGWGTQEIEKRAEGGSATAASASPPPDAGGKAYEAEE
                     IKRIPIVRGKKDVSRISQEEIGAIAGLVRADQGAKILKDKVSYETASKQYDRAIQTSE
                     KPANLIIDALKLDYQYADIDRFAGHLWKLYQTLGNYGRQVKERMLGWGYSLGYHEVFD
                     DLEKGPNDRQIKDIGMGHGYLPKNIQKFKSQHRDLVLQDSSLINTGSSPADDAVKEVE
                     SLLMYGQIEAAMDVLEQAVLKYPDESQLYITLIDIYERTEDWDRLGQFLRVLRERADR
                     LPEEVVMLMSRLLQRMNQNIKKIKRYGK"
     gene            17153..18250
                     /locus_tag="WJJ54_000512"
     CDS             17153..18250
                     /locus_tag="WJJ54_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEZ7341412.1"
                     /translation="MEVQLPKIKTVRVMLAGMTAQQESVFKMAFKMHNTTRYETVSPS
                     DGSAVPDLVLADTDAEGGFELWKELAERYKDIPVAVCSEKVPDSEVPYLPKPIRFETL
                     FPMLRKLLQGENVYGKSFIAPADRSAKNNGNVQRTVTIRQFNPNKGLLGALRFAEKNR
                     QDIAILHGNKPVLIVFPSIQRVLLTESVQKLEELCKDENLQVSCKTVPDNPQWREKAK
                     VGIMSCMWQFSIWTAQGRLIYPISPDTPFTLKSWPNLTRLANVPGSIRLSAFLTKASV
                     NLNVLYKVMPLNLNDILNYLAATYTTGFLSVDLKTVSQQAYSDMADKINIGADSASDS
                     EMMKKAEKITTSSQSQSRGLLQRLMKKLLGS"
     gene            18262..18798
                     /locus_tag="WJJ54_000513"
     CDS             18262..18798
                     /locus_tag="WJJ54_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HEZ7341413.1"
                     /translation="MRENKIIFTGPVGVGKTTAIAAISDEALVQTDASASDMTLDRKR
                     NTTVAMDYGAISLDEDTKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNARTNPLKD
                     LEFFLHSFRGLLEKAPVVVGITKMDIRSQPGIDVYHKYLAKHNLNVPVFEIDARKEDD
                     VKQLVSAMLFSIDPGLEV"
     gene            18800..19444
                     /locus_tag="WJJ54_000514"
     CDS             18800..19444
                     /locus_tag="WJJ54_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
                     /protein_id="HEZ7341414.1"
                     /translation="MESTLSLQANLYPRLTPAGAFYAVSSDAPSAGKTLLHSLLKADA
                     DEMVSSEKLLTWADTADIDTALNLLYRLQKLEFLYGDENGHSDGINLSDEQLPLLMEQ
                     LSGSGKALLVDRNGLYLANANFHHEAAEELGLLAAEVAQMEKKYRLLIKNNLYINNNA
                     WGVCDPSGQSELTFFPLYIGSTKFILVIGGIPDLGKEAFVTLVRILYRRYSNRV"
     gene            19467..19826
                     /locus_tag="WJJ54_000515"
     CDS             19467..19826
                     /locus_tag="WJJ54_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HEZ7341415.1"
                     /translation="MQQLLISILEDLNNTSTDIIASAVISTDGLPMATMLPSHLNSDR
                     VGAISATLLALGSRSVQELACGELEQVMIKGKSGYILLSQAGKDAVLVLVAKETGRLG
                     LILLDAKRAARHIAEAI"
     gene            19919..19994
                     /locus_tag="WJJ54_000516"
     tRNA            19919..19994
                     /locus_tag="WJJ54_000516"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19952..19954,aa:Asn,seq:gtt)
BASE COUNT         5121 a         4684 c         5195 g         5202 t
ORIGIN      
        1 ggatttgagg tttctgtttt tgattttctg ttttcgtggg aatgacggtt tagaagttac
       61 ccgaaacctc aaaaaaaccg aaaccgaacg gatcggatta ccgctttcgc gtttcaaagt
      121 tacggcgtta tcggaaaaac agaaaatcaa agctgcaaga atttatttaa aacaaccgaa
      181 tttcaacgga tcggattctc gcctgtaggg aatgacggcg gaaggttttt tgtcttttct
      241 gacagatgtc cgcaatctga aatcccgacc gtgggaacga cggtatagtg gattaacaaa
      301 aaccagtacg gcgttgcctc gctttagctc aaagagaacg attctctaag gtgctgaagc
      361 accaagtgaa tcggtttcgt actatttgta ctgtctgcgg ctttgtcgcc ttgtcctgat
      421 ttttgttaat ccactatata aatatttcta tttcaatcca atataaaatg ccgtccgaac
      481 gatgttcgga cggcattttt aatgcttcaa atcagttggt gccgactttg attttctgcc
      541 acaggctgac agacagtttt ttcgcatccg tactcatttg cggcatcaca aaaccgtctt
      601 tcatatcctg ctcgttcggg aagatggaac gggtgtttac cagttcggca ggcatttttt
      661 cgcgcgccgg tttgctggcg ggggcgaagg ttacggcgat gccgtttttc gccgcgattt
      721 cggggtcgag cgtgtagttg atgtatttgt gggcattggc gacgtttttc gcatcggccg
      781 gaatcagcca agattcaatc cagaagccca tgcctttcgg attcaacact tcgatgccga
      841 cgttgttttt cacttcttcg gaacgtgctt tcgccaagtt caaatcgccg ccgttgcctg
      901 ccgccaggca gatgtcgccg cgcgccagct cgtcgatgat ggacgggctg aaacgtttga
      961 catccggacg gatagacttc aacacttccg ccgccgcctt caaatcttca ggattcgagc
     1021 ctttggggtc tttgcccaag tagttcagca aaatcgggaa catttcgctc ggggtgtccc
     1081 acagggcgat gccgcaggat ttcagcttgt gggtgtattc gggtttgaac agcaaatccc
     1141 agccgttttc gggcagcttg ccgcccaaaa gctctttgcc tttcgccgta atcgcaatcg
     1201 tgttcacgcc ggagaaatag gggacggcat actggttgcc cgggtcggcg gtttccagca
     1261 ttttcaagag ttcgggatcg atgtttttat agttgggaat caggtctttg ttgacttttt
     1321 gatacgcgcc cgcctcgatt tggcgcggta ggaaggcgat gcccggcaca accaaatcgt
     1381 aaccggattt gccggtcagc attttggctt ccagcgtttc attgttttcg tacaagtcgt
     1441 aagtcagctt cagattattg gcttttttaa agtcttcgac cgtactctcg tcaacatagt
     1501 tcgaccagtt gtagatgttc agagtatcgg tggcagcggc ttcggcattg gcagcagacg
     1561 cagcgtctgc ttgaggttgc acggcgtttt tttcgctgcc gccgcaggct gccaaagaca
     1621 gcgcggccaa aacggctaat acggattttt tcatacgggc agattcctga tgaaagaggt
     1681 tggaaaaaaa agaaaacccc gcgccccata aacaccccgg cgcaaggttt gggcattgta
     1741 aagtaaattt gtgcaaactc aaagcgatat tgacctgatt ttcctaaaaa attaccttgt
     1801 tttcaaaaga gggagaaaac gtccgcacga ttttgccgtt tttttgcgct gtcagggtgt
     1861 ccgacgggcg gatagagaga aaaggcttgc atataatgta aacccccttt aaaattgcgc
     1921 gtttacagaa tttatttttc tttcaggaga ttccaatatg gcaaacagcg cacaagcacg
     1981 caaacgtgcc cgccagtccg tcaaacaacg cgcccacaac gctagcctgc gtaccgcatt
     2041 ccgcactgca gtgaaaaaag tattgaaagc agtcgaagca ggcgataaag ctgccgcaca
     2101 agcggtttac caagagtccg tcaaagtcat cgaccgcatc gccgacaagg gcgtgttcca
     2161 caaaaacaaa gcggcacgcc acaaaagccg tctgtctgca aaagtaaaag cactggcttg
     2221 atttttgcaa aaccgccaag gcggttgata cgcgataagc ggaaaaccct gaagcccgac
     2281 ggtttcgggg ttttctgtat tgcgggggca aaatcccgaa atggcggaaa gggtgcggtt
     2341 tttatccgaa tccgctataa aatgccgttt gaaaaccaat atgccgacaa tgggggcgga
     2401 gatgaataca cggaatatgc gctatattct tttgacagga ctgttgccga cggtatccgc
     2461 ttttggagag accgcgctgc aatgcgccgc tttgacggac aatgttacgc gtttggcgtg
     2521 ttacgacagg atttttgcgg cacagcttcc gtcttcggca gggcaggaag ggcaggagtc
     2581 gaaagccgta ctcaatctga cggaaaccgt ccgcagcagc ctggataagg gcgaggcggt
     2641 cattgttgtt gaaaaaggcg gggatgcgct tcctgccgac agtgcgggcg aaaccgccga
     2701 catctatacg cctttgagcc tgatgtacga cttggacaaa aacgatttgc gcgggctgtt
     2761 gggcgtacgc gaacacaatc cgatgtacct tatgccgctc tggtacaaca attcgcccaa
     2821 ctatgccccg ggttcgccga cgcgcggtac gactgtacag gaaaaattcg gacagcagaa
     2881 acgtgcggaa accaaattgc aggtttcgtt caaaagcaaa attgccgaag atttgtttaa
     2941 aacccgcgcg gatctgtggt tcggctacac ccaaagatcc gattggcaga tttacaacca
     3001 aggcaggaaa tccgcgccgt tccgcaatac ggattacaaa cctgaaattt tcctgaccca
     3061 gcctgtgaag gcggatttgc cgttcggcgg caggctgcgt atgctcggtg cgggttttgt
     3121 ccaccagtcc aacggacaga gccgtcccga atcgcgttcg tggaacagga tttacgccat
     3181 ggcaggcatg gaatggggca aattgacggt gattccgcgc gtgtgggtgc gtgcgttcga
     3241 tcagagcggc gataaaaacg acaatcccga tattgccgac tatatggggt atggcgacgt
     3301 gaagctgcag taccgcctga acgacaggca gaatgtgtat tccgtattgc gctacaaccc
     3361 caaaacgggc tacggcgcga ttgaagccgc ctacacgttt ccgattaagg gcaaactcaa
     3421 aggcgtggta cgcggattcc acggttacgg cgagagcctg atcgactaca accacaagca
     3481 gaacggtatc ggtatcgggt tgatgttcaa cgacttggac ggcatctgaa ccgcgtgttc
     3541 agacggtata tcaagttgcc gtgccgtctg aagccgctgg cggtttggcg gggcgggata
     3601 aaaatttcgt ttgaatccgg gcaaacgcgt ataatgtgcg gtttgtacgg actttgtcgg
     3661 aatcaagcaa gatgacggaa cctgaggccg aaggcggtaa agctgccaag gcgttaaaaa
     3721 aatatctgat tacgggcatt ttggtctggc tgccgattgc ggtaacggtt tgggtggttt
     3781 cctatatcgt ttccgcgtcc gatcagctcg tcaacctgct gccgaagcaa tggcggccgc
     3841 aatatgtttt gggcttcaat atcccggggc tgggcgttat cgttgccatt gctgtattgt
     3901 ttgtaaccgg attgtttgcc gcaaacgtat tgggccggca gattcttgcc gcgtgggaca
     3961 gcctgttggg gcggattcca gttgtgaagt ccatctattc gagtgtgaaa aaagtatccg
     4021 aatcgctgct gtccgacagc agccgttcgt ttaaaacacc agtactcgtg ccgtttcccc
     4081 aatcgggtat ttggacaatc gcattcgtgt ccggtcaggt gtcgaatgcg gttaaggccg
     4141 cattgccgaa ggacggcgat tatctttccg tgtatgttcc gaccacgccg aatccgaccg
     4201 gcggttacta tattatggta aagaaaagcg atgtgcgcga actcgatatg agcgtggacg
     4261 aagcattgaa atatgtgatt tcgctgggta tggtcatccc tgacgacctg cccgtcaaaa
     4321 cattggcagg acctatgccg tctgaaaagg cggatttgcc cgaacaacaa taaagccgcc
     4381 gttcagacgg cattttctgt tttcagttta aatcaataaa aggtgaattt atgcgtacca
     4441 actattgcgg cctgatcagc gagcaatact tagaccaaac cgtaaccgtc aaaggctggg
     4501 tacaccgccg acgcgaccac ggcggtgtga tttttatcga cctgcgcgac cgcgaaggca
     4561 tcgtccaagt cgtgattgac cccgacactc cggaagcgtt tgctgctgcc gattccgccc
     4621 gcaacgaata cgttttgagc attaccggcc gcgtacgcaa ccgtcccgaa ggtacaacca
     4681 acgacaaaat gatttccggc aaaatcgaaa ttcttgccaa agaaatcgaa gtattaaacg
     4741 ccgccgctac gcctccgttc caaatcgacg atgaaaacat cagcgaaaac gttcgcctga
     4801 ccaaccgcgt tatcgacctg cgccgtccgg tgatgcagcg caacctgcgc ctgcgttacc
     4861 aagtggctat gggcgttcgc cgctacttgg acgcgcaagg tttcatcgac attgaaaccc
     4921 cgatgctgac ccgctccacg cctgaaggcg cgcgcgacta cctcgtgccg agccgcgttc
     4981 atccgggcga gtttttcgcg ctaccgcaat cgccgcaatt attcaaacaa ctgttgatgg
     5041 tggcgggttt cgaccgttac taccaaatca ccaagtgctt ccgcgacgaa gacctgcgtg
     5101 ccgaccgtca gcctgaattt acccaaatcg acttggaaac ctcgttctta aacgaggatg
     5161 aaatcatgga catcaccgaa ggtatggcga aacaagtctt caaagacgcg ctgggcgtgg
     5221 acttgggcga cttcccacgc atgccttact ctgaagccat gttctactac ggctctgaca
     5281 aaccggacat gcgtatcaac ttgaaattca ccgagttgac cgacctgatg aaaacggaag
     5341 aattcaaagt cttccgtggc gcggcagata tgaaaggcgg ccgcgtagtc gctctgcgtg
     5401 taccgaacgg cgcgaaattc agccgcaaag aaatcgacga atacaccaaa tttgtcggca
     5461 tctacggtgc gaaaggtctg gcatacatca aagtaaatga tgtgggcaac ctctccaacg
     5521 gcgaagacag cggcctgcaa tctccaatcg taaaattcct gtctgagaat gccctgaagg
     5581 aaatcatcgc gcgtaccggc gcacaaaacg gcgatattat cttcttcggt gcagacaaaa
     5641 ccaaagtcgt aaacgaagcc atcggcgcat tgcgtatcaa agtcggcttg gaacacggcg
     5701 cggaaaacgg ctatttcaca gacgaatgga aacctttgtg ggttgtcgac ttcccaatgt
     5761 tcgaatacga cgaagaagcc gaccgctacg ttgccgtaca ccatccgttt actgcgccaa
     5821 aagaaggtca tgaagacctg atggtttccg acccggcaaa ttgtttggca cgcgcctacg
     5881 atatggtatt gaacggctgg gaaatcggcg gcggctctat ccgtatccac cgcgcagacg
     5941 tgcaagagaa agtgtttgcc gcgctgaaaa tcagccctga agagcaacaa gagaaattcg
     6001 gcttcctctt ggacaacctg aaattcggtg cgcctcctca cggcggcctt gcattcggcc
     6061 tcgaccgtct ggtaacgctg atgaccggag ccgaatccat ccgcgacgtg attgccttcc
     6121 cgaaaacaca acgtgctcaa tgcctgctga ccaacgcgcc caacagcgtg gacgacaagc
     6181 agttgcgcga attgagcttg cgcctgcgtc aaaaggcggc tgaaaccaaa gaagcataag
     6241 gaaaacagag ccatttgacg gctctgtttt tttcagacgg catttacgct tcttaacttc
     6301 cctctaattc aaacctaatt ttgctgtgtt ttaatggcag cattgaaaaa cacatcttat
     6361 tcaatcaacc gattaagaaa ggactgaaaa tgaaaaaact gttattggcc gccgttgttt
     6421 ccctgagtgc cgcaaccgca tttgccggcg attctgccga gcgtcagatt tacggcgatc
     6481 cccattttga acaaaaccgc acaaaagccg taaaaatgtt ggagcagcgc ggttatcagg
     6541 ttcacgatgt cgatgccgac gaccattggg gtaagcctgt gctggaagtg gaagcctata
     6601 aagacggccg cgaatacgac atcgtgttgt cttaccccga cctgaaaatc atcaaagagc
     6661 agctcgatcg ctgactcctt tgatggaaag atgaaccaaa atgccgtctg aagcgttcag
     6721 acggcatttt gcctgttcct catcaggtat gaggcaggct tttcttatta aaaaaatgac
     6781 atttcacgct gatttgttat aatcattcct tttcaacacg acagacggag caggtttatt
     6841 atgcctatcc ttaccatccg tgaagtgtgc aacattaatc attggggcat aggttattat
     6901 gatgttgacg atttcggcga aatcatcgtc cgccccaatc cctcgcaaca caatcaaact
     6961 gtttcactgc aaaaactgac tgaagccgtg caacaaaaac atcaggcgcg cctgcctgtt
     7021 ttgttttgtt ttccgcaaat cctcgaacac cgcctccgcg acattaaccg cgcctttcag
     7081 acggcacggg aagagtgcgg ctataagggc ggttattgtt tggtttaccc tatcaaggtc
     7141 aaccaacacc gccgcgtcat cgaatcgctt atgtcaagcg gacaaccgca tggtttggag
     7201 gccggttcta aagccgaact gatggcggtt ttggcacacg ccggcacccg gcaaacatta
     7261 atcgtctgca acggctataa agaccgtgaa tatatccgtt tcgccttgat gggcgaaaaa
     7321 ctggggcatc aggtttattt ggtgattgag aagctgtccg aaatacaaat ggtattggaa
     7381 gaggcggaaa aactcggcat caagccccgt ttgggtgtgc gcgccagact ggcttcccaa
     7441 ggttcgggaa aatggcagtc ttcgggtggg gaaaaatcaa aattcggctt gtcggcttcc
     7501 caagttttgc aactggtcga tattttgaaa caaaaaaaca ggctggattg cctgcagctt
     7561 ttgcatttcc atttgggctc gcagcttggg aacatccgtg atgttgccac aggtgtacac
     7621 gaatcggctc ggttttatgt tgagttgcac aaactggggg taaatatccg ctgttttgat
     7681 gtaggcggcg ggcttggcgt ggattacgaa ggaaaccgca cacaatcgga ttgttccgtt
     7741 aattacagcc tcaacgaata tgccgccaca gtcgtatggg gcatcagtca ggcttgtctc
     7801 gaacacgggc tgccgcatcc gacaatcatt accgagagcg ggcgcggcat taccgcacat
     7861 cacgccgttt tggttgccaa tgttataggc gttgaacgtt acaaaccgcg ccggctggat
     7921 gcgccatcgc ccgaagcacc gcgtgtgttg cacagtatgt gggaaacttg gacggatatt
     7981 tccgcctcgc gggaaaaacg ttccttacgc agctggatac acgaagggca gtttgatctt
     8041 gccgatgtgc ataatcagta taatgtcggg ctgttgagtt tggcgcaacg tgcgtgggcg
     8101 gagcaactgt atttaaatat ctgtcatgaa gtcggcgaat tgtttaatga aaaacaccgg
     8161 tctcaccgaa ccattattga cgaattgcaa gaacgttttg ccgataagct gtatgtcaat
     8221 ttctcactct tccaatcttt gcccgatgct tggggcatag atcaactttt ccctgtttgt
     8281 cccattaccg gtttgaatga accgattgcg cgccgcgccg tgttgttgga cattacctgc
     8341 gattcagacg gtacgattga ccactacatc gacggcgacg gcatcgccgg tacgatgcct
     8401 atgcctgatt atcccgaaga agagccgccg cttttaggct tttttatggt gggagcatat
     8461 caggaaatac tcggcaatat gcacaatctt ttcggcgaca ctgccactgc cgatgttgtt
     8521 gtaggggaag acggacaatt taccgtcatc gattacgatg aaggaaacac cgttgccgat
     8581 atgctcgaat acgtttatca agatccgaaa gagctgatga aacgctatcg cgaacaaatc
     8641 gaacattcag accttcctgc ctcgcaggct atgtctttct taaaagaact cgaagcgggg
     8701 cttaatggtt atacctattt ggaagacgaa tagacgcatc aaggcatcgg atatgtcgtc
     8761 tgaagcccga ttttcttact caaacaccaa tcatcacgac cgattgaaac caattacaag
     8821 gaatcattac gatgcaatac agcacactgg caggacaaac cgacaactcc ctcgtttcca
     8881 ataatttcgg gtttttgcgc ctgccgctta attttatgcc gtatgaaagt catgccgatt
     8941 gggttattac cggcgtgcct tatgatatgg cggtttcagg gcgttccggc gcgcgtttcg
     9001 gtcctgaagc catccggcgc gcctccgtca acctcgcttg ggagcaccgc aggtttccat
     9061 ggacatttga tgtgcgcgaa cgcctgaaca ttattgattg cggcgacttg gttttttctt
     9121 ttggcgacag cagggatttt gtcgaaaaaa tggaagcgca cgccggcaaa ttactttctt
     9181 ccggcaaacg ctgtttgagt ttgggcggcg accatttcat taccctaccg ttgttgcgcg
     9241 cccacgcccg ctatttcggc aaactcgcac tgattcattt tgacgcgcac accgacacct
     9301 acgacaacgg cagcgaatac gaccacggta cgatgttcta taccgccccc aaggaaggcc
     9361 tcatcgaccc gtcccgttcc gtacaaatcg gcatacgcac cgaacacagt aaaaaattgc
     9421 cttttactgt gttgaccgcc ccccaagtca atgaagacag tgttgaagag accgtccgta
     9481 aaatcaaaga aaccgtcggc aatatgcccg tttacctgac tttcgacata gactgcctcg
     9541 acccgtcgtt cgcccccggg accggtacgc ccgtatgcgg cggcttgagc agcgacaggg
     9601 cattaaaaat cctacgtggg ctgacggatc tcgacatcgt cggtatggat gttgtagaag
     9661 ttgccccctc ttacgaccaa tccgacatta ccgctttggc cggcgccaca attgccttgg
     9721 aaatgcttta ccttcaaggt gcgaaaaagg actgaacgtc cggcatcccc cgggttttcg
     9781 ccgtgccgtt caaacggcgt attcagtcta atgaaaattc aaatactgaa acaaaagttg
     9841 cccggagccg catatcggaa agacggtgaa atatctaaat atatcttata aaacaattag
     9901 ttaaatatta tttttccgat ttttcgggac ggtctttttt acggaggtca atatgatgaa
     9961 attgggtttc aaaccgatac ccctcgccat tgccgcagta ttgtgcgccc tggttttggc
    10021 actgcccgta cccgacgggg tcaagcctca ggcttggacg ctgctggcca tgtttgtcgg
    10081 cgtgattgcc gccattatcg gcaaggccat gccgttgggc gcgctgtcga ttattgccgt
    10141 cgggttggtc gcagtaaccg gcgtaaccgc cgacaaaccg ggcgcggcga tgagcgatgc
    10201 gttgagtgcg ttcgccaatc cgttgatttg gctgattgcc atcgcagtta tgatttcgcg
    10261 cggtttgctc aaaacagggc tggggatgcg tatcggatat ttgtttatcg ccgtttttgg
    10321 aagaaaaacg ctgggcatcg gttacagtct cgctctttcc gaactgctgc tggctcccgt
    10381 taccccttcc aataccgcgc gcggcggcgg cattatacat ccgattatgc agtcgattgc
    10441 cggcagttac ggctccaatc ccgcaaaagg cacagaaggc aagatgggta aatatttggc
    10501 tttggtcaac tatcattcca atcccatttc gtcggctatg tttattactg caactgcccc
    10561 caacccttta atcgtcaact tgattgccga aaatttaggc agtagtttcc gtctttcttg
    10621 gggggtgtgg gcgtgggcaa tggctgttcc cggcgttatc gcctttttcg ttatgccttt
    10681 gattttatat tttttgtatc cgcctgaaat taaagaaacg cccaatgccg ttcaatttgc
    10741 caaagaccgt ctgagggaga tgggtaaaat gtcggcagac gaaatcatta tggcggtcat
    10801 tttcggtatc ttgctgctgt tgtgggcaga tgttcccgcc cttattaccg gcaatcacgc
    10861 ttttagtatc aacgccaccg ccaccgcatt tatcggatta agcctgcttt tgctttccgg
    10921 tgtattgact tgggacgatg ttttgaaaga aaaaagtgcg tgggatacga ttatttggtt
    10981 tggcgcattg attatgatgg ccgcattttt aaataaactc ggactgatta aatggttctc
    11041 cggagtgttg gcggaaagtg tcggcggttt gggcgttagc ggcacggctg cgggcgtaat
    11101 cctcgtgctt gcttatatgt atgcgcatta tatgtttgcc agtactactg cacatattac
    11161 cgctatgttc ggcgcatttc tcgctgctgc cgtttcactg aatgcaccgg cgatgccgac
    11221 cgcgctgatg atggcggccg catccaacat tatgatgacc ctcactcatt atgcgaccgg
    11281 tacttcgcct gtgattttcg gttcgggcta caccacaatg ggagaatggt ggaaggcggg
    11341 ttttatcatg agcgtagtca attttctgat ttttttcgtt atcggcagca tttggtggaa
    11401 agttctgggg tattggtaag ggaaaaataa aataaatttc caatctgtgt ttatttgatt
    11461 gggcgactat tatcgtgaaa tatgccgtct aaagccttca gatggcatat ttgtgcgctt
    11521 gaatgttgca gaaagcggca ggcggcggtg taggaaaagc caaacaaaaa ccaaaccgcc
    11581 tatcaacttc tgataaacat aagcattaaa taatcagaag gttattcaat tacctaaacg
    11641 caaatttccc tgccgtatca catctattga aaataataca tcaaccggct cggaagctgc
    11701 ctgatcaggt gtttctactt gcggcgatga atcggcagcc ggttcggtat aggcagttgg
    11761 cgtgccgtcg gattgggtat ttaaatgcgg ttgtgcctcg ggcgtgtgta catcaggcac
    11821 ttcgggcgtg cgtgtctcgg atatttcggc agagttggtt tcctcagttt gttcaatgac
    11881 ttcagcttgg cggtatgagg aagaaccctg tatccacgcc agcgatttga gcggcatctt
    11941 catcttgccg tttttgccgc aggtcaggca gacggccgat ccggtgcggt ctttgagtac
    12001 agcatcgact ttctcgggcg cgatggtttt accctgtgtt tttgcccatt gcgcaatact
    12061 ttttttcaga gaggcgatgt caaggttgtt cttaccgtaa gggtcgcgga aggcggcaag
    12121 ccacaggttg cgatccgcat cttcattgag acccgccatt tgatagatga cggaggcggg
    12181 cgagccgctg gcgatggttt tggcaaactc gagcgcgtcg ggcgatttca tgcggacgca
    12241 gccgtgactc cgaaccccgg ggacgctggc cggcgcattg gtcccgtgta tgcccaaacc
    12301 gagtttgggg tcgcctaagc ggacaaaaac cggccccaaa gggttgtccg ggccggcggc
    12361 tatgattttt acgccgtcgc cgcgttcttt ctgtatggat ttggggatgt accaaacagg
    12421 gttataggct ttcgcaccga ttttatgttc gcctagattg gtttgcgtca tcgcccgacc
    12481 tactgcaacg ggataaacct tggtcagttt gccgtcggtg tagaggaaca ggcgttgctg
    12541 agggatgtta atgaagacat gttgaccttg tgcgacgggg gagacatcgg gaatgacggt
    12601 gtttgcgtat gaaaaaccgc ttatcaatag tgcagcagtg cggcagattg ttttattcat
    12661 atcaaaatat ggtgtgtgtc cgataggttt tcggcaaatc atacctgaaa ccgtaccaat
    12721 ttgtgcgaaa atatgcgctt cggtacagtg cggacggatt gggtaatggc aacggaaaca
    12781 aatgtcgcgg aaatttccgc cttggattat gaaggcaggg gtgtggcaaa ggtcggcggc
    12841 aaaacggttt ttattaaaag ggcattactt gattgtttga tgctgggttg gttcaggctt
    12901 taactcagga atatttacat cataatgaag gtttttaaac aacagcttga acaactcggc
    12961 gcgcaaaacc aatatcgttc gattccggat ttgattcatc aagggcggta tattacgcgg
    13021 gaaaactgca aaatgctgaa tatgtcgtct aatgattatt tgggtttggc atcagatgaa
    13081 aacttgcgcc ggtctttttt gcagcaatac ggcggtaatt ttccctcttt taccagttct
    13141 tcatcgcgtt tattaacggg caactttcct atttataccg atttggaaga gcttgtcgca
    13201 caacgtttcc aacgggaaag cgcgttattg ttcaatagcg gctatcacgc caatatcggc
    13261 attttgcctg ctttgacgac gacgaaaagt ttgattttgg cagataaatt tgttcacgcc
    13321 agtatgattg acggcatccg tttgagccgg tgtgcgtttt tccgttatcg tcataatgat
    13381 tatgaacatt tgaaaaatct gcttgaaaaa aacgtcggaa aatttgaccg cacttttatc
    13441 gttaccgaat ctgttttcag tatggacggc gatgtggcgg atttgaaaca gcttgtccaa
    13501 ttaaaaaaac agtttcccaa tacttatctt tatgtggatg aagcccacgc aatcggtgtt
    13561 tatgggcaaa acggattggg gattgccgaa cgggataatt tgattgccga gattgattta
    13621 ctggtcggca ctttcggtaa agccttagcc tcggtggggg cgtatgccgt ctgcaaccaa
    13681 gtattgaaag aatgtttgat taatcaaatg cgcccattga ttttttcaac cgcattgccg
    13741 ccgtttaatg tggcttggac ttattttatt tttgaacgat tgccgcaatt ctcaaaagaa
    13801 agaagccatc ttgagcagtt aagtgcattt ttacggcggg aagtggcgca tcggacgcaa
    13861 ataatgccga gccaaacctg tatcgtcccc tatattttag gcgggaatga agccgccctt
    13921 gccaaagcgg aatatctgca aaggcagggt tattattgcc tgcccatcag accgccgaca
    13981 gtacccaaaa acacatccag aatccgcctg tctttaacgg cagatatgac aacggatgaa
    14041 gtgcggcagt ttgcggtgtg cctgtaagga tatgatatga aaacaaaatt ttacaatcat
    14101 caaggcggac atttaatcct gtattttgca ggttggggaa tgccgcccga tgctgtaaat
    14161 catttgattt tgccggaaaa tcacgattta ttgatttgct atgattatca agatttaaat
    14221 ttggattttg atttttccgc ctatcggcac atccgtttgg tggcgtggtc aatgggcgtt
    14281 tgggcggcag agagggcatt gcaaggaata agattaaaat ccgcaacggc agtgaatggc
    14341 acaggtttgc cttgcgatga taatttcggt atcccttgca ccgtttttaa aggcacattg
    14401 gagaacctca cggaaaacac ccgtttaaaa tttgaacgca gaatgtgtgg cgataaagca
    14461 tcttttgaag attaccaaca atttcccgca cgcccgtttg gcgaaattca tcaagaactt
    14521 atcgcacttt ttgcgatgat cgggcaagat agacgtacag atcttatccg ctggacaaat
    14581 gccttggtcg gatcgggcga taaaattttt atgcctgcca atcagcaccg atattggaca
    14641 ccgcgttgca ccgttcggga aattgacgtc ggacattacc tgttttcaag attcacccat
    14701 tggtcggcac tatggaatca ctgactgcca taaataaatc gcgcattcgg caggctttcc
    14761 aaaaagcatt aaacgattat gaccggcacg ccttaatcca acaaaaaatg acgattaatt
    14821 taatgacgca tttgcaagat tatttgccgg atatgccatt ggaaaacgtg ttggaattgg
    14881 gctgcggctc aggaatgttg agtgccttgc tgcaaaaaca gatttcagcg aattattggt
    14941 tatttaatga tttgtgcaat gtgcagcccc aactggctga aaaactgccg caatcctttg
    15001 atttttattg cggcgatgcg gaaaactttc cttttcaacg acaatttgac ttaatcgcaa
    15061 gcgcatctgc cgtgcaatgg tttcatcaac ccgacgcttt tatcacccat tgcaaaacag
    15121 gcttgaaaac aaacggatta ttggcggttg caacctttgg caaagacaat ttaaaagaag
    15181 tccgccaaat tacaaatata ggcttaaatt acccgacttt atcccaatgg caggcttggt
    15241 tagccaaaga ttttgagctt ttatggtgtg aggattttac ggtaatacta gactttgata
    15301 cgccgtcaga tgtactcaaa caccttaaat atacaggcgt aacagccacg aaccaaaaaa
    15361 attggacaag aaaaaatctc aatggattta ttggcgatta cttgtcggcg ttcggtatgc
    15421 cgtcgggcaa agtgcgcctg acttatcatc cgttattttt tatcgcgcgc tactctgcgg
    15481 cgggcaggca ataaggcagc ttatgggcaa agttattttt atatcgggta ttgatactga
    15541 tgtgggtaaa aggtaatatg gcgaggcttg tgcagaaggc atattgttaa acgttaaatt
    15601 atggtatgat ttaaaactta caagtctatt tcagtaaatc gttaataata aaagcggaca
    15661 atggccgttg caggcggtca gctatccgct cgttacggta tcgggagtat cctttggaaa
    15721 actcattaat tatcggtttg gcactggcgg tattgctgat gcttttggtt atgcgtgcga
    15781 agcagggtaa gaaaacaccg aagcgcaaat cccaaggtgt cggcaatacg caggggcaga
    15841 cacccggaag caatgattcg gactgggtcg atcagattgg acaatcggtt tcagacggca
    15901 cgcaacccga ctggtcttgg aacgaaagtg ccgagaccgc atccgccgcc gtatccgcgc
    15961 aagaagtcga tccgcttacg gagtatcagg tttataagca attcggttat cagggcaagg
    16021 ctgccgaatc tttggctgcc tatttggacg gcattccgga tggtgaagcg aaacctgaaa
    16081 accttatccg cgagctgctc gatatcaatc tcgaagtggg ggatgtcgat gttttggcag
    16141 acaatctgca aaaatacggc aaactgattc cttccgaact tttggcaaaa tatatcgaac
    16201 aggcattaca gcgcgattca aaccatttgc gtatccgcgt cttggcggaa gaaggtttgg
    16261 gatggggtac tcaggagatt gaaaaacgtg cggaaggcgg ttctgcgacg gcagcttccg
    16321 catcgccccc gccggatgcc ggcggtaagg cttatgaagc cgaagaaatc aagcgcatcc
    16381 cgattgtgcg gggcaaaaaa gacgtgtcca gaatcagtca agaggaaatc ggtgcgattg
    16441 ccggtttggt ccgtgccgat caaggtgcga aaatccttaa agacaaagtc agctatgaaa
    16501 cggcatcgaa acaatacgac cgtgccatcc aaacttccga aaaacctgca aacctgatta
    16561 tcgatgcgtt gaaactcgat taccaatacg cggacataga ccgttttgcc ggacatttgt
    16621 ggaaacttta ccaaacgttg ggcaactacg gcaggcaggt taaagagcgg atgctggggt
    16681 gggggtacag cctgggttac catgaagttt tcgatgattt ggaaaaaggg ccgaacgacc
    16741 ggcaaatcaa agacatcggt atggggcacg ggtatctgcc gaaaaatata cagaaattca
    16801 aatcgcaaca tcgggatttg gtgcttcaag attcttcgtt gatcaacacc ggttcgtctc
    16861 cggcagacga tgcggttaag gaagtagagt cgttgctgat gtatggtcag attgaagcgg
    16921 caatggatgt gttggagcag gcggtattga aatatcccga cgagtcccag ctttatatta
    16981 cgttgatcga tatttatgaa cgtactgaag attgggatag gttggggcag tttttaaggg
    17041 tattgaggga acgtgcggac aggcttcctg aagaggtcgt tatgctgatg agccggctgc
    17101 tgcagcgtat gaatcaaaat attaaaaaaa taaaacggta cggaaaataa aaatggaagt
    17161 tcaactgccg aaaattaaaa cagtacgcgt aatgttggcg gggatgacgg cgcagcagga
    17221 atccgttttc aaaatggcat tcaaaatgca caataccacc cgttatgaaa cagtatcccc
    17281 ttcagacggc agtgccgtgc ccgatttggt tttggcggat accgatgccg agggcggttt
    17341 tgaactttgg aaagagcttg ccgagcgtta taaggatata cccgtcgccg tctgttcgga
    17401 gaaagttccc gattctgaag ttccctacct gcccaaaccg attcggtttg aaacattgtt
    17461 tcctatgctc cgcaaattgt tgcagggcga gaatgtttat gggaaatcgt ttattgcacc
    17521 cgcagaccgg tcggcgaaaa ataacgggaa tgtgcagcgt acggttacga tacgccagtt
    17581 taacccgaat aaaggattat tgggggcgtt gcggtttgcg gaaaagaaca ggcaggacat
    17641 cgctatcttg catggaaata agccggtcct tattgttttc ccctcgatac aacgggtttt
    17701 gctgacagaa agtgtgcaaa aactcgaaga attgtgcaaa gacgaaaatt tgcaggtcag
    17761 ctgcaagact gttcccgata acccgcaatg gcgcgaaaag gctaaagtag gcattatgtc
    17821 ctgtatgtgg cagttttcca tttggacagc gcagggcagg ttgatttatc cgatttctcc
    17881 cgatactccg tttacgttga aatcttggcc aaacctgacc cggttggcaa atgtgccggg
    17941 gtcgatacgc ttgtcggcat ttctgaccaa ggcatccgtc aaccttaacg tgttgtataa
    18001 agtgatgcct ttaaacctca atgatattct gaattatctt gcggcaacct atacaaccgg
    18061 gtttttgtcg gtagatttaa aaacggtttc acaacaggca tactccgata tggcggataa
    18121 aataaatatc ggagccgatt ctgcctctga tagtgaaatg atgaaaaaag cggaaaaaat
    18181 cacaacatca tcccaatccc agtcgcgcgg tcttctgcaa aggctgatga aaaaactgtt
    18241 gggcagctaa gaggcggaga gatgagagaa aataaaatta ttttcacagg acctgtcggc
    18301 gtagggaaaa ccactgccat tgcggctatt tcggacgaag cactcgttca gaccgatgct
    18361 tccgcatccg atatgacttt ggataggaaa aggaatacga cagtggcgat ggactacggg
    18421 gccatcagct tggatgagga taccaaagtc catttatatg gtacgcccgg tcaggaacgg
    18481 ttcaacttta tgtgggaaat cttaagccaa ggcagtatgg gtttggtctt gcttttagat
    18541 aatgcccgaa ccaatccgtt gaaagatttg gaattctttt tacattcgtt tcgagggctg
    18601 ctggagaagg cacccgtcgt tgtcggtatt accaagatgg atatacgctc tcagcccggt
    18661 atcgacgtgt atcacaaata tcttgcaaaa cataatctta atgttccggt ttttgaaatt
    18721 gatgcccgta aggaagatga cgtaaaacaa ttggttagcg caatgttatt ttctattgat
    18781 ccgggactgg aggtttaata tggaatcaac actttcacta caagcaaatt tatatccccg
    18841 cctgactcct gccggtgcat tttatgccgt atccagcgat gcccccagtg ccggtaaaac
    18901 tttgttgcac agcctgttga aagcggatgc ggacgaaatg gtcagcagtg agaagctgct
    18961 tacttgggcg gacaccgccg acatcgatac cgctttgaac ctgttgtacc gtttgcaaaa
    19021 actcgaattc ctctatggcg atgaaaacgg tcattcagac ggcatcaatt tgtcggacga
    19081 gcaattgccg ttgctgatgg aacaattgtc cggcagcggt aaggcgttat tggtcgatcg
    19141 gaacggtctg tatcttgcca acgccaattt ccatcatgag gcggcggaag agttggggtt
    19201 gttggcggca gaagtcgcac agatggaaaa gaaataccgg ctgctgatta agaacaacct
    19261 gtatatcaac aataacgctt ggggcgtttg cgatccttcc ggtcagagcg aattgacatt
    19321 tttcccattg tatatcggtt caaccaaatt tattttggtt atcggcggca ttcccgattt
    19381 gggcaaagag gcatttgtta ctttggtaag gattttatac cgccgttaca gcaaccgcgt
    19441 gtaaaacttg ggagagagga ggggttatgc agcaattatt gatttcaatc cttgaagatt
    19501 taaacaatac atctacggat attatcgcgt ctgccgttat ctcaaccgac ggattgccga
    19561 tggcgacaat gcttccttca catttgaatt cggacagggt aggggcgatt tctgccactt
    19621 tgcttgcttt ggggagtcgc tcggtgcagg aactcgcctg cggggaattg gaacaagtga
    19681 tgattaaagg aaaatcaggc tatatccttt taagtcaggc gggtaaagat gccgtgttgg
    19741 tgctggtggc aaaagaaacc ggcagacttg gtttaatcct attggatgcc aaacgtgcgg
    19801 caaggcatat tgcggaagcc atataacata taaagattgc gggcttgcag ataaagtgca
    19861 atcgattgtc aatttatatt gacacgttcg gtatttctgt tttattattc gtgcttattc
    19921 cccgatagct cagtcggtag agcgacggac tgttaatccg caggtccctg gttcgagccc
    19981 aggtcgggga gccaaatttc aaaaccctct aagtattttc ttagagggtt ttgttttacc
    20041 ggcggtcaga aacgcatttt tgagatgatt gttttgagat ggaataaaat ctttgcaaaa
    20101 ttcctttcgt gatggttatg aaaaaatagg ggctgtcctg gacaactagg ataaactcga
    20161 ttttatagtg gattaacaaa aaccagtacg gcattggctc gc
//
LOCUS       DAWKJW010000018        18993 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.018, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000018 DAWKJW010000000
VERSION     DAWKJW010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18993)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18993)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18993
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.018"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(111..938)
                     /gene="fghA"
                     /locus_tag="WJJ54_000517"
     CDS             complement(111..938)
                     /gene="fghA"
                     /locus_tag="WJJ54_000517"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011961786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HEZ7341416.1"
                     /translation="MKLMEQHQIFGGSQQVWAHHAQTLQCEMKFAVYLPNNSENQPLG
                     VIYWLSGLTCTEQNFITKSGFQLYAAEHQVIVLAPDTSPRGEQVPNDAAYDLGQGAGF
                     YLNATEQPWATNYQMYDYILNELPDLVEANFSTNGKRSIMGHSMGGHGALVLALRNRK
                     RYQSVSAFSPILSPSLVPWGEKAFTAYLGEDREKWQQYDASSLIQQGYKVQGIRIDQG
                     LEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAFLK"
     gene            complement(947..2056)
                     /locus_tag="WJJ54_000518"
     CDS             complement(947..2056)
                     /locus_tag="WJJ54_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HEZ7341417.1"
                     /translation="MKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDA
                     FTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVSSVKPGDHVIPLYTAECGECEFCCSGK
                     TNLCVSVRDTQGKGLMPDGTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEAN
                     HEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID
                     TNPSKFELAKQFGATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALES
                     AHRGWGQSIIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGVKGRSELPKMVEDSMKGD
                     IELEPFVTHTMTLDQINEAFDLMHEGKSIRAVIHY"
     gene            2204..2611
                     /locus_tag="WJJ54_000519"
     CDS             2204..2611
                     /locus_tag="WJJ54_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEZ7341418.1"
                     /translation="MTYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDN
                     DLQWLGLLQCLKNTGMSLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKR
                     YLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA"
     gene            complement(2962..3276)
                     /locus_tag="WJJ54_000520"
     CDS             complement(2962..3276)
                     /locus_tag="WJJ54_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEZ7341419.1"
                     /translation="MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLAR
                     GQRIEIRGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALKEN
                     AN"
     gene            complement(3287..4972)
                     /gene="rpsA"
                     /locus_tag="WJJ54_000521"
     CDS             complement(3287..4972)
                     /gene="rpsA"
                     /locus_tag="WJJ54_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEZ7341420.1"
                     /translation="MSMENFAQLLEESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLK
                     SESLIDVAEFKNAQGEIEVKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEA
                     MENGNILSGIINGKVKGGLTVMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKL
                     DKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGL
                     LHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQEKQRVSLGMKQLGEDPWSGLTRRYP
                     QGTRLFGKVSNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPSKVVQLGDEVEVMIL
                     EIDEGRRRISLGMKQCQANPWEEFAANHNKGDKISGAVKSITDFGVFVGLPGGIDGLV
                     HLSDLSWTESGEEAVRKYKKGEEVEAVVLAIDVEKERISLGIKQLEGDPFGNFISVND
                     KGSLVKGSVKSVDAKGAVIALSDEVEGYLPASEFAADRVEDLTTKLKEGDEVEAVIVT
                     VDRKNRSIKLSVKAKDAKESREALNSVNAAANANAGTTSLGDLLKAKLSGEQE"
     gene            complement(5127..5783)
                     /locus_tag="WJJ54_000522"
     CDS             complement(5127..5783)
                     /locus_tag="WJJ54_000522"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEZ7341421.1"
                     /translation="MNRQKVIAIDGPGASGKGTVAARVAAALGYDYLDTGALYRLTAL
                     YAQKQGVGWHDEENVSELAKKLPAVFSDSRILLGGEDVSDGIRTEAIGMGASAVAQLP
                     KVRASLLQRQRDFLTEKGLVADGRDTGSVVFPQAELKIFLTAESKIRAERRAKQIGIP
                     CEGLAFERILSDIEARDEADRNRKVAPLKQQPDALLLDTSRLTIEETVKKVLDWYRKV
                     "
     gene            complement(6027..6835)
                     /locus_tag="WJJ54_000523"
                     /pseudo
     CDS             complement(6027..6835)
                     /locus_tag="WJJ54_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232575.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
     gene            complement(6895..7401)
                     /locus_tag="WJJ54_000524"
     CDS             complement(6895..7401)
                     /locus_tag="WJJ54_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ7341422.1"
                     /translation="MANKAKSVTDDDKLTHHQAFILTIAGATVGFGATWRFPYLVGEN
                     GGGAYVFLFCIAMLVIGIPMILVENVIGRRKGVNALDAFGGPMNGKPIAKIWKLVGWM
                     GLLGAFGIMAYYMVLGGWVISYIVNIIGGNLNISSPVDGVVTKGFFAEHIETALGKLR
                     FIRCFLSP"
     gene            complement(7552..9876)
                     /locus_tag="WJJ54_000525"
     CDS             complement(7552..9876)
                     /locus_tag="WJJ54_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ7341423.1"
                     /translation="MRHSHYFQWLSLPLLSVAVTQQLYAQPNESLPTVELEPVVITID
                     KSGMALANRITQMPHTTKVIYEEQIQEQATGSRQLADVMAQLIPSLGVSSGTTSNFGQ
                     TMHGRQVQFLLNGVPLTGSRDISRQLNSINPNQVARIEVLSGATSIYGSGATGGLINI
                     VTKSDLEEEQFETRIGVHGSKLSSEGIGYQVGQSVAGVSENGNVLARLDVDYRTTGGA
                     FDANGKRIAPEPAQTDKQDSKSLSVNTNVDWQLDDKQNINLALTHYNDKQDTDYAPDY
                     GNRLAVLFGEKPSLNAIKGLSLSEQPKTTKSTFNINYHHDDLWGNTINTNAYYRREKG
                     RFYPFVAPFSIAKALPILQSMNSLDAYTKDLQASAYGVLQSESKADVLGARLALQRKF
                     DLAQKPVLLSYGIDYEQEKNRQGATGYDLTTFMQSNGLAFKDTGNRYTYGPDTTLKTY
                     GIFANANVALTDDLKISAGVRHQIIDSKTDGFVPPSESLLADLLNQNKVPYQAGTVNS
                     GKVKHHKTLFNLGANYSLTPNHSIFANFGQGYSLPDLQRVLRDVGTGFAVNSDNVEPI
                     SVNSYDVGWVGTFGDSHAKLTAFYNTSDKVTQFLKDYSVVVADTDERIYGAEFELNHK
                     INDSWTMGGSIAYTRGQYKDASGQYRELGAFRISPTKATAFAQYTTPNEHKLRLQLLA
                     IDGTQRAYKDSLIAKTNQNVRKTPEARISGYVVADLLGEIKLPKGQLNFGIYNLTNKK
                     YKSVFSQAAKVTYGELSSLSAQGRSYGISYTLNY"
     gene            complement(9923..11179)
                     /locus_tag="WJJ54_000526"
     CDS             complement(9923..11179)
                     /locus_tag="WJJ54_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ7341424.1"
                     /translation="MIISQQKNRHLLTMVALLYVAHALPLYFFNVALPAILRHQGVDI
                     RVIGMLSLLYLPWAFKFLWASYVDNYYCAKIGKRKTWLFFTQIIVVVGLFGLGFLQFS
                     ESEIVLFLSISFLVSLASATQDIAIDGYTVEQFDKSSFGLASAMQSFGVAFGSMVGGA
                     GTLWLYQRFDWQMATISLATTVVLISCSLWFLKDQDNPKHATNLSKASLIRLIKRPQT
                     KWLLALIVVFRFVEAPMMAMLNPMLVDFGFSLSQIGLLFSVFGAIVGIGSALLAGVLI
                     KYIDIVRCLILFGWLRTAVYALLCLGLLYPLLGDFLPAVGLLKTGFMSLMAISVLLIL
                     SVRYLTMTALYALFMNAANPDQAGTDFTLFVCVELLVYFIGGAMSGFLVHQFGYDKLF
                     LWLAIGSGVSMLILPTLIKKFSVTDC"
     gene            complement(11179..11577)
                     /locus_tag="WJJ54_000527"
     CDS             complement(11179..11577)
                     /locus_tag="WJJ54_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341425.1"
                     /translation="MPIFLNAIQNPNSSLPVFLLDFSGEISQDAFDDWLIAMSDLLAS
                     EQSFALIYHSRTGLTLPNNYRQIEAVWYKTHKESFFKYCKGLVRIVDDETQRQALDSP
                     AFHKAWRVPYAVVLSLTEAKAWINTKIGAV"
     gene            complement(11582..12184)
                     /locus_tag="WJJ54_000528"
     CDS             complement(11582..12184)
                     /locus_tag="WJJ54_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HEZ7341426.1"
                     /translation="MPTLSQGLPNNYIYRENGVEFGLVQIRYPEHIELLHRWMNMPHV
                     IPQWQLNKSLSELSVYFEKMLADDHQRLYLVSINGEWVGYAEVYEGARDRLSGYYTAD
                     KNDLGWHLLLAEAQAVGKGYLRAIMRLLSFFIFEHSPAKKIVGEPDASVKPYEVVAQE
                     LNYMPQYQIVMPEKTAMLYFCDKEGFYCKFAHYLNASIKE"
     gene            complement(12369..12617)
                     /locus_tag="WJJ54_000529"
     CDS             complement(12369..12617)
                     /locus_tag="WJJ54_000529"
                     /inference="COORDINATES: protein motif:HMM:NF018031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341427.1"
                     /translation="MSEFEFWNELSKIIDEFHHQHPELNERIALFDLKRPKFEKVCLN
                     RVRFFTRGYQDNANRPEPVVCEPICNPISPQFLRCVEH"
     gene            complement(12797..13108)
                     /locus_tag="WJJ54_000530"
     CDS             complement(12797..13108)
                     /locus_tag="WJJ54_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341428.1"
                     /translation="MEYLTTTIPTHFEIERTRLADVILTKLSDDKAVKLAKQMLDEHE
                     YIESLLVNTDPSVDDVKELANALYDHIRFEERELFPIAETVLSDDELFAIYEASDENV
                     K"
     gene            complement(13637..14329)
                     /locus_tag="WJJ54_000531"
     CDS             complement(13637..14329)
                     /locus_tag="WJJ54_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEZ7341429.1"
                     /translation="MKLIKYLQYQGIGSRKQCQWLIAGGYVFINGTCMDDTDADIDSS
                     SVETLDIDGEAVTVVPEPYFYIMLNKPEDYETSHKPKHYRSVFSLFPDNMRNIDMQAV
                     GRLDADTTGVLLITNDGKLNHSLTSPSRKIPKLYEVTLKHPTGETLCETLKNGVLLHD
                     ENETVCAADAVLKNPTTLLLTITEGKYHQVKRMIAAAGNRVQHLHRRRFAHLETENLK
                     PGEWKFIECPKF"
     gene            complement(14397..16373)
                     /locus_tag="WJJ54_000532"
     CDS             complement(14397..16373)
                     /locus_tag="WJJ54_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ7341430.1"
                     /translation="MSKLKTIALTASGLSVCPGFLYAQNTSSHQIGLAIMRLNSSILD
                     LPPTKQYFQSGSLWSELRQGFRMGEVNPELVRRHESKFIASHSYFNRVINRSRPYMYH
                     IANEVKKRNMPAEAALLPFIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDG
                     RHDVYAATDAALNYLQYLYGLFGDWPLAFAAYNWGEGNVGRAINRARAQGLEPTYENL
                     RMPNETRNYVPKLLAVRNIIAAPQSFGMNISDIDNKPYFQAVEPDRPLDNEAIARLAG
                     ITQSELLALNPAFNVPAFIPKSKRKLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAA
                     KTSLSDISTATGMSIADIKRLNNLNGNLVNAGRSILVAKNGKTLQTASESVVSIDIDN
                     TPNTYRSNMPAGTVNVGIARIRPAAAQTADITVAPLPQKTVRTEPDPLVRIAEPALAT
                     AAAQPQTEKQTAMPSETQTATLAQIVPQNDMQAADELMQLVARNNLRRQAEETISAVI
                     GTPDTVAEHNISSSPQHTVAADGKRRVRLETRVAKAADGEAEISPLHASIHRVVEGDT
                     LFNIAKRYNVSVADLIVANNIKGNTIQKGQVLRLAQAAPAQTRIEKVSYTARKGDTFK
                     SIAARFNIHIDDIRRLNPNLNTINPGQRVKLIGS"
     gene            16551..17216
                     /locus_tag="WJJ54_000533"
     CDS             16551..17216
                     /locus_tag="WJJ54_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEZ7341431.1"
                     /translation="MDAWFEDTAMGRYVAKLEQDFFGRYLDSYRFSGMCAVQVGGPWL
                     SLSEDVVCVPRDMSMSAENMALADVSADMLLFPHTLEGGIPSQILSEVHRILKPCGRL
                     MLTGFNPYSLWGFSRWFDGERLPEKRFCLPLPELKRQLADVGFDIEFGKFMVYLPPVS
                     SIGQIRFWRFMEKAGDRWWPQCAAVYGLVLVKRAAGVTPLPEWDGYLGGKALAAGAAR
                     VAD"
     gene            17268..18095
                     /gene="mutM"
                     /locus_tag="WJJ54_000534"
     CDS             17268..18095
                     /gene="mutM"
                     /locus_tag="WJJ54_000534"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HEZ7341432.1"
                     /translation="MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEI
                     LSGRQVLSCGRRAKYLIVRFQTGILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVF
                     SDGTVMRYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYERLKAQKRAV
                     KLALMDNAVVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLQRAIET
                     GGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPCPRCGGLVVKETLGQRGTFYCPNCQK"
     gene            18183..18950
                     /locus_tag="WJJ54_000535"
     CDS             18183..18950
                     /locus_tag="WJJ54_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEZ7341433.1"
                     /translation="MSSNKASFFTRLRRLCRLAVWLFKTGKNLRGIDGGCPESRNRAV
                     IELGRGVLAALDIGLEVGRPAPEHPNGVLVAANHVSWLDIFAMSAVYPSSFIAKQEIK
                     SWPVLGKMGQNAGTVFINRNSRRDIEPINRAVCETLQRGQNVSFFPEARTSSGLGLLP
                     FKAALFQSAIDAGAKVLAVALRYYDETGKRTARPSYADVGLPTCLWRIVSMKKLTIKV
                     DFVCVADAAESEDRYALKDKIEESIRAVVADDADIAV"
BASE COUNT         4811 a         4264 c         4724 g         5194 t
ORIGIN      
        1 ccgtagagtc ggctccttcc ggctcagacg gcatacgttt atgccggcac ttcttaccgc
       61 cctcgtgccg gctatcccaa aactgctttg aacactgaac gctctttggt ttacttcaaa
      121 aacgcggcgt gataagcaat atgctcgcca ataaaactgg cgatgaagta ataactatgg
      181 tcgtagcctt tgtggaagcg cacatcgacc ggctggtttg ccgcacgaca ggtttcgata
      241 aaatcttcgg tacgcaattg tgtcggcaaa aactcatctt ccaagccctg atcaatgcgt
      301 ataccttgca ctttatagcc ttgttgaatg agcgagctgg catcatattg ctgccatttt
      361 tcacgatctt cccctaaata agcagtaaag gccttttctc cccaaggcac gaggcttggc
      421 gataaaatag gcgaaaaagc agaaacgctt tgataacgtt tccgatttcg cagtgccaat
      481 accaatgcac cgtgtccgcc cattgaatgc cccataatgg aacgtttgcc gttagtagag
      541 aaatttgctt caaccaaatc aggcaattcg ttcaagatat aatcatacat ttgataattc
      601 gtcgcccaag gctgctcagt tgcattaaga taaaagcccg caccttgtcc taaatcgtaa
      661 gccgcatcgt tcggcacttg ctctccgcga gggctggtat caggggcaag cacaatcact
      721 tgatgttctg ctgcataaag ctgaaagcct gatttagtaa tgaaattttg ttccgtacac
      781 gtcaagccgg aaagccaata aatcacacca agcggttgat tttccgaatt atttggcaaa
      841 tagacggcaa atttcatttc gcattgcagc gtttgggcat gatgcgccca aacttgttgc
      901 gaaccgccaa aaatttgatg ttgttccatc agtttcatcg cataccttag tagtgaataa
      961 cggcgcggat cgatttacct tcgtgcatta agtcaaaggc ttcattgatt tgatcgagtg
     1021 tcattgtgtg ggttacaaac ggttctaact caatgtcgcc tttcattgaa tcttccacca
     1081 ttttcggcag ttcagagcga cctttcacac cgccaaatgc tgaacctttc caaacacgac
     1141 ctgttaccaa ctggaacgga cgcgttgaaa tttcttgtcc tgcacctgct acgccgatga
     1201 taatggattg accccaacca cggtgtgcac tttctaatgc ctgacgcatt acgtttacgt
     1261 tgccgataca ttcaaaggta tggtcaatgc cccatttatt aatgtctaac aacacatctt
     1321 tgatcggttt atcgtaatcg ttcgggttca aacaatccgt tgcaccgaac tgttttgcca
     1381 actcaaattt tgatggattg gtatcaatgg cgataatgcg gccggctttg gcttgacgcg
     1441 caccttgcac caccgccaaa ccaatcgcgc ctaagccaaa cacggcaaca gagtcgcctt
     1501 cttgcacttt tgccgtatta tgtaccgcac caatacctgt ggtaacgccg cagccgagca
     1561 aacatacttg ttcatggttg gcttcagggt tgattttcgc cagtgaaact tcggcaacaa
     1621 cggagtattc actgaaagtc gaacagccca tatagtgata gattggctga ccttgataag
     1681 aaaaacgcgt cgtgccgtcc ggcattaagc ctttaccttg tgtatcacgc actgagacgc
     1741 acaagttggt tttacctgaa caacaaaact cacattcgcc acattcggcg gtgtaaagcg
     1801 gaatcacgtg atcacccggt tttacgcttg acacaccttc gcccacagca acgaccacac
     1861 ccgcaccttc gtgtccaagc accacaggga atacgccttc aggatcgctt cctgataacg
     1921 taaacgcatc agtatggcac acgccagtgt gggtattgcg gattaacacc tcgcctttac
     1981 gcggcatttc tacgtcgatt tccacaattt gtaagggttg gttaggggcg aatgccaccg
     2041 ccgcacgaga tttgatggtt gaatcggctt gtttcatttc cattgtcttt cctcttaatt
     2101 cattgacaaa gttgccttgc ctgagcaaca tagcaacagt ttacacttta gagttaactc
     2161 taaagcaagt gttttttact gtttttgttt agaaggaggg aaaatgactt atactactgc
     2221 caaagccgcc gaaaaaatag gcatctccgc ccacacccta cgtttttacg acaaagaagg
     2281 tttgttgccc aatatcggac gtgatgaata cggtaaccgc tgttttaccg ataacgattt
     2341 gcaatggttg ggcttattgc aatgcttgaa aaatacggga atgagcttaa aagacatcaa
     2401 acgctttgcg gaatgtaccg tcattggcga cgataccatt gaagaacgcc tttccttgtt
     2461 tgaaaatcaa atagaaaatg tgaagtgtca aattgccgaa ttaaaacgct atttagattt
     2521 gcttgaatac aaattggcgt tttaccaaaa agcgaaagca ttaggctcgg taaaagctgt
     2581 aaatttgccg caaattcctg aaacggctta gttttagtgc aataagcagg atttttgtcc
     2641 tgttcgtaat agaaatcaaa aatttgttgt ttaaaaagcg gattgtaagc aatgatatag
     2701 tggattaaca aaaatcagga caaggcgacg aagccgcaga cagtgtaaat agtacggaac
     2761 cgattcactt ggtgcttcag caccttagag aattgttctc tttgagctaa ggcgaggcaa
     2821 cgccgtactg gtttttgtta atccactata aaaaaatcca cgctctaatc cgttgcttgc
     2881 ttggctcaag gtattgaagc aacggatgaa gttaaaccac agaaaaaacg ccgcgtaaca
     2941 gcggcgtttt gatgctaagg tttaattggc attttctttt aaagccaagt cgacccgctc
     3001 gcgcaattct ttaccgggct tgaagtgggg tacatgtttt tcaggtactt ccacacgctc
     3061 gccggttttg ggattgcgac cgatgcgggc aggacgatgg ttcaaatcga agctgccgaa
     3121 accgcggatt tcgatgcgtt gacctcgggc aagcgatcta gtcatggtgt caaccaagac
     3181 ttttacgctg tactctacgt cttttgccag aagatgcgtg ccgtttttgg cggcaaacac
     3241 ttctgccaaa cgaaccatta actcagactt tgtcatgtct gcaaccttat tcttgttcgc
     3301 cggagagttt ggctttcagc aggtcgccca agctggtggt gccggcattc gcattggcgg
     3361 cggcattgac ggagttcagt gcttcgcggc tttctttggc atctttggct ttaacggaaa
     3421 gtttgatgct gcggtttttg cggtcaacgg taacgatgac ggcttcaact tcgtcgcctt
     3481 ctttcagttt ggtggtcaaa tcttcaacgc ggtcggctgc aaattcggaa gcaggcaggt
     3541 agccttctac ttcgtcagac agggcgataa cagcaccttt ggcgtcaaca gatttcacgg
     3601 aacctttaac caaagaacct ttgtcgttca cgctgatgaa gttgccgaac ggatcgcctt
     3661 ccagttgttt gatacccaag gagatgcgtt ctttttccac gtcgattgcc aatacgacgg
     3721 cttcgacttc ttcgcctttt ttgtatttgc gtacggcttc ttcgccggat tcggtccagg
     3781 acaggtcgga caggtgaacc agaccgtcga tgccgccggg caggccgacg aatacgccga
     3841 aatcggtaat ggatttaacc gcaccggaga ttttgtcgcc tttgttgtgg ttggcggcaa
     3901 attcttccca aggattggct tggcattgtt tcatacccaa agagatacgg cggcggcctt
     3961 cgtcgatttc caaaatcatg acttcgactt cgtcgcccag ttgtacgact ttgctcgggt
     4021 gtacgttttt gttggtccag tccatttcgg agacgtgtac caaaccttcg atgccttgtt
     4081 cgatttcgac gaatgcgccg tagtcggtca ggttggatac tttgccgaac aggcgggtgc
     4141 cttgcggata acggcgggtc agaccgctcc aaggatcttc gcccagttgt ttcataccca
     4201 aggaaacgcg ttgtttttct tggtcgaatt tcaatacttt ggcttcaact tcctgaccga
     4261 cttccaagac ttcgctcggg tgtttcacgc gccgccatgc caaatcggtg atgtgcaaca
     4321 gaccgtcgat gccgcccaag tcaacgaatg caccgtaatc ggtaatgttt ttaacgatgc
     4381 ctttgatgac ggagccttct tgcaggtttt ccagcagggc tttgcgttct tcacccaaag
     4441 tggcttccag aacggcgcgg cgggaaacaa cgacgttgtt gcgttttttg tccagtttga
     4501 tcactttgaa ttcgatctct ttgccttcga agtgagaagt gtcttttaca ggacgtacgt
     4561 cgaccaaaga acccggcagg aatgcgcgga tgctgctaat cataacggtc aggccgcctt
     4621 tgactttgcc gttgatgatg ccggacagga tgttgccgtt ttccatggct tcttccaggg
     4681 caatccaatc ggcagcgcgt ttggcttttt cgcgggacag tttggtttcg ccgaagccgt
     4741 tttcgacgga ttcgatggta acggtaacga agtcgccgac tttaacttca atttcgcctt
     4801 gagcgttttt gaattcagct acatcaatca gggattctga tttcagacct gcgtttacgg
     4861 taacgaagtt ttggtcgatt gccactactt cagcggtaat cacctcaccc gggttcattt
     4921 cttgcagggt aaagctttct tccaacagct gagcaaaatt ttccatagac atatataact
     4981 cttttcggta caccgccaag gggtgcgggg tgggttggtg gatgtctgcc gtccttggca
     5041 gggcagacgg gtaaataagg tttcagacgg catatgggga aattcatgct gtctgaaacg
     5101 caatgcgggc gattatacct gaaaatttaa actttacgat accaatcaag cacttttttt
     5161 acagtttctt ctatagtcag gcggctcgta tccaaaagca gggcatcggg ttgttgtttc
     5221 aggggggcaa ccttgcggtt tcggtctgcc tcgtctctgg cttcgatgtc ggacaggatg
     5281 cgctcgaatg ccaaaccttc gcaggggatg ccgatttgtt tggcgcggcg ttcggcacgg
     5341 attttggatt ctgccgtcag gaagatttta agttcggctt gggggaagac gaccgatccg
     5401 gtgtcccgtc cgtcggcgac cagtcctttt tcggtcagaa aatcgcgttg gcgttgcagc
     5461 agggaggcgc ggactttagg caactgtgcg actgcggatg cgcccatgcc gatggcttct
     5521 gtccggatgc cgtctgaaac gtcttcgccg ccgagcagga tgcggctgtc tgaaaatacg
     5581 gcgggcagtt tttttgccag ttcggaaacg ttttcttcat cgtgccatcc tacgccttgt
     5641 ttttgtgcat atagggcggt caggcggtag agtgcgccgg tatcgagata atcgtatccc
     5701 aatgcggcgg caacgcgggc ggcaaccgtg cctttgcccg atgcgcccgg gccgtcgatg
     5761 gcgatgactt tttgtctgtt cataaggggg attcctgatg gtttggggta tgggttttgc
     5821 cgtctgaagg atgtatttcc cattggggcg gattctacct gttttaaagg acgattgtct
     5881 aagcagacgg aacgccgcct gcccggaaac atccgacaga agtcggcaag ccggttcgga
     5941 tttcggcgtt gcgggtattg tggcgggcat caaggcaatg ctgtctgaaa gaggtatgac
     6001 cttcagacgg catcgattgc tgcggattag aacaggttgc tgacgaaaat cagcagaatc
     6061 accagcggca caagatattt cacataagca aaccaaatat tgaccgtcgt atggttgcct
     6121 ttataaagca attcgtcctt cgcttcgtcc ttcatcacaa aaccggcaaa cagcgcggaa
     6181 ccgagcgcgg tcagcataaa caagatgttg ccgctgatgt agtcgaaggc atcgaaaata
     6241 tttttgccga acacggaacg tctttccacg gaccatagct cagaatggac gggatgttgc
     6301 cgaaaatgaa gatggcagcc aatacaatcg taatcgcggc ggtacggcgg attttggttt
     6361 tttcctgaat ggtcgtaatc aacacttcat aaatggtcag cgaagttgtc aacgcggcaa
     6421 tcaggagcag cgagaagaaa atcacggcga acacagatcc cgcccacata tgtgagaaca
     6481 caatcggcaa gctttggaac accaaagtcg ggccggaatc gggggcaacg ccgaagctga
     6541 agagcgacgg gaaaatcata aagcccgcaa gtatggcgat gatggtattg gtaattgccg
     6601 tgataactgc cgtctgaacc agattttcgt ttttatccaa atagctggac aaggtaatca
     6661 tcacgccgaa acccaagctc agggcaaaaa atacctgccc caaaacgaag acgaacagtt
     6721 cggcggtaat cttgctgaaa tcaggtttca gatagaaagc aaccccttcc attgcgcccg
     6781 gaagggtaac gttgcggacg accatcgcga ttaggaacaa aaacagcagc ggcatcagct
     6841 attttgccgc tttttcaatg ccgccgataa cgcctttgac caaaatccat tggttcacgg
     6901 cgacaaaaag cagcgtataa aacgcaattt cccaagggct gtttcaatgt gttcggcaaa
     6961 gaagcctttt gtaaccacac cgtcgacggg gctggaaata ttcaaatttc ctccaataat
     7021 attaacgata tagctgatta cccagccgcc gagtaccatg taataagcca tgatgccgaa
     7081 cgcgccgagc agccccatcc agccgaccag tttccaaatt ttggcaatgg gtttgccgtt
     7141 catcgggccg ccgaacgcat ccagcgcgtt cacgcctttg cgccgtccga tgacattttc
     7201 caccaaaatc atcgggatgc cgataaccag catcgcgata cagaataaaa acacatacgc
     7261 gccaccaccg ttttcaccga ccaaatacgg gaaacgccac gtcgcgccga aaccgacagt
     7321 cgcgccggca atggtcagga taaaggcttg atggtgggta agtttgtcat catcggtgac
     7381 ggatttggct ttgttggcga tgaccaagcc caaatggtgc tggcgagata ggggctgtaa
     7441 ggtggggtgt cgtttcatgg gggttcctgt tggtaaatta aattttatta taaaataaaa
     7501 aaaccacaaa cactagggcg atgtttgtgg tattgtggca cataatgctg atcaataatt
     7561 taaggtataa cttatcccat aacttctccc ctgtgcagac aagctggata attcaccata
     7621 agtcactttg gcagcttgac taaatacact tttatatttt ttatttgtca agttataaat
     7681 cccaaagttt aactgacctt taggtagttt gatctcaccc aataaatccg ccacgacata
     7741 gcctgaaatt ctagcctccg gggttttgcg gacattttga ttggttttgg caatcaggct
     7801 gtccttgtaa gctctttgtg taccatcaat ggcaagtagt tgtaagcgta acttatgttc
     7861 gtttggcgta gtatattgag caaaagcggt ggctttggta gggctgatac gaaacgcccc
     7921 aagttctcga tattgaccgc ttgcatcttt gtattgcccc cgtgtatagg caatactacc
     7981 gcccatggtc cagctatcgt taattttatg gtttaattca aactctgctc catagatacg
     8041 ttcgtcagta tcggcaacaa ccacgctata atcttttaaa aactgagtga ctttgtctga
     8101 tgtattataa aatgctgtca gtttagcatg actatcgcca aatgttccca cccaacccac
     8161 atcataacta ttgactgaaa ttggctcaac attatcagaa ttaaccgcaa aacccgtccc
     8221 aacatctctt agcacccttt gtaaatcagg taaactatat ccttgcccaa aattggcaaa
     8281 aatactgtga tttggagtta atgagtaatt tgctccaaga ttaaataagg ttttgtgatg
     8341 cttcactttg ccagaattga cagttcctgc ttgatacggc actttattct ggtttaataa
     8401 atcggctaat agcgactcac tgggtggcac aaaaccatct gttttactgt ctataatttg
     8461 atgccgtaca cctgccgata tttttaaatc atctgtcaaa gcaacattag cattggcaaa
     8521 tatgccgtag gtttttaagg tggtgtcagg tccataagtg taacggttgc cagtgtcttt
     8581 aaatgccaag ccgttgcttt gcataaaggt agtcaaatca tagcctgtcg ccccttggcg
     8641 gtttttttct tgttcataat cgataccata actaagtagt acaggttttt gagcaaggtc
     8701 aaattttctt tgcaaagcca gtcttgctcc caatacatct gccttggatt cggattgtaa
     8761 caccccatag gcgctagctt gtagatcctt ggtataagca tccaaagaat tcatgctttg
     8821 taaaataggc agggctttgg cgatcgaaaa cggggcaaca aagggataaa atctgccttt
     8881 ctctctgcga taataagcat tggtattgat ggtgttaccc cacaaatcat catgatgata
     8941 gttgatatta aaggtgcttt tggtggtttt tggctgttct gataatgata agcctttgat
     9001 ggcatttaat gaaggctttt ctccaaacaa caccgcaagg cgattaccat aatcaggtgc
     9061 ataatcggta tcttgtttgt cgttataatg cgtcaatgcc agattgatat tttgcttgtc
     9121 gtcaagttgc caatcaacat ttgtattgac acttaggctt ttgctgtctt gcttatcagt
     9181 ttgggcaggc tcaggagcga tgcgtttacc gttagcatca aatgcccctc ctgtggtgcg
     9241 atagtcgaca tcaagtcgtg caaggacatt accattttcg ctgacacctg ctacactctg
     9301 acctacctga taaccgatac cttcactgga taatttacta ccatgtacac cgatgcgggt
     9361 ttcaaattgc tcctcttcca aatcagactt agtaacgata ttaatcaaac cgcctgttgc
     9421 tccagaccca taaatactgg ttgctcctga taaaacttca attctagcaa cttgattggg
     9481 attgatacta ttaagctgtc tagagatgtc tcgcgaacct gtcaaaggca cgccatttaa
     9541 caaaaattgc acttgacgac cgtgcatggt ttgcccaaag ttactggtag tgccactact
     9601 tacccccaaa cttggaatga gctgtgccat cacatcggca agctgtcgag agcctgttgc
     9661 ttgctcttga atttgctctt cataaataac tttggtggta tggggcattt gcgtgatacg
     9721 attggcaagt gccataccgc tcttatcaat ggtaataacc acaggctcta attcaaccgt
     9781 tggtaatgac tcattgggtt gagcgtacaa ctgctgagtt actgccacac ttagtaaagg
     9841 caaagataac cattgaaaat agtgggaatg acgcataaat tactccttat ggaaaagtaa
     9901 aattttaaca gtctgttacg gtttaacagt ctgttacgga aaattttttt atcaatgtcg
     9961 gcaaaataag cattgacacc ccagaaccaa tcgcaagcca caaaaatagc ttgtcatagc
    10021 caaactgatg tactaaaaat ccactcatcg ccccgccgat aaaatacaca agcaactcca
    10081 cgcacacaaa caaagtaaag tccgtgccag cttggtcggg attggcagca ttcataaaca
    10141 gagcatataa ggcagtcatt gttaaatagc gaacagataa aattagcaaa acactaattg
    10201 ccatcaagct cataaaccct gtttttaata aacctaccgc aggtaaaaaa tcacccaata
    10261 aaggatatag caatcctaaa cacaacaaag cataaactgc cgttcttagc catccgaata
    10321 atataagaca acgtacaatg tcgatatatt tgattaatac ccctgccaaa agtgctgaac
    10381 caatcccaac aatcgctcca aataccgaaa acaaaagccc aatctgagac agtgaaaaac
    10441 caaaatccac aagcattgga tttagcattg ccatcatcgg agcttccaca aagcgaaaca
    10501 ccacaatcaa agctagtaac catttagttt gcgggcgttt gataagccta ataagacttg
    10561 ctttggaaag attggtagca tgtttgggat tgtcttgatc ttttaagaac catagtgaac
    10621 acgaaataag cacaacagtt gttgccaaac tgattgttgc catttgccaa tcaaatctct
    10681 gatatagcca cagtgtgcca gcaccgccta ccatactacc aaacgccact ccaaaacttt
    10741 gcatggcact tgccagccca aaggatgact tatcaaattg ttccactgta tagccatcaa
    10801 tagcgatatc ttgggtggca cttgccaaag acaccaaaaa acttatgctc agaaataata
    10861 caatctcaga ctcagaaaac tgtaaaaagc caagcccaaa cagcccgact accacgataa
    10921 tttgagtaaa aaataaccaa gttttgcgtt tgccgatttt ggcacaataa taattgtcca
    10981 cataacttgc ccacagaaat ttaaacgccc acggcaaata taaaagtgaa agcatgccaa
    11041 tcaccctaat atcaacgcct tgatgtctta aaatggcagg caatgccaca ttaaaaaaat
    11101 acaaaggcaa ggcatgggca acatataaca gtgccaccat cgtcaaaaga tggcgatttt
    11161 tttgttgtga gataatcatc agaccgcccc tattttagtg tttatccatg ctttggcttc
    11221 agtcagtgac aacaccaccg cataaggcac tcgccatgct ttatgaaaag caggactgtc
    11281 taaggcttgt ctttgagtct catcatcaac aattctgact aatcccttgc aatatttaaa
    11341 gaacgattct ttgtgcgtct tgtaccaaac cgcctcaatt tggcggtagt tattagggag
    11401 tgtcagccct gtccgactat ggtaaatcaa ggcaaaactc tgctcactgg ctaacaaatc
    11461 actcatagca atcaaccaat catcaaatgc atcttgacta atctcgcctg aaaaatcgag
    11521 taaaaataca ggtaaggagc tatttgggtt ctgaatagca tttagaaaaa taggcataac
    11581 atcactcttt aatgctggca tttaaataat gggcaaactt acaataaaac ccttctttgt
    11641 cacaaaaata taacattgca gttttttcag gcattacaat ttgatattgg ggcatatagt
    11701 ttaattcttg agcgactacc tcatagggtt ttacacttgc atcaggttca cccacaattt
    11761 ttttagcagg tgaatgttca aaaataaaaa agcttagtag acgcatgatg gcacgcaagt
    11821 accctttgcc aacagcctgt gcctctgcta gtaacaaatg ccaacccaaa tcatttttgt
    11881 cagctgtata ataccctgat agtctatccc ttgccccttc ataaacttcg gcgtaaccaa
    11941 cccattcgcc attaatacta accaaataca aacgctggtg atcatcagcc aacatttttt
    12001 caaaataaac agacagctca gacaatgatt tattgagttg ccattgaggg ataacatggg
    12061 gcatattcat ccaacgatgc aacaattcaa tatgttcagg gtagcgtatt tgcaccaacc
    12121 caaattcaac cccattttct ctgtaaatat agttgtttgg caacccctga gataaagttg
    12181 gcaatcgatt gattttactg cattgatctt gattaaaaga atcggtatag atttctagca
    12241 tttctattct ctcattaggg tgtgttgaat atttggtatt tgcaatgaaa aatgagaaaa
    12301 atcgcacgtt tttcatgcaa aaactaataa aagcgttaaa attttcatca tttttacaaa
    12361 taatgttatc aatgttcaac acaccttaga aactgtggtg atattggatt gcaaattggt
    12421 tcgcaaacca cgggttctgg acggttggcg ttatcttgat aacctcttgt aaaaaagcga
    12481 acacgattta ggcacacctt ttcaaatttt ggtcttttta aatcaaataa agcaatcctc
    12541 tcatttagct ctggatgttg atggtgaaat tcatcaataa tctttgataa ctcattccaa
    12601 aattcaaatt cagatatatt ataatattaa agctactttg tggcggacag cgtggagcat
    12661 agcaccgata aacctgtgtt taatcagatt gtgggattaa aagatgggtt taaataactt
    12721 ttagcaattt taaaattaaa cgaaagccaa acgtggtgtt tggcttttta attccattgc
    12781 ccagctttta actcgttcat tttacattct catcactcgc ctcataaatg gcaaaaagct
    12841 catcatcgct tagcaccgtc tcagcaatgg gaaaaagctc tcgctcttca aagcggatat
    12901 ggtcatacag agcatttgca agctccttga catcgtcgac gcttgggtcg gtattgacaa
    12961 gtaggctctc aatgtattca tgctcatcaa gcatttgctt tgccaattta accgctttgt
    13021 catcggataa ttttgtcaaa ataacatcgg caaggcgtgt tcgctcaatc tcaaaatgcg
    13081 tgggaatggt agtggtcaga tactccactt aggttaatcg gctggatcag gtttgacgat
    13141 tggtgttgga agacatattg caacagtgtt tgattaagat gagatggaat ttctacacgc
    13201 gttttttaac aggaactgac tgattgtttt ttaagtgtgt agttattttc actaatagag
    13261 ttatatttta taatggatat ttctgatttg cataaatcaa caaggattga atcagatttt
    13321 atagatagat gaatcgttta tttttctaca ctgggacggt gaaataaaat ttcatatgtc
    13381 atatgatcgg gaatgctgcg tcagtaacat atgtagtatg tgtagtaaac gaagataaaa
    13441 aaaccatcta tacaagggga gaagtataga tggcaaaaca cattacgggg aaaacgtctt
    13501 actcataagc ctgcttgaac aggcgttact cagacaaatg gattatatcg taaattgatt
    13561 ttttgcgtta aattgggtta aaccatatat ttaatgagta tgtggatgaa tataaatgga
    13621 attcttggat gttatttcag aattttggac attcgataaa tttccattcc ccgggtttga
    13681 ggttttctgt ttccagatgt gcgaatcgcc ggcgatgaag gtgttgcacg cggttgccgg
    13741 cggcggcgat catgcgtttg acttggtggt attttccttc ggtaatggtc agcagcaggg
    13801 tggtcgggtt tttcaaaacg gcatcggcgg cacaaacggt ttcgttttcg tcgtggagca
    13861 gcacgccgtt tttcaaggtt tcgcagagcg tttctcctgt ggggtgtttg agcgttactt
    13921 cgtacagctt gggaattttt ctgctcggcg aagtcaggct gtggttcagt ttgccgtcgt
    13981 tggtaatcag caatacgccg gtcgtatctg catccagcct gccgaccgcc tgcatatcga
    14041 tgttccgcat attgtcgggg aacaggctga atacgctgcg gtagtgcttg ggtttgtgcg
    14101 aagtttcgta atcttcaggc ttgttgagca tgatgtagaa atagggttcg ggaacgacgg
    14161 ttactgcttc cccgtcaata tccaacgttt cgacggatga ggaatcgatg tctgcatcgg
    14221 tgtcgtccat gcaggttccg ttgatgaaaa cataaccgcc ggcaatcagc cattggcact
    14281 gcttgcggct tcctatgcct tgatattgca ggtatttgat aagtttcatg atggtatggg
    14341 aaatgtggga tgaaaaagac aggactgaga aagtcctgtc atgtgccgta tccgaatcag
    14401 cttccaatca gtttgaccct ctgtcccgga ttgatggtgt tcaggttggg attgagccgg
    14461 cggatgtcgt cgatatggat attgaagcgc gcggcgatac ttttgaaggt gtcgcctttg
    14521 cgcgcggtgt aggatacttt ttcaatacgg gtttgggcag gggctgcctg cgccaggcgg
    14581 agtacctgtc ctttttggat ggtgttgcct ttgatgttgt tggcgacaat caggtcggct
    14641 acactgacgt tgtagcgttt ggcaatgttg aacagggtgt cgccttctac aacgcggtgg
    14701 atgctggcat ggagcgggga gatttcggct tcgccgtcgg cagctttggc tacgcgcgtt
    14761 tccaaacgta cccggcgttt gccgtcggcg gcaacggtat gttgcggaga tgaggaaatg
    14821 ttgtgttcgg caactgtgtc aggcgtgccg atgacggcag agatggtttc ttcagcctgt
    14881 cggcgcaggt tgtttcgggc aacaagctgc atgagttcgt ctgccgcctg catgtcgttt
    14941 tgggggacga tctgcgcgag tgttgcggtt tgggtttcag acggcatggc ggtctgtttt
    15001 tcggtttgag gttgcgctgc ggctgtcgca agggcaggtt cggcaatacg gacaagggga
    15061 tcgggttccg tacggacggt tttctgcggc aaaggtgcga cggtaatgtc cgctgtctgt
    15121 gcggcggcgg gtcggattcg ggcaatgccg acgttcaccg tgcctgccgg catattggaa
    15181 cggtaggtgt tgggcgtatt gtcgatgtcg atggaaacga cggattccga tgccgtctga
    15241 agggttttgc cgttcttggc gacaaggatg ctgcgtcctg cgttgacaag gttgccgttc
    15301 aggttgttga ggcgtttgat gtcggcaatg ctcatgccgg ttgccgtcga gatgtcggac
    15361 aagctggttt tggcggcagg cgtatagact tcccatgaaa acaggctgtc gggtgcggcg
    15421 ttgaggtagt tgctttggaa ggtttgtacg gacgcgacag gaagcagcag tttgcgtttg
    15481 cttttgggga tgaacgcggg gacgttgaat gcggggttta gggcgagcag ctcgctttgc
    15541 gtgatgccgg caagccgggc gatggcttcg ttgtcgagcg gacggtccgg ttcgactgcc
    15601 tgaaaatacg gtttgttgtc tatgtcgctg atattcatgc cgaaagattg gggggcggca
    15661 atgatgttgc gcacggcgag cagcttgggg acatagttgc gcgtttcgtt gggcatacgc
    15721 aggttttcgt aggtcggttc gagcccttgg gcgcgggcgc ggttgatggc gcgtccgacg
    15781 ttgccttcac cccagttgta ggcggcaaag gcaagcggcc agtcgccgaa cagtccatag
    15841 aggtattgca gatagttgag tgcggcatcg gtggcggcgt aaacgtcgtg cctgccgtcg
    15901 taaaccggtg ttttttccag gccgtaatgc ctgccggtag cgggcataaa ctgccataat
    15961 cctgatgcgc cgacgtgtga tttggctttg gtgacgaacg cgctttcgat gaagggaagc
    16021 agggcggctt cggcgggcat attgcgtttt ttgacttcgt tggcgatatg gtacatatag
    16081 ggtctactcc ggttgatgac cctgttgaaa tagctgtggc ttgcgatgaa tttgctttcg
    16141 tggcggcgta ccagttcggg attgacttcg cccatccgga agccttggcg cagctcgctc
    16201 cacaggctgc cggattggaa atattgtttt gtcggtggca ggtcgagtat tgaagagttt
    16261 aagcgcataa tcgccaaacc gatttggtgt gatgaggtgt tttgggcgta taggaaaccc
    16321 ggacaaacgg acagacctga cgcggtcagg gcgatggttt tgagtttgga catgatttat
    16381 atcggcggaa taaacatatt ttatcgtccg atggtactgt ttgactgaaa aagcgtcaag
    16441 ttttacagga actttatgcg gattcggaaa tgggcggccg atgtgttttt tgacagaaat
    16501 cctgtttgga atagaatatc ggcaggcaat ctgtttgaaa cggacgcaat atggatgcat
    16561 ggtttgaaga tacggcgatg gggcggtatg ttgcaaaatt ggaacaggat ttcttcgggc
    16621 ggtatctaga ttcataccgt ttttcgggaa tgtgtgcggt tcaggtgggc ggtccgtggc
    16681 tgagcctgtc tgaagatgtt gtctgtgtgc cgcgagatat gtcgatgtcg gcggagaata
    16741 tggctttggc ggatgtttct gcggatatgc tgctttttcc gcatacgctt gaaggcggta
    16801 tcccttcgca aatcctgtcc gaggtgcacc ggatattgaa accgtgcgga cgcttgatgc
    16861 tgacgggttt caatccgtat tcgctctggg gattcagccg ttggtttgac ggcgaacgcc
    16921 tgccggaaaa acggttttgt ctgccgctgc ccgagttgaa aaggcagctt gcggatgtcg
    16981 gtttcgatat tgaatttggg aaatttatgg tgtatctgcc gcccgtttcg tcgatcgggc
    17041 aaatacgctt ttggcggttt atggaaaagg cgggcgaccg ttggtggccg caatgtgccg
    17101 cagtgtacgg tttggttttg gtcaaaaggg cggcgggcgt aacgcccctg cccgagtggg
    17161 acgggtattt gggcggcaaa gcccttgcgg cgggtgcggc aagggttgcg gattagggac
    17221 agccgtcttt cagacggcat ctgtcagaag aaatgtcggg aggggttatg cctgaattgc
    17281 cggaagtgga aacgacgttg cgcggcatcg cgccgcatat tgaagggaaa acggtggaag
    17341 ccgtggtatt gcgccaattg aagctgcgct ggcagatcaa tcccgatttg ggggagattt
    17401 tgtccggccg gcaggttttg tcctgcggca ggcgggcgaa gtatctgatt gtccgtttcc
    17461 aaacggggat tttgctgatt cacttgggga tgtcgggcag cttgcggatt tttacgccgt
    17521 cggacggacg tatcggcagg ccggacagac acgatcacgt cgatattgtg ttttcagacg
    17581 gcacggtcat gcgttaccgc gatccgagaa agttcggcgc gatactttgg tatgagggaa
    17641 ttgaagagca tcatccgctg ctggaaaaac tggggccgga acctctgtcg gaagcatttt
    17701 gtgcggatta tctgtacgaa aggctgaagg cgcagaaacg ggcggtcaaa cttgccctga
    17761 tggacaatgc ggtcgtggtc ggtgtgggca atatttatgc caatgagagc ctgttcagag
    17821 cgggcatttc gccccaccgt cctgccaacc gtctgaaaaa gaaagagtgc gcgcttttgg
    17881 ttgaaaccgt caaagcggtg ttgcagcgcg ccattgaaac gggcggcagt accttgaggg
    17941 attttgtgga cagcgacggc aaaagcggct acttccaaca ggaatatacg gtgtacgggc
    18001 ggcacaatca gccgtgcccc cggtgcggcg gtttggttgt gaaagaaact ttggggcagc
    18061 gcggcacgtt ttattgcccg aactgtcaga aatagggctg aaaacggttt cagacggcat
    18121 tttatcggta tgccgtccga acgtttcaac aacaaacacc gattatcggg aaagaattgc
    18181 tcatgtcttc aaataaagct tcatttttta cacgtctgcg ccgcttgtgc cgtttggcgg
    18241 tctggctgtt caaaaccggg aaaaacctgc gcggtattga cggcggttgc cccgagtcgc
    18301 gcaatcgggc ggtaatcgag ttgggcaggg gggttttggc ggctttggat atcggattgg
    18361 aggtgggcag acccgcaccc gaacatccga acggtgtctt ggttgccgcc aaccacgtgt
    18421 cctggctgga tattttcgcg atgagcgcgg tttatccgag cagctttatc gccaagcagg
    18481 aaatcaaaag ctggccggta ttgggcaaga tggggcagaa cgcgggaacg gtgttcatca
    18541 accgcaattc gcggcgcgac atcgaaccga ttaaccgcgc cgtctgcgaa accttgcaac
    18601 gcggtcaaaa cgtcagtttt ttccccgaag cgcggacttc ctccggattg gggcttttgc
    18661 cgttcaaagc cgcgctgttc caatccgcca tcgatgcggg ggcaaaggtt ttggcggtcg
    18721 cgctgcgtta ttatgacgaa acgggaaaaa ggacggctcg tccctcatat gccgatgtcg
    18781 gtttgccgac ctgcctgtgg cgcatcgtgt ctatgaaaaa attgacgata aaagtcgatt
    18841 tcgtttgcgt ggcggatgcg gcggaaagcg aagaccgtta tgctttaaaa gataaaatcg
    18901 aagaaagcat ccgtgccgtt gtcgccgacg atgcggatat cgctgtctga aaccggttgt
    18961 cggaatgtgg cagtatgatt cgcttttgtg gat
//
LOCUS       DAWKJW010000019        17751 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.019, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000019 DAWKJW010000000
VERSION     DAWKJW010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17751)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17751)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17751
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.019"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..1184)
                     /locus_tag="WJJ54_000536"
     CDS             complement(<1..1184)
                     /locus_tag="WJJ54_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ7341434.1"
                     /translation="MHVLVIPSWYPQSERDVDGIFFQNQAQALQRKGIKTAVLAPMFR
                     YLRKEPASILTGPYGFAQYRQKGLDIYAWRSMYFFPRFPLIDIDRIRWVRVGLKAFKH
                     YIRENGLPDLIHAHRMNYAGILAQKISQKYGIPYVVTKHSSTITRGLIRPHQWQPMKN
                     AAAHAAARLAISRHFAHVLQHKYGCEWQYLPNILGGIFNRPFEQREKNNKPHFVFCTV
                     SHLRRLKGHDVLLTAFARALAQCPQLRLNIGGSGQEEQRLKQQAADLGITHAVTFLGA
                     LQPEAVLDLMKNSDAFVLASRTETFGVVYIEALSQGLPVIATRCGGAESIVSDGNGYL
                     VPVDDDDALADALIKMYEHHSDFEPARLRENCLNEFGENAVIGRLIGIFRQAIAEYGK
                     KIP"
     gene            1328..2032
                     /locus_tag="WJJ54_000537"
     CDS             1328..2032
                     /locus_tag="WJJ54_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248833.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEZ7341435.1"
                     /translation="MLRSILAASLLAVSFPAAAEALNYNIVEFSESAGVEVAQDTMSA
                     RFQVTAEGRDKNAVNAEFVKKFNNFTRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTG
                     WEERAEFKVEGRDFDELNRFIADVQADAALEYTDFYVSRERRNEVIDQVSKDAILRFK
                     ARADKLSGILGTSGYKIVKLNLGHIGSHIAGGGAAQAKMLRAMPMAASVNMEGEDSAA
                     PGVEEISISVNGTVQF"
     gene            complement(2096..2662)
                     /locus_tag="WJJ54_000538"
     CDS             complement(2096..2662)
                     /locus_tag="WJJ54_000538"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEZ7341436.1"
                     /translation="MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGKRIISYGTSSYG
                     YDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPR
                     NVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFF
                     ESDEVCETSYKDRNGKYMGQTGVTLPKA"
     gene            complement(2728..3144)
                     /locus_tag="WJJ54_000539"
     CDS             complement(2728..3144)
                     /locus_tag="WJJ54_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341437.1"
                     /translation="MLKHLAFLLPAMMFALPTSAAVLTSYQEPGCTYDGDVGKDGKPA
                     GKGTWRCQDGRNYTGSFKNGKFDGQGVYTVAANREIFIEPFNSDSTKFRNMVLSGTFK
                     KGLAHGRFTVSQNGETLFIMKCENGMIKEVKLPKNK"
     gene            complement(3206..4105)
                     /gene="rdgC"
                     /locus_tag="WJJ54_000540"
     CDS             complement(3206..4105)
                     /gene="rdgC"
                     /locus_tag="WJJ54_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HEZ7341438.1"
                     /translation="MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLDWFSEGF
                     TAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEK
                     QELKEQITDDLLPRAFTRSSRTEAVFNTRHSYLLVNNAASAKAENILTKLREALGGLE
                     ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVV
                     QHVKNGKTVTQLGLVWREQIAFILTQDFTLKRIQYLDVLQEEAESNGDDAASLAFASQ
                     ILMAESVSTMLEELVSYLGGWQD"
     gene            complement(4136..5593)
                     /gene="der"
                     /locus_tag="WJJ54_000541"
     CDS             complement(4136..5593)
                     /gene="der"
                     /locus_tag="WJJ54_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEZ7341439.1"
                     /translation="MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGH
                     GKVGSKPYLVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKI
                     IADRLRQSPRPVYLAVNKGEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL
                     ETFPEPEAEEADAKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDF
                     EREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDA
                     TIAGFALEAGRALVVAVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGI
                     DGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPV
                     IVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLR
                     RVSLSNRIEKREGRKEEKNRFKKKTKVSVKKQFSK"
     gene            complement(5747..6376)
                     /locus_tag="WJJ54_000542"
     CDS             complement(5747..6376)
                     /locus_tag="WJJ54_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HEZ7341440.1"
                     /translation="MAAHLEEQQELDNFKYFWKTTGKWLFAVLILAALGYLGYTVYQN
                     RAASQNQEAAAILAEIVEKAQNKAPQSEINAELTKLQQSYPHSISAAQATLMAAATEF
                     DAQRYDVAEGHLKWVLSNQKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFA
                     PLLMETKGDVYAAQGKSQEALKNYGQALEKMPQDSVGRELVQMKLDSLK"
     gene            complement(6377..7672)
                     /gene="hisS"
                     /locus_tag="WJJ54_000543"
     CDS             complement(6377..7672)
                     /gene="hisS"
                     /locus_tag="WJJ54_000543"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEZ7341441.1"
                     /translation="MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYG
                     YQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVE
                     HNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLW
                     EKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDT
                     KNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTV
                     FEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNA
                     APDVYAMHQGERADLQVMKYAQALRAQGFNVMQHSGYQSLKAQMKKADNSGARFALIV
                     AQDELANGTVTLKDMNGAHGQQTVAAEDLTHTLQQWKNA"
     gene            complement(7799..8341)
                     /locus_tag="WJJ54_000544"
     CDS             complement(7799..8341)
                     /locus_tag="WJJ54_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ7341442.1"
                     /translation="MQSWKARRDFNIVKQDLDFSCGAASVATLLNNFYGQTLTEEEVL
                     KKLDKEQMRASFEDMRRIMPDLGFEAKGYALSFEQLAQLKIPVIVYLKYRKDDHFSVL
                     RGIDGNTVLLADPSLGHVSMSRAQFLDAWQTREGNLAGKILAVVPKKAETISNKLFFT
                     HHPKRQTEFAVGQIRQARAE"
     gene            complement(8513..8704)
                     /locus_tag="WJJ54_000545"
     CDS             complement(8513..8704)
                     /locus_tag="WJJ54_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341443.1"
                     /translation="MLPTRSVSSLLLGEYLEFEENGTKIAAEIDSAWHFLGAACRISI
                     NGKYYAGNRIVWFAKKAES"
     gene            complement(8737..9273)
                     /locus_tag="WJJ54_000546"
     CDS             complement(8737..9273)
                     /locus_tag="WJJ54_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341444.1"
                     /translation="MEKIIDFKVRETNFNQAWRVIRAMQIDNISDEQVVIVRMSCYLK
                     KDEIFKNIERYGYQSSDIKKISPPFPLNILPVPKPYYFYLYDTHLNQIYDLAWSCNDF
                     LMFEIFILDRESIKYIDKDKLFKSGETLYSNFKSIKNQCKNYFFCGFDFDAPYFKSGV
                     SQVADYNFVPDAFSLFFI"
     gene            complement(9441..9636)
                     /locus_tag="WJJ54_000547"
                     /pseudo
     CDS             complement(9441..9636)
                     /locus_tag="WJJ54_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981156.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(10066..10431)
                     /locus_tag="WJJ54_000548"
     CDS             complement(10066..10431)
                     /locus_tag="WJJ54_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341445.1"
                     /translation="MEKPLLTPPFFLFEDVSLDIFQGLSELEKKIEPQDLMDDVYRAF
                     DSVGNILNFRIVEKEQKGFWVSTKIKTVVFDSADMSSDDLFLKCLQSSYKAYFETEPA
                     GLDKRQLMKTLIQKCGFSC"
     gene            complement(10413..10958)
                     /locus_tag="WJJ54_000549"
     CDS             complement(10413..10958)
                     /locus_tag="WJJ54_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341446.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQAFEDQVFHTRADAPMQLA
                     ELSQKEMKETEGAFLPLAILGGAAIGMWTQHGFSYATTGRPASVRDVAIAGGLGAIPG
                     GVGAAGKVVSFAKYGREIKIGNNMRIAPFGNRTGHPIGKFPHYHRRVTDNTGKTLPGQ
                     GIGRHRPWESKSTDRSWKNRF"
     gene            complement(11121..11393)
                     /locus_tag="WJJ54_000550"
     CDS             complement(11121..11393)
                     /locus_tag="WJJ54_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341447.1"
                     /translation="MFAVIFFSTLGCILAWIRDIPKIKSKKILARSLYIIGIINVIIS
                     YVLIKNILVSVSDGGGIKYVAIYLSNLFFWTVLMYVLVKRLSKKPS"
     gene            complement(11462..11896)
                     /locus_tag="WJJ54_000551"
     CDS             complement(11462..11896)
                     /locus_tag="WJJ54_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341448.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQAFEKYVFHTQADAPMQLA
                     ELSQKEMKETEGEWIPNAVGGIMGGVGGHFSYMASAIASGSYNREAHWTAIGGGALIG
                     AMNPINGGRALINGMRGVAVGTVAGGINGYAGSTGKNTDIRR"
     gene            complement(11939..12808)
                     /locus_tag="WJJ54_000552"
     CDS             complement(11939..12808)
                     /locus_tag="WJJ54_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="meta-pathway of phenol degradation family
                     protein"
                     /protein_id="HEZ7341449.1"
                     /translation="MKRIFLPALPAILPLSAYADLPLTIEDIMTDKGKWKLETSLTYL
                     NSENNRAELAALVYIQTGATSFIPIPTEIQENGSNTDMLVGTLGLRYGLTGNTDIYGS
                     GSYLWHEERKLDGNSKTRNKRMSDVSLGISHTFLKDDKNPALISFLESTVYEKSRNKA
                     SSGKSWLIGATTYKAIDPIVLSLTAAYRINGSKTLSDGIRYKSGNYLLLNPNISFAAN
                     DRISLTGGIQWLGRQPDRTDGKRESSRNTSTYAHFGAGFGFTKTTALNASARFNVSGQ
                     SSSELKFGVQHTF"
     gene            12972..13895
                     /locus_tag="WJJ54_000553"
     CDS             12972..13895
                     /locus_tag="WJJ54_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEZ7341450.1"
                     /translation="MKKRNNPLPLLNGVKPSYLVLPHEKQFYGLPLLHFLCIRFPFVG
                     ADDWRRRLNSGFVVGSDGAALDEHTLFEPGKVMFYYRETSSEDEPRIPFEEKILHIDE
                     HLIVVDKPHFLPVIPSGRFLRETLLTRLRLRPELQHLNVEDITPLHRLDKDTAGVMLL
                     SHNPATRGAYQTMFQNKTVWKTYEALAPTRTDLPYPLDVVSRLVRGEKFFTTQEAEGE
                     SNAHTTVELIENRGEFSLYRLTPHTGKKHQLRVHMMGLGMPLLNDALYPVPSEAGSED
                     YRKPLKLLAKKIAFADPLSGRERVFCSGFCL"
     gene            complement(13973..14614)
                     /locus_tag="WJJ54_000554"
     CDS             complement(13973..14614)
                     /locus_tag="WJJ54_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ7341451.1"
                     /translation="MLKPETIHISGPAGILETIHIPSEQVSARGVAVINHPNPLQGGT
                     NTNKVIQTAAKALSKLGFHCYLPNLRGVGNSEGTHDYGHGETQDCLAVIDYARAQHPE
                     APEFALSGFSFGGYVATFAAQARIPDLLLLIGAAVCHYTGRPEPSAVPNVAKTLMIHG
                     AEDEVVEIGKALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRFAPVCLNG"
     gene            complement(14669..15460)
                     /locus_tag="WJJ54_000555"
     CDS             complement(14669..15460)
                     /locus_tag="WJJ54_000555"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HEZ7341452.1"
                     /translation="MARHPYRRLRPAKSSFPEVGISEEGNIRSLHLGSDTIQSSMNLD
                     HPSELVLSYSRAMMGWLLFTDALPQHITQIGLGGGSFARWIDTYLPDTRQTAVDINPQ
                     VIAIARSLFELPFEGEKFEIIEADGAEYIKVFRHNTDVILVDGFDGEQIIDALVEEPF
                     FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLSVFEGRVLELPAESHGNVAVMAFQS
                     SPKEQNIDKLKKRADKLSNAYGLDFHRMLADLKASNPNNGKHFYL"
     gene            15626..15701
                     /locus_tag="WJJ54_000556"
     tRNA            15626..15701
                     /locus_tag="WJJ54_000556"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:15659..15661,aa:Thr,seq:tgt)
     gene            15736..15811
                     /locus_tag="WJJ54_000557"
     tRNA            15736..15811
                     /locus_tag="WJJ54_000557"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:15769..15771,aa:Thr,seq:tgt)
     gene            15953..16744
                     /gene="panB"
                     /locus_tag="WJJ54_000558"
     CDS             15953..16744
                     /gene="panB"
                     /locus_tag="WJJ54_000558"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEZ7341453.1"
                     /translation="MITVNTLQKMKAAGEKIAMLTAYESSFAALMDDAGVDVLLVGDS
                     LGMAVQGRQSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAEL
                     MAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA
                     LLNDAKAHDDAGAAVVLMECVPAELAKKVTETVSCPTIGIGAGADCDGQVLVMHDMLG
                     IFPGKTAKFVKNFMQGHDSVQAAVRAYVAEVKAKTFPAAEHIFAD"
     gene            16867..17703
                     /locus_tag="WJJ54_000559"
     CDS             16867..17703
                     /locus_tag="WJJ54_000559"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEZ7341454.1"
                     /translation="MQIIHTIRELRAWRKNAGKVAFVPTMGNLHEGHLALVREAKKRA
                     DSVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRY
                     NVEPPNLQNELCGKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTED
                     LNFDVEIVPVDTGRAEDGLALSSRNQYLSAAERDEAPRLYRELKAVAESLAQGSLDYA
                     GLERQAADHLTAAGWVVDYVEIRRADTLEVARAGDKKLVVLAAACLGTTRLIDNLEIK
                     LP"
BASE COUNT         4223 a         4106 c         4585 g         4837 t
ORIGIN      
        1 ggtattttct taccgtattc tgcgattgcc tgtcggaaaa tgccgatcaa cctgcctata
       61 acggcatttt cgccaaattc gttcagacag ttttctctaa gtcgggcagg ttcgaaatca
      121 gagtggtgtt catacatttt gatgagtgcg tcggcaaggg catcgtcgtc gtcaacagga
      181 accaaatatc cgttgccgtc tgaaacaata gattccgcac cgccgcagcg tgttgcaatg
      241 acgggcaatc cttgggacag tgcttcgata tagaccacgc cgaaggtttc ggtgcggctg
      301 gcaaggacaa atgcgtcgct gttcttcatc aaatccaaga ctgcttcggg ttgcagtgcg
      361 cccaaaaatg taacggcatg ggtaatgccc aagtctgccg cctgctgttt cagccgctgt
      421 tcttcctgtc cgctgccgcc gatgtttaga cgcagttgcg ggcattgtgc caacgcccgg
      481 gcaaaggcag tgagcaggac atcgtgtcct ttgagacggc gaaggtgcga gacggtgcag
      541 aacacgaaat gcggtttgtt gtttttttct ctttgttcaa acggtcggtt gaatattccg
      601 cccagtatgt tggggaggta ctgccattcg cagccgtatt tgtgttgcag gacgtgtgcg
      661 aaatggcggc tgatggcgag acgtgcggcg gcgtgcgccg ccgcattttt cataggctgc
      721 cattggtggg gacggatcag accgcgcgta atggtgctgc tgtgtttcgt gacgacatag
      781 gggatgccgt atttttggga aattttttgg gcgagtatgc cggcatagtt catgcggtgg
      841 gcgtgaatca ggtcgggcag cccgttttcg cggatgtagt gtttgaaggc tttcaaaccc
      901 acgcgcaccc agcggatgcg gtcgatgtcg attagcggaa aacgagggaa gaaatacatg
      961 ctgcgccatg catagatgtc caaacctttt tgccggtatt gggcaaaacc gtaagggccg
     1021 gtcaggatgc ttgccggttc tttgcgcaag tagcggaaca tcggtgcaag cacggcggtt
     1081 ttgatgcctt tgcgttggag ggcctgtgct tgattttgga aaaatattcc gtccacatcc
     1141 cgttcggatt gcggatacca tgaggggatg acgaggacgt gcaacggttc ggacataatg
     1201 tgattccgta tcggaaagat ggttattata aggcaggccg atcgaatatt taaattgttg
     1261 ccttacgcta acgcaattta gcataccgat atgctagatt ggcggtttta taagtgagga
     1321 tacggatatg ttgcgttcta ttttggcggc ttccctattg gcggtatctt ttccggcagc
     1381 ggctgaagca ttgaattaca atattgtcga attttctgaa tcggccggtg tagaggtggc
     1441 tcaggatacg atgtccgcac gtttccaagt gacggcggaa ggacgggaca aaaatgccgt
     1501 caatgccgag tttgttaaaa aattcaacaa tttcaccaga aaatcaaaaa atggtagctt
     1561 taaaaccgaa ttggtatcgc gcagtgcgat gccgcgctat caatatacca acggcagacg
     1621 cattcaaaca ggttgggagg agcgtgcgga atttaaggtc gaaggtaggg attttgatga
     1681 gttaaaccgt tttattgccg atgttcaggc agatgccgca ttggaatata cggattttta
     1741 tgtgtcgcgt gaacgccgaa acgaggttat cgatcaggtc agtaaagatg ctattttgcg
     1801 tttcaaggcg cgtgccgaca agttgtcggg catattgggt acgtccggtt ataaaatcgt
     1861 caaattaaat ttgggacaca tcggcagtca tatcgcgggt ggaggagctg ctcaggcaaa
     1921 aatgcttcgt gccatgccga tggcggcaag cgtcaatatg gagggtgagg attccgccgc
     1981 gccgggtgtg gaggaaatca gcatcagtgt caatggaacg gttcagttct aaccacggat
     2041 aaataggtag atgccgtctg aaaccggatg atacgattca gacggcattt atattttagg
     2101 ctttgggcag ggttacgccg gtttgcccca tatatttgcc gttgcggtct ttgtatgaag
     2161 tttcgcacac ttcgtcgctc tcgaagaaga ggacttgcgc tacgccttcg cctgcgtaga
     2221 ttttggcggg caggggggtg gtgttggaaa attcgagggt aacgtagcct tcccattccg
     2281 gttcgaacgg ggtaacgttg acgatgatgc cgcagcgggc gtaggtggat ttgcccaagc
     2341 atacggtcag gacgttgcgc gggatgcgga aatattcgac cgtgcgcgcc agtgcgaagg
     2401 aattgggcgg gatgatgcag cagtcgtctt caacggtaac gaagtttttg ggatcgaagt
     2461 ttttgggatc gacgatggtg ctgttgatgt tggtaaaaat tttaaattca ttggcgcagc
     2521 ggatatcgta gccgtagctg gacgtgccgt aggagatgat gcgtttgccg tcggcttctt
     2581 tgatttggtt cggctcgaag ggatcgatca tgccgaattc ttcgctcatg cggcgtatcc
     2641 atttgtcgga cttgatgctc ataatgtttt ccttgtttct tttgatgttt ggacaaagca
     2701 ttcggggatg ccgtctgaaa acggggctta tttgtttttg ggcagtttca cttctttaat
     2761 catgccgttt tcgcatttca taatgaagag ggtttcgccg ttttgcgaga cggtaaatct
     2821 gccgtgtgcc aagccttttt tgaatgtgcc cgagagtacc atgttgcgga atttggtact
     2881 gtcggaattg aacggttcga taaatatttc gcggttggcg gcaacggtat aaacgccttg
     2941 tccgtcgaac ttgccgtttt taaacgaacc ggtatagttg cgcccgtctt ggcagcgcca
     3001 tgtgcctttg ccggcgggtt taccgtcttt gccgacatcg ccgtcgtagg tgcagcctgg
     3061 ttcttgatag gaagtcagaa cggcggccga agtggggagg gcgaacatca tggcgggcag
     3121 taggaatgcg agatgtttaa gcataagggt tattccattg gattttggtt gacggtattt
     3181 tgtcgtgtaa aagccgtctg aaaaatcaat cttgccagcc gcccaaatag gaaaccagct
     3241 cttccaacat ggtgctgacg gattccgcca tcaggatttg cgaggcgaag gcaagactgg
     3301 cggcatcgtc accgttgctt tcggcttctt cctgcaatac gtcgaggtat tggatgcgct
     3361 tgagtgtgaa gtcttgagtg aggataaagg cgatttgttc gcgccaaacc aaaccgagct
     3421 gggttacggt tttgccgttt ttgacgtgtt gaaccacttc gtcggcggtt aaatcttgtt
     3481 tggatacttt gacgacggga acaatatcgc ccgtaccttt gagttcgcaa tcgctgtcta
     3541 attcaaaacc gccttcgcaa tgcccttgca acagccagcc ggtcatcagg gaagagggcg
     3601 attgtttggt attcggcagc gaggcttcca aaccgcccaa ggcttcgcgc agcttggtca
     3661 ggatgttttc tgctttggcg gaagccgcgt tattgacgag caggtagctg tggcgagtgt
     3721 taaacaccgc ttctgtacgg ctgctgcggg taaacgctcg gggcagcagg tcgtctgtaa
     3781 tttgctcttt aagctcttgt ttttctttgc gaccgacatt gcgggcttca ttgttttgga
     3841 tttccgctac cttctcttcc aaaatatcgc ggatgacgcc ggcaggcagg actttttcct
     3901 cttttttcag ggcgacgcgc aaggtaaagt cggcagggaa aacgagttcc ggggagaatg
     3961 aaaccggtgc ggtaaagcct tcgctgaacc agtctaagcc ttggcaatgg gtaaattcag
     4021 cttcagcaag tttgtcggca agtacgtccg cctcaggcag cttttctttg ttgagcggat
     4081 aaaaactaat ctgcttgaac cacataatgt ttcctattgt ttgaaatgtc gggaattatt
     4141 tgctgaattg ttttttcaca ctgactttgg ttttcttctt gaagcggttt ttctcttctt
     4201 tgcggccttc gcgtttctca atacggttgc tcaggctgac gcggcgcagc ggttttttct
     4261 tcggtttgtc ttccgcattt tcatacgggt tttccgaaac attgtattga atccgcaacg
     4321 gcgtgccttg caggttgaag gctttgcgga acgtttgggt cagatagcgc gtatagctgt
     4381 cggaaatcgc gtgcagcgaa ttgccgtgta ccacaattac gggagggttc atgccgcctt
     4441 ggtgggcata acgcattttc ggacgcacca agccggcacg cggcggttgc tgacgctcga
     4501 tcgcgctttg taatacgcgc gtgattttcg gcgtcggcat cttaatcatc gccgcgttgt
     4561 aggcagcctg aatgctgtca aacaaaccgt ctataccgcg ctctttcaat gcggaaataa
     4621 agtggaactt ggcaaaatcg aggaaataca gtttgcggtt gatatcgcgt ttcacttgct
     4681 cgcgacgctc ttcgctgatg ccgtcccatt tgttgacggc aaccaccaag gcgcggcctg
     4741 cttccaaagc aaaaccggca atcgtcgcat cttggtcggc gatgtcctgc tgcgcgtcca
     4801 ataccaaaac agcgacgttt gccgcttcaa ccgcctgcat cgctttgata acggagaatt
     4861 tttctactgc ttcatccact ttgccgcgac ggcgcacgcc tgcggtatcg atgatggtaa
     4921 acggtttgcc ttcgcgttcg aaatcgatgt ggatgctgtc gcgtgtcgtg cctgccatat
     4981 cgaaagcaat cacgcgctct tcgccgagga tggcgttaac cagtgtggat ttgccgacgt
     5041 tcggacggcc gatgacggca aagacgggat gttttgcatc ggcttcttcg gcttccggct
     5101 ctgggaaggt ttccaaaata tcttcaatca gataatacac gccatcgccg tgcgcacctg
     5161 aaataacata agggtcgccc aaagcaagtt cgtagaactc ggcggcaagc acggccctgt
     5221 tgccgccttc gcctttgttt accgccagat aaacagggcg cgggctttgg cgcaggcggt
     5281 cggcaatgat tttgtcttgc ggggtcaggc cggtacggcc gtccaccaaa aacacaaccg
     5341 catcagcttc atcgacagcc tgcaaggttt gttttgccat ttcgtgcaaa atgccgctgt
     5401 ccacaaccgg ctcgaaacct ccggtatcga tgaccaaata aggtttgctg ccgactttgc
     5461 cgtgtccgta atggcggtcg cgggtcaggc cgggcaggtc gtgtacgagt gcgtctttgg
     5521 tgcgcgtcaa acggttgaat aaagtagatt tgccgacgtt agggcggccg acaagcgcga
     5581 tggtgggttt cattattggg tctttctgtg tcaagtgccg ttcgggagaa ctgaacacga
     5641 gcaggtgtcc gttggacacg gtaaataggt tcttcacggc aagaggccat aaagagggag
     5701 ggtaaaatgc cgtctgataa ataatggacg gcatttcaga cggcatttat ttcagcgaat
     5761 caagtttcat ttgaaccaat tcgcgaccga cagaatcttg aggcattttt tctaaagcct
     5821 gtccgtagtt ttttaaggct tcctggcttt ttccctgtgc ggcatagaca tcgcctttgg
     5881 tttccatcag caggggggcg aagtccgctt caaccggcgt gtcgagcgcg gcaagtgcgg
     5941 catcgtattt tttttgttgc aacaacacaa cgcccagacg ctgtgccgcc aacgcttgaa
     6001 tcaggctgtc tttttggttg gacaacaccc atttcaaatg gccttcagca acatcgtaac
     6061 gctgcgcgtc aaattcggtt gccgccgcca tcagcgtggc ttgggcggcg gaaatggaat
     6121 gcgggtagct ttgttggagt ttggtcaatt cggcattgat ttcgctttgc ggggctttgt
     6181 tttgcgcctt ttctacgatt tctgccaata tggcagcggc ttcctgattt tgggaagccg
     6241 cacggttttg gtaaaccgtg tatcccaagt agccgagcgc cgccaaaatc agcacggcaa
     6301 acagccattt gcccgtggtt ttccaaaaat atttaaagtt gtctaactct tgttgttctt
     6361 cgagatgggc tgccatttat gcgttcttcc attgttgtaa agtatgggtt aaatcctcgg
     6421 cggcgacagt ttgctgaccg tgtgcgccgt tcatgtcttt gagcgtaacc gtaccgttcg
     6481 ccagttcgtc ttgcgcgaca atcagggcaa agcgcgcgcc gctgttgtcg gcttttttca
     6541 tttgcgcttt caggctttga tagccggaat gctgcattac attgaaacct tgcgcgcgca
     6601 aggcttgcgc gtatttcatc acctgcaagt ccgccctttc gccttggtgc attgcataga
     6661 catcaggcgc agcgttcact tccagcgagc cgtattcgct caccaaaagc agcagccgtt
     6721 cgatgcccat cgcaaagccg atggacggcg caggtttgcc gccaagttcc tcaatcaaac
     6781 catcgtaacg gccgccgccg cacacagttg cctgcgcgcc gagtttgtcg gtcgtccact
     6841 caaaaaccgt ctgattgtaa taatccaaac cgcgaaccaa gcgcggattt tcaatatatt
     6901 ggatacccaa accgtccaac atcgccttga agcgtgcata gtggttttgc gaagcctcgc
     6961 ccaaataatc caccaaacgc ggcgcggcgt tgcagatttc ctgcaaatca gggtttttcg
     7021 tatctaaaac acgcaaagga ttggttttca gacggcgttt gctgtcttcg tccaatttat
     7081 cttcatagcg tgtcaaatat tcaaccaacg ccgcacggtg tgccgctcgc tcctcacggt
     7141 tgcccaagct gttgatttcc aaagtcaggt attcgcggat acccaatttt tcccataagt
     7201 cggcagacat cgcgatgatt tccgcatcaa tatccggacc ttcaaaaccc aaagcttcga
     7261 taccgacctg atggaactga cgataacggc ctttttgcgg acgctcgcgg cggaacatcg
     7321 gccccatata ccacagcttt tgcgggctat tgtacagaag gttgtgttcg accaccgcac
     7381 gcagacaaga agccgtacct tcaggacgca ggctcaaact caaagaatcg tttgaatcgg
     7441 agaaggtgta catttccttg ccgaccacat cggtttcttc gccgatggag cggacaaaca
     7501 aaccggtttg ctcgacaatc ggcgtacgga tttgctgata accgtaagcg cgtgtccagc
     7561 ggccgaccgt atcttcaaac gcctgccaaa acgcagccgt cagtttgaaa tctttttgct
     7621 cgacaggcag aaggtcgttc atgcctttga cggattggat tttttgtgcc atttcaagta
     7681 agaatgctta aatcaaattg cgggcgatta tagcggattt ttaagggctt gtgaggatag
     7741 agatggtttg cggacgggta aaaatgccgt ctgaaacagt tttcagacgg catttgactt
     7801 actctgcacg tgcttgcctg atttgtccga ctgcaaactc tgtctgccgc ttgggatgat
     7861 gtgtgaaaaa caatttattt gaaattgtct cggctttttt cggcacgacc gccaaaatct
     7921 tacctgccaa atttccctca cgggtttgcc aagcatccaa aaactgcgcc ctgctcattg
     7981 aaacatgacc cagcgacggg tcggcaagca aaaccgtatt gccgtctatc ccgcgcaata
     8041 ccgagaaatg atcatccttg cggtatttca gatacacgat gacggggatt ttcaactgtg
     8101 cgagctgctc gaaagacagg gcatagcctt tcgcttcaaa acccaaatct ggcataatgc
     8161 gccgcatatc ctcaaacgac gcgcgcatct gctccttatc cagctttttc aacacttctt
     8221 cttccgtcag cgtttgcccg taaaaattgt tcaaaagcgt cgccaccgaa gccgccccac
     8281 aggaaaaatc caaatcctgc tttacaatat tgaaatcccg ccgcgctttc caactctgca
     8341 ctttgatttt tccgtaaaca acaggattat cgttaaacat cggtgcagca ttcaaacgat
     8401 aagataaaga aacgacaaca cacgccaaca gaaaaacata tttgaacttc atcatattgt
     8461 ccacataaag ggcagcctga aaatctttca ggctgccctt gtcaaattat tcctagcttt
     8521 cggctttttt ggcaaaccaa acaatccgat tacccgcata atactttcca tttattgaaa
     8581 tccgacaagc cgcgcccaaa aaatgccatg cactgtcgat ttccgcagca atctttgtac
     8641 cgttttcttc aaattccaaa tattcaccca ataataaact tgaaacagaa cgcgtgggca
     8701 gcaagtgccc accctacgct tattcaaata atttgattaa ataaagaata aagaaaatgc
     8761 atcaggaaca aaattataat ctgccacctg actcacaccg cttttaaagt aaggggcatc
     8821 aaaatcaaaa ccgcaaaaaa aataattttt gcattgattt ttaatagatt taaaattcga
     8881 atatagtgtt tctccagatt taaaaagttt atctttatct atatatttga tgctttccct
     8941 atccaaaata aatatttcaa acattaaaaa atcattacat gaccaagcca aatcataaat
     9001 ttgattcaaa tgggtatcat aaagataaaa ataataaggt ttgggaacag gtaaaatatt
     9061 taatggaaaa ggaggactaa ttttcttaat atctgatgac tgatatccat atctttctat
     9121 attcttaaaa atttcatctt tcttaagata acaagacatt ctgacaatca caacctgttc
     9181 atcggatata ttatctattt gcatggcgcg tataacacgc catgcctgat taaaattagt
     9241 ctcccttacc ttaaaatcta ttatcttttc caaagatgaa aatgcccctt atcttgagct
     9301 ctccagttag aacctggaag tttcgtacct cttaaatgtg tattaatatt tcttatagtt
     9361 tcattaaaat gccacgcgct gccgatttca acggtaattt tcgtaccgct ttcttcaaat
     9421 tccaggtatt cccccattag ctaacgcaaa gaagcagacg ccatttcggc ttcgttatga
     9481 taaacccgcc ttgatataga cttccgcccc tgtccgctcc aaattccaaa aattccgtac
     9541 tgaaatttcc atatcccgat attgtgcaga ccatgttttt tcgaaggttt tcataaaatt
     9601 tcctatacct gtccaatcgg cacatatcaa ttgcattatt acatctcaat acgataaata
     9661 tttcttaagt caaaatgcaa gcctgaccgt accttaactg tcaaaatttt attatttttt
     9721 attgatttta aaacaatttc tgcaaaattc tcttcgcttt ctctcttttt tagaagcaca
     9781 taagaaaaaa taaaacttcc ccgattaaat tcataaatat gtttcaacca ttcgcctcct
     9841 ctttctgtaa gacaagattc agtttcattc ttccttattg tataaatatt tccttcacaa
     9901 aatctgaaat aaatccatct tatccataat taaagaaaaa gtttcacctc gagattttgt
     9961 caacaattcg caaggttgcg atgttgcaat caaatagccg aaagacattt tttacctcat
    10021 acatggtcga aatcagtttc tgttagttca gaatccattt tttcgtcaac aactgaatcc
    10081 gcatttttga attaacgttt tcatcagctg ccgtttatct aaaccggcag gttcagtttc
    10141 aaaataagcc ttatatgaag actgtaagca tttcagaaaa agatcatcag aagacatatc
    10201 tgccgaatca aatacaactg ttttgatttt ggtacttacc caaaaccctt tttgctcttt
    10261 ttctactata cggaaattca gaatatttcc aaccgaatca aaagcacggt aaacatcatc
    10321 catcaaatcc tgcggctcta ttttcttttc caattccgac aatccttgaa atatatccaa
    10381 agacacatct tcaaatagaa aaaaaggagg agttagaagc ggtttttcca tgatctgtcc
    10441 gtagattttg attcccaagg gcgatgacga ccaattccct gtccaggcaa agtcttgccc
    10501 gtattatccg taactcgacg atgataatgg ggaaattttc caataggatg acctgttcta
    10561 ttaccgaaag gggctatccg catattattg ccgattttaa tctcacgtcc atatttagca
    10621 aaggaaacaa cctttcctgc ggcgcctaca ccaccaggaa ttgcgcctaa tccgccagca
    10681 atagcaacat ctctaacaga agctggtctg cctgtcgttg cataactaaa accatgctgt
    10741 gtccacatac caatggcagc accacccaag atagccaatg gaagaaacgc cccctctgtc
    10801 tccttcatct ccttttgaga aagctccgcc aactgcatcg gtgcatctgc ccgcgtgtgg
    10861 aacacttggt cttcaaatgc ctgattgtcc aagccgtttg ccattgcggg ggcaatcata
    10921 gacagcatca ttacggctgc ggtgatttgt tttttcataa taactccttt ggattacaag
    10981 gttggaaaat caaagccctg cttagaacgt atgttgcaca cccaatttca ataggtaaat
    11041 cagattgcaa atccagcaat ttgaatattg tcattgttcc gtgcaaaagg gatttttatt
    11101 gatgagttgt gtactgggtt tcagcttggc tttttagata atcttttcac aagaacatac
    11161 atcaatactg tccaaaaaaa aagatttgat aaatatattg caacatattt tattccacct
    11221 ccatccgaaa cagaaaccaa tatattttta attaatacat agctgattat tacatttatt
    11281 attcctataa tatataagga tcttgccaaa attttttttg attttatttt aggaatatct
    11341 cttatccatg ctaaaataca gcccaatgtc gaaaagaaaa taacagcaaa cactacctta
    11401 cctcctctca cttccaacca aaccgatagc aggtttggtt ggaagttggt ttatttatta
    11461 tttaacggcg aatgtcagtg ttcttacccg tagaacctgc ataaccattt atgccaccag
    11521 caacagtccc cactgctaca cctcgcatac cattaatcag tgctcttcct ccgttaatag
    11581 ggttcatcgc accaattaac gcaccacctc caattgctgt ccaatgtgcc tctcgattat
    11641 acgagccact agcaatagca ctagccatat agctgaaatg ccctccaact cctcccataa
    11701 tgcctccaac agcattagga atccactccc cctcagtctc cttcatctcc ttttgagaaa
    11761 gctcagccaa ctgcatcggc gcatctgcct gcgtgtggaa tacgtatttt tcaaatgcct
    11821 gattgtccaa tccgtttgcc attgcggggg caatcataga cagcatcatt acggctgcgg
    11881 taatttgttt tttcataata actcctttgg attacaaggt tggaaaatca aaacctgctt
    11941 aaaatgtatg ctgtacgcca aatttcagtt cggaactgct ttgccctgaa acgttgaaac
    12001 gtgcggatgc gtttaaagcc gtggttttgg tgaaaccgaa acctgcgccg aaatgggcgt
    12061 aggtggatgt gtttctggag gattcccgtt tgccgtccgt ccggtcgggc tgcctgccca
    12121 gccattggat gcctccggtc aggctgattc tgtcgttggc agcaaatgag atgttggggt
    12181 tgagcagcag gtagttgccc gatttgtagc ggatgccgtc tgaaagggtt ttgctgccgt
    12241 tgatacggta ggcggcggtg agggaaagga caatcggatc tatggctttg taggtggtgg
    12301 cgccgatgag ccaggatttt cccgacgagg ctttgttgcg cgatttttcg taaaccgtgc
    12361 tttcaagaaa gctgattagg gcggggtttt tgtcgtcttt aaggaaagtg tggctgatgc
    12421 cgagggatac gtcggacatc cgtttgttgc gggttttgct gttgccgtcg agtttgcgtt
    12481 cttcgtgcca cagatagctg ccgctgccgt aaatgtcggt attcccggtc agtccgtagc
    12541 gcaaaccgag cgtgccaacg agcatatcgg tattgctgcc gttttcttgg atttcggtcg
    12601 gaatggggat aaacgaggtt gcgccggttt ggatgtaaac cagtgcggca agttcggcgc
    12661 ggttgttttc gctattcagg taggtaaggg aagtttccag tttccatttg cccttgtcag
    12721 tcattatgtc ttcaatcgtc aagggcaggt cggcataagc ggataaaggc aggatggcgg
    12781 gcaaggcggg caaaaagatg cgcttcatat ttctcctatt gatattaatt cttatttaag
    12841 aatagtaatg aatatccgat aattttgtct aaataaattt ttaaatcata aaaaacaata
    12901 tgtttgtttt tatcaattat gttttgatat gccgtctgaa aagtttgtga aaaacggtta
    12961 caatccgccg catgaaaaaa cgcaacaatc ctcttccgct gttgaacggt gtcaaaccca
    13021 gttatttggt gctgccgcat gaaaagcagt tttacgggct gccgctgctg cattttctgt
    13081 gcatccgctt tccttttgtg ggcgcggacg attggcgcag gcggttgaac agcggttttg
    13141 tggtcggttc ggatggtgcg gcgttggacg aacatacttt gttcgagccg ggtaaggtga
    13201 tgttttatta tcgggaaacc agcagtgagg atgagccgcg tattccgttt gaagaaaaga
    13261 ttttgcatat tgatgagcat ttgattgtgg tggacaagcc gcattttctg cccgtcatcc
    13321 ccagcgggcg ttttttaagg gaaacgctgc tcacacgtct gcgcctgcgt cccgaattgc
    13381 agcatttgaa tgttgaagac attacgccgc tgcaccgctt ggacaaggat acggcaggcg
    13441 tgatgctgct gtcgcacaat cctgccacgc ggggggctta tcagacgatg tttcaaaaca
    13501 aaacggtatg gaaaacgtat gaggcgcttg ccccgacaag gacggatttg ccgtatccgc
    13561 ttgatgtggt ttcgcgtttg gtaaggggtg aaaaattttt tacgacgcaa gaggcggaag
    13621 gcgaatcaaa tgcacatacg acggttgaac taattgaaaa caggggggaa ttcagccttt
    13681 accgccttac gccgcatacc ggcaagaaac accagttgcg cgtacacatg atgggcttgg
    13741 gtatgccgtt attgaatgac gcgctctatc ccgtgccgtc tgaagcgggc agcgaggatt
    13801 atcggaaacc tttgaagcta ttggcaaaaa agattgcgtt tgcagatcct ttgtcgggtc
    13861 gggaaagggt gttttgcagc ggattttgcc tataatgaga gggaacgcaa acccgtatcg
    13921 gcggatgccg ccgatacggg ttttacatta tcgatgccgt ctgaaagggg ttttatccgt
    13981 tcaggcatac gggcgcgaag cggaggatgg tgtcgcgcag gacgatgagt ttgccgtgaa
    14041 agaaatgcgt ggaaccggcg atggtaatga cgggcaaatc ttgcggttcc gcccatttca
    14101 gtgctttccc gatttcgacg acttcgtctt ccgcgccgtg tatcatcagc gttttggcaa
    14161 cattgggaac ggcggacggc tcggggcggc cggtatagtg gcagactgcc gcgccgatga
    14221 gcagtaacag gtcgggtatg cgcgcttgtg cggcaaatgt ggcgacatag ccgccgaagg
    14281 agaagccgga taaggcaaat tcgggggctt cgggatgttg ggcgcgggca tagtcgatga
    14341 cggcgaggca gtcttgcgtt tcgccgtgtc cgtaatcgtg tgtgccttcg ctattgccta
    14401 cgccgcgaag gttgggcagg tagcagtgga agccgagttt gcttaaggct ttggcggcag
    14461 tttggatgac tttgttggtg tttgtcccgc cttgtagggg gttgggatga ttgatgacgg
    14521 caacaccgcg tgccgatact tgttcggacg ggatatggat ggtttctaaa atgccggcag
    14581 gaccggatat gtgtatggtt tcgggtttca gcataatgat ttcctcttga ttttccgcat
    14641 gttccaatgc ggtcatgaag atagttgctt aaaggtagaa atgcttgccg ttgttggggt
    14701 tggatgcttt caggtcggcg agcatgcggt ggaagtccaa tccgtatgcg ttgctcagtt
    14761 tgtcggcacg ttttttgagt ttgtctatgt tttgctcttt ggggctgctt tggaaggcca
    14821 ttaccgcgac attgccgtgg ctttcggcag gaagttccaa gacgcgccct tcaaaaacgc
    14881 tcaacaaccg ttcgatgaag cgttggtagc gtttgtcgcc gctccaccag ttggttacga
    14941 atatgccgtc tgaagagagt gcgtttcggc agtctcggaa aaacggttct tcaaccagcg
    15001 catcgatgat ttgttcgccg tcgaacccgt ccaccaaaat cacatcggtg ttgtggcgga
    15061 agactttgat atattctgca ccgtctgctt cgataatttc aaatttctcg ccctcgaaag
    15121 gcaactcgaa caggctgcgg gcaatggcga tgacctgcgg gttgatgtcc acggcggttt
    15181 ggcgcgtgtc gggcaggtag gtgtctatcc agcgtgcaaa cgaaccgccg cccaagccga
    15241 tttgggtgat atgctgcgga agagcgtcgg taaacagcag ccatcccatc atggcacggc
    15301 tgtaagagag taccagctcg gacgggtggt cgaggttcat tgagctttgg atggtgtcgc
    15361 tgcccaagtg aagcgaacgg atattgcctt cttcggaaat gccgacttcg ggaaagctgg
    15421 attttgcagg acgcaggcgg cggtagggat gtcttgccat cggtgtgaac ggtcggtttg
    15481 aaaggcagat attttatcag aatgccgatg gttgtcctgc ttcaaattaa tttcttttca
    15541 aataaattac ttattcggat ttgccggggc tttcggataa attccttgcc aaggtgcggc
    15601 attgcctgca taattcgctt tctttgccgg tatagctcag ttggtagagc acctgacttg
    15661 taatcagggg gtcccgagtt cgactcttgg tgccggcacc atccttgctt atggtgcggt
    15721 aatacaatcc aatatgccgg tatagctcag ttggtagagc acctgacttg taatcagggg
    15781 gtcccgagtt cgactcttgg tgccggcacc agatttgaca gcccgattgt gtaaaacagt
    15841 cgggctgttt tgcatttgcg gcacggtcgg tggcagggct gcgggcattt cactataata
    15901 gcccgtttca aactgaaaag gccgtctgaa aagggcgggg taacaatatc tgatgattac
    15961 tgtgaacaca ctgcaaaaaa tgaaggcggc gggcgagaaa atcgctatgc tgaccgctta
    16021 cgaatccagt tttgccgcgc tgatggacga tgccggcgtg gatgtgctgc tggttgggga
    16081 ttctttggga atggcggttc aagggcggca gtcgacgctg ccggtcagcc tgcgcgatat
    16141 gtgctatcac accgaatgtg tggcacgcgg tgcaaaaaat gcgatgattg tcagcgattt
    16201 gccgtttggt gcatatcagc agagtaagga gcaggcgttt gccgccgccg ccgaactgat
    16261 ggctgccggc gcgcatatgg ttaaactcga aggcggcgtg tggatggcgg aaacgactga
    16321 atttttgcaa atgcgcggta ttccggtttg tgcgcacatc ggtctgaccc cgcaatccgt
    16381 gtttgccttc ggcggatata aagttcaggg gcgcggcggc aaggcgcagg cgttgcttaa
    16441 cgatgccaag gcgcatgacg atgcgggggc ggcggtcgtg ctgatggagt gcgtaccggc
    16501 ggaactggca aaaaaggtaa ctgaaactgt ttcctgtccg accatcggca tcggcgcggg
    16561 tgcggattgc gacgggcagg ttttggtgat gcacgatatg ctcggcattt tcccgggtaa
    16621 gacggcgaaa ttcgtcaaaa actttatgca ggggcatgat agtgttcaag cggcggttcg
    16681 ggcgtatgtt gccgaagtca aagccaaaac tttccctgct gcggaacata tttttgcaga
    16741 ttgaacggtt tacatgcagc atgccgtctg aaagccgttt cagacggcat tttgttttgc
    16801 cgtgcgcggc gcgtataatc ggcgcgtttt gtcgggcagg aagcccgaag gataaggatt
    16861 accgttatgc aaatcataca taccattcga gaactgcgcg cgtggcgtaa aaatgcggga
    16921 aaggtggcat ttgtgccgac catgggcaat ctgcatgaag ggcatcttgc gcttgtgcgt
    16981 gaggcgaaaa aacgcgcgga cagtgtcgtg gtcagcattt tcgtcaaccg cctgcaattc
    17041 ggtcagggcg aggatttcga caaatatccg cgtactttgc aacaggatgc ggacaagctg
    17101 gaagccgagg gtgttgccgt tgttttcgcg cccgatgaga aagaactcta tccgaacgtg
    17161 gaacagcgtt acaacgtcga accgcccaat ctgcaaaatg agttgtgcgg caagtttcgt
    17221 ccgggacatt tccgcggggt ggcaacggta gtgtccaagc tgttcaatat tgtcgcgccg
    17281 gatgttgcct gtttcggcaa aaaagactat cagcagcttg ccgtgattaa aggtttgacc
    17341 gaggatttga attttgatgt tgaaatagtg cctgtcgata cggggcgcgc ggaagacggg
    17401 ttggcactgt cgagccgcaa ccagtatttg agtgcggcgg aacgcgacga agcaccgcgc
    17461 ctgtaccgcg aattaaaggc tgttgccgaa tccttggcgc agggcagttt ggattatgca
    17521 ggtttggagc ggcaggctgc cgaccatttg accgctgcgg gctgggtggt cgattatgtc
    17581 gaaatccgcc gcgccgatac gctcgaagtg gcgcgggcgg gagataagaa actggtggtc
    17641 ttggccgccg cctgtctggg gacgacgcgc ctgattgaca atttggaaat aaaactccct
    17701 taaaccgcaa gcgtcgggaa tgccgtctga agcggatttg cgtttcagac g
//
LOCUS       DAWKJW010000020        17330 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.020, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000020 DAWKJW010000000
VERSION     DAWKJW010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17330)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17330)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17330
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.020"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..174)
                     /locus_tag="WJJ54_000560"
     CDS             complement(<1..174)
                     /locus_tag="WJJ54_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341455.1"
                     /translation="MPSERLSDGIFPCVLNRIHETPDAFGGNVGCRAMFGGDQRTKYA
                     GKGLMPSEGSDGIG"
     gene            complement(192..749)
                     /locus_tag="WJJ54_000561"
     CDS             complement(192..749)
                     /locus_tag="WJJ54_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEZ7341456.1"
                     /translation="MDALKLLTNRRSSKKLKHPAPDAAELEQIFQAATQVPDHGNMRP
                     FRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFAPNRDVP
                     KPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGL
                     MMVGTPTEEVHKPKNTDLEAFVSHW"
     gene            complement(825..2459)
                     /locus_tag="WJJ54_000562"
     CDS             complement(825..2459)
                     /locus_tag="WJJ54_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase LptA"
                     /protein_id="HEZ7341457.1"
                     /translation="MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGT
                     GADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKS
                     MLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKEFLTRLVLAA
                     VSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLD
                     MAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSC
                     GTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKV
                     PNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYT
                     EAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYV
                     SDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENE
                     YSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR"
     gene            complement(2533..2862)
                     /locus_tag="WJJ54_000563"
     CDS             complement(2533..2862)
                     /locus_tag="WJJ54_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341458.1"
                     /translation="MSRCCLKRLQTASAVSAFSGGVLEVVRLCCRRLSVLFNPSVMLF
                     VPDCPVGGAAGFFQYEMLCPFFWQGRLQTGSNLAYDVFMSAGRLNGGRNPPHSRRFLA
                     LLCSVAL"
     gene            complement(2862..3968)
                     /gene="serC"
                     /locus_tag="WJJ54_000564"
     CDS             complement(2862..3968)
                     /gene="serC"
                     /locus_tag="WJJ54_000564"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEZ7341459.1"
                     /translation="MSLYPIYNFSAGPAVLPEAVLETARQEMLDYNGTGFPVMAMSHR
                     SEMFLSILHHAEQDLRQLLKVPDNYKILFLQGGATTQFNMAAMNLAHGFRTADAVVTG
                     NWSRIAYEQMSRLTDTEIRLAAHGGEQFDYLDLPPVETWDVAPDSAFVHFAVNETVNG
                     LQYREVPRLSEGMPPLVCDMSSEILSREFDVADYGLIYAGAQKNIGPAGVTVVIVRED
                     LLERCPNDIPDVFNYRSHLNREGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRL
                     KAQTLYETIDGSGGFYINRIRPNARSKMNVVFQTGDEELDRRFVLEAELQGLCLLKGY
                     KTVGGMRASIYNAMPLEGVRALADFMRDFQRRYG"
     gene            4333..4764
                     /gene="rimP"
                     /locus_tag="WJJ54_000565"
     CDS             4333..4764
                     /gene="rimP"
                     /locus_tag="WJJ54_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEZ7341460.1"
                     /translation="MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKESGITVEDC
                     ATVSNHLSRVFMVEDIDYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQK
                     NFIGKIEGCENDTVTVSFDGKTVQIELGNIDKARLRPEFKF"
     gene            4792..6294
                     /gene="nusA"
                     /locus_tag="WJJ54_000566"
     CDS             4792..6294
                     /gene="nusA"
                     /locus_tag="WJJ54_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HEZ7341461.1"
                     /translation="MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHM
                     DVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQL
                     PNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVV
                     AGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNTGRKQVILSRTSGDFLVKLYA
                     NEVPEIADGMLEIRAVARDPGQRAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSG
                     ERIDVVLWSPEPAQFVMSALSPAEVSRIVIDEDKHAVDVIVAEDQLALAIGRGGQNVR
                     LASDLTGWQLNIMTSAEADERNAAEDAAIRRLFMDHLNVDEETADVLVQEGFATLEEV
                     AYVPAAELLAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGIDADM
                     LRSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK"
     gene            6306..9194
                     /gene="infB"
                     /locus_tag="WJJ54_000567"
     CDS             6306..9194
                     /gene="infB"
                     /locus_tag="WJJ54_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEZ7341462.1"
                     /translation="MSNTTVEQFAAELKRPVEDLLKQLKEAGVSKNSGSDSLTLDDKQ
                     LLNAYLTKKNGSNGGTISIRRTKTEVSTVDGVKVETRKRGRTVNIPSAEELAAQVKAA
                     QTQAAPVRPEQTAEDAAKARAEAAARAEARAKAEAEAAKLKAAKAGNKAKPAAQKPTE
                     AKAETAPVAAETKPAEESKAEKAQADKMPSEKPAESKEKAAKPKHERNGKGKDAKKPA
                     KPAAPAVPQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAMKQQAEQQ
                     AKAAQEAKTGRQRPAKPAEKQQAAAPAVENKPVNPAKAKKEDRRNRDDEGQGRNAKGK
                     GGKGGRDRNNARNGDDERVRGGKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVAD
                     LAHKMAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLD
                     EGAEAVEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVET
                     PRGVITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPI
                     VVAVNKIDKDTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLE
                     AEVLELTAPVDAPAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAM
                     VDENGKSITEAGPSIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLA
                     KQQAAKLENMFNNMGETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGV
                     GGITESDVNLAIASGAFIIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMS
                     GMLSPEEKEQVTGTVEIRQVISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGE
                     LASLKRYKDDVKEVRMGFECGLMLKGYNEIMEGDQLECFDIVEVARSL"
     gene            complement(9406..10800)
                     /locus_tag="WJJ54_000568"
     CDS             complement(9406..10800)
                     /locus_tag="WJJ54_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase/DUF3482 domain-containing protein"
                     /protein_id="HEZ7341463.1"
                     /translation="MNKQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVKNAPSTTRHV
                     EEAAISDGADMLVFLYDTPGLEDAGGVLEWLETHTDTRSDGIERLQQFLGSHGAHHDF
                     NQEAKVLRQVLQSDMAMYVIDAREPVLDKYRDELTILSWCAKPVMPVFNFTGGQLPES
                     WTTMLARRNLHVFAGFDTVAFDFEGELRLWENLATMLPERSTLDRLTAMRRREWQRLD
                     GEARREIADFLLDAAAFRQEVDENEDTATVLQTMQAEIRQLERQMQQRLFALYRFYHS
                     EIDGGDWMPQAFRQDPFDSELLKQYGIRTGTGAATGALIGLGLDIATLGGSLGLGTAI
                     GGFLGGILPNTRTISDKLSGRQTLHTDPETLTLLAARALDLLHVLQTRGHAAQSDIEL
                     HSRKAPWDAARLPPELNKARSHWKWSSLNTYRPETSRTERAGYVEKLQIRLSGKYSEL
                     NLNQDKAASRRQYK"
     gene            complement(10874..12214)
                     /locus_tag="WJJ54_000569"
     CDS             complement(10874..12214)
                     /locus_tag="WJJ54_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HEZ7341464.1"
                     /translation="MLNPSRKLVELVRILEEGGFIFSGDPVQATEALRRVDGSTEEKI
                     IRRAEMIDRNRMLRETLERVRAGSFWLWVAAATFAFFTGFSSTYLLMDNQGLNFFLVL
                     AGVLGMNTLMLAVWLATLFLRVKVGRFFSSPATWFRGRDPVNQAVLRLYADEWRQPSV
                     RWKIGATSHSLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLSNAASVRLVEMLAWLPS
                     KLGFPVPDARAVVEGRLNGNIADAQAWSGLLVGSIACYGILPRFLAWVVCKILLKTSK
                     NGLDLEKPYYQAVIRRWQTQIVDADTRRETVSAVSPKIVLNDAPKWAVMLETEWQDGA
                     WFEGRLAQEWLDKGVATNREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLS
                     EAAQGGAVVQLLAEQGLSDDLSEKLGHWRNALAECGAAWLEPDRAAQEGRLKDQ"
     gene            12357..12983
                     /locus_tag="WJJ54_000570"
     CDS             12357..12983
                     /locus_tag="WJJ54_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEZ7341465.1"
                     /translation="MYTGERFNTYSHLSGLILAAAGLVLMLLKTIGHGDGYRIFSVSV
                     YGISLLLLYLSSSLYHGIAAGKLKSILKKTDHCMIYVLIAGSYTPFALVSLRNGPGWT
                     VFSLSWLLAAAGIAQELTIGRKSEKRLLSIVIYVVMGWMVLAVMKSLTASLPSAGLAW
                     LAAGGMLYSVGIYWFVNDEKIRHGHGIWHLFVLGGSITQFVSVYGYVI"
     gene            complement(13047..14465)
                     /locus_tag="WJJ54_000571"
     CDS             complement(13047..14465)
                     /locus_tag="WJJ54_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ7341466.1"
                     /translation="MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKL
                     GAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFW
                     MWVSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
                     SIALIIALGFIGNATQANSIASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIA
                     QFVVPFMAVVYILCAVVILFEFSDHIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRF
                     GVARGLFSNEAGMGSTPHAHATADVKHPVQQGMAAFVGVFIDTILVCTATALIILLTD
                     ANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFAFTTIIGWYYFGESNIRFLFRGR
                     HLGIYRALVLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYL
                     AQKKAGRDLSYPYEFHEFHDKG"
     gene            14792..15520
                     /locus_tag="WJJ54_000572"
     CDS             14792..15520
                     /locus_tag="WJJ54_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEZ7341467.1"
                     /translation="MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPG
                     SNPRLRLALEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCL
                     TDNKTRTVADVRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGA
                     EDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQ
                     KLIDALEDLDDVQDVYTSAVLNLD"
     gene            complement(15579..16067)
                     /locus_tag="WJJ54_000573"
     CDS             complement(15579..16067)
                     /locus_tag="WJJ54_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEZ7341468.1"
                     /translation="MTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLC
                     VLATALCTAIVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCG
                     APWTFRLKGWPLFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWAR
                     AK"
     gene            complement(16826..17290)
                     /locus_tag="WJJ54_000574"
     CDS             complement(16826..17290)
                     /locus_tag="WJJ54_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HEZ7341469.1"
                     /translation="MKELDKIDFRILKILQQNARIPMTELAEKVGLSTTPVTERVRRL
                     EREHYISGYHAHLNPHLLGKPLLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHLVS
                     GEYDYLIKVRLPDMSAYRDMLGNILLQLPAASESRSYVVMEEVKENPVLDLD"
BASE COUNT         4565 a         4845 c         4353 g         3567 t
ORIGIN      
        1 accgatgccg tctgaacctt cagacggcat gagacctttg cctgcgtact tggtacgctg
       61 gtcgcctccg aacatggcgc gacacccgac atttccgccg aacgcatcgg gcgtttcatg
      121 aatccggttt aaaacgcatg gaaaaatgcc gtctgaaagc ctttcagacg gcatttcgct
      181 tgagattccg tttaccaatg gctgacaaac gcttccaaat cggtattctt gggcttatgc
      241 acttcctctg tcggcgtgcc gaccatcatc agcccgatga ttttatcctt atccgcacat
      301 ccgaaagcct cacgcaacag ggggctgttg acccacatcc ccgtaatcca gacattgtcg
      361 aaaccttgcg ccgttgccgc cagttgcagc gcatacgccg cacaacccgc cgtcagcatc
      421 tgctcccatt ccggtttcgg cttaggcaca tcgcggttcg gcgcaaacgt tacaccgata
      481 accatcggcg ccatattgcc cactttttcc gcctttttca tcgcatcgtc gccgaaattc
      541 aattcggcaa ccgtttgctt taacacatcg cgaaaacgtt gcaatcctac ctcgccttga
      601 atcacggtaa aacggaaggg gcgcatattg ccgtgatcgg gaacttgggt tgccgcctga
      661 aatatttgtt ccaactccgc cgcatcgggg gcggggtgct tcagcttttt ggaagatcgg
      721 cggttcgtca ataattttaa agcatccata tcgttatact ccggtcatcg gtcgggtgtt
      781 cggacacata tgccgtccga aggcttcaga cggcatatcc ggcatcagcg cggacggcgg
      841 caggctgcca atatatccat ttccttccga taggtttggc tgttggaaat gtccatcagc
      901 cccaataccg tgctgaaata gtggtcgtgc gaatattcgt tttccgccgc tttttgtttg
      961 aggcattgga aatctatgcc cccgtgttgg cggaaggctt tggaaaacca cataaccatc
     1021 gggatatgcg tctgcccgga aggcgcgatg gcgtaaggcg cggcgtgcag gtacatcccg
     1081 ttttcgccca aactttcgcc gtggtcggaa acataatgca ccacgctttc caaatcgtcg
     1141 cggttttcaa gtttgcggat aaccttgtcg ataaactggt ccacatacaa aaccgtattg
     1201 tcgtaagtgt tgaccagcgt ggcgcgggtg catttgttga tttcgttggt gtcgcaggtc
     1261 ggcgtgaatt tgcgttcggc ttcggtatag cgttcgtaat acgtcggccc gtggctgccg
     1321 atggtatgca ggattaaaac cgcgtcttta tcgtttttgt tgaggacttc gtcgaactta
     1381 gtcagcagga tattgtcgag gcactcgccg ttgcggcagt attcgggcag gttgagcgag
     1441 gtaacgtcgg tattcggcac tttgccgcac acgcccttgc agccggaatc gttttccaac
     1501 caagtaactt ccacgccggc gcgctgcacg atgtccagca ggttgtcttg gtgttcggct
     1561 ttgatttcgt cataatccgt gcggtcgaag gttgagaaca tacacggcag ggagtgcgcg
     1621 gtcgatgtgc cgcagcttct gacctgcggg aaattgacaa tttcatcgcc gcgcgcggca
     1681 agcagcggcg tagtttggcg gctgtaaccg ttcaaacccc agttggcggc acgcgtggtc
     1741 tcgcccacga ccagcaccac gaaacggcgc aggctgccgg ccggccggtt ttgcacgacc
     1801 gccatatcca attgcgtata aggaatattg gaacgcttcc aatctttgta tttcgacacg
     1861 cccgcgccga tgaaattaga cggcacaatc agatgggtta ctgatttatt gttgcggaaa
     1921 aacgaggcgt aatcctgata ttgcaacatt gcgatgccca acgcgcacaa aaaggaaacg
     1981 gcggcaagca caaggcgcgt caaaaactcc ttataccaaa cgcggtattt aaccttgacg
     2041 gcgatatacg ccagcgcggg caatacgccc aaacatacaa tccacagcac atagcccggc
     2101 gtaatcaggc gcgcgctttc ggcagccgta gtttgcaaga cattattcaa catcgacttg
     2161 ttgaaataga tattgaaaaa tatttcttgg taagacaccg ccgcactgat aaccaatatc
     2221 aacggaatca ataccttatg cacgaaaggc agggcaatga cgtgaaaaac gaaattactt
     2281 aaaaaaaaca gcaccaccgg catcgtatag aggaagatat ccgccccggt gccgttaaaa
     2341 ggatgaagct cgacaacttt ggcaaaaaag gcgtaattca ataccagcga ggaatacagg
     2401 gaaaggaagg caatcagcgc ggaagagccg agcttcggcc tcaggttcgg ttttatcatt
     2461 tggaatgtgt cggataaggg ttggaaaagg catccggcat ttggaatccg gattattgaa
     2521 aaagattctt aattataagg caacggagca aagcagggca agaaaacggc ggctgtgcgg
     2581 ggggttccgc ccgccattca aacgtccggc agacataaaa acatcgtaag caagattcga
     2641 accggtctgc aaccgcccct gccagaaaaa cgggcaaagc atttcatatt ggaaaaaccc
     2701 ggccgcgccg ccgacgggac agtccggcac aaacagcatc acgctcggat tgaaaaggac
     2761 ggatagccgc cggcagcaca atcttaccac ctccaaaacg ccgccggaga acgccgaaac
     2821 agccgatgcc gtctgaagcc gcttcagaca acatcgggac atcaaccgta acgccgttgg
     2881 aaatcgcgca taaaatccgc caaagcccgc acgccttcaa gcggcatcgc attataaatg
     2941 ctggcacgca taccgccgac ggttttatag cccttaagca ggcacaagcc ctgcaattcg
     3001 gcttccagca caaaacggcg gtcaagctcc tcatcccccg tttggaacac gacattcatt
     3061 ttagaacgcg cattcggacg gatacggttg atatagaaac cgccgctgcc gtctatcgtc
     3121 tcatacaagg tttgcgcctt cagccgattg accgcttcaa tttttttcac accgccctgc
     3181 gcctgcagcc agcggaacac cagccccgac atataaatcg cgtaagttga cggcgtgttg
     3241 tacatacctt cgcggttcaa atgcgaacgg tagttgaaca catcgggaat atcgttcgga
     3301 caacgctcga gcaaatcctc acgcacaatc accaccgtaa cccctgccgg cccgatgttt
     3361 ttctgtgcgc ctgcgtaaat cagtccgtag tcggcaacat caaactcgcg cgacaaaatc
     3421 tcgctggaca tatcgcacac cagcggcggc atgccttctg aaaggcgcgg cacttcacgg
     3481 tattgcagcc cgttgaccgt ttcattgacg gcaaaatgga caaacgccga atcgggtgca
     3541 acatcccacg tttccacagg cggcaggtcg agatagtcga actgctcgcc gccatgcgcc
     3601 gccaaacgga tttccgtatc ggtcaaacgg ctcatctgtt cataagcgat acggctccag
     3661 ttgcccgtta ccaccgcgtc ggcagtgcgg aaaccgtgtg ccagattcat ggctgccata
     3721 ttaaattggg ttgttgctcc accctgcaga aacaatatct tatagttgtc aggcactttc
     3781 aaaagctgcc tcaaatcctg ttccgcatga tgcaggatgc tcaaaaacat ttccgaacgg
     3841 tggctcatcg ccatcacagg aaaacccgta ccgttgtagt ccaacatttc ctgccgcgcc
     3901 gtttccaaca cggcttcggg caatacggca gggccggcgg aaaaattgta aatcggataa
     3961 agagacataa tgcagccttg attctgaaca ataacccgcc cgattttagg cttgcagcag
     4021 gctttgtgca aggatgggaa atacctgtcc tccgccccgc ttcatgccgc ccgaacacgg
     4081 aaaacaacat caatatattg atttacaaat ataaaaatca tgctagcgac aaatagatac
     4141 atttgttttg tcaacaatat tcacgatttc ccattacaaa cctcccttac acccgctttt
     4201 ttccgtccca aaaacacaaa ataaatcaac actttcattt ctccgcaaaa gcggttataa
     4261 tcacgccgat ttttcaactt tgacgaaaaa tggccacggg gccatttttt tattatgtac
     4321 atagggagca gcatggatat ccaaaccatc ctcgaaaaaa ccctgcccgg cctgggctac
     4381 gaactggtcg atttcgaact gaccgcgcaa ggaacattgc gcgtgttcat cgacaaagaa
     4441 agcggcatta ccgtcgaaga ctgcgcaacc gtcagcaacc acttgagccg cgtcttcatg
     4501 gttgaagaca tcgactacaa aaacctggaa atttccagcc ccggactcga ccgccccttg
     4561 aaaaaagccg ccgacttcgt gcgctttgcc ggtcagaatg ccaaaatcaa aacccgcctg
     4621 ccgatagacg gtcagaaaaa ctttatcggt aaaatcgaag gctgcgaaaa cgataccgtt
     4681 accgtatcct tcgacggcaa aaccgtacaa atcgaattgg gcaacatcga caaagcccgt
     4741 ctgcgccccg aattcaaatt ctaaaacaca acaatattgg agatgttcaa aatgagtcgt
     4801 gaaatgttac agctggcaga agcactggca agcgaaaaaa acgttgatgc ggaagtcgtc
     4861 ttccaagcac tggaattcgc cctgtctacc gccgccaaga aaaaggcaga ccgcgaacac
     4921 atggacgtgc gcgtccaaat caaccgcgac accggcgaat accaaacctt ccgccgctgg
     4981 ctgattgtcg ccgatgaaga ctatacctat cccgatgtcg aaaaaaccat cgaggaaatc
     5041 caagaggaaa ttcccggcac taccatccaa atcggcgaat actacgaaga gcagctgccc
     5101 aacgaaggct tcggccgcca agccgcgcaa accgccaaac aaatcatcct gcaacgcatc
     5161 cgcgatgccg agcgcgagca gaatctgaac gagtttctcg ccgtcaaaga agacatcgtg
     5221 tctggcacgg tcaaacgcgt cgaacgccac ggcatcatcg tcgaagtcgt tgccggcaaa
     5281 ctggacgcgc tgattccgcg cgaccaaatg attccgcgcg aaaacttccg cagcggcgac
     5341 cgcatccgcg ccctcttcct gcgcgtcgaa gaaatcggca acaccggccg caaacaagtc
     5401 atcctgagcc gtacttccgg cgatttcctc gtcaaactgt acgccaatga agtacctgaa
     5461 attgcagacg gcatgcttga aatccgcgct gtcgcccgcg acccgggcca gcgtgccaaa
     5521 gtcgccgtca aagccaacga ccagcgcatc gatccgcaag gcacctgtat cggcgttcgc
     5581 ggttcgcgtg tcaatgccgt cagcaacgaa ttgtccggcg agcgcatcga cgttgtcctt
     5641 tggtcgcccg agcctgccca attcgtcatg agcgcgctct cacccgccga agtcagccgc
     5701 atcgtcatcg acgaagacaa acacgccgtc gatgtcatcg ttgccgaaga ccagctcgcg
     5761 ctcgccatcg gacgcggcgg tcaaaacgtg cgccttgctt ccgacctgac tggctggcag
     5821 ctcaacatca tgacttccgc cgaggcagac gaacgcaatg cggcagaaga tgccgccatc
     5881 cgccgcctgt ttatggatca cttgaacgtg gacgaagaaa ccgccgacgt actggttcag
     5941 gaaggttttg caaccttgga agaagtcgcc tatgttcctg ccgccgaact gcttgccatt
     6001 gaaggatttg acgaagaaat cgtcgatatg ctccgcaacc gcgcccgcga tgccatcctg
     6061 accatggcga ttgccgccga agaaaaactg ggcgaagtgt ccgacgatat gcgcaacctc
     6121 gaaggcatag atgccgatat gctccgcagc cttgccgaag caggcattac cacccgcgac
     6181 gacttggcag agcttgctgt ggacgaactg attgaaatca ccggtgtaaa cgaagaaacc
     6241 gcaaaagccg tcatcctgac cgcacgcgaa cactggttta ccgaagacaa ataaaggggg
     6301 tacagatgag taacacaacc gtagaacaat ttgccgccga gctgaaacgc cccgtcgaag
     6361 acctgttgaa acagttgaaa gaagccggcg tcagcaaaaa cagcggcagc gattccctga
     6421 cgctggacga caaacagctt ctgaacgcct acctgaccaa gaaaaacggc agcaacggcg
     6481 gtaccatcag catccgccgc accaaaaccg aagtcagcac cgttgacggc gtaaaagtcg
     6541 aaacacgcaa acgcggacgc actgtcaaca ttccttctgc cgaagaattg gcagcacagg
     6601 taaaagccgc ccaaacccaa gccgcacctg tccggccgga gcagacggca gaagacgcgg
     6661 caaaagcccg agccgaagct gccgcacgtg cagaagcccg tgccaaggca gaagcggaag
     6721 cggcaaaact gaaagcggca aaagcaggca acaaagccaa acctgccgcg cagaaaccca
     6781 ccgaagcaaa agccgaaacc gcacccgttg cggcggaaac caaacccgcc gaagaaagca
     6841 aagcggaaaa agcccaagcc gacaaaatgc cgtctgaaaa acccgccgaa tccaaagaaa
     6901 aagccgccaa gccgaaacac gagcgaaacg gcaaaggcaa agatgccaaa aaaccggcga
     6961 aacctgccgc acctgccgtg ccgcaacccg tggtcagcgc agaagaacag gcgcaacgcg
     7021 atgaagaagc acgccgcgcc gccgcacttc gcgcccacca ggaagccctg ttgaaagaga
     7081 aacaggaacg ccaggcacgc cgcgaagcca tgaaacaaca ggcagaacaa caggcaaaag
     7141 ccgcacagga agccaaaacc ggcagacagc gtcccgccaa acctgccgag aaacagcagg
     7201 cagccgcgcc agccgtcgaa aataaacctg tcaatccggc aaaagcgaaa aaagaagacc
     7261 gccgcaaccg cgatgacgaa ggtcaaggcc gcaacgccaa aggcaaaggc ggaaaaggcg
     7321 gacgcgaccg caacaatgca cgcaatggcg acgacgagcg cgtacgcggc ggtaaaaaag
     7381 gcaaaaaact caaactcgag ccgaaccaac acgccttcca agcaccgacc gaacctgtcg
     7441 tacacgaagt tttggtgcct gaaaccatta ccgttgccga cttggcacac aaaatggcag
     7501 tcaaaggcgt ggaagtggtc aaagccctga tgaagatggg catgatggtt accatcaacc
     7561 aatccatcga ccaagacacc gccctgattg tcgtcgaaga actcggacac atcggcaaac
     7621 ccgccgccgc cgacgatccc gaagccttct tggacgaggg cgcggaagcg gtggaagccg
     7681 aagcattgcc gcgtccgccc gtcgttaccg tcatgggcca cgtcgaccac ggcaaaacct
     7741 cgctgctgga ctacatccgc cgtaccaaag tggtacaggg cgaagcgggc ggcattaccc
     7801 aacacatcgg tgcataccac gttgaaaccc cacgcggcgt gattaccttc ttggatactc
     7861 cgggtcacga agcgtttacc gccatgcgtg cgcgcggtgc gaaagcaacc gacatcgtga
     7921 ttcttgtggt cgccgccgac gacggtgtga tgccgcaaac catcgaagcc attgcacacg
     7981 ccaaagcggc aggcgttccg attgtggttg ccgtcaataa aatcgataaa gacactgcca
     8041 accccgaacg tatccgccaa gaactgaccc aacacgaagt catccccgac gattggggcg
     8101 gcacggttca attcatcgac gtttctgcga aaaaaggaac gaacatcgac gcgctgctcg
     8161 aagccgtatt gctcgaagcc gaagtattgg aactgaccgc acctgtcgat gcgcccgcca
     8221 aaggcatcat cgttgaggcg cgcttagaca aagggcgcgg cgcggttgcc acattgctgg
     8281 ttcaaagcgg tacgctgaaa aaaggcgata tgctgctggc cggtaccgca ttcggcaaaa
     8341 tccgcgcgat ggtcgatgaa aacggcaaat ccattaccga agccggcccg tccatcccgg
     8401 tcgaaatcct cggcttgtcc gacgtaccga atgcgggtga agacgcgatg gtattggcgg
     8461 acgagaaaaa agcgcgcgaa atcgccctct tccgccaagg caaataccgc gacgtgcgcc
     8521 ttgccaaaca gcaggcggcg aagctggaaa atatgttcaa caatatgggc gaaacccagg
     8581 cccaatcttt gtcggtcatc atcaaggcag acgttcaggg ttcttacgag gctttggcgg
     8641 gcagcctgaa aaaactgtcc accgacgagg tgaaagtgaa cgtattacac agcggcgtgg
     8701 gcggcattac cgaatcggat gtcaaccttg ccatcgcgtc cggggcgttc attatcggct
     8761 ttaacgtgcg tgcagatgcc tcttcgcgca aacttgccga aaatgaaaat gtggaaatcc
     8821 gctactacaa catcatctat gatgccatcg acgacgtgaa agccgccatg agcggtatgc
     8881 tttccccgga agagaaagaa caggttaccg gtacggtcga aatccgtcag gtcatctccg
     8941 tttccaaagt cggcaatatt gcaggctgta tggttaccga tggtgtggtc aaacgcgatt
     9001 cccatgtccg cctcatccgc aacaacgtgg ttatccatac cggcgagctg gcttcgttga
     9061 aacgctataa agacgacgta aaagaagtcc gcatgggctt tgagtgcggt ctgatgctca
     9121 aaggctacaa cgagattatg gaaggcgacc aactggaatg cttcgacatc gtcgaagttg
     9181 cccgcagcct gtaattcctt tgcaaataaa atgccgtctg aagccttcag acggcatcgg
     9241 aaaacgggtt ctgtatcata cagaacccgt tttttgtcgc aaatcggctt cagcgaccct
     9301 cctgccttat cccgatttga atctgacttg ccatacaaac aggcttcaga cggcattata
     9361 gtgaattaaa tttaaaccgg tacagcgttg gctcgccttg ccgtactatt tgtactgtct
     9421 gcggctcgcc gccttgtcct gatttaaatt taattcacta tattttcccg acaggcggat
     9481 ttgaagtttc tccacatatc cggcgcgttc ggtacggctg gtttcggggc ggtacgtatt
     9541 gagcgacgac catttccaat gactgcgggc tttgttgagt tcgggcggga gtctggcggc
     9601 gtcccacggg gctttgcggc tgtgcagctc gatatccgac tgtgccgcgt gtccgcgcgt
     9661 ttgcaggacg tggagcaaat cgagggcgcg ggcggcgagc agggtcaagg tttcagggtc
     9721 ggtgtgcaag gtttggcggc cggagagttt gtcggaaatg gtgcgggtat tgggcaggat
     9781 gccgcccaaa aagccgccga ttgccgtacc caatccgagc gagccgccga gtgtggcgat
     9841 gtccagcccc aagccgatga gcgcgccggt tgccgcgccc gtgccggtgc ggatgccgta
     9901 ttgtttgagc aattcgctgt cgaacgggtc ttggcggaag gcttgcggca tccagtcgcc
     9961 gccgtcgatt tcgctgtggt agaaacggta gagggcaaac agccgctgct gcatctgccg
    10021 ttcgagttgg cgtatttccg cctgcatggt ttgcagcacg gtggcggtat cctcgttttc
    10081 gtccacttcc tgcctgaagg cggcggcatc gagcaggaaa tcggcgattt cgcggcgcgc
    10141 ttcgccgtcc agccgctgcc attcgcgccg gcgcatggct gtcaggcggt caagtgtgct
    10201 gcgttcgggc aacatggtgg cgaggttttc ccacaggcgt agttcgcctt caaaatcaaa
    10261 ggcgacggtg tcgaaccctg cgaaaacgtg caggtttctc ctcgccagca tggttgtcca
    10321 cgattcggga agctgtccgc cggtaaagtt gaacacgggc ataaccggtt tggcacacca
    10381 tgaaaggatg gtcaattcat cccgatattt gtcgaggacg ggttcgcgcg cgtcgatgac
    10441 gtacattgcc atatcgcttt gcaagacttg ccgtaagact ttggcttcct gattgaaatc
    10501 atggtgcgca ccgtggctgc cgagaaactg ttgcagccgc tcgatgccgt ctgaacgcgt
    10561 atccgtatgg gtttccagcc attccaaaac accgcccgcg tcttcgagtc cgggcgtgtc
    10621 atacaggaaa accagcatgt ccgcgccgtc gctgatggcg gcttcttcga catggcgcgt
    10681 agtggacggg gcatttttga cttcgccgaa gccgctgtcg cgcaataggg tgcgcaggag
    10741 cgaggttttg ccggtattgg tatgcccgac gacggcgagg gaaaggggtt gtttgttcat
    10801 gatgtttttg aagaatggat tttcagacgg tcttttttca gaatggcggc ttaacagaac
    10861 atttcaagtg agtttattgg tctttcaaac gcccttcctg cgccgccctg tcaggctcaa
    10921 gccacgccgc gccgcattcg gccagcgcgt tacgccaatg tcccagcttt tccgaaaggt
    10981 cgtctgaaag cccctgttcc gccaaaagct gcaccaccgc gccgccctgc gccgcttccg
    11041 aaagtcggac aatctgccgc agcacgcccc ggtccggcac agtttgggcg cgcacgccga
    11101 taagcagttg cgccggtttc tgcttcagct ctgtctccag cgcggcaacc tgttcccgat
    11161 tggtggcaac gcccttatcc agccattcct gtgccagcct gccctcgaac cacgcgccgt
    11221 cctgccattc ggtttccagc atgaccgccc atttcggcgc atcgttcaag acgattttcg
    11281 gcgaaacggc ggacacggtt tcccgacgcg tatccgcatc gacgatttgc gtctgccagc
    11341 ggcggatgac cgcctgataa tagggctttt ccaaatccaa gccgtttttg cttgttttca
    11401 aaaggatttt acacaccacc caagccaaga agcgcggcag gatgccgtag caggcgatac
    11461 tgccgaccag cagccccgac caagcctgcg catcggcaat attgccgttc agacgacctt
    11521 caactaccgc ccgcgcatcg gggacaggga aaccgagttt cgacggcagc catgccaaca
    11581 tttccaccag ccgtaccgaa gcggcattgc tcaacagcgt gctttcccag ttgaacgtat
    11641 attgccgcac caaaagcagc agcaataccg acaccagcat tccgagcagc gtgcagagcc
    11701 acaggctgtg cgacgttgcg cctattttcc aacgtaccga aggttgccgc cactcgtcgg
    11761 catacagccg caacaccgcc tgatttacag ggtctctgcc ccgaaaccac gtcgccggac
    11821 tgctgaaaaa acgccccact ttcacgcgca ggaacaacgt tgccaaccat actgccaaca
    11881 taagcgtatt catgcccaac acgcccgcca aaaccaaaaa gaaattcagc ccctgattgt
    11941 ccattagaag ataagtgctt gaaaaaccgg taaaaaatgc aaacgtcgct gctgccaccc
    12001 acaaccagaa cgaccccgca cgcacacgtt ccaacgtctc ccgcagcata cggttcctgt
    12061 caatcatctc cgcccgacgg atgatttttt cctccgtact gccgtccacg cggcgcaaag
    12121 cctccgtcgc ctgcacggga tcgccgctga aaataaagcc gccttcttcc aaaatacgga
    12181 ccagctcaac cagttttcgg gatggattca acataaaatg ccgtctgaaa ataaaaaaca
    12241 gattttaaca cacgcatttt caagaatatt cacagtgtag gcaaagagta aatcccacac
    12301 agaggcaaaa gtatcggcgt aaactgactg cctctacttt cccgaaagat tgtgcgatgt
    12361 atacaggcga acgcttcaat acttacagcc atttgagcgg tttgattctg gcggcggcag
    12421 gtttggtgct gatgctgctg aaaaccatag gacacgggga cggctaccgt atcttcagcg
    12481 tatcggttta cggcatcagc cttcttctgc tctatttgag ttcctcgctg taccacggaa
    12541 ttgcagccgg aaaactgaaa agcattttga aaaaaaccga ccactgcatg atttatgtcc
    12601 tgattgccgg aagctacaca ccgtttgcac tggtttcttt gagaaacggg ccgggctgga
    12661 cggtattttc actgtcctgg ctgctggcgg ctgcaggaat cgcacaagaa ctcaccatcg
    12721 gacggaaaag cgaaaaacgt ctgctgtcta ttgtgattta tgtcgtcatg ggttggatgg
    12781 tcttggcggt aatgaaatcc ctgacagcct cactcccgtc ggcaggactg gcttggctgg
    12841 cggcaggcgg tatgctgtac agcgtcggca tttactggtt tgtaaacgat gaaaaaatcc
    12901 gacacgggca cggaatctgg catctgttcg tattgggcgg cagcatcacc caatttgtca
    12961 gtgtgtacgg ttatgtaatc tgaatgccgt ctgaaaaaca aaacctcccg atcctgaaga
    13021 ttgggaggtt ttctgtttgc cggacatcag cccttgtcgt ggaactcgtg gaattcatac
    13081 ggataagaca aatcccgacc cgcttttttt tgtgccaaat aatcatcata aatggcacgg
    13141 atttccttac gcagcaagaa cagggcaatc aggttgggga taaccataaa accgttgaac
    13201 atatccgaca ggctccaaac caaatcgact ttgccgagcg tacccaaaac aatggcaagc
    13261 agaaccaatg cgcgatagat gcccaagtgt cttcccctga aaagaaaacg gatgttggac
    13321 tcgccgaaat aataccagcc gataatggtc gtaaaggcga agaaggtcag acacacggca
    13381 agcaattgcg aaccgaagcc cgggaatgcc ttgttaaagg caaattgagt aaccgccgca
    13441 ccctgttcgc ccgaaaggtt ggcatcggtc agcaggataa tcagcgcagt tgccgtacat
    13501 accaaaatcg tatcgataaa cacaccgaca aatgccgcca taccttgctg caccggatgc
    13561 ttcacatccg cagtcgcgtg ggcgtgcgga gtcgaaccca tccccgcctc attggaaaac
    13621 agaccgcgcg ccacgccgaa acgtatcgct tcgcgcatac cgatacccgc cgcaccgccc
    13681 aaaacggctt cgggattgaa ggcggcggta aagatgtggt tgaacatcgg cacaatatgg
    13741 tcggaaaatt caaacaggat aacgacggcg cacaaaatat aaacaaccgc cataaacggc
    13801 acgacaaact gggcaatatt ggcaatacgg ttcacgccgc caatcacaac catgcccgca
    13861 aggacggcaa gcacaatacc gactgccaaa gaaggcacat caaatgcaat ggtaacggca
    13921 gaagcaatgg agtttgcctg tgtcgcatta ccgataaagc ccaatgcgat aatcaacgca
    13981 atggaaaaga aaccggacaa aaaacgcgcc gcgcccctgc cgattttcgg agtcagaccg
    14041 tgggtgatgt agaacgccgg cccaccgatg tatttgccgt ggctgacgac gcggtatttc
    14101 tgcgccagca gtgcctccgc aaaaatcgtg gacatcccca aaacggcaga aacccacatc
    14161 caaaaaatcg cgcccggccc gcctgcggtg atggcggtcg ccacgccggc gacgttgccc
    14221 gtaccgattt gcgcagatat ggcaaccgcc aacgcctgaa actgcgataa agacttgtcg
    14281 tctttatcgc ctttggcaaa caagccgccg aatacggatt tgaatcccgc gcccagcttg
    14341 gtaatctgcg gcgcaccgag atacagcgta aaaaacaggc cgatacccaa aagcgcgtaa
    14401 atcagcaggt agtcccaaag aaaccgattg actgtaccca ccagaacaga caatatattt
    14461 tccataaaat aaaccttatc ttacaattaa aatgactgcc ttccaaaaga cattccaata
    14521 aggaaacacg gcgagcagac cgtatttgcc gcaacagatg ccttaaattg tcaacaatcg
    14581 gggagaagct gcgccatcat accgtaaaat atcgttaatt aaaacatttc tttattttta
    14641 agcggaaagc ggaggaaatc gctttcagac agcatagaca acggcacggc ataaaacagg
    14701 atattttggg tacttgcaac ttatgttaaa atgccgaccg taaaaaatct gacaaaaaca
    14761 gattaattat ttgaaataag aaaggaaatt tatggcaggc catagcaagt gggcaaatat
    14821 ccagcataaa aaagcccgtc aggatgccaa acgcggcaaa atctttaccc gtttaatcaa
    14881 agaaatcacc gttgcggcgc gtatgggcgg cggcgacccc ggttcaaatc cgcgcctgcg
    14941 cctggctttg gaaaaagcag ccgaaaacaa tatgcccaaa gacaatgtgc aacgtgccat
    15001 cgacaaaggt acgggcaact tggaaggcgt ggaatacatc gagttgcgct acgaaggcta
    15061 cggcatcggc ggcgcggctt tgatggtgga ctgcctgacc gacaacaaaa cccgcaccgt
    15121 tgcggacgta cgccacgcgt ttaccaaaaa cggcggcaac ttgggtaccg acggctgcgt
    15181 ggcgttcaac ttcgtgcatc agggctattt ggtattcgaa cccggcgttg acgaagacgc
    15241 gctgatggaa gcggctttgg aagccggtgc ggaagacgtg gttaccaacg acgacggttc
    15301 catcgaagtc attaccgcgc caaacgattg ggcgggcgta aaatccgctt tggaggcggc
    15361 aggttacaaa tccgttgacg gcgacgttac gatgcgcgcc caaaacgaaa ccgaactctc
    15421 cggcgacgat gccgtcaaaa tgcaaaaact gattgacgcg ctggaagact tggacgacgt
    15481 gcaagacgtt tacacttccg ccgtattgaa tttggactga tacgcagcac agcagacata
    15541 caataaaatg ccgtctgaac ctttcagacg gcattgattt atttagccct tgcccacgcc
    15601 caccaaaccg tcaggacaac cgccagaaaa tacgccgcgc tccaaacagg caaagcaacc
    15661 cctaacagat aatccggttc ggcacaattt ccgaacccgc gcacgacagg ctcgaaccaa
    15721 tcaaacaaag gccagccctt caatcgaaac gtccacggcg cgccgcacga aggagccgta
    15781 cccggcggca gcgactgcag ccacaactga tatgccgcaa cagaaatacc cgtaacggcc
    15841 ggaatactga taaagacagc accgaacaaa ccgcccgccc ttcttcttgg tctgcacatc
    15901 aggacaattg ccgtacacaa tgcggttgcc aaaacgcata accgctgact gatacacaaa
    15961 acgcaaggct ccatacccaa aacatactgt gccgccaaag aaccggcaaa tgcacagacc
    16021 gaaacggcaa acagcagcca aacggctttt ctaaataacg gggtcatttt ctcaacacac
    16081 caatcaaaat accgatatgc cgattttgct ggatatatcc cgagatggca agggacgaat
    16141 cgacaccggc tcaggtgcgg acgatttcgg ttttccccga tatgcataaa acctgacaag
    16201 ggacaaaacg gcgatttgcc cgcacaatgc ccgcaaaaaa atacatctag aggatttgaa
    16261 tttcggcaaa tttagcgaat caaaagttta tttcaatgaa attatatgat ttttttgaat
    16321 aagcggattg acaggttttt gaaggaattt gttaccggat agccatcggg caagtttttt
    16381 gcaaaatttg aatcggtcgg gtaaattttc aaaaaataat tgacagcgga taagaaacgg
    16441 cggataattc tcgccgtcga gttgcttgat gcagcttgat ttttctcctc tatttctcct
    16501 ttgtagactt ggcacacatt caaccggatg tgtgcatttt tttatctccg ctttttttga
    16561 aatttaatta cttttattgt ttgaaattcc attctttaag aaatttaaca agaaaaacgc
    16621 ttgctttttg accggaaaag ctgcataatt cattccgtta gctggttcga gtagtcagtt
    16681 aatagtttct cctctatttc tcctttgtag acttggcaca cattcaaccg gatgtgtgca
    16741 tttttttatc tgaagcaaca agcctctgtg cgtgatgttg ttatgtttca tttaggtgtc
    16801 aaaccgcata gccagcctga aatattcaat ccaaatccaa aaccggattt tctttgacct
    16861 cctccatcac aacataactc ctactctccg aagcggcagg cagttgcaat aggatattgc
    16921 ctagcatatc ccgataggca gacatatcgg gcaaacgtac tttaatcaga tagtcgtatt
    16981 cgcccgacac caagtggcat tccataattt gcggaatttt cagcacttct tttttgaaat
    17041 cttcgaaaat attgcccgat ttggattgca gcttcagctc gacaaaaacc aatagcggtt
    17101 tgcccaacag atggggattg aggtgggcgt gatagccgga aatataatgt tcccgctcca
    17161 aacggcgcac cctctctgta acgggcgtgg tggacaagcc taccttctcg gcaagctccg
    17221 tcatcgggat gcgggcattc tgttggagga tcttaagaat gcggaaatcg attttatcta
    17281 gttctttcat ttggattgcc ttgtatttat tattgatttt aacaaataga
//
LOCUS       DAWKJW010000021        17035 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.021, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000021 DAWKJW010000000
VERSION     DAWKJW010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17035)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17035)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17035
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.021"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(65..904)
                     /locus_tag="WJJ54_000575"
     CDS             complement(65..904)
                     /locus_tag="WJJ54_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HEZ7341470.1"
                     /translation="MKQLRDNKAQGSALFTLVSGIVIVIAVLYFLIKLAGSGSFGDVD
                     ATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNG
                     DWAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDE
                     AAPADNAASGTASAPADSAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPG
                     IPGIGKKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSG
                     AKF"
     gene            1189..1264
                     /locus_tag="WJJ54_000576"
     tRNA            1189..1264
                     /locus_tag="WJJ54_000576"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1222..1224,aa:Arg,seq:ccg)
     gene            complement(1329..2522)
                     /locus_tag="WJJ54_000577"
     CDS             complement(1329..2522)
                     /locus_tag="WJJ54_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HEZ7341471.1"
                     /translation="MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGKMP
                     VLESVRRAETARAATPAPSPYLPMEGLDTYRSAVQHLLFGTDNPALAQGRIVTVQTLG
                     GSGALKVGADFLHRWFPEARAYVSDPTWDNHRGIFEGAGFEVGTYPYYDPATVGVKFD
                     EMTAFFNTLPENSVLILHPCCHNPTGVDMSEQQWDEVLHIIKTRKLIPFMDIAYQGFG
                     GDLDSDAYAVRKAVEMELPLFVSNSFSKNLSLYGERVGGLSVVCPNKEEADLVFGQLK
                     FTVRRIYSSPPAHGAYIAADVMNSPELYALWQNEVYMMRDRIRAMRQKLYDVLTAQIP
                     DRDFTYFIKQRGMFGYTGLSVEQVRRLRDEFAVYLLDSGRMCVAGLNTSNTDYVARAF
                     AEVLK"
     gene            complement(2543..3631)
                     /gene="trmA"
                     /locus_tag="WJJ54_000578"
     CDS             complement(2543..3631)
                     /gene="trmA"
                     /locus_tag="WJJ54_000578"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HEZ7341472.1"
                     /translation="MSDYTQQLQDKKDRLKTLFAGLDVPEWEVYESPDKHYRMRAEFR
                     IWHEGGEMFYAMFEKGQKASGASMIRCDRFEAASEAVNRLMPELIAAAAQSPELKKRW
                     YAVEFLSTLSGEMLVTMIYHKRLDNEWMQAAQALQQQLDISVIGRSRGQKIVLKQDYV
                     TETLKVGNRDFRYRQIEGSFTQPNAAVCQKMLEWACGAAEGLDGDLLELYCGNGNFTL
                     PLSEKFERVLATEISKTSISAAQWNIEANRIGNIKIARLSAEEFTEAYTRKREFKRLK
                     DGGIALTDYAFSTIFVDPPRAGIDEETLKLVSQFDNIIYISCNPETLRANLDTLVETH
                     AVERAALFDQFPFTHHIESGVLLKKKIL"
     gene            3778..4878
                     /gene="aroC"
                     /locus_tag="WJJ54_000579"
     CDS             3778..4878
                     /gene="aroC"
                     /locus_tag="WJJ54_000579"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEZ7341473.1"
                     /translation="MAGNTFGQLFTVTTFGESHGAGLGCIIDGCPPGLALTESDIQAD
                     LDRRKPGTSRHVTQRREADQVEILSGVFEGKTTGTPIALLIRNTDQRSKDYGNIAQSF
                     RPGHADYTYWHKYGTRDYRGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQV
                     GEKKIRFEGCEHISQNPFFAANQSQIAELENYMDSVRKSLDSVGAKLHIEAANVPVGL
                     GEPVFDRLDAEIAYAMMGINAVKGVEIGAGFGSVVQRGSEHGDELTPQGFLSNHSGGI
                     LGGISTGQDIHVNIAIKPTSSIATPRRSIDINGDPVELATHGRHDPCVGLRAAPIAEA
                     MLALVLIDHALRHRAQNADVAVDTPDIARSDK"
     gene            4969..5394
                     /locus_tag="WJJ54_000580"
     CDS             4969..5394
                     /locus_tag="WJJ54_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant transport activator ProQ"
                     /protein_id="HEZ7341474.1"
                     /translation="MTQETALGAALKSAVQTMSKKKQTEMIADHIYGKYDVFKRFKPL
                     ALGIDQDLIAALPQYDSALIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVTPEE
                     QAIAQNHPFVQQALQQQSAQAVAETPSVEAEAAESSAAE"
     gene            complement(5468..7453)
                     /gene="parE"
                     /locus_tag="WJJ54_000581"
     CDS             complement(5468..7453)
                     /gene="parE"
                     /locus_tag="WJJ54_000581"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEZ7341475.1"
                     /translation="MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDN
                     AADEALGGFATAIDVQIHEDGSLSVRDNGRGIPVGLHPEEGVPVVELVFTRLHAGGKF
                     NKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVTVKREGKIHRIVFAGGDVVEPLAQVG
                     KCAVKDSGTEVRVWPDGKYFESPNYSILELERLLRAKAVLLPGVRVSLTRPVKGEDEA
                     HTQTWHYPDGLKSYLTDLIADAQEAVPLFSCENYISDEHNGDFSIGEGAAFALTWLEE
                     GSCANESYVNLIPTPLGGTHEAGLKQAVFNAVNNFINLHNLLPRGVKVQSDDVFGKTA
                     FVLSARVLDPQFQGQTKDKLTNRDALKLVATVSGDPLELWLNQNVDFGKKIAELAIRQ
                     AQARMRSVKKIEKKKGSGVAVLPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
                     TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHGINDHPDLSGLRYGKIAI
                     LSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRVDVNAQGKSKPARKFYA
                     LDQNELDSILERLQKEGVKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPE
                     GADDETRDIFVKLMGKGEAAARRAWMEREGDTAELDI"
     gene            complement(7520..8044)
                     /locus_tag="WJJ54_000582"
     CDS             complement(7520..8044)
                     /locus_tag="WJJ54_000582"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEZ7341476.1"
                     /translation="MLDREGYRPNVGIILTNNRDEVFWGKRVREHSWQFPQGGIKPGE
                     SPETAMYRELYEEVGLLPQHVKIVGRTRDWLRYDVPNNWVRREWRGSYRGQKQIWYLL
                     RLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIEFKRDVYLGALKELSSRFLRGME
                     SYEDFAARQPSGNR"
     gene            8210..9505
                     /gene="serS"
                     /locus_tag="WJJ54_000583"
     CDS             8210..9505
                     /gene="serS"
                     /locus_tag="WJJ54_000583"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEZ7341477.1"
                     /translation="MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKT
                     EELQASRNSISKQIGALKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWL
                     LSIPNLPHESVPAGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG
                     ARFTVMRGQIARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDL
                     FHVTRGGDESKTTQYLIPTAEVTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGK
                     DTRGLIRQHQFDKVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMG
                     FGATKTYDLEVWVPAQNTYREISSCSNCEDFQARRMKARFKDENGKNRLVHTLNGSGL
                     AVGRTLVAVLENHQNADGSINIPAALQPYMGGVAKLEVK"
     gene            complement(9583..10581)
                     /locus_tag="WJJ54_000584"
     CDS             complement(9583..10581)
                     /locus_tag="WJJ54_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HEZ7341478.1"
                     /translation="MKIAIYGTKSYDREHFTRANRHFGFELEFFDFMLDAKTAKMAEG
                     AEAVCIFVNDDGSRPVLEKLAQIGVKTVALRCAGFNNVDLKAAEELGLKVVRVPAYSP
                     ESVAEHTVGLMLTLNRRIHKAYQRTRDANFSLEGLTGFNMYGKTAGVIGTGKIGIATM
                     RILKGFGMNLLAHDPFCNPEAEKIGGRYVDLDELYAQSDIITLHCPATPENHYMLNEA
                     AFDKMKDGVMIINTSRGGLIDSSAAIEALKRRKIGALGMDVYENERELFFEDKSNDVI
                     TDDVFRRLSSCHNVLFTGHQAFLTEEALGNISEVTLSNIREVGQTGDCGNAVRADG"
     gene            complement(10706..11782)
                     /gene="prfA"
                     /locus_tag="WJJ54_000585"
     CDS             complement(10706..11782)
                     /gene="prfA"
                     /locus_tag="WJJ54_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEZ7341479.1"
                     /translation="MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAE
                     LTPVVEVFQNYQLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLP
                     KDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYK
                     EVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELN
                     PVDLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAA
                     RLNDAQKREAQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMD
                     GDLAEITNALIAEHQAELLAAMGD"
     gene            complement(11872..12642)
                     /locus_tag="WJJ54_000586"
     CDS             complement(11872..12642)
                     /locus_tag="WJJ54_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEZ7341480.1"
                     /translation="MNFTDTHCHLADAALRENLPHILTAARKVGVKRFIVPATCPQDW
                     QSVAELSEMPSEHGQIRIALGIHPWFSDGIAERDCVRLEAMLARYPQAWVGEIGLDFY
                     DKTQTPQQRERQIQVFSRQLEIAQTLRRRVIIHNLKAAADIAAAVKRTGFTWGGIVHA
                     FSGSIEEAHVLAKLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLKNTV
                     NTPANILRIAEIAAQIRGTGAAEIAAITERNADSLLRP"
     gene            complement(12757..13746)
                     /locus_tag="WJJ54_000587"
     CDS             complement(12757..13746)
                     /locus_tag="WJJ54_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEZ7341481.1"
                     /translation="MKQKIFVLYTGGTIGMTQSSEGLRPDTALVGQALAPFSNGMDFD
                     WHVCGTLIDSSAVQLQNWCAWLDIIAAALPQYDGVLVLHGTDTLAYTANLFALALQGL
                     DKPIVLTGSQWPYNAVGSDAPRNLATAVAAFPLGLKQTLIAFDGKLYPAVGSSKVSTE
                     TAAGFDNPHFGALAEWDETQGWHNVRIPNQDTADVSDGLKIRYPDPQAKIAVRTLIPG
                     FAVQELADGLGQLPAHALILQSYGHGNTPADEGFIRAVRDFTRQGKLLLNISQVRQGR
                     TAAVYAQGNAFRNSGIINGGKCNLETATALMTLAVSQGWGAEDVEKELARLKL"
     gene            complement(13813..14496)
                     /locus_tag="WJJ54_000588"
     CDS             complement(13813..14496)
                     /locus_tag="WJJ54_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ7341482.1"
                     /translation="MFAFLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISG
                     MGYTNPHIMFAVGMLGVLVGDGIMFAAGRIWGQKILRFKPIARIMTPKRYEQVQEKFD
                     KYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
                     HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKA
                     AKKAAQKQQ"
     gene            complement(14687..16021)
                     /gene="glmM"
                     /locus_tag="WJJ54_000589"
     CDS             complement(14687..16021)
                     /gene="glmM"
                     /locus_tag="WJJ54_000589"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEZ7341483.1"
                     /translation="MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQK
                     PTVLIGKDTRISGYMLEAALVAGFTAAGVNVIQTGPLPTPGVAYLTRALRLSAGVMIS
                     ASHNAYSDNGIKFFAEGGVKLSDEIELEIEAKIDEEMKTQPSARLGRARRISGADDRY
                     IEFCKSTFPSHSDLRGLKLVIDTANGAGYGVAPKVFHELGAQVVSIGDEPNGYNINEK
                     CGATYTKTLQAAVLQHEADYGIALDGDGDRLMMVDKNGKVYDGDSLIYVIAKARAREG
                     INIGGVVGTVMTNMAMEIALKEQGVDFCRAKVGDRYVLEQLNQRGWLIGGEASGHILC
                     MDKHNTGDGIISALQVLAALQILNQDLATVCADWQPYPQTMINVRIQKGQKWQEASKD
                     VLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWAREGAERIASAIGSL"
     gene            complement(16151..17008)
                     /gene="folP"
                     /locus_tag="WJJ54_000590"
     CDS             complement(16151..17008)
                     /gene="folP"
                     /locus_tag="WJJ54_000590"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEZ7341484.1"
                     /translation="MARHVWQAGRFEIGLDKPKIMGIVNLTPDSFSDGGAYSQNAQTA
                     LAHAERLLKEGADILDIGGESTRAGADYVSPEEEWARVEPVLAEVAGWGVPVSLDTRR
                     TVVMEKALALGGIDIINDVAALTDEGAVELLARQADTGICLMHMQGLPENMQINPKYQ
                     DVVGEVARYLKARAAECVAAGIAPQRITLDPGFGSGFGKTLQHNIALMRHLPELMAET
                     GLPLLVGVSRKSTIGELTGETDAAERVHGSVAAALASVARGAQIVRVHDVKATADALK
                     VWEALGINL"
BASE COUNT         3783 a         4741 c         4567 g         3944 t
ORIGIN      
        1 tcccataaaa aaacggagca gatacctgcc ccgtttttat ttaatccgaa attttaatct
       61 aaatttagaa ttttgcaccg gattggtttg ccatatagtc aacagccgct ttgacttcgt
      121 catcgctcaa acctgcattg ccgcctttgg ccggcatcgc gttaaagcct tcaagggcgt
      181 gtttgtgcaa ggtttctttg ccttttttga tacgcggtgc ccaatcgtct tttttgccta
      241 tgccgggaat accgggaatc gaaccgccgt ggcacacctg acaggttgct tcgaagactt
      301 ttttaccgtc aacgccgacc gcaggggctg ccgcaccctt gtcttctgcc ttcgcttctg
      361 ccggagctgc actatcggca ggagcagaag ctgttcctga agcggcattg tcggcaggcg
      421 cagcctcatc aggattcggg aaagaaccgc cgcttttgtt cgccatgtaa gtaatcgccc
      481 gtttgagttc ctgatcggtc aggtctgccg caccgccttt ggcaggcatg gcgttaaagc
      541 cgttcagcgc gtgttggaac aaggtatcga agccttgcgc gatacgcggt gcccaatcgc
      601 cgttgtgttc cagtttcgga gcgttcggca cattgctgtc cgccgcgtgg cattggatac
      661 agattttgcc gaaaatctgt tcgccttggc gttcgccgac ggggatgccg tcgcccatcg
      721 tcaattgtcc gacgggctgg atacgggtct gcgttgccgc ttccgtagtg gcatcgacat
      781 cgccgaacga gccgctgccc gccagcttaa tcaggaaata aaggactgca ataacaataa
      841 cgataccgct cacaagggta aacagtgcag agccttgggc tttgttgtcg cggagttgtt
      901 tcatttggta ggcctcgccg tcaggttagg ttgtgctgta aattatagtt tggtgtgtta
      961 aacgcagtta acaatatttt gctggattat actgaattca cagggtcttt ccaatcgcta
     1021 tcattgaaaa tatgaaaaaa tttgccaacg gtatctgtat aaaacaaata atcctttgaa
     1081 aataatggtt tatcctcaag aaaactctcc ttatgccgcc atacgccgcc tgccggcgca
     1141 agataacctt tgccaatttg cagaatttac gttaacctta cgttttacgc acccatagct
     1201 cagttggaag agtgtcagtt tccgaagctg gaggtcacag gttcgatccc tgttgggtgc
     1261 gccaattata aagagaccgt ctgaaagata aatatttttc agacggtctt ttgacttact
     1321 tcaaactctt atttcaagac ttccgcaaat gcgcgggcaa catagtcggt attcgacgta
     1381 ttcagtccgg cgacgcacat cctgccggaa tccagcaggt aaacggcaaa ttcgtcgcgc
     1441 agcctgcgga cttgttccac gctcaatcct gtgtagccga acatgccgcg ctgtttgatg
     1501 aaataagtga aatcgcgatc ggggatttgc gcagttaaga catcataaag tttctgccgc
     1561 atcgcacgga tgcggtcgcg catcatataa acctcgtttt gccacaaggc gtaaagttcg
     1621 gggctgttca tcacgtcggc ggcgatatac gcgccgtgcg cgggcgggct ggagtagatg
     1681 cggcggacag tgaatttgag ctgtccgaac accaaatccg cttcttcctt attcgggcaa
     1741 accacgctca ggccgccgac gcgctcgccg tagagcgaca ggttttttga gaaggaattg
     1801 ctgacgaaca agggcaattc catttccacc gctttgcgga cggcgtaggc atcgctgtcc
     1861 aaatcgccgc cgaagccttg gtaggcaatg tccataaacg gaatcagttt gcgcgttttg
     1921 atgatgtgca acacttcgtc ccattgctgt tccgacatat ccacgccggt cgggttgtgg
     1981 cagcagggat ggaggatcag gacgctgttt tcgggcaggg tgttgaaaaa cgcggtcatt
     2041 tcgtcgaatt tcacgccaac agtggcaggg tcgtaatatg ggtaagtgcc gacctcgaaa
     2101 cctgcgcctt caaaaatgcc gcgatggttg tcccaagtcg ggtcgctgac gtaggcgcgc
     2161 gcttcgggaa accagcggtg caggaagtcc gccccgactt tgagtgcgcc cgagccgccc
     2221 aaggtttgta cggtaacgat gcgcccttgc gcgagcgcag ggttgtctgt gccgaacaat
     2281 aaatgctgca ccgcgctgcg gtaagtgtcc aagccttcca tcggcaggta gggcgacggc
     2341 gcaggcgtgg cggcgcgggc ggtttcggca cggcgcacgg attccaacac gggcattttg
     2401 ccttcgtcgt cgaaataaat gcctatgctc aaattgactt tttcagggcg cgggtcgttt
     2461 ttgaaggttt cgaccaaact caaaatcggg tcgcccggat agtattcgat gtgtcggtac
     2521 atagtcctta ccttttactt tttcaaagga ttttcttttt caacaataca ccactttcga
     2581 tatggtgcgt aaacgggaat tggtcgaaca gggcggcgcg ttcgaccgca tgggtttcca
     2641 ccaaggtgtc caaattggca cgcagcgttt cgggattgca ggaaatgtag atgatgttgt
     2701 caaactgcga caccagcttc aaagtttcct catcgatacc ggcacgcggc ggatcgacga
     2761 aaatagtgga aaatgcgtaa tccgtcaaag caataccgcc atccttaagg cgtttaaact
     2821 cacgttttct ggtataggct tcggtaaatt cttcagcaga cagacgggcg attttgatgt
     2881 tgccgatgcg gttggcttcg atattccatt gcgccgcgct gatggaggtt ttggagattt
     2941 cggttgccaa aacacgttca aacttttcag ataaaggaag cgtaaagttg ccgtttccgc
     3001 aatacagttc gagcaaatcc ccatccaatc cttctgctgc accgcaggcc cattcaagca
     3061 ttttctgaca cacggcggca ttcggttggg taaaactgcc ttcaatttgc cgataacgaa
     3121 aatcccgatt accgaccttt aaagtttccg ttacatagtc ctgttttaag actattttct
     3181 gtcccctgct ccgcccaata acggaaatat ccaactgttg ctgtaacgct tgcgccgcct
     3241 gcatccactc attatcaagc cttttgtggt aaatcatggt aaccagcatt tccccgctga
     3301 gcgtggacag aaattcgacg gcataccagc gttttttgag ttcgggggat tgcgcggcgg
     3361 cggcgatcag ctcgggcatg aggcggttga cagcctcgga agctgcttca aaacggtcgc
     3421 agcgtatcat gcttgcgccg ctggctttct gccctttttc aaacatggca taaaacattt
     3481 ccccgccttc gtgccaaata cggaactcgg cacgcatacg gtagtgtttg tccggagatt
     3541 cgtacacctc ccactcggga acatccaaac ctgcaaaaag ggttttaagg cggtcttttt
     3601 tatcttgaag ctgctgcgtg tagtcgctca tatcgctatc ctgaaaaatc agaccggatt
     3661 ataagccgat tttcctcgcc gcacgcaaac tctttgactg ccgccccttc aatgacggac
     3721 gggattttgt gctaaaatcc gccatctttc cacactatac tgataaaggg aaaaatcatg
     3781 gcaggcaaca ctttcggaca actcttcacc gtgaccacgt tcggcgaaag ccacggcgca
     3841 ggtttgggct gtatcatcga cggctgcccg cccggactgg cattaaccga atcagacatc
     3901 caagccgacc tcgaccggcg caaacccggc accagccgcc acgttaccca acgccgcgaa
     3961 gccgaccaag tcgaaatcct ctccggtgtc ttcgaaggca aaaccaccgg cacgcccatc
     4021 gccctcttaa tccgcaatac cgaccaacgc agcaaagact atggcaacat cgcccaaagt
     4081 ttccgccccg gccacgccga ctatacctac tggcacaaat acggcacgcg cgactaccgg
     4141 ggcggcggta ggagttccgc ccgcgaaacc gccgcccgcg ttgctgccgg agccgttgcc
     4201 aaaaaatggt tgaaagaaaa attcggcacg gaaatcaccg cctacgttac ccaagtcggc
     4261 gaaaaaaaaa tccggtttga aggctgcgaa cacatttccc aaaatccttt ttttgccgcc
     4321 aaccaaagcc aaattgccga gctggaaaac tatatggaca gtgtgcgcaa atcgttggat
     4381 tccgtcggag cgaagctgca tattgaagcc gccaacgtcc ccgtcggctt gggcgaaccc
     4441 gtattcgacc gcctcgatgc cgaaatcgcc tacgcgatga tgggcatcaa cgccgtcaaa
     4501 ggcgtggaaa tcggcgcagg ttttggcagc gttgtccaac gcggcagcga acacggcgac
     4561 gaactgaccc cgcaaggctt cctgtccaac cactcaggcg gcatcctcgg cggcatcagc
     4621 accggacaag acatccacgt caatatcgcc atcaaaccca ccagctccat tgccacaccg
     4681 cgccgcagta tcgacatcaa cggcgacccc gtcgaactcg ccacccacgg caggcacgac
     4741 ccctgcgtcg gactgcgcgc cgcccccatt gccgaagcca tgctcgcgtt agtcctcatc
     4801 gaccacgccc tgcgccatcg cgcgcaaaat gcggatgttg ccgtggatac gcccgatatc
     4861 gcccgctcgg acaagtaaaa agatttagcc aaaacacggg ctttatacta aaataccgac
     4921 cattgccgtg ccgtctgaac gcacgattct tagaggaata caaccgaaat gacacaagaa
     4981 accgctttgg gtgcggcact gaaatccgcc gtccaaacta tgagcaaaaa gaaacagacc
     5041 gaaatgatcg ccgaccacat ctacggcaaa tacgatgtgt tcaaacgctt caaaccgttg
     5101 gcactcggca tcgatcagga tttgattgcc gctttgccgc aatacgattc cgcactgatt
     5161 gcacgcgtcc tcgccaacca ctgccgacgt ccgcgctatc tgaaagcctt ggcgcgcggc
     5221 ggcaaacgtt tcgatttgaa caaccgtttc aaaggcgaag ttacccccga agaacaggcg
     5281 atcgcgcaaa accatccttt cgtgcagcag gctttgcaac agcagtccgc ccaagctgtc
     5341 gccgaaacgc cgtctgttga agccgaagca gccgaatctt ccgcagcaga ataaatcccc
     5401 aaacgaaatg ccgtctgaaa accgatttgg tttcagacgg cattttttcg tatgcggcaa
     5461 tcacggttca aatatcgagt tccgccgtat cgccttcgcg ttccatccag gcacggcggg
     5521 cggcggcttc gcctttgccc atcagtttga cgaagatgtc gcgcgtctcg tcatccgcgc
     5581 cttcggggat ttgcacctgc aacaggcggc gggtgtcagg gtgcatggtg gtgtctttga
     5641 gctggtcggg gttcatttcg cccaagccct tgaaacggct gatggaatag gcggtttctt
     5701 tgacgccttc tttttgcagc cgctccaaaa tgctgtcgag ttcgttttgg tcgagggcgt
     5761 agaatttgcg ggcaggtttg cttttgcctt gtgcgttgac atcgacgcgg aacagcggcg
     5821 gctgggcgac gtagatgtgt ccgtcggcaa ccagtttcgg gaagtggcgg tagaataagg
     5881 tcagcagcaa aacttgaata tgcgagccgt ccacgtcggc atcggacagg atggcgattt
     5941 tgccgtagcg caggccgctt aaatcgggat ggtcgttaat accgtgcgga tcgacgccga
     6001 tggcgacgga aatgtcgtgg atttcggcgt tgccgaagag ttggtcgggg tggacttcaa
     6061 agctgttgag cactttgccg cgcaggggca ggatggcttg ggtggctttg tcgcgggcga
     6121 gtttggcgga gccgccggcg gaatcgcctt cgacaaggaa gagttcgttt tcgcggatgt
     6181 cttcgctttc gcagtcggtc agcttaccgg gcaggacggc gacgccgctg ccttttttct
     6241 tttcaatctt tttaaccgaa cgcatccgcg cctgtgcctg acggatagcg agttcggcga
     6301 tttttttgcc gaagtccaca ttttggttta gccacaattc caaaggatcg cccgatacag
     6361 tggcaacgag tttcagcgca tcgcggttgg tcagcttgtc tttggtttga ccttggaact
     6421 gagggtcgag gacacgggcg gagaggacga aggcggtttt accgaacacg tcgtcgcttt
     6481 gcactttcac gccgcgcggc aagaggttgt gcaggttgat gaagttgttg acggcgttga
     6541 acacggcttg tttcaagccc gcttcatgcg tgccgcccaa aggggtggga atcaggttga
     6601 cgtagctttc gttggcacac gagccttctt ccagccaagt cagggcaaag gcggcgcctt
     6661 cgccgatgct gaaatcgccg ttgtgttcgt ctgaaatgta gttttcgcaa gagaacagcg
     6721 gtacggcttc ctgcgcgtcg gcaatcaggt cggtcagata gcttttcagg ccgtcggggt
     6781 aatgccaggt ttgggtgtgc gcttcgtctt cgcctttgac cggacgggtc agggaaacgc
     6841 gcacacccgg cagcagcacg gctttggcac gcagcaggcg ttcgagttcg agaatgctgt
     6901 aattcgggct ttcaaaatat ttgccgtccg gccacacgcg cacttcggtg ccgctgtctt
     6961 tgacggcgca tttgcccact tgtgccaacg gttcgaccac gtcgccgccg gcaaacacga
     7021 tacggtggat tttgccttcg cgtttaaccg ttacttcaag gcgggtggaa agggcgttgg
     7081 tcacggatac gcccacgccg tgcaggccgc ctgaaaaggc atacgcgctg ccgccgtctt
     7141 ttttgttgaa cttgccgcct gcgtgcagac gggtgaacac gagttcgact acgggtacgc
     7201 cttcttcagg gtgcagaccg acgggaatac cgcggccgtt gtcgcgtacg gaaagcgaac
     7261 cgtcttcatg aatttgcacg tcgattgccg tagcgaaacc gcccaacgcc tcgtccgccg
     7321 cgttatcaat cacttcctga cagatatggg tcgggctgtc ggtgcgggtg tacatgccgg
     7381 gacgttcttt gaccggctcc aagcctttga ggacggtgat gctggattcg ctgtattggt
     7441 tgtttttagc cataggaata atctgaaagt aagaaaaaca acgctttcag acggcctgaa
     7501 agcgttgcgt tccgttgttt taccggttgc cggaaggttg gcgggcggca aagtcttcat
     7561 aactttccat accgcgcagg aagcgggaag agagttcttt caacgccccc aaataaacgt
     7621 cgcgtttgaa ctcgatgact tcgtcaacgg gcgcccaata ttgatgccaa cgccagccgt
     7681 caaattcggg gtggcgggtg gcgcgcaggt tgacatcgca atcccggccg gtcaggcgca
     7741 ggagatacca aatctgcttc tgcccgcgat aagagccgcg ccattcgcgg cgcacccagt
     7801 tgttcggcac gtcgtaacgc agccagtcgc gcgtccgccc gacgattttg acgtgttgcg
     7861 gcagaagtcc gacttcttcg taaagctcgc ggtacatcgc ggtttcgggg ctttcgcccg
     7921 gcttgatgcc gccttgcgga aactgccaag aatgttcgcg cacgcgctta ccccaaaaga
     7981 cttcgtcgcg gttgttggtt aagatgatac cgacattggg gcgatagcct tctctgtcca
     8041 acacggtgtc gccctccgtt aaattcaatc ttgggatttt cccacaaatc gaacggtttt
     8101 gacaaatcag acggtatggt tcaagcatgt cgaaacacgg acggattcgg gaaaatatct
     8161 taaatttggt ttacaataat gtgtttcaaa ttaattcggg aatcagacca tgttagatat
     8221 ccaattgctc cgcagcaaca ccgccgccgt tgccgaacgg cttgcacggc gcggttatga
     8281 ctttgatacc gcacgttttg acgcactgga agaacgacgc aagtccgttc aggtgaaaac
     8341 tgaagaacta caagcctcgc gtaacagcat ttctaaacaa atcggcgcac tgaaaggtca
     8401 gggcaaacac gaagaggcgc aggcggccat ggatcaagtc gcccaaatca aaaccgattt
     8461 ggaacaggct gccgccgatt tggatgccgt tcaaaaagaa ttggacgcat ggttgttgag
     8521 catacctaac ctgccgcacg aaagcgtacc tgccggtaaa gacgaaaccg aaaacgtcga
     8581 agtccgcaaa gtcggcaccc cgcgcgaatt tgactttgaa atcaaagacc atgtcgattt
     8641 gggcgaacct ttgggtttgg attttgaagg cggtgcaaaa ctctccggcg cacgatttac
     8701 cgtgatgcgc ggacaaatcg cccgtctgca ccgcgccttg gcacagttca tgctggatac
     8761 gcacacgctg caacacggct acaccgagca ttacacaccc tatatcgtgg acgacaccac
     8821 cttgcaaggc acgggtcagc tgccgaagtt tgcagaagat ttgttccacg ttacccgtgg
     8881 cggcgacgag agcaaaacca cgcaatatct gattccgaca gctgaagtta ccctgaccaa
     8941 taccgttgcc ggcagcatta tcccgtccga acaactgccg ctgaagctga ccgcgcattc
     9001 gccctgtttc cgcagcgagg cgggttcgta cggcaaagac acgcgcggtc tgattcgcca
     9061 gcaccagttc gacaaagtgg aaatggttca aatcgttcat cccgaaaaat catacgaaac
     9121 gctggaagaa atggtcggcc atgccgaaaa catcctgaag gctttggaac tgccctaccg
     9181 cgtgattacc ctgtgtaccg gcgacatggg cttcggcgca accaaaacgt atgatttgga
     9241 agtttgggtg ccggcgcaaa atacctaccg cgaaatctca agctgctcca actgcgaaga
     9301 tttccaagcc cgccgcatga aggcgcgttt caaagacgaa aacggcaaaa accgcttggt
     9361 acatactttg aacggctccg gcttggctgt cggcagaacg ctggtcgccg tattggaaaa
     9421 ccatcaaaac gccgacggca gcatcaacat ccctgccgca ctgcaaccgt atatgggcgg
     9481 cgttgccaag ttggaagtga aataagtttg caagctgcct gaacgtcaaa tgccgtctga
     9541 aacctggttc agacagcatt tcctttaaac ttttaaaaca cgtcagccgt cggcacgaac
     9601 cgcattgccg caatcgccgg tctgtccgac ctcgcggata ttggacagcg taacttccga
     9661 aatattaccc aacgcctctt ccgtcaaaaa cgcctgatgt ccggtaaaca gcacattatg
     9721 acaagacgac aggcggcgga acacgtcgtc ggtaatcaca tcgttggatt tgtcttcaaa
     9781 aaacaattcg cgttcgttct cgtacacgtc catacccaat gcgccgattt tccggcgttt
     9841 caacgcctca atcgcggcag aactgtcaat cagaccgcca cggctggtgt tgataatcat
     9901 cacaccgtct ttcattttgt cgaacgccgc ttcgttcagc atatagtggt tttccggcgt
     9961 ggcggggcaa tgcagcgtga tgatgtccga ctgggcatac agctcgtcca aatccacata
    10021 cctgccgccg attttttccg cttcggggtt gcaaaacgga tcgtgagcca gcaggttcat
    10081 gccgaaaccc tttaaaatcc gcatggttgc aataccgatt ttccccgtgc cgataacgcc
    10141 cgccgttttg ccgtacatat tgaaaccggt cagaccttcc agcgaaaaat tcgcatcgcg
    10201 ggtacgctga taggctttgt ggatacggcg gttcaaagtc agcatcagac cgaccgtatg
    10261 ttccgcaacc gattcgggcg aataggcagg cacgcgcacg actttcaagc ccaactcttc
    10321 agccgccttt aaatccacat tattgaagcc ggcacaacgc aacgccacag ttttcacgcc
    10381 aatttgcgcc aatttttcca acacgggccg gctgccgtcg tcgtttacaa aaatacaaac
    10441 cgcttccgcg ccttccgcca ttttcgccgt tttcgcatcc agcataaaat caaaaaactc
    10501 cagctcgaag ccgaaatgcc ggttggcgcg ggtaaaatgt tcgcggtcat aacttttcgt
    10561 accgtaaatc gcaatcttca tcaatatgtc cagttgtcgc ctatggttga gaaacggcat
    10621 aatacactga attcaaacaa atcagtagaa tatggcgaat taaaattgat tgcatgcacg
    10681 gcatttccat ttcaaaacac aaaactcaat cgcccatcgc cgccagaagt tctgcctgat
    10741 gttcggcaat cagggcattg gtgatttctg ccaaatcgcc gtccatcacg aaatccagct
    10801 tgtgcagggt aaggttgatg cggtggtctg ttaccctgcc ttggggatag ttgtaggtgc
    10861 ggatgcgttc gctgcggtcg ccgctgccga tgagggattt gcgttcggcg gcttctttgg
    10921 cttgggcttc gcgtttttgc gcgtcgttca ggcgggcggc gaggactttc atcgcctgcg
    10981 ctttgttggc gtgttggctg cgtccgtctt ggcattcgac caccatgcct gtgggcaggt
    11041 gggtgatgcg gacggcggaa tcggttttat tgatgtgctg cccgcccgcg ccggatgcgc
    11101 ggaaggtgtc gatgcgaagg tcgacggggt tcaactcgat gtcttccagt tcgtccgctt
    11161 cgggcatgac ggcaacggtg caggcggaag tatggatgcg gccttggctt tcggtggcgg
    11221 ggacgcgctg cacgcggtgt ccgcccgatt caaatttcaa acggctgtac gccccgagtc
    11281 cgacaatacg ggcgatgact tctttatagc cgcccaactc gctttcgttg gcggaaacga
    11341 tttcaacctg ccagcggttg cgttcggcgt agcggctgta catacgcagc aaatcgccgg
    11401 caaacagcgc ggcttcgtcg ccgcccgttc cggcgcgtat ttcgatgaag atgtttttgt
    11461 cgtcgtcggc atctttgggc agcagcagtt tttgcagttc ggtatcgagc gtgttgattt
    11521 tggcttttgc cgcttcgatt tcttcggcgg caaagtcttt catttcgggg tcggacagca
    11581 tttcttcggc atctgccaag tcgctttgcg ccagttgata gttttggaat acttcgacga
    11641 cgggggtcag ttcggcgtgt tcgcgcgtga gcttgcggta gttgtccata tcggatgtgg
    11701 cttcgggttg ccctaaaagg tgggtaactt cttccaaccg gtcgccgagt tgttgcagtt
    11761 tttctaagat agacggcttc ataattcttc cataacaaac gccgcctgaa tttcagacgg
    11821 catcaaaccg cggtcattat aatatatttt ctgaatattc aaaaagataa tctagggacg
    11881 gagcaggctg tcggcattgc gttccgttat cgcggcgatt tccgccgcgc cggtaccgcg
    11941 tatctgcgcg gcaatttcgg caatccgaag aatgttggca ggcgtattga cggtgttttt
    12001 caacataaac gggctatccg tttccaatac gaaatccccg tcgttcaagg ctttaagcgt
    12061 atcgcgcact ttacgcgcgt tcgggttgag cagcagcgaa ccgatgccga ttttgaaacc
    12121 cagtttcgcc aacacgtgcg cttcttcaat actgccggaa aaggcgtgga caatgccgcc
    12181 ccaggtaaag cccgtccgtt tgacggcggc ggcgatgtcg gcggcggctt tgagattatg
    12241 gataatcacg cgccgacgca gggtttgcgc gatttcaagc tggcggctga agacttggat
    12301 ttgccgttcg cgctgctgcg gcgtttgggt tttgtcgtaa aaatccaagc cgatttcgcc
    12361 gacccatgcc tgcggataac gtgccaacat cgcttccagg cggacgcaat cacgctcggc
    12421 aatgccgtct gaaaaccaag gatggatgcc gagcgcaata cggatttgac cgtgttcgga
    12481 cggcatttcc gacagttccg ccacgctttg ccaatcctgc ggacaggtgg cgggaacgat
    12541 aaaccgcttc accccaactt tccgcgcggc ggtcaggatg tgcggcaggt tttcgcgcag
    12601 ggcggcatcg gcaaggtggc agtgggtgtc ggtgaagttc atttcgattc cgcaatgcgg
    12661 caggttcaca taaaaataag gcagggcggc aagggatgcc gtgtacgggc ggcgcataag
    12721 gcgcggtcaa cgccccgtca ttgccatttc aatccgctat aacttcagtc ttgccaactc
    12781 tttttctaca tcttccgcgc cccagccttg cgatacggcg agggtcatca gcgcggtggc
    12841 ggtttcgagg ttgcatttgc cgccgttgat gatgcccgag ttgcggaacg cattgccttg
    12901 cgcgtaaacg gcggcagttc tgccttgtcg gacttggctg atgttgagca acaattttcc
    12961 ttgccgcgtg aagtctcgga cagcgcggat aaagccttcg tctgcgggcg tgttgccgtg
    13021 tccgtaactt tgcaggataa gggcgtgggc gggaagctgt ccgagtccgt cggcaagttc
    13081 ttggacggca aagccgggga taagcgtgcg gacggcgatt tttgcctgcg ggtcgggata
    13141 acggattttg aggccgtctg aaacatctgc cgtgtcctga ttcgggatgc ggacattgtg
    13201 ccagccctgg gtttcgtccc actccgccag tgcgccgaaa tgcggattgt cgaaaccggc
    13261 ggcggtttcg gtgctgactt tgctgctgcc gacggcggga taaagtttgc cgtcaaaggc
    13321 aataagcgtc tgcttcaatc cgagtgggaa tgcggcaacg gcagtcgcca gattgcgcgg
    13381 cgcgtcgctg cccacggcgt tgtacggcca ttgggagccg gtcaggacga ttggcttgtc
    13441 caaaccctgc agcgcgaggg cgaacagatt ggcggtatag gcgagcgtgt ccgtgccgtg
    13501 cagcaccaaa acgccgtcgt actgcggcag cgcggcggca atgatgtcca gccaagcgca
    13561 ccagttttgc agttggacgg cggaagaatc aatcagcgtc ccacaaacgt gccaatcgaa
    13621 atccatgccg tttgaaaacg gcgcgagtgc ctgcccgacc agcgcggtat cggggcgcag
    13681 gccttcgctg ctttgcgtca tgccgatggt gccgccggta taaaggacaa aaattttctg
    13741 tttcatggct catcctgaaa atgcaaagac cgcctgaaac gcgaaatgcg tccggacggt
    13801 cgaaaatctg atttactgct gcttctgtgc cgcttttttc gctgcctttt ccgccttgcg
    13861 tttggcgcgt ttttcgctca attgtgcgcg gtaaagctga taatgtcggc gtttgcgcca
    13921 ccagaaccac gccagcgccg ccgccagcac gcccaatgcg atgaagatgc cggattgcag
    13981 gctgtgcatt ttcgccatca gccaatcgat gttgtgcgcg ccgtactcgc ccaagtaaat
    14041 ccaaacgggc acggaaatca gcgcggcaag cccgtccata atcagaaagc gcagatacga
    14101 tactttgcgg ctgatgccgg cggtaacgaa aacggcagtc cgcaaacccg gcaggaaacg
    14161 agcgacaaat aagacccagt taccatattt gtcgaatttt tcctgaacct gctcataacg
    14221 tttcggcgtc atgatacgcg caataggttt gaaccttagg attttctgcc cccaaattcg
    14281 tccggcggcg aacatgatgc cgtccccgac caatacgccg agcataccaa ctgcaaacat
    14341 aatatgcgga ttggtataac ccatacccga aatcacgccg cctgttacca aggtcaaatc
    14401 ctcgggaatc ggcacgccga aaccgcagat gaccaataca aaaaaaacag ccgcataacc
    14461 gtattcgaca aaaaaagctt ctaaaaaagc aaacatggcg gatattccat tgtcggagat
    14521 aaaaagtcag aacaaaccga aacattttct acatgaagca ggcattctat caaagattat
    14581 gccgtctgaa agcggaaaaa aagcagattc gcgcatcctc cgcatgttca gacggcattt
    14641 aaacagaaaa ccggccggtt ctaaaaacgg tttttcctga ttttgcctaa aggctgccga
    14701 tggcggaagc aatacgttcc gccccttcgc gcgcccaatc ggcctgacgc gcctcaacca
    14761 tcactcgcac gacgggttcg gttcccgaag cgcgcaacac aacccttcct ttgccttcga
    14821 gttctttttc cacttcggcc aacacgtctt tcgaagcctc ctgccatttc tgaccttttt
    14881 ggatgcgcac gttaatcata gtttgcggat acggctgcca gtcggcgcaa acggtggcga
    14941 ggtcttggtt caggatttgc agcgccgcca aaacttgcag cgcggaaata atgccgtcgc
    15001 cggtgttgtg tttgtccatg cacaaaatat ggccgctggc ttcgcctccg atgagccagc
    15061 cgcgttggtt cagctgttcc aacacatagc ggtcgccgac tttggcgcgg cagaaatcga
    15121 cgccctgctc tttcagggcg atttccatcg ccatattggt cataaccgtg ccgaccacgc
    15181 cgccgatgtt gataccttct cgggctcggg ctttggcgat gacgtaaatc aggctgtcgc
    15241 cgtcgtaaac cttaccgttt ttatcgacca tcatcaggcg gtcgccgtcg ccgtctaagg
    15301 cgatgccgta gtcggcttca tgctgtaaaa cggctgcctg gagtgtcttg gtataagtcg
    15361 caccgcattt ttcattgata ttgtagccgt tgggttcgtc gccgatactg acgacctgtg
    15421 cgcccagttc gtgaaacacc ttgggtgcga caccgtaccc cgcgccgttg gcggtatcga
    15481 taaccaactt caaaccccga aggtcggaat ggctgggaaa ggtggatttg caaaattcga
    15541 tatagcggtc gtccgcaccg ctgatgcggc gtgcgcgccc gaggcgtgca gaaggctggg
    15601 ttttcatttc ttcgtcgatt ttggcttcga tttccaactc gatttcatcg gaaagcttca
    15661 cgccgccctc ggcaaagaat ttaatgccgt tgtcggaata ggcattgtgc gacgcggaaa
    15721 tcatcacacc ggcggataaa cgcagcgcac gggtcagata agccacgccg ggcgtaggca
    15781 gcggaccggt ttggataacg ttgacacctg cggcggtaaa acctgccacc aaagcggctt
    15841 ccagcatata accggaaata cgcgtatcct tgccgattaa aacggtcggt ttctggtcgg
    15901 tgtcgtgctg aaccaaaacc tgacccgccg catagccgag tttcaataca aaatcgggcg
    15961 taatcggaaa ctgcccgact tcgccgcgca cgccgtccgt gccgaaatat ttttttgcca
    16021 tgtgttgctc cgagaatgtg aaccgttgtc cgagattata cagtcagttt gtgccttgct
    16081 gtctgcaccg ttgatgccgt ctgaagccgc cccgcccttt tcagacggca tgaagtatgt
    16141 gaaccgctgt ttacagattg atgcccaacg cttcccacac tttcaacgca tccgccgtcg
    16201 ccttcacatc atgcacccgc acgatttgcg cgccgcgcgc cacggaagcc agcgccgccg
    16261 ccacgctgcc gtgtacgcgt tccgccgcgt cggtttcgcc ggtcagctcg cctatcgtgc
    16321 tcttgcgcga cacgccgacc agcagcggca aaccggtttc cgccatcaat tcgggcaaat
    16381 gccgcatcag cgcgatattg tgttgcaggg ttttgccgaa gccggagccg aaacccggat
    16441 cgagcgtgat gcgttgcggt gcgatgcctg ccgcgacaca ttccgccgcc cgagctttca
    16501 aataccgcgc cacttcaccg acaacatcct gatatttcgg attaatctgc atgttttcag
    16561 gcaaaccctg catgtgcatc aggcaaatgc ccgtgtccgc ctgacgcgcc agcaattcga
    16621 ccgcgccttc gtcagtcaac gccgccacat cgttaataat atcgatgccg ccgagtgcca
    16681 atgctttttc cataaccacc gtgcggcgcg tgtccaaact gacgggaaca ccccaccccg
    16741 ccacttccgc caatacaggc tcaacccgcg cccattcttc ttcaggcgaa acataatccg
    16801 cgcccgcccg cgtcgattcg ccgccgatgt cgagaatgtc cgcgccctct ttcaaaagcc
    16861 gttcggcatg tgccaaagct gtttgggcgt tttgcgaata cgcgccgccg tcggaaaaag
    16921 aatcgggcgt gagattcacg atacccatga ttttcggttt gtccaaaccg atttcaaacc
    16981 gtcctgcctg ccaaacgtgt cgtgccatct gaactcctcc caaaataaaa aaaca
//
LOCUS       DAWKJW010000022        17012 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.022, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000022 DAWKJW010000000
VERSION     DAWKJW010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17012)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17012)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17012
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.022"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(306..1718)
                     /gene="trkA"
                     /locus_tag="WJJ54_000591"
     CDS             complement(306..1718)
                     /gene="trkA"
                     /locus_tag="WJJ54_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HEZ7341485.1"
                     /translation="MKILILGNGQVGSTVAQNLAAIPNNDVTVIDIDEKALQETGSRL
                     DVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRS
                     SEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRV
                     RMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEIL
                     FAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAE
                     WIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRV
                     IGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVV
                     AHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAETGETIMGHHTETVIQDGDHIIFFVS
                     RRRILNELEKLIQVKMGFFG"
     gene            complement(1816..3339)
                     /locus_tag="WJJ54_000592"
     CDS             complement(1816..3339)
                     /locus_tag="WJJ54_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HEZ7341486.1"
                     /translation="MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAA
                     KDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAY
                     TWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGDKVEVTCAAKGGGSENKSKLA
                     MLNPSDNIVDWVLKTIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQ
                     EKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAM
                     IPNCAATRHVEFELDGSGPVELTSPRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKT
                     GDVLLLNGKILTGRDAAHKRLVDMLNKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAG
                     PTTATRMDKFTRQMLEQTDLLGMIGKSERGVATCEAIADNKAVYLMAVGGAAYLVAKA
                     IKSSKVLAFPELGMEAIYEFEVKDMPVTVAVDSKGESIHATAPRKWQAKIGIIPVES"
     gene            complement(3646..4452)
                     /locus_tag="WJJ54_000593"
     CDS             complement(3646..4452)
                     /locus_tag="WJJ54_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEZ7341487.1"
                     /translation="MNMKKWIAAALACSALALSACGGQGKDAAAPAANPDKVYRVASN
                     AEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMS
                     GVTITDDRKQSMDFSDPYFEITQVVLVPKGKKISSSEDLKNMNKVGVVTGYTGDFSVS
                     KLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPDF
                     TTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEDGQAAK"
     gene            complement(4504..4755)
                     /locus_tag="WJJ54_000594"
     CDS             complement(4504..4755)
                     /locus_tag="WJJ54_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341488.1"
                     /translation="MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPAETAEIA
                     VESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER"
     gene            4855..5616
                     /locus_tag="WJJ54_000595"
     CDS             4855..5616
                     /locus_tag="WJJ54_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341489.1"
                     /translation="MDVNKEPNWEKRLENLRQTRRMKAVPTYAPLSRPSETGTDAPVP
                     KLDDESRDHVLKAYLKKWQEEHNAAVADCGEEVETDPMIVLQENWLNAQASLQMSVSE
                     KHIESRRRILFDAKKDSAEFETGQIEGGENADAAESGTAADGVAENGEGGAEEALMPV
                     QINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGIIRTAVQKQMAVFTYQL
                     QQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR"
     gene            5761..6930
                     /gene="metZ"
                     /locus_tag="WJJ54_000596"
     CDS             5761..6930
                     /gene="metZ"
                     /locus_tag="WJJ54_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HEZ7341490.1"
                     /translation="MSKKLHPQTLAIRGGKEQTGYREHNQALFLTSSFMWDNAQHAAD
                     LFSKKIKGFTYTRTANPTTAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGDH
                     VVSSRSLFGTTVGFINNIVTKFGIEVSHVSPTDINEWKAAVKANTKLLFLETPSNPLG
                     EVADLEALAELAHGIGALLVVDNSLLSPVGSQPLKHGADISVSSATKAIDGHGRVMGG
                     VLAGSEELMAQVAMYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALKIAQWLQA
                     QPQVQAVYYTGLPDHPQVALIRKQQNGGGIVIGFEVADQEAAWKVVDGVELFSRTANL
                     GDVRSTITHPWTTTHGRMQPEEKLAAGIRPGLVRLSVGLEYVGDLVDDLKQALAR"
     gene            7025..7231
                     /locus_tag="WJJ54_000597"
     CDS             7025..7231
                     /locus_tag="WJJ54_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2788 domain-containing protein"
                     /protein_id="HEZ7341491.1"
                     /translation="MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIVILF
                     LVLGLGVFGFVFKELLIKFLVLPK"
     gene            complement(7329..7441)
                     /locus_tag="WJJ54_000598"
                     /pseudo
     CDS             complement(7329..7441)
                     /locus_tag="WJJ54_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(8278..9030)
                     /locus_tag="WJJ54_000599"
     CDS             complement(8278..9030)
                     /locus_tag="WJJ54_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ7341492.1"
                     /translation="MTDILIDNTATEAVRALIQAFPLVPVSQPPEQGSYLLAEHDTVS
                     LRLVGEKSSVIVDFASGAAQYRRTKGGGELIAKAVNHTAHPTVWDATAGLGRDSFVLA
                     SLGLAVTAFEQHPAVACLLSDGIRRALLNPETQDTAARITLHFGNAAVQMPALVQTQG
                     KPDIVYLDPMYPERRKSAAVKKEMTYFHRLVGEAQDEAVLLHTARQTAKKRVVVKRPR
                     LGEHLAGQAPAYQYTGKSTRFDVYLPYGTDKG"
     gene            complement(9134..9601)
                     /locus_tag="WJJ54_000600"
     CDS             complement(9134..9601)
                     /locus_tag="WJJ54_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="HEZ7341493.1"
                     /translation="MTELQHPVLVVDNETDILDLMEMTLMKMGLRVHTASGVAEAKNK
                     LDSQRYSLVLTDMRMPDGSGLEVVQHINSRLLDTPVAVITAFGNADQAQEALRCGAFD
                     PDTMQIQDYLDQIERDIIEQTLKQTEGNRTQAAKRLGISFRSMRYRMERLNIG"
     gene            complement(9653..11170)
                     /locus_tag="WJJ54_000601"
     CDS             complement(9653..11170)
                     /locus_tag="WJJ54_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEZ7341494.1"
                     /translation="MVISNPRELEKLKDQIPNLINIARIATVLPLLIMHIFGLEVSGH
                     ENLHVSWTTWAFYLWLAISCWMIFFSTLNPQWQWQALKIPSFSAVSDITMIGILTYLF
                     GGINSGFGILILPFVGSSCLLSYGRYPLLYASYAAILLILNALADSNINMYPLILDAK
                     TVTNTFVLVTGSYFVAMIASLSVRYIDRAGKLAHENHAAYRRIRGLNQIVLNRVQEAV
                     VIINVEYQTVLFNKKAKDLLPTLEIGQHTALFDPITVLWDKAPSRTFERNIDTPALTA
                     RIRAVPMNKEQNKLLILYIRPQSEIQAEALSVKLAALGQLTANIAHEIRNPMSAIRHA
                     NDLLRENAEEEETDPFKVKLCEIIDGNVRRIDKMLEDISSLNKRNKTERETIGLIPFW
                     EEFKQEFLLGHPDAAGCIRLDMQGNHPTAYFDPAHLRQIMWNLANNAWRHSRKQPGSI
                     SVTIRPAQKNTVCILFADRPKCRNTCSNPFTPRRKTAPASGCMSPANWHMPTSAI"
     gene            complement(11191..13494)
                     /gene="parC"
                     /locus_tag="WJJ54_000602"
     CDS             complement(11191..13494)
                     /gene="parC"
                     /locus_tag="WJJ54_000602"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HEZ7341495.1"
                     /translation="MNMQPHAPHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDG
                     QKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTL
                     RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEP
                     LHLPARLPMVLLNGASGIAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPA
                     PDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAK
                     ILAEIEEQTNPKPKAGKKQLNQDQLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSR
                     IDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRTVTVTRRLK
                     FRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKADLMAAFGLTEIQAEDILEIR
                     LRQLARLEGFKLEKELNELREEQGRLNILLGDENEKRKLIIKEMQADMKQFGDARRTL
                     VEEAGRAVLTQTTADEPITLILSEKGWIRSRAGHNLDLSQTAFKEGDRLKQTLEGRTV
                     LPVVILDSLGRTYTLDAAEIPGGRGDGVPISSLIELQNGAKPVAMLTGLPEQHYLLSS
                     SSGYGFITKLGDMVGRVKAGKVVMTADSGETVLPPVAVYASSFINPDCKIIAATSQNR
                     ALAFPIGELKIMAKGKGLQIIGLNAGESMTHTAVSSELEILIESEGRRGAAHKDRIPI
                     SLLEAKRGKKGRLLPISGSLKQLSSPK"
     gene            13791..14474
                     /locus_tag="WJJ54_000603"
     CDS             13791..14474
                     /locus_tag="WJJ54_000603"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HEZ7341496.1"
                     /translation="MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKE
                     NGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGQLQGLDKKQTAE
                     QYGDEQVRIWRRSYDTLPPLLDKDDEFSAHKDRRYAHLPADVVPDGENLQVTLERVLP
                     FWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDKDIMGLEIPTGQPLVYKLDDN
                     LKVIEKFYL"
     gene            complement(15075..>17012)
                     /locus_tag="WJJ54_000604"
     CDS             complement(15075..>17012)
                     /locus_tag="WJJ54_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ7341497.1"
                     /translation="ISPEIFGTLFQSVMDAQERREAGAHYTETANIDKVINGLFLENL
                     RAEFEAVKAFKRDKAKKLAAFYQKIQNLQFLDPACGCGNFLIVAYDRIRALEDDIIAE
                     ALKDKAGGLFDSPSVQCRLKQFHGIEIDEFAVLIARTAMWLKNHQCNIRTQIRFDGEV
                     ACHTLPLEDAAEIIHANSLRTPWQAVDYIFGNPPFIGSTYQTKEQKNDLESICGHIKG
                     YGLLDYVCNWYVKAAGIMAQHPQVQTAFVSTNSICQGQQVEILWGSLLNQGIEIHFAH
                     RTFQWTSQAAGKAAVHCIIVGFRQKPPMPSEKTLYDYPDIKGEPVKHAAANINPYLID
                     APDLIIAKRRTQISGEIEMLYGNKPTDGGNLILSTAEKDALIAAEPLAEQYTRPFVGA
                     EEFINGKTRWCLWFHGVSDVKRNHDLKQMPQVQARIQAVKTMREASSDKQTQKDAATP
                     WLFQKIRQPSDGNFLIIPRVSSESRRFVPIGYLSYETVVSDLVFTLPNASLYHFGILS
                     STMHNAFMRTVAGRLESRYRYSNTVVYNNFPFPESCRMPSENDRQDPLRSAVETAAQA
                     VLDARGQYRREAREAGLPEPTLAELYAPDAGYTALDKAHAALDKAVDKAYGYKTGKNT
                     DDEAERTAFLFELYRKAAAIA"
BASE COUNT         3523 a         4150 c         5104 g         4235 t
ORIGIN      
        1 tctttgaata ttgctgttgc ccaatggttt ggattcccgc aacctttcgt cattcccgtg
       61 gaaacgggaa tctagaatct ctaaagcttc agctaacctt tgaatattgc cgctatccca
      121 aggtctggat tcccgcctgc gcgggaatga cgggtctttt ataacctttg aatattgccg
      181 ctatcccaag gtctggattc ccgcttacgc gggaatgacg gggagggcgg atgccgtctg
      241 aagcccacct accattattt ctgcttccat accgcttggc ggcaatatgt ccggaatggg
      301 gcggtttatc cgaaaaagcc cattttgacc tggatgagtt tttccagttc gttcaggatg
      361 cgccggcgcg agacgaaaaa gatgatgtgg tcgccgtctt ggatgacggt ttcggtatgg
      421 tgtcccataa tggtttcgcc ggtttcggcg cggacgacgg cggcaatgtg gcagccttct
      481 ggccatttga taccgctgat gcgcctgccg atgatggcgg aagttttttt gtcgccgtgt
      541 gcgacgactt cgatggcttc cgccgtgccg cgccggatgg ggtggacggc aacgatgtcg
      601 ccgcgccgga tgtgggcgag tatcgagccg atggtgatga ggtgggggga gacgacgatg
      661 tcgattttgt tgccttcgag caaatcgacg tagcttgagc ggttgacgat gccgatgacg
      721 cgcttcgcgc cgaggttttt cgccaaaagg gcggacataa tgttgctttc gtcgtcgttg
      781 gtcagggcgc agaatacgtc gatttcgtcg atgtattcgt tgtcgagcag ggtttcgtcg
      841 gttgccgaac cttgcaggac gagggtgttg tcgaggtttt cggctatcca ttcggcacgg
      901 cgcggccggc attcgatgat tttgacgttg tatgcgtgtt cgagctgctt ggcgagacgg
      961 tagccgatgt tgccgccgcc ggcaatcatg atgcggcggg tgctggtttc tttggggcgc
     1021 aattcgggta tgaccgcgcc gatgttttcg gcggcggcgg caaacaggat ttcgtcgcct
     1081 tcgatgatga cggtttgcgg cgcggggacg atgaggcggt tgttgcggta aacggcgcag
     1141 atttggcagt cggccccgtc gggcaaatct tgggcgatgt cggcaatgct gcgtccgaca
     1201 agcagtccgc cgcgccgcgc ctgtatgatg accatccgca cgcggtcgtc tgcaaaacgt
     1261 aaaacctgca atgcgcccgg gcagtctatc aggccggcaa gctgttcggt aacgagctgt
     1321 tcggggctga tggtttcggt tatgccgaat atggaaaggc tgccgttttc gttgttttcg
     1381 agcttggggc tgaggtattc gaggtattcg ctggaacgga cgcgcgcgat gcggccgggg
     1441 atgttgaaca ggtcggcggc aactttgcag gcgacgatgt tggtttcgtc gctgcgggag
     1501 agcgcgagca gcaagtcggc atcttccgcg ccggcgcgtt ctaatgtgaa gggggatgcg
     1561 ccgttgccga aaacggtttg gacatcgagg cggctgcctg tttcctgcaa tgctttttcg
     1621 tcgatgtcga taacggttac gtcgttgttg ggtatggcgg caaggttttg tgcgacggta
     1681 gaacctacct gtccgttgcc taaaatgagg attttcacgg tgtgggtcgc cgagtgatga
     1741 aatggtggat tgtaccgcaa ccgggggcgg aaatgccgtc tgaaggcaga ttttgtgttc
     1801 agacggcatg gggcctcaag attcgacggg gatgatgccg attttcgcct gccatttgcg
     1861 cggggcggtg gcgtggatgg attcgccttt gctatctacg gcgacggtta cgggcatgtc
     1921 tttgacttca aattcgtaaa tggcttccat gcccaattcg gggaacgcca agactttgga
     1981 agatttgatg gcttttgcca cgagatacgc cgcgccgccg actgccatga ggtacacggc
     2041 tttgttgtcg gcgatggctt cgcaggtggc cacgccgcgc tcggatttgc cgatcatgcc
     2101 caagaggtcg gtttgttcga gcatttggcg ggtgaatttg tccatgcggg tggctgtggt
     2161 cggacctgcc ggaccgacga cttcatcgcc gaccggatcg acgggaccga cgtagtaaat
     2221 caggcggttg gtgaaatcga cgggcaattc ttcgcctttg ttgagcatat cgacgaggcg
     2281 tttgtgtgcg gcatcgcggc cggtgaggat tttgccgttc aacagcaata cgtcgccggt
     2341 tttccagctt gccacttctt ctttggtcag cttgtcgaca tcgacgcgtt tgccgttgtc
     2401 ggggctgtaa gtcaaatcgg gccagtcttc gacgcgcggc gatgtgagtt cgacagggcc
     2461 tgagccgtcc aattcgaact cgacgtggcg ggtggcggcg cagttcggaa tcatggcaat
     2521 cggtttggag gcggcatggg tcggataatc gaggattttc acgtccaaca cggtggtcag
     2581 tccgcccaag ccttgtgcgc cgatgcccag cgcgttgact ttttcaaaga gttcgaggcg
     2641 cagggcttcg gtggtggaca attctgcgcc ggacgcggct ttttcctgca attcttggat
     2701 gtcgatgtgg ctcatcaggg actcttttgc catcaacacg gctttttcag gcgtgccgcc
     2761 gatgccgatg cccaagatgc cgggaggaca ccagcccgcg cccatcgtcg gaatggtttt
     2821 caatacccaa tcgacgatgt tgtcggaagg gttgagcatg gcgagtttgg atttgttttc
     2881 agaaccgccg ccttttgccg cgcaggttac ttcgactttg tcgcccggca cgatgctcat
     2941 atgaatgacg gcgggggtgt tgtctttggt gttttgacgt ttgccggccg gatcggcgag
     3001 gacagaggcg cgcagggtgt tgccttccca agtgtaggcg cggcgcacgc cttcgttaac
     3061 catttcttcc acgctcatgt ccgcatccca ctgcacatcc ataccgactt tcaaaaacac
     3121 ggttgcgata cctgtgtctt ggcagatggg gcggttgttt tcggcacaca tgcggctgtt
     3181 gaccaaaatc tgcgtcatcg cgtctttggc ggcggggttt tcttccttct gccacgcttt
     3241 atagagcgcg tcgatgtagt ctttgggatg gtagtagctg atgaattgga aggcatcgca
     3301 aatgctttgg ataaagtctt cctgtttgat gacggtcatg attgtgttcc ttttcaaggt
     3361 tgtggcggta agtgtctgct gctgttttaa acaacctttt tgaaagctgt tttttatcag
     3421 gttgaaatag tgccagcgtt tgtacggtaa agacaataca taattctaat ctcttgatta
     3481 tcaatttgtt ttaataaaat actgttttac tgggattttg atatttgtaa tctttgcctg
     3541 ttgctttgcg gtagggagaa atcagcaggc agttcattgt aggccgattg atgaacaatg
     3601 ccgtctgaaa gggcttcaga cggcattgtg ttcggacggg cgggcttatt ttgcggcctg
     3661 tccgtcttct tttgcaaaat atttggcgta aatcttgtcg tattcgccgc tttcgcgtac
     3721 tttttccaac gcatcgttca gcattttgac ggttgcttcg tcgcctttgc gtaccgcgat
     3781 gccgtagtgt tcggtggtga agtcgggcag ggtaacgaag tccattcctt tggtcggatt
     3841 gtttttcaca taattggcga tgaccgcgct gtcgctgact acggaatcta agccgccgtt
     3901 ttccagttct ttgataatca ggggaacgtt ttcaaagcgc gcgattttcg ggttgtcgtt
     3961 gcccaagagt ttggatacgg agaaatcgcc cgtgtagccg gttaccacgc cgactttgtt
     4021 catgtttttc aaatcttcgg aagaagatat ttttttgcct ttcggaacga ggacgacttg
     4081 ggtgatttca aaatacgggt cgctgaagtc catagactgt ttgcggtcgt cggtaatggt
     4141 tacgcccgac atcacaacgt ccgcatcgcc gttgttcaag gcggggaaaa ggctgtccca
     4201 cggctggtgt ttgaattcga ttttaaaatt gcccgccttc gccatcgcgt tcatcaaatc
     4261 cacatcgaaa ccttcgacat tgcctttcga gtctaaagat tcaaaggggg caaactcggc
     4321 gttggaagcc acgcggtaca ctttgtcggg gtttgcggcg ggcgcggcgg catctttacc
     4381 ctgaccgccg caggcagaca gcgcgagcgc ggaacaggca agggcggcgg caatccattt
     4441 tttcatattc atcaaaattc ctttcggtaa tcaaaaagcc taaaaaatca gtttaacata
     4501 aaattaacgt tctttttcac ggaaaaacgc ataagtaacg tcgtggaaca aatcggtatg
     4561 ggggctgtcc tcatagctca attctgccaa ggcgtcctca aaagcaagct gaatcgactc
     4621 gaccgcgatt tcggcggttt cggcgggaag ggcgcggatt aaggctttga atgcggtgga
     4681 caggacgtgg ttctgcatac gcagcacgtc gttcgcctct tccagatatt ccaaacgctg
     4741 ttcgatgctg cccatgatgt atcctcgcga atctgttaaa atgcgccatt atatcaaacc
     4801 gcgctttggg cgcgggtttg tctgcctgca aagattaaga accggaagcc gaaaatggat
     4861 gtgaataaag agccgaattg ggaaaaacgt ttggaaaacc tgcgtcagac gcgccgtatg
     4921 aaggcagtgc cgacttacgc gccgctgtcc cgcccctctg aaaccggaac ggacgcgcct
     4981 gtgccgaaac tggacgatga gagccgagac catgtgttga aggcgtatct gaaaaaatgg
     5041 caggaggaac acaatgccgc cgttgccgat tgcggcgagg aagtcgaaac cgacccgatg
     5101 attgtccttc aggaaaactg gctcaacgcg caggcttccc tgcaaatgtc ggtttcggaa
     5161 aaacacatcg aatcgcggcg gagaatcctg ttcgatgcca aaaaagacag tgccgaattt
     5221 gaaaccggac agattgaagg cggggaaaac gccgatgcgg cagaatcggg tacggcggca
     5281 gacggggttg cggaaaacgg cgaaggcggt gcggaagagg cgttgatgcc cgtccaaatc
     5341 aatatcctga acccgaaagc cgtcaaccgg cgcgaagtgt tctgcctgtc cgaacaggag
     5401 ctgaccgaac ggctgatcaa acgcctgcgc ccccatctga ccgataccgt caacggcatc
     5461 atccgtacgg cggtgcagaa gcagatggcg gtttttacct accagctcca gcagatgctg
     5521 cacgagcagg cgggggcggt agtcgaagac gtgttggaac acgatgtccg caaaatcctc
     5581 aacgacatca agtacgagtt aaaatacaaa cgctgaccgt catgccgtct gaaagccgtt
     5641 tcagacggca ttttcctgcc cgtccgactt gaaaggcgca cggaacgggc gcaaaatatt
     5701 aacaaattaa acaacgggcg cgcgccccgt ttttgaacgg acaaaaccga ggaatcaccg
     5761 atgagcaaaa aacttcatcc gcaaacgctc gccatacgcg gcggcaaaga acaaaccgga
     5821 taccgcgaac acaatcaggc cttgttcctg accagcagct tcatgtggga caacgcccaa
     5881 cacgccgccg atttgttttc aaaaaaaatc aaaggcttca cttatacccg taccgccaac
     5941 ccgaccacag ccgcctttga aaaacgcatc gccgctttgg aaggcgcgga acgcgcggtc
     6001 gccacttcga cgggtatgtc tgcgattcag gcggcgtttt tcaccttttt gcaggcgggc
     6061 gatcatgtgg tttccagccg cagcctgttc ggcacgaccg tcggctttat caataacatc
     6121 gttaccaaat tcggcatcga agtgagccac gtgtcgccga ccgatataaa cgaatggaaa
     6181 gccgccgtca aagctaatac caaactgctg tttttggaaa cgccgtccaa ccccttgggc
     6241 gaagtggccg acttggaagc tttggcggaa ttggcgcacg gcatcggcgc gctcttggtg
     6301 gtggacaaca gcctcttgtc tccagtcggc tctcagcctt tgaaacacgg tgcggatatt
     6361 tccgtttcct ccgcaaccaa agccatagac ggacacgggc gcgtgatggg cggcgtgttg
     6421 gcgggttcgg aagaactgat ggcgcaggtt gccatgtatt gcaactcttg cgggctggca
     6481 atgtcgccgt ttaatgcatg gcagttgttg agcggcgtag aaaccctgtc gctgcgtatg
     6541 gaaaaacagt tcgacaacgc cctgaaaatc gcgcaatggc tgcaagcgca gccgcaggtt
     6601 caagccgtgt attacaccgg attgcccgac catccgcagg tggcgcttat ccgcaaacag
     6661 caaaacggcg gcggcatcgt catcggcttt gaagttgccg accaagaagc ggcgtggaaa
     6721 gttgtggacg gcgtggaact cttttcccgc accgccaacc tcggcgacgt gcgctcaacc
     6781 attacccacc cgtggacaac cacgcatggc agaatgcagc ccgaagaaaa actcgccgcc
     6841 ggtatccgcc ccggattggt gcgcctgtcg gtcggtttgg aatatgttgg cgacctcgtc
     6901 gatgatttga aacaggcact cgcacgctga ttgcgtgttt cagacggcat cggcggaaaa
     6961 acaccgcaaa tgccgtctga aacccttatc ttatatggca tacacatcaa caatagggaa
     7021 aaatatggat gaagcggttt ttgccgattg ggcgttgaaa atctgcctga ccggtttgat
     7081 tatttttttg ggttttattg tttggaattt gggcaaggag tccaaagcag gcaaattcgg
     7141 catcgtcatt ttgtttttgg ttttgggctt gggcgtgttc ggttttgtgt tcaaagagtt
     7201 attgattaag tttttggtat tgccgaaata ggctgctgcc tgtcaaaatg ctgtctgaaa
     7261 tcataaaaag taatctgcac cctaaaagtt tgatttaacc gccaactgat taaggtgcgg
     7321 atttttatga caaaatatag tggattaaca aaaaccagta cggcgttgcc tcgccttgcc
     7381 gtactatttg tactgtctgc ggcttcgtcg ccttgtcttg atttaaattt aatccactat
     7441 aaaaatcatc tttccgcagt cattcccacg gatgcgaaag cctgtctttt tgaatcccgg
     7501 ataattttac atcgtcattc ccgcgcaggc gggaatccaa atcattgggt agcggcaatg
     7561 ttcaaaagtc gtctgaaaaa tcagaagttc tagattcccg ttttcacggg aatgacggaa
     7621 tttcagacgg catcctcccg ccccgtcatt cccgcgcagg cgggaatcta gtccgttcgg
     7681 tttcggtcat ttacgataaa ttcctgttgc ttttcatttc tggattccca cttccgtggg
     7741 aatgacggag gagcggataa attctcgcaa tctaaaacct tgtcatttcc ataaaaaaca
     7801 gcaacccgaa acagcaactt aaaaacagca acctgaaacc tcgtcattcc cgcgcaggtg
     7861 ggaatccaga tcattgggtg gcggcaatgt tcaaaagtcg tctgaaaaat cagaagttct
     7921 agattcccgt tttcacggga atgacggaat ttcagacggc atctgcccgc cccgtcattc
     7981 ccgcgcaggc gggaatctag tccgttcggt ttcagtcatt tacgataaat tcctgttgcc
     8041 tttcatttct agattcccac ttccgtggga atgacggttt ggaagttgcc tgaaactcga
     8101 aaacaactat agtggtttaa atttaaacca ctataaaact gaatgaatcg gattcccact
     8161 tctgtgggaa tgacaaactt taaggtgtga tgacttatcc aaaacagtcg aaacgcaaaa
     8221 accggtttct cgtttgcata agaacggcaa atttttcggt gtcttgtttt atgggcgtta
     8281 tcccttgtcc gtcccgtagg gcaggtaaac gtcgaagcgg gtgcttttgc cggtgtattg
     8341 gtaggcaggg gcttgtccgg caaggtgttc gccgaggcgg gggcgtttga cgacgacgcg
     8401 tttttttgca gtctgtcggg cggtatggag gaggacggcc tcatcttgcg cctcgccgac
     8461 gagccggtgg aagtaggtca tttctttttt aacggcggca cttttgcggc gttcgggata
     8521 catggggtcg agatagacga tgtcgggttt gccttgtgtt tgaacaaggg cgggcatttg
     8581 tactgcggcg ttgccgaaat gcagggtgat gcgcgcggcg gtgtcttgcg tttcgggatt
     8641 gaggagggcg cggcggatgc cgtctgaaag caggcaggct acggcgggat gctgctcgaa
     8701 ggcggtaacg gccagcccga gcgaggcgag gacgaagctg tcgcgcccca atcctgcggt
     8761 tgcgtcccaa acggtggggt gcgcggtgtg gttgacggct ttggcgatga gttcgccccc
     8821 gccttttgtg cgccggtatt gtgccgcgcc ggaggcaaaa tcgacgatga cgctgctttt
     8881 ttccccgaca agcctgaggc tgacggtatc gtgttcggca aggaggtaac tgccttgttc
     8941 gggcggttgg gaaacgggca caagggggaa tgcctgtatc agggcgcgga cggcttcggt
     9001 ggcggtgttg tcaatgagga tgtcggtcat ggtgttttgt gtccgttcgg gcgtggggcg
     9061 aacccgcttt gccgtgccgt ttcagacggc attttttcgg gtgggcggag atggtgcgga
     9121 tgccgttttg tcgtcagccg atgttgaggc gttccatacg gtagcgcatg gaacggaagc
     9181 tgatgcccaa gcgtttggcg gcctgcgtgc ggttgccttc ggtttgtttg agggtttgtt
     9241 cgatgatgtc gcgttcgatt tggtcgagat agtcctgtat ctgcatggta tcggggtcga
     9301 acgcgccgca acgcaacgct tcctgtgcct gatcggcgtt gccgaaggcg gtgatgacgg
     9361 caaccggcgt atcgagcagg cggctgttga tgtgttggac gacttccagc cccgagccgt
     9421 ccggcatacg catatcggtc aggacgagcg aatagcgttg gctgtcgagc ttgtttttgg
     9481 cttcggcaac gcctgacgcg gtatggacgc gcaagcccat tttcatcagg gtcatttcca
     9541 tcaggtcgag aatgtcggtt tcgttatcga cgacgaggac ggggtgttgc agttcagtca
     9601 ttggtttttt ccggtaatgc gagttcgaaa catttggctt cgggcaggta ggtcaaatcg
     9661 ccgaagttgg catgtgccag ttcgcgggcg acatacagcc cgaggccggt gccgttttcc
     9721 gccgtggtgt aaaagggttc gaacaggtgt tcctgcactt cgggcggtcg gcaaagagga
     9781 tgcagacggt gtttttttgc gcggggcgga tggtgacgga aatcgagccg ggctgtttgc
     9841 ggctgtgccg ccacgcgttg ttggcgaggt tccacataat ttgccgcagg tgggcgggat
     9901 cgaaataggc ggtcgggtga ttgccctgca tatccaagcg gatgcagccg gcggcatcgg
     9961 gatggccgag caggaactct tgtttgaatt cttcccaaaa cggtatcagg ccgatggttt
    10021 cgcgttcggt tttgttgcgt ttgttgagcg aggagatgtc ttcgagcatt ttgtcgatac
    10081 ggcggacgtt gccgtcgatg atttcgcaaa gtttgacctt gaacgggtcg gtttcttctt
    10141 cctctgcatt ttcgcgcaac aggtcgtttg catggcgaat ggcggacatg gggttgcgga
    10201 tttcgtgggc gatgttggcg gtcagttgtc cgagcgcggc aagtttgacg gacagggctt
    10261 ctgcctgaat ttcgctttgc gggcggatgt agaggatgag cagcttgttc tgctctttgt
    10321 tcatcggcac ggcgcggatg cgggcggtca gggcgggcgt gtcgatattg cgttcgaaag
    10381 tacgcgaagg ggccttgtcc cataaaacgg taatagggtc gaacagggcg gtatgctgtc
    10441 cgatttcaag cgtggggagc agatcttttg cctttttatt gaacagtacg gtctgatact
    10501 cgacgttgat gatgacgacc gcttcctgaa cgcggttgag cacgatttgg ttcaagcccc
    10561 tgatgcggcg gtaggcggcg tggttttcat gggcaagttt gccggcacgg tcgatgtatc
    10621 tgaccgacag cgaggcaatc atggcgacga aataggagcc ggtcacgagg acgaaggtgt
    10681 tggtgacggt ttttgcatcc aaaatcagcg gatacatatt gatattgctg tctgcaaggg
    10741 cattcaatat cagcaggatg gcggcgtagc tggcatagag cagggggtaa cgcccgtaac
    10801 tgagcaggca ggagctgccc acgaagggca ggatcaggat gccgaacccc gagttgatgc
    10861 cgccgaacag gtaggtcagt atgccaatca tggtaatgtc ggacacggcg ctgaaactcg
    10921 gtatcttcaa agcctgccat tgccattgcg gattgagggt ggaaaagaaa atcatccagc
    10981 aggaaatggc gagccacaag taaaatgccc atgtcgtcca tgagacgtgc aggttttcat
    11041 gcccgctgac ctccaacccg aagatatgca taatcagcag ggggaggacg gtggcgatgc
    11101 gggcgatgtt gatcagattg ggaatctggt ctttgagttt ctcaagttcg cgggggttgg
    11161 aaatcaccat aattatgtgt ggaatcgggt ttatttcggg gaagaaagct gtttcagact
    11221 gcccgatatg ggcaatagtc tgcctttttt gccgcgtttt gcctcaagca gggagatggg
    11281 gatgcggtct ttgtgcgccg cgccgcgcct gccttcgctt tcaatcagga tttccagctc
    11341 ggaagaaacg gcggtatgcg tcatcgattc gccggcgttt aatccgatga tttgcagccc
    11401 tttgcctttc gccataattt tcaattcgcc gatggggaag gcgagggcgc ggttttgact
    11461 ggtggcggca atgattttgc agtcggggtt gatgaacgag gaggcataga cggcaaccgg
    11521 cggcaaaacg gtttcgccgc tgtctgcggt catcaccact ttgcccgctt tcacgcgccc
    11581 gaccatatcg cccagcttgg tgatgaagcc atagccgctg ctgcttgata ataaataatg
    11641 ttgttccggc aatcctgtca acatcgcaac gggtttcgcg ccgttttgca gctcgatcaa
    11701 ggatgaaatc ggtacgccgt cgccgcgtcc tccagggatt tcggcggcat cgagcgtgta
    11761 ggttctgccc agtgaatcca agatgacgac gggtaaaacg gtgcggcctt cgagggtttg
    11821 tttgaggcgg tcgccttctt taaacgcagt ttggctcaaa tcaaggttgt gtccggcacg
    11881 gctgcgtatc cagccttttt ccgacagaat cagcgtgatc ggctcatcgg cggtggtttg
    11941 cgtcaacacg gcgcgtccgg cttcttccac cagcgtgcgg cgcgcgtcgc cgaactgctt
    12001 catgtccgcc tgcatctctt tgataatcag cttgcgtttt tcgttttcgt cgcccaaaag
    12061 gatgttcaga cggccttgtt cctcgcgcaa ttcgttcaat tctttttcga gtttgaaacc
    12121 ttccaaacgc gccaactggc gcaggcggat ttccaaaatg tcttcggctt ggatttcggt
    12181 cagcccgaac gccgccatca aatcggcttt cgggtcgtct gattcgcgga tgactttaat
    12241 cacttcgtcg atgtgcagaa agactttcag acggccttcg aggatgtgca gccgtttttc
    12301 cacttggttc aaacggaatt tcagacggcg tgttacggtt acggtgcgga aatccagcca
    12361 ttcctgcaaa atcgttttca ggtttttctg cgcggggcgg ttgtccagcc ccatcatcac
    12421 caagttcatg gacacattgc cttccagcga agtttgcgcc atcagcgtgt tgatgaaggt
    12481 atcggtatcg atgcggctgg atttcggttc gaacaccagt cgcacgggat gttcgccgtc
    12541 ggactcgtcg cgcacgcggt cgattaaatc cagcatcagc tttttggtat tgagctggtc
    12601 ttggttgagc tgctttttgc ccgctttcgg tttcgggttg gtctgctctt cgatttcggc
    12661 aaggattttg gcggaattgg cgttcggcgg tagctcggtt acgatgacgc gccattgtcc
    12721 gcgcgccaat ttttcgattt cataacgcgc acgcacgcgc acgctgccct tgccggtttc
    12781 ataaatccgg cgcaattcgt ccgccggcgt gatgatttga ccgccgccgg caaaatcagg
    12841 tgcgggaatg tattgcatca ggtcggcggt ttccagcgtc ggctttttca acagcgcaat
    12901 cgccgcctgc gtaacttcgt tcaaattgtg cgacggaatc tcggtcgcca tgcccaccgc
    12961 gatgcctgac gcgccgttga gcaacaccat aggcaggcgg gcgggcaggt gcagcggctc
    13021 gtcaaacgcg ccgtcgtagt tcggcacgaa atccaccgtt ccctgattga tttcggacaa
    13081 cagcaattcc gcaatcggcg tgagccgcgc ttcggtgtaa cgcatcgccg ccgcaccgtc
    13141 gccgtcgcgc gaaccgaagt tgccgatgcc gtcgattaag ggatagcgca aggtaaaatc
    13201 ctgcgccatc cgcaccatcg cctcataggc ggaactgtcg ccgtgcggat ggtatttacc
    13261 caaaatctca ccgaccacgc gtgccgattt caccggcttc gcccccgccg tcaaacccat
    13321 atcgcgcatc gcaaacaaaa tgcgccgctg aacgggcttt tggccgtctg aaacttcagg
    13381 cagcgcgcgg cctttgacca cgctcatggc gtattcgaga taggcgcgtt cggcgtatcg
    13441 gccgagcatc agcgtattgg aatcggtatg tggagcgtgc ggttgcatat ttatcgtatt
    13501 tccttttcgg ttgaaccccc gccacttgga catctgtcct tcggggcggt agaatcagac
    13561 tttatttggg agggggcaac cccttccaaa tcagggcaac acatagggcg gtgctttatg
    13621 tgtcgtcctg tgtgttgaaa cattgtgtat gcggaatgta aagcaaaggg cattattgta
    13681 aatcaaaacg gcaaaccata gtgggcgcgt gtctgaatct gaatcaaata cgggaaatgt
    13741 gaaaatatgt tataaataag gctttcccac tttcacacat tggagacgat atggaactgg
    13801 tatttatccg ccacggacaa agcgaatgga acgcgaaaaa cctgtttaca ggctggcgcg
    13861 acgtgaagct gagcgagcag gggcttgccg aggctgccgc cgccggtaaa aaactgaaag
    13921 aaaacggcta tgagttcgac atcgccttca catccgtcct gacccgcgcg attaagacct
    13981 gcaacatcgt tttggaagaa tccgaccaac tgttcgtacc gcaaatcaaa acatggcggc
    14041 tgaacgaacg ccactacggc caactgcaag gtttggacaa aaaacaaacc gccgaacaat
    14101 acggcgacga gcaagtccgc atctggcggc gcagctacga caccctgccg ccgcttttgg
    14161 acaaagacga tgagttttcc gcacacaaag accgccgcta tgcccatctg cctgccgatg
    14221 tcgtacccga cggcgaaaac ctgcaagtaa cgctggagcg cgtattgccg ttttgggaag
    14281 accaaatcgc ccccgcgatt ttgagcggca aacgcgtctt ggtggcggcg cacggcaact
    14341 ccctgcgcgc gctggcaaaa cacatcgagg gcatttccga caaagacatc atgggcttgg
    14401 aaatcccgac tggccagccg ttggtgtaca aattggacga caatttgaaa gtcatcgaaa
    14461 aattctacct gtaagggtgt gaaataaaaa atgccgtctg aaggcttgag cgttcagacg
    14521 gcatttttga cggtaaacgt agcaactgct ttcgcgagaa cgacgggatt ttaggttttt
    14581 gtttttctgt tttcgtggga aggatgggtt ttaggttgcg gtcatttatc ggaaaagcag
    14641 aaaccgctcc gccgtcattc ccgcgaaggc gggaatctga acacgtccgt agggaaacct
    14701 atatcccgtc attcccatga aagtgggaat ccaggatgca ggggaaatcg ttttatccga
    14761 taagtttccg ccccgaaagg tctggattcc cgcctgcgcg ggaatgacgg gatttttgta
    14821 accgcagggc gggcttcagc ctgccaatca acaaccgaaa atgaagaaaa acggtgggct
    14881 gaagcccacc ctacgcaatt gcttttgcgg agatgacggg gttttagggt gaagatggtg
    14941 ggagttggtg ggagttggtg ggagttggtg ggctgaagcc caccctacgc aactatccta
    15001 cgcaactact acgcaactac tacgcaacta ctacgcaact actacgcaac tactacgcaa
    15061 ctactacgca actactacgc aattgccgcc gccttgcggt acagctcgaa caggaaggcg
    15121 gtgcgttcgg cttcgtcgtc ggtgtttttg cctgttttgt agccgtaggc tttatcgact
    15181 gccttgtcga gggcggcgtg ggctttgtct agggcggtat agcctgcgtc gggcgcatag
    15241 agttcggcga gggtcggctc gggcaaaccg gcttcccgcg cttctcggcg gtattgtccg
    15301 cgcgcgtcga ggacggcttg ggcggcggtt tcgacggcgg agcggagcgg gtcttggcgg
    15361 tcgttttcag acggcatccg gcagctttcg gggaagggga agttgttgta cacaacggta
    15421 ttggaatagc ggtaacgact ttccagacgg ccggcaacgg tacgcataaa ggcgttgtgc
    15481 atggtggagc tgaggatgcc gaagtggtag aggctggcgt ttggaagggt aaataccaaa
    15541 tcgctgacaa ctgtttcata tgatagataa ccgatgggga cgaaacggcg gctttcggat
    15601 gagacgcgtg ggataatcag aaaattgccg tctgaaggct ggcggatttt ttgaaaaagc
    15661 cacggggttg ctgcatcttt ttgagtttgt ttgtcgctgc tggcttcgcg catggttttg
    15721 actgcctgaa tacgggcttg aacttgtggc atttgtttca ggtcgtggtt gcgtttgaca
    15781 tcggatacgc cgtgaaacca caggcaccaa cgggttttgc cgttgataaa ttcctctgcg
    15841 ccgacaaagg ggcgggtgta ttgttccgcc aagggttcgg cggcaatcag ggcgtctttt
    15901 tcggcggttg agaggataag gttgccgccg tcggtcggct tattaccata aagcatttca
    15961 atttccccgc tgatttgggt tctgcgcttg gcgataatca aatcgggcgc gtcaatcaga
    16021 tacggattga tgttggccgc ggcgtgtttt acgggttcgc ctttgatgtc gggatagtcg
    16081 tagagggttt tttcagacgg cattggcggc ttttggcgga agccgacgat gatgcagtgg
    16141 acggcggctt tgcctgcggc ttggctcgtc cattggaagg tgcggtgggc aaagtggatt
    16201 tcgatgcctt ggtttaaaag gctgccccag aggatttcga cctgctggcc ttggcagatg
    16261 gaattggtgg aaacaaatgc cgtctgaact tggggatgct gcgccatgat gccggcggct
    16321 ttgacgtacc agttgcagac gtaatccaac aggccgtagc ctttgatatg gccgcagatg
    16381 ctttcgaggt cgtttttctg ctctttggtt tggtaggtcg agccgataaa ggggggattg
    16441 ccgaagatgt agtccaccgc ctgccaaggt gtgcggaggc tgttggcgtg gatgatttcg
    16501 gcggcgtctt cgagcggcag cgtatggcag gcgacttcgc cgtcgaagcg gatttgcgtg
    16561 cggatgttgc attggtggtt tttgagccac atggcggtgc gggcgatgag gacggcaaat
    16621 tcgtctattt cgatgccgtg aaactgtttc agacggcatt ggacggacgg gctgtcgaac
    16681 aggccgcctg ctttgtcttt gagggcttcg gcgatgatgt cgtcttcaag ggcgcggatg
    16741 cggtcgtagg cgacgataag gaagttgccg cagccgcagg ccgggtcgag gaattgcagg
    16801 ttttggattt tttggtagaa ggcggcgagc tttttggctt tgtcgcgttt gaaggctttg
    16861 acggcttcaa attcggcgcg caggttttct aaaaaaaggc cgttgatgac tttgtcgatg
    16921 ttggcggttt cggtgtagtg tgcgcccgct tcgcgccgct cttgtgcgtc catgactgat
    16981 tggaagagcg tgccgaagat ttcgggactg at
//
LOCUS       DAWKJW010000023        16781 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.023, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000023 DAWKJW010000000
VERSION     DAWKJW010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16781)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16781)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16781
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.023"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..590)
                     /locus_tag="WJJ54_000605"
     CDS             complement(<1..590)
                     /locus_tag="WJJ54_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEZ7341498.1"
                     /translation="MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAA
                     KAYDQIDNAPEEKARGITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVCSAADGPMPQTREHILLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSS
                     YDFPGDDCPIVQGSALKALEGDAAYEEKIFELAAAL"
     gene            complement(678..2783)
                     /gene="fusA"
                     /locus_tag="WJJ54_000606"
     CDS             complement(678..2783)
                     /gene="fusA"
                     /locus_tag="WJJ54_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEZ7341499.1"
                     /translation="MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVH
                     DGAATTDYMEQEQERGITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKT
                     RLRANPVPIVIPVGAEDNFSGVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEW
                     RQNMIEAAAEASEELMDKYLGGDELTEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQ
                     RMLDAVVELLPAPTDIPPVQGVNPNTEEADSRQASDEEKFSALAFKMLNDKYVGQLTF
                     IRVYSGVVKSGDTVLNSVKGTRERIGRLVQMTAADRTEIEEVRAGDIAAAIGLKDVTT
                     GETLCAESAPIILERMEFPEPVIHIAVEPKTKADQEKMGIALNRLAKEDPSFRVRTDE
                     ESGQTIISGMGELHLEIIVDRMKREFGVEANIGAPQVAYRETIRKAVKAEYKHAKQSG
                     GKGQYGHVVIEMEPMEPGGEGYEFIDEIKGGVIPREFIPSVDKGIRDTLPNGIVAGYP
                     VVDVRIRLVFGSYHDVDSSQLAFELAASQAFKEGMRQASPALLEPIMAVEVETPEEYM
                     GDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEMFGYSTDLRSATQGRATYSMEFK
                     KYSEAPAHIAAAVTEARKG"
     gene            complement(2802..3272)
                     /gene="rpsG"
                     /locus_tag="WJJ54_000607"
     CDS             complement(2802..3272)
                     /gene="rpsG"
                     /locus_tag="WJJ54_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEZ7341500.1"
                     /translation="MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVY
                     GALEQIEKKTGKVAIEVFNEAIANAKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMR
                     WVRDAARKRGEKSMDLRLAGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF"
     gene            complement(3390..3761)
                     /gene="rpsL"
                     /locus_tag="WJJ54_000608"
     CDS             complement(3390..3761)
                     /gene="rpsL"
                     /locus_tag="WJJ54_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEZ7341501.1"
                     /translation="MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DTAGVKDRKQARSKYGAKRPK"
     gene            complement(3940..4089)
                     /locus_tag="WJJ54_000609"
     CDS             complement(3940..4089)
                     /locus_tag="WJJ54_000609"
                     /inference="COORDINATES: protein motif:HMM:NF016462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ7341502.1"
                     /translation="MSAALWHKKLSWKGFTPQINFRYNKINSNMPAFYSRSGKERFVS
                     IEKTY"
     gene            complement(4086..4343)
                     /locus_tag="WJJ54_000610"
     CDS             complement(4086..4343)
                     /locus_tag="WJJ54_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341503.1"
                     /translation="MKPRNLFFAGCLLTSATFAEDIGVPVELINVGNRIAMPSEGESL
                     ALLPFAEDVPPVRDAMPSEVPKSAAGGDVRGNRMGMPINIG"
     gene            complement(4635..8810)
                     /gene="rpoC"
                     /locus_tag="WJJ54_000611"
     CDS             complement(4635..8810)
                     /gene="rpoC"
                     /locus_tag="WJJ54_000611"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEZ7341504.1"
                     /translation="MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPE
                     TINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRE
                     RMGHIELAAPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQ
                     LLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKK
                     IAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLLELHAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIK
                     GKGGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGL
                     ASTVKAAKKLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDI
                     VLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKITVRLREWVKNEAGEFE
                     PVVNRYETTVGRALLSEILPKGLPFEYVNKALKKKEISKLINASFRLCGLRDTVIFAD
                     HLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANAEVKEIEDQYRQGLVTNGERYN
                     KVVDIWGRAGDKIAKAMMDNLSKQKVIDRAGNEVDQESFNSIYMMADSGARGSAAQIK
                     QLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYL
                     TRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRILGRVTASDVVDPSSG
                     ETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCYGRDLARGKLVNAG
                     EAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTARFSSQMRYVANN
                     KGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLATWDPHTRPM
                     ITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPTVKLLDEN
                     GVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVA
                     ELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQILVHDG
                     QVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQ
                     MLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
                     SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQG
                     VEQETAETQVTDE"
     gene            complement(8967..13145)
                     /gene="rpoB"
                     /locus_tag="WJJ54_000612"
     CDS             complement(8967..13145)
                     /gene="rpoB"
                     /locus_tag="WJJ54_000612"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEZ7341505.1"
                     /translation="MSYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENA
                     FDKRTDDGLQAAFNSIFPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRA
                     RIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVF
                     FEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALG
                     YNNEQILDIFYDKETFYLSSNGVQTDLVADRLKGETAKVDILDKEGNVLVAKGKRITA
                     KNIRDITNAGLTRLDVEPESLLGKALAADLIDSETGEVLASANDEITEELLAKFDING
                     VKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNR
                     LFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAADKGGYVLSVE
                     DIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQ
                     AESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLT
                     RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIDG
                     KVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGDLVTCREKGETIMATPDRVQYMDV
                     ATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSA
                     TAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
                     KAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYT
                     SIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKV
                     TPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRA
                     QSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLA
                     GLPSRHDWFDIRLADEDLAKQLELIKLSLQQKREEADELYEIKKKKLTQGDELQPGVQ
                     KMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGIGERIDRMLKEQRKASELREFLNKLYNGSGKKEDLDALTD
                     EEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQITL
                     YDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
                     GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
                     EIRSLGLDIDLERY"
     gene            complement(13336..13707)
                     /gene="rplL"
                     /locus_tag="WJJ54_000613"
     CDS             complement(13336..13707)
                     /gene="rplL"
                     /locus_tag="WJJ54_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEZ7341506.1"
                     /translation="MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPA
                     GAGAADAEEKTEFDVVLASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVS
                     KAEAEDIQKQLEEAGAKVEIK"
     gene            complement(13765..14265)
                     /gene="rplJ"
                     /locus_tag="WJJ54_000614"
     CDS             complement(13765..14265)
                     /gene="rplJ"
                     /locus_tag="WJJ54_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEZ7341507.1"
                     /translation="MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRAN
                     ARKEGVYLRVLKNTLARRAVQGTSFAELADQMVGPLVYAASEDAVAAAKVLHQFAKKD
                     DKIVVKAGSYNGEVMNAAQVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKK
                     AGEEAA"
     gene            complement(14495..15190)
                     /gene="rplA"
                     /locus_tag="WJJ54_000615"
     CDS             complement(14495..15190)
                     /gene="rplA"
                     /locus_tag="WJJ54_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEZ7341508.1"
                     /translation="MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDV
                     SFNLGVDPRKSDQVIRGSVVLPKGTGKITRVAVFTQGANAEAAKEAGADIVGFEDLAA
                     EIKAGNLNFDVVIASPDAMRIVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTM
                     GLGIRVDTSSVNN"
     gene            complement(15190..15624)
                     /gene="rplK"
                     /locus_tag="WJJ54_000616"
     CDS             complement(15190..15624)
                     /gene="rplK"
                     /locus_tag="WJJ54_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEZ7341509.1"
                     /translation="MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQGMEPGLPIPVVITAFADKSFTFLMKTPPASILLKKAAGLQKGSSNPLTNKVGKLT
                     RAQLEEIAKTKDPDLTAADLDAAVRTIAGSARSMGLDVEGVV"
     gene            complement(15725..16261)
                     /gene="nusG"
                     /locus_tag="WJJ54_000617"
     CDS             complement(15725..16261)
                     /gene="nusG"
                     /locus_tag="WJJ54_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEZ7341510.1"
                     /translation="MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEK
                     VVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPISQR
                     EAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQI
                     FGRETPVELEFSQVEKIN"
     gene            complement(16263..16541)
                     /gene="secE"
                     /locus_tag="WJJ54_000618"
     CDS             complement(16263..16541)
                     /gene="secE"
                     /locus_tag="WJJ54_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEZ7341511.1"
                     /translation="MTEHTPEKKNVKVDQLVVQDKESASNSGKEGFFAYFSNSWSEFK
                     KVVWPKREDAVRMTVFVIVFVAVLSIFIYAADTAISWLFFDVLLRREG"
     gene            complement(16658..16733)
                     /locus_tag="WJJ54_000619"
     tRNA            complement(16658..16733)
                     /locus_tag="WJJ54_000619"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(16698..16700),aa:Trp,seq:cca)
BASE COUNT         4203 a         4329 c         3782 g         4467 t
ORIGIN      
        1 tccaatgcgg cagccagttc gaagattttc tcttcataag cggcatcgcc ttccaaggct
       61 ttcagtgcag aaccttgtac aatcgggcag tcgtcgccgg ggaagtcgta gctggacagc
      121 aggtcgcgga tttccatttc aaccagttcc aacagctcgg catcgtcgac catgtcgcat
      181 ttgttcatga acacgatgat gtaaggtacg cctacttgac gggccagcag gatgtgttcg
      241 cgggtttgcg gcatagggcc gtcggctgcg gaacatacca ggattgcacc gtccatttgt
      301 gcggcgccgg taatcatgtt tttaacgtag tcggcgtgcc ccgggcagtc tacgtgtgcg
      361 tagtggcggg tttcggtttc gtattccacg tgcgaggtgt taatggtaat accgcgtgct
      421 ttttcttcgg gtgcgttgtc gatttggtcg taagcttttg cagcaccacc gaatttttta
      481 gccaaaatag tagtcaaagc ggcagtcagg gtggttttac catggtcaac gtgaccgatg
      541 gtgccaacgt ttacgtgcgg tttgctacgt tcgaattttt ccttagccat gagctaattc
      601 ctttacatta aagatcgatt aaagaacaat gccgtctgaa aaatcatttc agcctttcgg
      661 acggcctatt tgcctgatta gcctttacgg gcttcagtta cagcagcagc tatgtgggca
      721 ggagcttcag aatatttctt gaactccata gagtaagtag cgcggccttg ggttgcagaa
      781 cgcaggtcgg tcgaataacc gaacatttct gccagaggta cttcggcacg gactttttta
      841 ccgccgatac cgtcatcatc catacccaat acaacaccgc gacggcggtt caagtcgccc
      901 attacgtcgc ccatgtattc ttccggggtt tccacttcaa ctgccataat cggctcaagc
      961 agggcgggag atgcttgacg cataccttct ttaaacgctt gagaagcagc caattcaaat
     1021 gccaattggg aagagtcgac atcatggtaa gaaccgaata ccagacggat acgtacgtca
     1081 actacaggat agccggcaac gataccgtta ggcaacgtat cgcggatacc tttatcgaca
     1141 gacggaatga attcgcgagg aatcacacca cctttaattt catcgataaa ctcgtaacct
     1201 tcaccacccg gctccatagg ttccatttca atcacaacgt gaccgtattg acctttacca
     1261 ccggattgtt ttgcatgttt gtattcagct ttaacggctt tgcggatagt ttcacggtaa
     1321 gccacttgag gtgcaccgat atttgcttcc acaccgaatt cgcgtttcat acggtcaaca
     1381 ataatttcca agtgcagctc acccataccg gaaataatgg tttgaccgga ttcttcgtct
     1441 gtacggacac ggaaagaagg gtcttcttta gccaagcggt tcagggcgat acccattttc
     1501 tcttggtcgg ctttggtttt cggctcaacg gcaatatgga ttaccggctc ggggaattcc
     1561 atacgttcca agataatcgg cgcgctttcc gcacacaggg tttcaccggt agtaacgtct
     1621 ttcagaccaa tagcggctgc gatgtcgccg gcgcgtactt cttcgatttc agtacggtct
     1681 gcggcagtca tttgtaccaa acgaccgata cgttcgcgag tgccttttac ggagttcaat
     1741 acggtatcgc cggattttac tacgcctgag taaacgcgga taaaggtcag ctgaccgacg
     1801 tatttgtcgt tcaacatttt gaacgccaat gcagagaatt tctcttcatc gctggcttga
     1861 cggctgtcgg cttcctcggt attcgggttg acaccttgaa ccggaggaat atcggtagga
     1921 gctggcagca attctacaac tgcgtccaac atacgttgaa cacctttgtt tttaaatgca
     1981 gaaccacaca gcataggctg aatttcgcct gccaaagtac gttgacgcaa cgcgcctacg
     2041 atttcttctt cggtcagctc gtcgccgcct aagtatttgt ccatcagttc ttcgctggct
     2101 tcggctgcgg cttcaatcat attttgacgc cattcttcgg cagtttcgac caattcggca
     2161 ggaatatcgc cataggtaaa ggttgtacct ttatcggctt cattccaaat gatggatttc
     2221 attttcaaca aatcaaccac accgctgaag ttgtcttccg caccaaccgg aatgacgata
     2281 ggtacagggt ttgcgcgcaa acgggttttc atttgctcga caacgcggaa gaagttggca
     2341 ccctgacggt ccattttatt gacaaacgcc aagcgcggca cttggtattt gttggcttgc
     2401 cgccatacgg tttcagattg gggttgaaca ccgcccaccg cgcagtaaac cattaccgcg
     2461 ccgtccaata cacgcataga acgctctacc tctacggtaa agtcaacgtg tcccggggtg
     2521 tcgatgatgt tgaagcggtg ctcggggaat tgtttcgcca taccggacca gtaggaagta
     2581 acggcagcag aggtaatggt aataccacgc tcttgctctt gttccatgta gtcggtagta
     2641 gccgcaccgt catgcacttc gcccagcttg tgggtcaaac cggtatagaa caaaatacgt
     2701 tctgtcgtcg tggttttacc cgcatcgata tgggcggaaa taccgatgtt acggtacagg
     2761 ctgatcgggg tcttacgagc cattttatta gcctttcaaa attagaaacg gaagtgagag
     2821 aatgctttgt tggcttcagc catacggtgt acttcttcac gttttttcaa cgcaccgcca
     2881 cggccttcgg acgcatcaat caattcgcct gccaaacgca ggtccatgga tttctcacca
     2941 cgtttgcggg ccgcatcgcg aacccagcgc attgccaaag ccaaacggcg tgaaggacga
     3001 acttcaacag gaacttggta gtttgcacca cctacacggc ggcttttcac ttccacgata
     3061 ggtttggcgt ttgcaatggc ttcgttaaat acttcgattg ctactttgcc ggtttttttc
     3121 tcaatctgtt ccaacgcacc gtaaacgata cgctcggcaa cggatttttt accgtcaatc
     3181 atcaatacgt tcatgaattt ggtcaactcg acgctgccga atttaggatc tggcagtacg
     3241 tcgcgcttgg ggacttctct acgtcttggc attttaattt cctttaatct attcagtcgg
     3301 gtctattccc atgaataccc aattgagtat tcacttactc ggccgttgtt ctgcttaggc
     3361 ggccgacgtg cctatttaag tcccagtaat tatttaggac gcttagcacc atatttggaa
     3421 cgggcttgtt tacggtcttt aacacctgca gtatccaaag aaccgcgtac agtgtggtaa
     3481 cgcacacctg gcaagtcttt tacacgaccg ccgcgaatca atacgacact gtgctcttgc
     3541 aggttgtggc cttcgccgcc gatgtatgaa atgacttcaa aaccgttggt caggcggact
     3601 ttacatactt tacgcaatgc agagttaggt tttttagggg tagtcgtgta tacacgggtg
     3661 cacacgccgc gtttttgcgg gcaggcttcc agtgcgggca ctttgtttac gtacacgggc
     3721 ttttgacggc ctttgcgtac caattggttg atagttggca tattttctcg tcctgttgag
     3781 ttaaatactt gccgacacca tgtcggcaag agtggaatta tatttttatt gcaagtatac
     3841 agtcaagcat aacgacaaga agaaagatga ttttcttgtt tgccgataaa tatttaccga
     3901 cacccctcac aatcagtcgg acgactgaag aaaatactgt caatacgttt tttctatact
     3961 gacaaaccgt tccttgccgc tgcgcgaata aaaggcgggc atattgctgt tgatcttgtt
     4021 gtaacggaaa tttatttggg gtgtaaatcc tttccacgac agttttttat gccataaagc
     4081 cgcgctcatc cgatgttaat cggcattccc atccggttac cccgaacatc gccgcctgcc
     4141 gcgcttttag gaacttcaga cggcattgca tcgcgaaccg gcggtacatc ctcggcaaac
     4201 ggcaggaggg cgaggctttc cccttcagac ggcatcgcaa tccgattacc gacgttaatc
     4261 agttcgacag gtacgccgat atcctcggca aacgtcgccg aagtcagcag gcagcctgca
     4321 aaaaagagat ttctgggttt catatttatt ttttaaagga aatgccgtct gaagtttcag
     4381 acgacatttg tttaaatgga aaacattaag acgctacttt ttttgaccgc cgaaaccaac
     4441 atccctggca aagttatttt ggtctccgga cgtaccgacg acacccgcca cctcgttggt
     4501 ctccggcccg aaaataccta aggaataatc cacacgcctc aaaatgacga aaacgcttgt
     4561 ttttgcctta atcggacaaa gaaaaaccgc aagcttaaag cttgcggttt tgtattgaat
     4621 aaacgcgccg aagattattc atccgttact tgggtctcag cagtctcctg ctctacccct
     4681 tgccattgct gatgacggct gcggtgataa gtcaaaccgg taccggcagg aatcaggcgg
     4741 ccgacgatga cgttctcttt taaaccgcgc agttcgtctt gtttgcccat aatcgcggct
     4801 tcggtcagaa cacgggtcgt ttcttggaac gatgcagcag aaatgaagct gtcggtagac
     4861 agggaggctt tggtaatacc cagcaatacg ttttcgtaac gtgccggttc tttgccttct
     4921 tccaaagctt tttcattggc agccatcaca tcgccgcgtt cgacctgctc gccggtaatg
     4981 aagccggttt cgccggcatc cgcaatgttc acacggcgca acatttgacg gatgatgact
     5041 tcgatgtgtt tgtcggaaat cttcacacct tgcagacggt aaacctcttg cacctcttgg
     5101 acaatgtagc gtgccagtgc ttcgatacct tgcagacgca gaatatcgtg cggatcgacc
     5161 gcgccgtcca caatggtttc gccgcggttt accacttgac cgtcgtgtac caaaatctgt
     5221 ttctctttgg aaatcaaagt ctcgtatgct acgccgtcca cgtcggtaat aatcagacgt
     5281 tgcttgcctt tggtctcttt gccgaaggaa acggtaccgg taatttccgc caacataccg
     5341 gcatctttcg gcacgcgtgc ttcaaacaat tcggcaacgc gcggcagacc accggtaatg
     5401 tcgcgggttt tggaagaggc ttgcgggata cgcgccaata cgtcgccttt accgatttcc
     5461 tgaccttcgc gtacggtaat caccgcacca acggggaatg ccatggatac cggagtagaa
     5521 gtaccgggaa tacagatttc cacgccgttt tcgtccaaga gtttcacagt cggacgcagc
     5581 agtttggaag cactagagga acgacgttta ccgtcgatca ctaccaaagt ggacaaaccg
     5641 gttacatcat cggtttgttt ggcaacggta acgccctctt ccacgttttc gaatttcacc
     5701 atacctgcgt gttcggtaat catcggacgg gtatgcggat cccaggttgc caaggtttga
     5761 ccggctttaa tggccatacc gtcttgtacc agcaggatgg caccgtaagg tactttgtgg
     5821 cgttcgcgtt cacggccgat gtcatcgtga atcacgactt cacaagaacg gccgatgaca
     5881 accaactcgc ctttattgtt ggcaacataa cgcatttggc tgctgaatcg tgccgtaccg
     5941 ttggatttgg cttccacttg gctggctgct gccgcacggg atgccgcacc accgatgtgg
     6001 aacgtacgca tagtcagctg ggtacccggt tcgccgattg attgggcggc aatcacgccg
     6061 actgcctctc cggcattgac cagtttgccg cgcgccaagt cgcggccgta acagtgcgcg
     6121 cacaaaccgt ggcgggtttt acaagtaatc ggcgtacgga ctttgacttc atcgacaccg
     6181 gattggtcaa tcatatccac cagtttttca gtcaacaacg tgcctgcttc aaccaaggtc
     6241 tcgccgcttg acggatcgac aacgtcagac gcagtaacac ggcccaaaat acgatcgcgc
     6301 aatgcttcaa tcacatcacc gccttgtacc actgccttca tgacaaagcc gtctgaagta
     6361 ccgcaatcgt cttcaacaac gaccaaatct tgagttacgt ctaccagacg acgggtcagg
     6421 taaccggagt tcgcggtttt caatgcggta tccgccaaac ccttacgcgc accgtgggtc
     6481 gcaataaagt attgcaatac ggtcaggcct tcgcggaagt ttgaggtaat cggcgtttca
     6541 ataatcgagc cgtcaggttt agccatcaac ccgcgcatac cggacaactg tttaatctga
     6601 gccgcagaac cacgggcacc ggagtccgcc atcatataaa tggagttgaa tgactcttga
     6661 tcgacttcgt tgccggcacg gtcgataact ttttgtttgg acaagttatc catcatcgct
     6721 ttagcgattt tatcgccggc acgaccccaa atatccacta ctttgttgta acgttcgcca
     6781 ttggtaacca aaccttgacg gtattggtct tcgatttctt taacctcggc attggcttca
     6841 gccagcaagg ccgctttttc tttcgggatt tccatatcgt caacggcaat ggaaataccg
     6901 ccttttgccg caaatccgaa accggtgtac atcaggtggt cagcaaagat aaccgtatcg
     6961 cgcaagccgc acaggcggaa cgatgcgtta atcagtttag aaatttcttt tttcttcaat
     7021 gccttgttga catattcaaa cggcaggcct ttcggcagga tttcgctcaa caatgcacgg
     7081 ccgacggttg tttcgtaacg gttaacgaca ggttcaaact cacctgcttc gtttttcacc
     7141 cattcgcgca gacgtacggt aattttcgta cccagctcga cctgtttggt atggtatgca
     7201 cgatgcactt ctttcacatc ggcaaacagg ctgccttcgc ctttggcatt gatacggtcg
     7261 cgggtcatgt agtacaaacc caatacgatg tcttgggaag gtacgataat cggttcgccg
     7321 ttggctggag acaatacgtt gtttgaagcc agcatcaggg tgcgcgcttc catttgtgct
     7381 tccaagctca atggaacgtg tacagccatt tggtcaccgt caaagtcggc gttaaatgcg
     7441 gcacacacca atgggtgtaa ctgaatcgct ttaccttcaa tcaggatagg ttcgaacgct
     7501 tgaataccca aacggtgcag ggttggcgca cggttcagca taatcggatg ttcgcggatc
     7561 acttcttcca agatatccca tacttcaggt acttcttgtt ctaccagttt tttcgcagct
     7621 ttaacggtag aagccaaacc ttgtttttcc aatttgtgga aaatgaatgg tttgaacaac
     7681 tccaaagcca tttttttcgg cagaccgcat tggtgcagac gcaggtatgg gcctacggta
     7741 atcacggaac ggccggagta gtccacacgt ttacccagca ggttttgacg gaagcgtccg
     7801 cctttacctt taatcatgtc agccaatgat ttcagcgggc gtttgttggc gccggtcatg
     7861 gctttaccgc gacggccgtt atccaacagc gagtcaactg cttcttgcaa catacgtttt
     7921 tcgttgcgga cgataatgtc gggcgcgtgc agttccagca ggcgtttcag acggttgtta
     7981 cggttgatga cgcgacggta caaatcgttc aaatcggaag tggcaaaacg accgccatcc
     8041 aatggaacca acggacgcaa atcaggcggc aataccggca gcacgtccat aatcatccat
     8101 tccagcttca taccggaacg gtggaaggct tccaatactt tcaaacgttt ggcgattttt
     8161 ttgattttgg tgtcggatcc ggtcgattcc aactcttggc gcaggatttc gatttcgccc
     8221 gctacattca gggtacgcag caattcgcgg ataccttccg cacccatttt ggcatcgaaa
     8281 tcgtcgccgt attcgtccag cttgttgtag taatcgtctt cagtcagcaa ttggcggcgt
     8341 tgcagcggag tcataccggg atcggttacc acaaatgctt caaagtacaa tacgcgctcg
     8401 atatcgcgca aagtcatgtc cagtaccata cccaagcggg aaggcaggga ttttaagaac
     8461 caaatatgtg cgacgggcgc agccaattcg atatggccca tgcgttcgcg gcgcactttg
     8521 gacagggtta cttccacgcc gcatttttca cacgttacgc ctttaaattt caagcgtttg
     8581 tattttccgc acaagcattc gtagtctttg accgggccaa agattttggc acagaacaaa
     8641 ccgtcacgct caggtttgaa cgtacggtag ttgatggttt caggtttttt gacttcgcca
     8701 taagaccatg agcggatggt ttcgggagag gcaataccga ttttaatggc atcaaactct
     8761 tcttccatgc cggcagtttg caacggatta aataagttca acaaattcat ttttgctcct
     8821 tgaaggaagt atttttaccg catggcggat tttcgatatg gggaaacggt acttttgatt
     8881 tcagacggcc taaatgccga ttgcttcatt cttattctga aaccactttt tcagacgacc
     8941 ctgaaaggcc gtctgaaaac ttttgtttag taacgttcca aatcgatatc caagcccagt
     9001 gagcgaatct ctttgaccaa tacgttgaag gactcgggca taccggcatc gattttgtgt
     9061 tcgcctttga cgatgttttc gtacattttg gtacggccgt tcacgtcgtc agacttcaca
     9121 gtcagcatct cttgcagcgt gtatgccgcg ccgtatgctt ccaatgccca aacctccatc
     9181 tcgccgaaac gttggccgcc gaactgggct ttaccgccca aaggctgctg ggtaaccaga
     9241 ctgtacggac cggtagaacg cgcgtgcatt ttttcgtcaa ccaagtggtg cagtttcaga
     9301 tagtgcatca cacctactgt aaccttgcgg tcaaatgctt cgcctgaacg gccgtcatac
     9361 agcgtgattt gggttttact gtcgttgaag cccagttttt caacctcagg atcgtcgctc
     9421 ggataagcca agttcaacat ttcgcggatt tcagactctt tcgcaccgtc gaatacagga
     9481 gaggcgaaag atgcaccttt acgcaggttg gaggccagtt cgatgatttc ttcatcagtc
     9541 agggcatcca aatcttcttt cttgccgcta ccgttgtaga gcttgttcaa gaattcacgc
     9601 agctcgctgg ctttgcgttg ctctttcagc atacggtcga tacgctcgcc gatacctttt
     9661 gctgcccaac ccaagtgaac ttccaaaatc tgaccgatgt tcatacggga aggtacgccc
     9721 aatgggttca gtacgatgtc taccggacgg ccgtccgcca tgtaaggcat gtcttccact
     9781 ggcagaatgc gcgataccac gcctttgtta ccgtggcggc ccgccatttt gtcgccggct
     9841 tgcagacggc gtttgatggc gataaaaact ttcaccattt tttgtacgcc gggttgcaat
     9901 tcgtcgcctt gggtcagttt tttcttcttg atttcgtata actcgtccgc ttcttcgcgt
     9961 ttttgttgca ggctcaattt aatcagttcc aactgtttgg ccaaatcttc atcagccaga
    10021 cggatatcga accaatcgtg cctgctcggc agacccgcca gatattcggt cgtgatttcg
    10081 ctgcctttgg ccagcttcat cggaccgccg ttggctttct gaccgacaat catacgctcg
    10141 atacggtcga atgcgtcgtt gtcgaaaata cgcaattggt cgttcaaatc caaacggtag
    10201 cgtttcaact cggaatcgat aatggattgg gcgcgtttgt cgcgttggat gccttcgcgg
    10261 gtaaaaactt gaacgtcgat aaccgtaccg ctcataccgg taggcatacg caatgaagta
    10321 tcttttacgt cagatgcttt ttcaccgaag atggcgcgca gcagtttttc ttccggcgtc
    10381 agctgggttt cgcctttagg cgttactttg cctaccaaca catcgccggc ttctacttcc
    10441 gcaccgatat aaacgatacc ggattcgtcc aaacggtttt gcatacgctc ggacaagttc
    10501 ggaatatcgc gggtaatgtc ttccgcaccc agcttggtat cgcgggcaac gacattcaat
    10561 tcctcaatgt gaatcgaagt atagcggtcg tccgcagcca ctttttcgga aatcagaatc
    10621 gagtcttcgt agttgtaacc gttccacggc atgaaggcga tggtcatatt ttgacccaaa
    10681 gccaattcgc ccaaatcggt ggacgcgccg tcggccacca aatcgccgcg ctgcaaaaca
    10741 tcgccggctt tgacggcagg acgctgattg atattggtag actggttgga acgggtaaat
    10801 ttaaccaagt tgtaaatatc gacacccact tcgccggcag tcgcttcgtc gtcatggaca
    10861 cgaatcacaa cacggttggc atcgacatac tcgaccacgc cgcctcggcg ggcaacgatt
    10921 gcagtagcag agtcaacggc aacggaacgc tcgataccgg taccgaccat cggtttttca
    10981 ggacgcaagc aaggcactgc ctgacgttgc atgttggcac ccatcaatgc gcggttcgcg
    11041 tcatcatgtt ccaagaacgg aatcagggat gctgcaacgg ataccacttg accagttgcc
    11101 acgtccatat attggacgcg gtcgggcgtt gccataatgg tttcgccttt ttcacgacag
    11161 gtaaccaaat cgccaatcag attgccatct gaatccaaat cggcattcgc ctgtgcaatc
    11221 acatagcggc cttcttcgat ggcagacaag taatcgattt cctcggttac tttgccgtcg
    11281 ataacgcggc ggtaaggcgt ttccaagaaa ccgtaatcat tggtgcgcgc ataaacggac
    11341 aatgagttga tcaaaccgat gttcggacct tcaggcgttt caatcggaca tacgcgaccg
    11401 tagtgggtcg gatgcacgtc ccgcacctca aatcctgcac gttcgcgggt caaaccgccc
    11461 ggacccaatg cggatacgcg gcgtttatgg gttacttcag acaagggatt ggtctgatcc
    11521 ataaactgac tcaattggct ggagccgaag aattctttaa tagcggcaga aacaggtttt
    11581 gcattaatca aatcgtgcgg catcaagttt tctgattccg cctgattcaa acgttctttt
    11641 acggcacgtt ccacacgggc caaaccgcta cggaattggt tttcagtcag ctcgcctacc
    11701 gaacgtactc ggcggttgcc caagtgatcg atatcgtcca cttcgccatg gccgttacgc
    11761 aactcgacca aagtcgcaat cgaggcgaca atatcttcga cgctcaggac ataaccgcct
    11821 ttgtcggcag caccggcaaa cgtttcgttc agcaggcggc cgtaccaaga gttttgttgg
    11881 gcttcggaca gtttttgttc gtatgtgcgc gtattaaatt tcatacggcc tacgcgggac
    11941 agatcgtagc tgtcttcact gaagaacaag cggttaaaca attgctcgac cgcctcttcg
    12001 gtgggcggtt cgcccggacg catcatacgg taaatcgcaa cacgagccgc ctgccggccg
    12061 gcagtctcat ccgtacgcaa ggtattggag atataagcac cctgatccag ctcattgata
    12121 taaagggtcg taatttcttt tacgccgttg atatcaaatt tggccaacaa ctcttctgta
    12181 atttcatcat tggcagaagc caatacctcg ccggtttccg aatcaatcag atcggcagcc
    12241 aatgctttgc ccagcaggct ttccggttct acatccaaac gggtcaggcc tgcattggta
    12301 atatcacgga tatttttcgc agtaatgcgc ttacctttgg caaccaatac attgccttct
    12361 ttatccaaga tatcgacctt ggcagtttcg cctttcagac ggtctgcgac caaatcggtt
    12421 tgaacaccgt ttgaagacaa atagaacgtt tctttgtcgt agaaaatatc caagatttgc
    12481 tcattgttgt agcctaaagc cttcaacaaa atcgttaccg gcattttacg gcggcggtcg
    12541 atacggaaat acagcaaatc tttcggatca aattcaaaat ccaaccatga accacggtag
    12601 ggaatgatgc gggcggagaa taacaatttg ccggaagagt gcgtcttacc tttgtcatgc
    12661 tcgaagaata cgccgggcga acggtgcaac tgggagacaa tcacacgctc tgtgccgtta
    12721 atcacaaaag aaccgctcgg ggtcatcaac ggaatttcgc ccatatacac ttcgttttca
    12781 cgaacttctt ttaccgtcgg tttagatgct tccttatcca aaatcaccaa acggatacgc
    12841 gcgcgcaagg gggctgcata agtgattccg cgcaactgac attcgggaat atcgaacaaa
    12901 ggctcgccca atgtgtaatg cacaaactcc aatcgcgcat aaccgttatg gctcacaatc
    12961 gggaaaatag aattaaatgc cgcctgcaga ccgtcatcgg tacgtttgtc aaaagcattt
    13021 tccagctgca aaaacttcgc ataagaatca atttgggttg ccagcaagaa aggaacttcc
    13081 aaaacatttt cccgctttgc aaaactctta cggatacgtt ttttctcggt aaacgaatag
    13141 ctcatataca ctccgaaaag taattttcaa taataggccg tctgaaagca acggcacgca
    13201 tcaatctgat gtttacattt atttgcaatg atttgataaa aactatgcaa ataaatgtaa
    13261 acaatactta atgcttattt taagaagcaa aataaggctg gcagaaaact gccagccttc
    13321 ataagaagca tcaaattatt tgatttcgac tttagcgccg gcttcttcca gttgtttttg
    13381 gatgtcttcg gcttcagctt tagaaacacc ctctttaatg gttttaggtg caccgtcaac
    13441 gatgtcttta gcttctttca gacccaaacc ggtaattgca cggacaactt taatcacgcc
    13501 gactttttga tcaccggcag aagccaaaac gacatcaaat tcggtttttt cttcagcatc
    13561 ggcagcaccg gcaccagcag gacctgcaac tgcaacagca gcagcagaaa caccgaattt
    13621 ttcttcaaaa gctttaacca agtcgttcaa ttccattacg gtcaaagaac caactgcttc
    13681 caaaatgtct tctttagtaa tagccatgct attttactcc aaatattgta ttaaaaaata
    13741 attgattaac agaaacaaaa tcgattaagc ggcttcttcg ccggcttttt tctctgccaa
    13801 agcagccaaa ccgcgcgcaa agcccgatac aggagcttgc ataacgaaca acagtttgga
    13861 caacagctct tcgcggctcg gaatagaagc caactcagca acctgagcag cattcattac
    13921 ttcgccattg taagaaccgg ctttaacgac aattttgtca tcttttttcg cgaattggtg
    13981 caacacttta gcagcagcaa cagcatcttc agaagcagcg taaaccaacg gaccaaccat
    14041 ttgatcggcc aattctgcaa atgaagtacc ttgcactgca cgacgagcca aagtattttt
    14101 cagaacgcgc aaataaacgc cttctttacg tgcattcgca cgaagctcag tcatactgga
    14161 aacactgata ccgcgatatt cagcgactac gagggtttga gcattagcaa ttgccgcgct
    14221 aatttcctcg accgccactt tcttggtttc aatattgaga ctcaaggtct acctcccact
    14281 gtttataaac aggataccaa aacgatatcc caccagcgcg gtaacctaaa aagacatctt
    14341 acaagcaatc ttgcaatgtg tttcaggact accgtctgcg tagggcagtt acgattaaat
    14401 cttacgatcc ctacggtctt ggacatctac ttaattttaa gtagcccaaa ttcaagcagc
    14461 ccagaaaacc aaactgcttg aaaattcctt aagattagtt atttacgctt gatgtatcaa
    14521 cgcgaatacc caaacccatg gtgctagaca cagcaacttt tttcagatac tgacctttag
    14581 cggcagcagg cttggcttta acgatagcat ccagcaacgc atcaaagttc tctttcaaat
    14641 cagcttcagc gaatgaagca cgaccaatcg ttgcatgaac aatacctgcc ttgtcggtac
    14701 ggtactgcac ttgacctgct tttgcatttt ttactgcttc ggcaacatta ggggtaaccg
    14761 tacctacttt agggtttggc atcagaccac gaggacccaa gatggtaccc aattgaccaa
    14821 caatacgcat tgcatcggga gaagcaataa caacgtcaaa gttcagattg cctgctttga
    14881 tttcagcagc caaatcttcg aaaccgacga tatctgcacc agcttcttta gcagcttctg
    14941 catttgcacc ttgagtaaat acagccacac gggttatctt accggtgcct ttaggcagaa
    15001 cgaccgaacc acggataact tggtcagatt tacgcggatc aacgcccaag ttgaaagata
    15061 cgtcaacaga ctcgtcaaat ttagcagtcg ctgctttttt taccaaagca attgcttcat
    15121 caattgcata taatttattg gcttccacag aagagcgaag agctttcaag cgtttagata
    15181 ctttagccat tatacaacac cctccacatc caagcccatt gagcgagcag aacctgctat
    15241 agtacggaca gccgcatcca agtcagcagc agtcaaatca ggatctttag ttttagcaat
    15301 ttcttccaac tgggcacggg tcaatttacc cactttgttg gtcagaggat tagaactacc
    15361 tttttgcaaa ccggcagcct ttttcaacaa gatagaagct ggcggggttt tcatcaaaaa
    15421 tgtgaatgat ttatctgcaa atgcagtaat cacaaccgga atcggtaagc caggctccat
    15481 accttgggtt gcagcattaa atgccttaca aaattccata atattcaaac cgcgctgacc
    15541 caaagcagga ccaaccggag gagatggatt ggctttacct gcaggaattt gcagtttaat
    15601 atagccgata attttctttg ccacttaacg aactcctaaa aacgggtaag acgcggaacc
    15661 atttccgctc cccaagttaa tttttgattc tatcctctta ttgctttttt ttcaagtata
    15721 aaaatcagtt aatcttttca acctggctga actccagctc aacgggtgtt tctctaccaa
    15781 atatctgaac agacacgcgt aacttattcc gttcataatt gacctcctca accaccccgt
    15841 taaaatccgc aaacggccct tcatttacac gaacctgttg accgacctca aattcaactt
    15901 ttggtttcgg cttctctatg ccggtctgaa cctgctgtaa aataatttca gcctctctct
    15961 gactaatcgg cgtaggtcta ttagccctcc ctccaataaa accggaaaca cggggggtgc
    16021 tttttacaag atgccaagag tcatctgtca tttccatctc aactagcaca taaccaggat
    16081 atgactttct ttcactaata gtcttacgac cattgcggat atcaacaact ttctctacag
    16141 gcaccagaat ttgtccgaaa taatctccca tctcctcacg ggcaatgcgc tcttccaata
    16201 ttcgttggac attcttctca aaccccgaat acgcctgtac aacataccat tttttcgaca
    16261 tctcaacctt cccttctcag caatacatca aaaaataacc acgaaattgc tgtatctgcc
    16321 gcatagataa atatagaaag cacagcaaca aacactataa caaatacagt cattctgaca
    16381 gcatcttcac gcttaggcca aaccaccttt ttgaattcgg accaagaatt tgagaaatat
    16441 gcaaaaaacc cttccttacc ggaattagat gcagattctt tatcttgaac aaccagttga
    16501 tccactttaa cgttcttttt ttcaggcgta tgttctgtca tattatttat ccatcatagc
    16561 atctgtctat tctcaatcca tgtaaatggc aagagagttt actaaataac aaatacaaaa
    16621 aaaaattaac cggcacaagg ccggttaatt ttttatttgg caggccaaga gggtctcgaa
    16681 cccccaaccc tcggttttgg agaccgatac tctaccaatt gagctattgg cctctaaact
    16741 taagcgataa cagaagaaac cacgccggca cccacggtac g
//
LOCUS       DAWKJW010000024        16740 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.024, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000024 DAWKJW010000000
VERSION     DAWKJW010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16740)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16740)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16740
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.024"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(105..1274)
                     /locus_tag="WJJ54_000620"
     CDS             complement(105..1274)
                     /locus_tag="WJJ54_000620"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEZ7341512.1"
                     /translation="MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAET
                     LVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPD
                     IAQGVNEGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGLL
                     PWLRPDAKAQLTVVYDSESGKVKRIDTVVLSTQHDPEIGYEELKNAVIEQIIKPVLPS
                     ELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVD
                     RSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLV
                     REHFDLRPKGIVQMLDLLRPIYSKSAAYGHFGREEPEFTWERTDKAAALRAAAGL"
     regulatory      complement(1457..1567)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitches modulate the expression of
                     downstream genes in response to levels of
                     S-adenosylmethionine; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            1620..2516
                     /locus_tag="WJJ54_000621"
     CDS             1620..2516
                     /locus_tag="WJJ54_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEZ7341513.1"
                     /translation="MFRLQFGLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGH
                     LAFYLLKEDRARIVANMRQAGMNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMF
                     KAVHGWEHVQQALDKHEGLLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDK
                     IMQAGRVRGKGKTAPTSIQGVKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGK
                     PAYTMTLAAKLAHVKGVKTLFFCCERLPGGQGFDLHIRPVQGELNGDKAHDAAVFNRN
                     AEYWIRRFPTQYLFMYNRYKMP"
     gene            complement(2560..3624)
                     /gene="tsaD"
                     /locus_tag="WJJ54_000622"
     CDS             complement(2560..3624)
                     /gene="tsaD"
                     /locus_tag="WJJ54_000622"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEZ7341514.1"
                     /translation="MLVLGIESSCDETGVALYDTERGLRAHCLHTQMAMHAEYGGVVP
                     ELASRDHIRRLVPLTEGCLAQAGVSYGDIDAVAFTQGPGLGGALLAGSSYANALALAL
                     DKPVIPVHHLEGHLLSPLLAEEKPDFPFVALLVSGGHTQIMAVRGIGDYALLGESVDD
                     AAGEAFDKTAKLLGLPYPGGAKLSELAESGRPEAFVFPRPMIHSDDLQMSFSGLKTAV
                     LTAVEKVREANGSETIPEQTRNDICRAFQDAVVDVLAAKVKKALLQTGFRTVVVAGGV
                     GANRKLRETFGNMTVQIPTPKGKPKHPSEKVSVFFPPMAYCTDNGAMIAFAGAMHLGK
                     GREVGAFNVRPRWPLSEIVR"
     gene            complement(3740..4927)
                     /gene="ccsB"
                     /locus_tag="WJJ54_000623"
     CDS             complement(3740..4927)
                     /gene="ccsB"
                     /locus_tag="WJJ54_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HEZ7341515.1"
                     /translation="MTEHYKTLPEHELLIQKSLISNLNLWDWVFAVLVFAATVFVQTR
                     SGMHMDIYETVMLWASAGIAVFLGWFFKPMRWFVPLSVLLAYAAVGLYGGNIKSAEIF
                     LLRYFLSSQSAIMWQCAFVFFALFAYISGAVLASVKNVPTNTLLGMGTVFAWVSAVAG
                     FTGLLVRWHESYLLRPDAGHIPVSNLYEVFILFLVITALMYLYYESKFAVQKLGGFVF
                     GFMAVVVGFVLWYSVSREAHTIQPLIPALQSWWMKIHVPANFIGYGAFCISAMLGIAE
                     LVSLRAEGKGGKLWLPPSALIDEVMYKAIAVGFLFFTIATILGALWAADAWGRYWSWD
                     PKETWAFIVWLNYAVWLHLRLVAGWRGKVLAWWAIIGLFVTAFAFIGVNMFLSGLHSY
                     GTL"
     gene            complement(4920..6872)
                     /locus_tag="WJJ54_000624"
     CDS             complement(4920..6872)
                     /locus_tag="WJJ54_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein"
                     /protein_id="HEZ7341516.1"
                     /translation="MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGPFWAQIFGF
                     LGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSL
                     LDVKIAPEVAKRYLEVQGFQGKTVSREGGSVLIAAKKGTMNKWGYIFAHVALIVICLG
                     GLIDSNLLLKLGMLTGRIVPDNQAVYAKDFKPESILSASNLSFRGNVNISEGQSADVV
                     FLNADNGILVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNH
                     PLTLHGITIYQASFADGGSDLTFKAWNLGDASREPVVLKATSIHQFPLEIGKHKYRLE
                     FDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAV
                     EYKNYMLPVLQEQDYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGR
                     KRLVADATKGAPAEIREQFMLAAENTLNIFAQKGYLGLDEFITSNIPKEQQDKMQGYF
                     YEMLYGVMNAALDETIRRYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGF
                     SEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSAR
                     SERDLQKEFPKHVESLQRLGKDLNHD"
     gene            complement(7149..7772)
                     /locus_tag="WJJ54_000625"
     CDS             complement(7149..7772)
                     /locus_tag="WJJ54_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c4"
                     /protein_id="HEZ7341517.1"
                     /translation="MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGN
                     SGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAVMKPMVMNLSDQDILNVSAFYAK
                     QQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
                     GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR"
     gene            7978..8607
                     /locus_tag="WJJ54_000626"
     CDS             7978..8607
                     /locus_tag="WJJ54_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HEZ7341518.1"
                     /translation="MNLFQNAKFFTTVNHLKDLPDTPLEIAFVGRSNAGKSSAINTLT
                     NHVRLAYVSKTPGRTQHINFFELQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQ
                     RKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVK
                     KLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAADAAASSPKEN"
     gene            complement(8728..11124)
                     /locus_tag="WJJ54_000627"
     CDS             complement(8728..11124)
                     /locus_tag="WJJ54_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEZ7341519.1"
                     /translation="MIKKILTTCFGLVFGFCVFGVGLVAIAILVTYPKLPSLDSLQHY
                     QPKMPLTIYSADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWG
                     VARAAVGNVVSGSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDK
                     ILELYFNQIYLGQRAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPE
                     RAKLRQKYILNNMLEEKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRQELYE
                     KYGEDAYTQGFKVYTTVRADHQKVATEALRKALRNFDRGSSYRGAENYIDLSKSEDVE
                     ETVSQYLSGLYTVDKMVPAVVLDVTKKKNVVIQLPGGRRVTLDRRALGFAARAVNNEK
                     MGEDRIRRGAVIRVKNNGGRWAVVQEPLLQGALVSLDAKTGAVRALVGGYDFHSKTFN
                     RAVQAMRQPGSTFKPFVYSAALSKGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRY
                     SGYITLRQALTASKNMVSIRILMSIGVGYAQQYIRRFGFRSSELPASLSMALGTGETT
                     PLKVAEAYSVFANGGYRVSSHVIDKIYDRDGRLRAQMQPLVAGQNAPQAIDPRNAYIM
                     YKIMQDVVRVGTARGAAALGRTDIAGKTGTTNDNKDAWFVGFNPDVVTAVYIGFDKPK
                     SMGRVGYGGTIAVPVWVDYMRFALKGKQGKGMKMPEGVVSSNGEYYMKERMVTDPGLT
                     LDNSGIAPQPSRRAKEDDGGAAEGGRQAADDEVRQDMQETPVLPSNTGSKQQQLDSLF
                     "
     gene            11276..12391
                     /locus_tag="WJJ54_000628"
     CDS             11276..12391
                     /locus_tag="WJJ54_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HEZ7341520.1"
                     /translation="MRLFKSLKNPKKTDAKLPKKSSGLNNRAAIGIDIDQHSIKMVQL
                     SGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKLGTSCKNIIASVPQ
                     NLATIEQLTYTDKDAELDLQGFVESSISEVSSISLEEANYDYQVLSQSAAGEAVLAVA
                     SRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAPELAAEKVAIFGVYAA
                     QTYALVIQDGKILYKQETSVSEEQLNQLIQRTYQVTEEKAEEIINSPQKPSDYQESVA
                     NYFNQQITQEIQRVLQFYYTTQTADDMTDIKHILLTGEAARQEGIAQTVASQTNADVQ
                     CVHPARYFADNLKTDKQQFELDAPTLTRAFGLAVRGL"
     gene            12394..12993
                     /locus_tag="WJJ54_000629"
     CDS             12394..12993
                     /locus_tag="WJJ54_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HEZ7341521.1"
                     /translation="MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYL
                     FIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQEKDAFLIKKNKIEELQLKRLQAA
                     KILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
                     SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN"
     gene            12994..13641
                     /locus_tag="WJJ54_000630"
     CDS             12994..13641
                     /locus_tag="WJJ54_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HEZ7341522.1"
                     /translation="MASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFK
                     SQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIP
                     NLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLS
                     RIITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK"
     gene            13659..14204
                     /locus_tag="WJJ54_000631"
     CDS             13659..14204
                     /locus_tag="WJJ54_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HEZ7341523.1"
                     /translation="MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAP
                     TLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDTKRIKETLEKFSLENMRYVGILK
                     SGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
                     LLLNSSDKNTEQAAAPAAEQN"
     gene            14223..16508
                     /locus_tag="WJJ54_000632"
     CDS             14223..16508
                     /locus_tag="WJJ54_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HEZ7341524.1"
                     /translation="MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKV
                     SFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLV
                     LNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQAAAPSTKSAV
                     SVSKPFTPAKQQAAAPFTESVVSVSAPFSPAKQQAAASAKQQTAAPAKQQAAAPAKQT
                     NIDFRKDGKNAGIIELAALGFAGQPDISQQHDHIIVTLKNHTLPTTLQRSLDVADFKT
                     PVQKVTLKRLNNDTQLIITTAGNWELVNKSAAPGYFTFQVLPKKQNLESGGVNNAPKT
                     FTGRKISLDFQDVEIRTILQILAKESGMNIVASDSVNGKMTLSLKDVPWDQALDLVMQ
                     ARNLDMRQQGNIVNIAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKYKNVEEFRS
                     ILRLDNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQV
                     MIEARIVEAADGFSRDLGVKFGATGKKKLKNDTSAFGWGVNSGFGGDDKWGAETKINL
                     PITAAANSISLVRAISSGALNLELSASESLSKTKTLANPRVLTQNRKEAKIESGYEIP
                     FTVTSIANGGSSTNTELKKAVLGLTVTPNITPDGQIIMTVKINKDSPAQCASGNQTIL
                     CISTKNLNTQAMVENGGTLIVGGIYEEDNGNTLTKVPLLGDIPVIGNLFKTRGKKTDR
                     RELLIFITPRIMGTAGNSLRY"
BASE COUNT         4518 a         4768 c         3801 g         3653 t
ORIGIN      
        1 tgtactgtct gcggcttcgt cgccttgtcc tgatttttgt taatccacta tataaaaatg
       61 ccgtctgaac tgttcagacg gcatttttga ttttcaaacc ggaattacag ccccgctgcc
      121 gccctcaatg cagcagcttt gtcggtgcgc tcccaagtga actcaggttc ttcgcggccg
      181 aaatgtccgt aagcggcgga tttactgtaa atcgggcgca agagatcgag catttggacg
      241 atgcctttgg ggcgcaggtc gaaatgttcg cgaactaagg taatcagttt ttcctcgctg
      301 attttgcctg tgccgaaagt gtcgatggaa atcgaagtcg gttcggcaac gccgatggcg
      361 taggaaactt ggatttggca ttgggttgcc aaaccggcgg cgacgatgtt tttcgcaacg
      421 tagcggcagg cgtaagcggc ggaacgatcc actttggacg ggtctttgcc ggagaacgcg
      481 ccgccgccgt gcggagccgc gccgccgtag gtatcaacga tgattttacg gccggtcaaa
      541 ccgcagtcgc cttgcgggcc gccgatgacg aagcggccgg tcgggttgat caggtatttg
      601 gtttcgtcgg tcagcagttc agacggcagg acgggcttga taatctgctc aatgacggcg
      661 tttttcaact cttcataacc gatttccggg tcgtgttgcg tagagaggac gacggtatca
      721 atgcgtttta ctttgccgga ttcgctatcg taaaccacgg tcagttgggc ttttgcgtcg
      781 ggacgcagcc aaggcaggag gccgtctttg cgtaattcgc tttgacgctg catcaggcgg
      841 tggctgtaat agatggcaaa cggcatcagg gtcggggttt cgtcgcaggc atagccgaac
      901 atcaaacctt ggtcgccagc gccttggttc aagtcaatgc cttcgccttc gttcacgcct
      961 tgggcgatgt ccggagattg ctggtcgtag tacacgccga ccgcgcagcc gttggcatca
     1021 aagcccagct cggaggagtt gtagccgatg cgtttgatgg tttcgcgtgc gactttgatg
     1081 tagtccactt gggcggtggt ggtaatttcg cccgccaata cgcacaagcc tgtgttgacc
     1141 aaggtttctg cggcgacacg cgctttgggg tcttgcgcca agatggcatc caaaatcgca
     1201 tcggacactt ggtcggcaac tttatccgga tggccttcgg ataccgattc ggaagtaaac
     1261 agatattcgc tcattgagat tttccttgaa aaacaaacca tcttcttcag acggcatgtt
     1321 gtatgaacat aatgtcgaca gcgggaaata tagcaaaatt tccctattca taccattcag
     1381 ttgagaaata ttcccatttg aatggcactt tggaatctct gcccgtacgt ttcttacagg
     1441 caaaaaaatt cccgcatcaa gcgggtttgg attgctctgg tgagccacat cggcttttca
     1501 accgtccacc ttacttttcc ttttgaaaag caggttggca tggaattccc aactcttaat
     1561 gcagcgcgga tggtagcaga aaagcctttc cgccgcaata cttccctttt tcagacggca
     1621 tgtttcgttt acaattcggg ctgtttcccc ctttgcgaac cgccatgcac atcctgttga
     1681 ccgccctgct caaatgcctc tccctgctgc cactttcctg tctgcacacg ctgggaaacc
     1741 ggctcggaca tctggcgttt taccttttaa aggaagaccg cgcgcgcatc gtcgccaata
     1801 tgcgtcaggc aggcatgaat cccgacccca aaacagtcaa agccgttttt gcggaaacgg
     1861 caaaaggcgg tttggaactt gcccccgcgt ttttcagaaa accggaagac atagaaacaa
     1921 tgttcaaagc ggtacacggc tgggaacatg tgcagcaggc tttggacaaa cacgaagggc
     1981 tgctattcat cacgccgcac atcggcagct acgatttggg cggacgctac atcagccagc
     2041 agcttccgtt cccgctgacc gccatgtaca aaccgccgaa aatcaaagcg atagacaaaa
     2101 tcatgcaggc gggcagggtt cgcggcaaag gaaaaaccgc gcctaccagc atacaagggg
     2161 tcaaacaaat catcaaagcc ctgcgttcgg gcgaagcaac catcgtcctg cccgaccacg
     2221 tcccctcccc tcaagaaggc ggggaaggcg tatgggtgga tttcttcggc aaacctgcct
     2281 ataccatgac gctggcggca aaattggcac acgtcaaagg cgtgaaaacc ctgtttttct
     2341 gctgcgaacg cctgcctggc ggacaaggtt tcgatttgca catccgcccc gtccaagggg
     2401 aattgaacgg cgacaaagcc catgatgccg ccgtgttcaa ccgcaatgcc gaatattgga
     2461 tacgccgttt tccgacgcag tatctgttta tgtacaaccg ctacaaaatg ccgtaacgaa
     2521 aataaaaatg ccgtctgaac aatttcagac ggcattttgt catctgacga tttccgacag
     2581 cggccagcgc ggacggacat tgaacgcacc gacctccctg cccttgccca ggtgcatcgc
     2641 accggcaaag gcaatcatgg caccgttgtc cgtgcagtat gccatcggcg ggaaaaacac
     2701 gctgactttt tcggacggat gtttcggctt gccttttggg gtcgggattt gcaccgtcat
     2761 attgccgaaa gtttcacgga gtttgcggtt tgcaccgacc ccgccggcga ccactacggt
     2821 tctgaaccct gtctgcaaca gggctttttt cactttcgcc gccaacacat cgactaccgc
     2881 atcttgaaac gcacggcaaa tatcgttgcg ggtttgctcg ggaatggttt ccgaaccgtt
     2941 tgcctcacgc actttttcaa cggcagtcaa aacagcggtt ttcaaacctg aaaaactcat
     3001 ctgcaaatcg tcggaatgaa tcatcgggcg cggaaaaaca aacgcttcgg gcctgcccga
     3061 ttccgcaagt tccgacagtt tcgcaccgcc cggatacggc aagcccagca gtttcgccgt
     3121 tttgtcgaat gcctcgcccg ccgcatcatc gacgctctcg cccaaaagcg cgtagtcgcc
     3181 tatgcccctg accgccataa tctgcgtatg cccgcccgaa accagcagcg cgacaaaagg
     3241 aaagtcgggt ttttcctccg ccaacagcgg cgacagcaga tgtccttcca aatgatggac
     3301 gggaataaca ggcttgtcca acgctaaagc cagcgcgttg gcgtagctcg aacccgccag
     3361 cagcgcaccg cccaaaccgg gcccctgcgt aaaggcaacc gcgtcaatgt cgccatacga
     3421 tacgcccgcc tgcgccaaac agccttccgt caacggaaca aggcggcgga tatggtcgcg
     3481 gcttgccagc tccggcacaa ccccgccgta ttcggcgtgc attgccatct gcgtgtgcag
     3541 gcagtgcgcc cgcaatcctc gttcggtgtc atacagcgca acgcctgttt cgtcgcaaga
     3601 agattcgatt cccaatacca acatggtctg atgccgttaa aaactgaaaa acgtattcta
     3661 gcggatttcg gcacgactgc cgtatcccaa aaacggaaca tgccgtctga agcccttcag
     3721 acggcatcgt cgcaccgtat caaagcgttc cgtaagaatg cagcccgctc aaaaacatat
     3781 tcacgccgat aaaggcgaat gcggttacga acaaaccgat aatcgcccac cacgccagca
     3841 ctttgccgcg ccaaccggca accagccgca agtgcagcca aacggcgtaa ttgagccaga
     3901 cgatgaacgc ccacgtctct ttcggatccc aactccaata gcgtccccaa gcatctgccg
     3961 cccacagcgc acccaaaatg gtggcaatgg taaagaacag aaagccgacg gcaatcgcct
     4021 tatacatcac ctcgtcgatc aatgccgacg gcggcagcca cagttttccg ccttttcctt
     4081 ccgcacgcag ggaaaccagt tcggcaatac cgagcatcgc ggaaatgcaa aacgcgccgt
     4141 aaccgataaa gtttgccgga acgtggattt tcatccacca agattgcaat gccggaatca
     4201 gcggctggat ggtatgcgcc tcgcgagaca cgctgtacca caagacgaat ccaaccacga
     4261 ccgccataaa gccgaacacg aagccgccca atttctgtac ggcgaatttg ctctcgtaat
     4321 acaaatacat cagcgcggta atcaccaaaa acaggatgaa cacttcatac aggttggaaa
     4381 ccggaatatg ccccgcatcg ggacggagca gatagctttc gtgccaacgt accagcagac
     4441 cggtaaagcc tgctacggca gacacccatg caaacacggt tcccataccc aacagcgtgt
     4501 tggtcggcac attttttacg cttgccaaaa ccgcgcccga aatataggcg aacagggcga
     4561 agaagacaaa ggcgcactgc cacatgatcg ccgactggct gctgaggaaa taccgcaaca
     4621 ggaaaatctc tgccgatttg atgttgccgc catacagacc gacggcggca taggcaagca
     4681 atacgcttaa aggaacaaac cagcgcatcg gcttgaaaaa ccagcccaaa aatacggcaa
     4741 taccggcact cgcccacaac atgaccgttt cgtaaatgtc catatgcata ccggaacggg
     4801 tctgtacgaa aaccgtagcc gcaaaaacca gcacggcaaa tacccaatcc caaagattca
     4861 gattgctgat caaagacttc tgaatcagca gctcgtgttc cggaagggtt ttatagtgtt
     4921 cagtcatgat tcaagtcctt gccgagccgt tgcagactct cgacgtgttt tggaaattcc
     4981 ttctgcaaat cccgttcact gcgggccgaa gacatggcaa aacggatttt gccgtctgaa
     5041 aacaataccc acgcccgttt ttcgcgcaca taaaacatca ataccgtacc caataccaac
     5101 agcaccgagc cgagatagac caaaagcgca cccggggaac gggtcatctg caaacccgac
     5161 gaacgcacct cggaaaaccc atcaagttgc agcagcatag gcgcgggata ttcggtcaaa
     5221 cccgtgtacg catccatact gtgcagcagg aaacggttcc gcgcttcatc ctgctgccat
     5281 tcgggcaagc cgtaccggcg tatggtttca tccaaagcag cgttcatcac gccgtaaagc
     5341 atttcgtaga aataaccctg catcttatcc tgctgctctt tcgggatatt ggacgtaata
     5401 aattcgtcca atcccaaata gcctttttgt gcaaagatgt tcagcgtgtt ttccgcagcc
     5461 agcatgaatt gttcgcggat ttcggcaggt gcgcctttgg ttgcgtcggc aaccagacgt
     5521 ttgcgccctt ccccatcttt caaaaactca cgcaatgcca taaaggtgtc cgctttcaac
     5581 tgcttgtcca aggggatacg cagccagcgg tattgctgct gcaagccgct gcgcgtgccg
     5641 gtaatccaaa aataatcctg ttcctgcaaa accggcagca tatagttttt atattcgacc
     5701 gcctgccctg ccgcatcacg gatacggtaa acaatggaag ggccgatatt ggtgtatttt
     5761 ttaccttcct gagtaacggc gcggacatcg ttcagcgtgg atttcaggct tttttcccgt
     5821 tccgcgccct cgctcatgtc ctccacattc atagaagtga actgatcgaa ctcaagacga
     5881 tatttgtgtt tgccaatttc caacggaaac tggtgtatgg atgttgcctt caacacgaca
     5941 ggctcgcgcg aagcatcacc caaattccac gccttgaatg tcaaatccga accgccgtcg
     6001 gcaaaactcg cctgataaat cgtgatgccg tgcaaggtca aaggatggtt cacgcggatg
     6061 gtgcgctcga gtttctcacc ggttgcctta tccgttactt caatatcact ggcaaaatcg
     6121 cgcggcatac ccgtattgta aaaatcgata tggaattttt tcagtttgac ttcaaaaggc
     6181 aagtcctgaa ccaatatccc gttgtcggca ttcaggaaaa ccacatccgc actctgcccc
     6241 tcggaaatat tgacgttgcc cctaaatgag agattggacg cactcaaaat actttcgggc
     6301 ttgaaatcct tggcataaac cgcctgattg tccggaacaa tccgaccggt cagcataccc
     6361 agtttcaaca gcaggttact gtctatcaac ccgcccaggc aaatgacaat caaagcaaca
     6421 tgggcaaaga tatagcccca tttgttcatc gtgccttttt tggcggcaat cagaaccgac
     6481 ccgccctcac ggctgacggt ttttccctga aaaccctgca cctccagata acgtttggca
     6541 acctcgggcg caatttttac atccaacagc gaagaatggc gcatcgccgc cagagatttt
     6601 tctttaacct tttcccgaaa agacttcatt tcgcgccaga acggcggcac attgcgaatc
     6661 aggcacaaac tggtagaaac caccaaaaac atcatgataa cgacaaacca tgccgaagca
     6721 tagacgtcat acagtcccag aaaaccaaaa atctgcgccc aaaaaggtcc gaatttgacc
     6781 aaataatccg tctgcggctg gttttgctgc aacaccgtac cgataaccga tgcaataccc
     6841 agcagactga gcaaagcgac tgcaaagcgc atggagctga aaaaagcgaa ccacggacgg
     6901 gaaagaagtg ggggagatct acgggattta ctcattgtgt gtttattccg ccatcaggaa
     6961 tatgggaaag cagaattggg caaacagaaa acaacgtccc gattctactg tcttgatgct
     7021 ttttatttca agacaatgaa gacagcctgc atcgattcca acggttgcga ttgaaaaaac
     7081 ttatcgcaga attgcctgaa gccgtctgaa aacttttcag acggcctcta aaacagacta
     7141 ttgcggaatt aacgcaaacc ttggataaag ttggcgaccg ctttcaaatc ttcttcagac
     7201 atacggtttg caatatcttc catgatggta tttttacgct gaccggactt gtaggcattc
     7261 atctgttcaa caatatatgc ctgatgctga ccgcccaaac gcggataagc ctgaatttcg
     7321 cttccgcctc ccggcatacc cgcaccgctc ggaccgtggc aggacataca cgccggcact
     7381 tttttatcgc tcaaaccgcc gcgatagatt ttcgcgccca attcgggatt ttccttagga
     7441 ttggcttcac cggatttggg ctgctgtttg gcatagaatg cggatacgtt caaaatatcc
     7501 tgatcgctca aattcattac catcggtttc atcacagctg ccgaaccgtg ggtgcgtttg
     7561 ccgtctcgga taccgatggt ttgatgatag atgtaagcag tatgctgtgc cgccaaacgc
     7621 ggatacatcg caatgccgct gttaccgtct gctgcatggc aagccgcaca aaccgttgcg
     7681 gcaacctgtt tgcctttttc cacgtctgct ttgggagagg cggaaaccgc accggcagcc
     7741 aaaacaaagg ccaataaagt caatcgtttc atggagtgct cctgattaca gcattggata
     7801 acgcaacaat gctcttttta tattcaaata cgggattttt gacccgatta aaaccgatga
     7861 ttctgtaaac gtgttattct atactaaatt tacattaaat taccactgtg tttcacataa
     7921 aaccaaccgc atatttttgc tgtcggacaa acggcggcgg aaaacaagga tatgcccatg
     7981 aacctttttc aaaacgccaa attcttcacg acggtaaacc atctcaaaga cctgccggac
     8041 acaccgctcg aaattgcctt tgtcggcagg agcaatgccg gaaaatccag tgccatcaat
     8101 accctgacca accatgtccg tcttgcctac gtttcaaaaa cacccggacg gacgcagcat
     8161 atcaacttct tcgagctgca gaacggcaat tttatggtcg atttgcccgg ctacggttat
     8221 gcccaagtcc ccgaagcagt acgcgcacat tgggtcaatc tgctcggcga ctatctgcaa
     8281 cagcgcaaac agcttatcgg gctggttttg attatggatg cccgccatcc tttaaaagaa
     8341 ctcgacatcc gtatgctgga ttttttccac acgaccggca gaccggttca catcctgctg
     8401 tcaaaagccg acaaattatc caaaaacgaa cagataaaaa ccctgtccca agtcaaaaaa
     8461 ctgctcaaac cttattccga caggcaaaac atcagcgtac agctgttttc cagcctgaaa
     8521 aaacaaggta ttgacgaggc caaccgaact gtcggaagct ggtttgacgc agcagatgcc
     8581 gccgcttcct ctccaaagga aaactgaccc caattatacg gaaaccgtat ttcccccact
     8641 tgaccgaccg caaacattta aaaaattgcc actgccaaat ctaaaatgcc gtctgaaaag
     8701 tctttcagac ggcattttgc ggagtcttta aaacagagaa tccaactgct gctgtttgga
     8761 accagtatta ctcggaagca ccggcgtttc ctgcatatct tggcggactt cgtcatccgc
     8821 cgcctgccgt ccgccttctg ccgcgccccc gtcatcttct tttgcccgtc gggaaggttg
     8881 cggcgcaata ccgctgttgt ccagcgtcaa gcccggatcg gttaccatac gttccttcat
     8941 atagtattcg ccattgctgc tgaccacacc ttcaggcatt ttcatcccct tgccctgctt
     9001 tcctttcaac gcaaaacgca tatagtccac ccaaaccggc accgcaatcg taccgccgta
     9061 gccgacacgc cccatactct taggtttgtc gaagccgata tatacggcag taaccacatc
     9121 agggttaaaa ccgacaaacc acgcatcctt attgtcattg gtcgtacccg ttttaccggc
     9181 aatatccgtt cttcccaacg cagctgcccc ccttgccgta ccgacacgga ccacatcctg
     9241 cataatctta tacataatat aggcattgcg cggatcgatt gcctgaggcg cattttgccc
     9301 agccaccaaa ggttgcattt gggcgcgcaa cctgccgtct ctgtcataaa tcttatcgat
     9361 tacgtgcgaa gaaaccctat atccgccgtt cgcaaatacg ctatatgcct ccgccacttt
     9421 caacggcgtt gtctcgcccg tacctaaagc catagacagg cttgccggca gctcggacga
     9481 cctgaagccg aaacgccgga tatactgttg cgcgtaaccg acaccgatag acatcaaaat
     9541 acggatggaa accatattct tggaagccgt cagagcctgt ctcaaagtaa tgtagccgga
     9601 atatctgccg tctgaatttt taggtgtcca aaccgaaccg ttcggccctt tccccggcag
     9661 ggaaatcggc gcatcgttaa ccaccgtgga cgcggtcatc cccttagata atgccgccga
     9721 atagacaaac ggcttaaagg tcgaacccgg ctgccgcatt gcctgaacgg cacgattgaa
     9781 tgttttgctg tgaaaatcat aaccgccgac cagcgcgcgc acagctccgg tttttgcatc
     9841 cagcgaaacc aaagccccct gcagcaacgg ctcttgaacc accgcccaac gcccgccgtt
     9901 gtttttgaca cggatgaccg cgcccctgcg gatacggtcc tcccccattt tttcattatt
     9961 gaccgcgcgg gccgcaaagc ccaaggcgcg cctatcaagc gtaacccgcc tgccgccggg
    10021 cagctgtatg acgacatttt tctttttagt cacatccaac acaacggcgg gaaccatttt
    10081 atcgacggta tagagtcccg acagatactg gctgacagtc tcctcgacat cttcactctt
    10141 actcaaatcg atatagtttt ccgcaccgcg gtagctgctg ccgcgatcga aattccgtag
    10201 agccttgcgc aatgcctcgg ttgccacctt ctgatgatcg gcgcggaccg tggtataaac
    10261 cttaaaaccc tgcgtatagg catcttcacc gtatttctca tacagttcct gacgcaccat
    10321 ttccgccaca tataaagcac tctgatcgat tttccgaaca aaccgctcgt aatgcagttc
    10381 ctcattcaac gcctgatcgc gctgttgcac ggtaatcatc ttctcctcga gcatattgtt
    10441 caaaatatac ttctggcgca acttggcacg ttccggatta acaatcggat tataggcaga
    10501 cggagccttg ggcagtcccg caagcatggc ggcttccgcc aaagtcaaat ctcggacatt
    10561 cttattgaaa tagatttgcg cggcagatgc aaaaccatag gcgcgctgac cgaggtaaat
    10621 ctgattgaaa tacaactcga ggattttgtc tttgcttaaa gactgctcga ttttataggc
    10681 aagcaacacc tcattgaatt tgcgtgtgaa cgttttttca ctgctcaaat aaaaattttt
    10741 cgccacctgc tgcgtaatcg tactcgcacc cgactgcacg ctgccggaca cgacattgcc
    10801 gacggcagcg cgggcaacac cccaaacatc caccccccaa tgccggtaaa agcgtttatc
    10861 ctcggcggcg ataaccgcat tccgcaacac ctctgggaaa tcgccgattt ttgtaaattc
    10921 gcgccgctgc tccccataca taccgatgac ttccccatcc gccgaataaa tagtcaacgg
    10981 cattttaggc tggtaatgct gcaaagaatc caaagacggc agtttcggat acgttaccaa
    11041 aatagcaatg gcaaccaaac ccactccaaa tacacaaaac ccaaaaacca aaccaaaaca
    11101 agtcgttaaa atctttttaa tcatagctga ataataattt accattattg gtattaaata
    11161 aagtaaaata gcaaccgatt tctacaaagc acggtttcaa tgtgcaaaga acaaggaatc
    11221 cattacggat accgaaacgg ttactcactg tacaaataaa gcaggaactt tcatcatgcg
    11281 cttgtttaaa agcttgaaaa accctaaaaa aacagatgcc aagctcccta aaaaatcttc
    11341 gggactcaat aaccgcgcgg caatcggcat cgatatcgac cagcattcca tcaaaatggt
    11401 ccaattgtca ggacgtagtt taaaccaaat tcaattggaa aaatacgtca ttgccaaatt
    11461 accaaagaat atcattcaag gcaataaagt ccaaaattac gatcaacttg ttacatattt
    11521 gcaacaagcc tatgccaaac tgggtacttc gtgcaaaaac atcatcgcgt ccgtcccgca
    11581 aaatctggca accatcgaac aattgaccta cacagacaaa gatgcagaat tagacctgca
    11641 ggggttcgtg gagtcctcca tctccgaagt cagctcgata tcgctcgaag aagccaatta
    11701 cgactatcag gtcttgtccc aatcggccgc cggcgaagct gtgttggccg tcgcatcgag
    11761 aaaggatgaa atcgaacccc tgattgacgc attcaacgcc gccggtatga aattatccgc
    11821 gcttgatgtg gacattttcg gacaatacaa cgcctacgcg ctatggataa accatttcgc
    11881 ccccgagctt gcagccgaaa aagtcgccat tttcggcgta tatgccgcac agacctacgc
    11941 cttggtcatc caagacggaa aaatcctata caaacaggaa acctccgtca gcgaagaaca
    12001 gctcaaccaa ctcatccagc gcacctatca ggtaacagaa gaaaaagcgg aagaaatcat
    12061 caactccccg caaaaacctt ccgattacca agaaagcgtg gcaaactatt tcaaccagca
    12121 gattacccaa gaaatacaaa gggtcttgca gttttattac accacgcaga ccgcagacga
    12181 tatgaccgac atcaagcata tcctgctgac cggggaagcg gcgcgccagg aaggtatcgc
    12241 ccaaaccgtc gcctcacaaa ccaatgcaga tgtacaatgc gtccatcccg cgcgttattt
    12301 tgcggacaac ctcaaaacag acaaacaaca attcgaactt gatgcgccga cactgaccag
    12361 ggcgttcggt ttggcggtac ggggattata attatgaaca atttaatcaa aatcaacctc
    12421 ctcccctaca gggaagagat gaacaagcgc aaacagcagc agtttaaaac gctgatgtac
    12481 ggtgccgtgc tgacgggcgt tgccgccgtt gcggcaacct acctgtttat cgacaatatg
    12541 atcaataacc agtcggaaag aaacacgctg ctggaaacct ccatcgcaca cttggatacc
    12601 gagctgtcgg aaatacaaaa gctcaaacag gaaaaagatg ccttcctgat taagaaaaac
    12661 aaaatcgagg agctccagct caaacgcctc caagccgcaa aaatcctcga cagcctgaat
    12721 gaggccgtcc ccggaagcac ctacctgacc tcgctggatg ccgttaccgc cgactcttat
    12781 cggctcagcg gcaggacatc cagcgacaac cgcgttgccg ccatgatgag ggcgatgccc
    12841 aataccggca tattcaagca acccgaattg ttaagcatca agaaaaacaa ttcgcatcaa
    12901 gaatttaccc ttcaggcaac attacaaccc atcgtaaagg cggccgaatc caaagagaat
    12961 ccggcttcgg gaaacgcaca ggaggcaaac tgaatggctt ctaaatcatc taaaaccaac
    13021 ttggatctca acaaccttca cctgctcaac cttcctgcca ggctttttat cgccctgctg
    13081 gccgttgccg ccgtgctggg gctcggttat gccggattgt tcaaaagcca gatggaatcc
    13141 cttgaggaat acgaagcaaa agaaaccgaa ctgaaaaaca cctacaaaca gaaaagtatc
    13201 gacgcggcca gcctgaacaa cctgagggac gaacttgcct caatccgctc tgccttcgat
    13261 atcatgttga aacagctgcc gacagatgca gaaattccca acctggttca agagcttcat
    13321 caggcaggtt cgagcaacgg cctgcgcttg gacagcgtta tgccccaacc tcccgtagat
    13381 gacggcccca tcaaaagatt accctattcc atttccatta ccggaaatta cgaacagatc
    13441 agccaattta cccgcgatgt cggcagcctc tcccgaatca ttacccttga gtcgctgaaa
    13501 atcgcccaat ctccggaaaa cggcggcaat cctgacggca agagcagcat cctgaacctc
    13561 agtgccattg ccaccaccta ccaagcaaaa tccgtagaag agcttgccgc agaagcggca
    13621 caaaatgccg agcaaaaata acttacgtta gggaaaccat gaaacactat gccttactca
    13681 tcagctttct ggctctctcc gcgtgttccc aaggttctga ggacctaaac gaatggatgg
    13741 cacaaacgcg acgcgaagcc aaagcagaaa tcataccttt ccaagcacct accctgccgg
    13801 ttgcgccggt atacagcccg ccgcagctta cagggccgaa cgcattcgac ttccgccgca
    13861 tggaaaccga caaaaaaggg gaaaatgccc ccgacaccaa gcgtattaaa gaaacgctgg
    13921 aaaaattcag tttggaaaat atgcgttatg tcggcatttt gaagtctgga cagaaagtct
    13981 ccggcttcat cgaggctgaa ggttatgtct acactgtcgg tgtcggcaac tatttgggac
    14041 aaaactacgg tagaatcgaa agcattaccg acgacagcat cgtcctgaac gagctgatag
    14101 aagacagcac gggcaactgg gtttcccgta aagcagaact gctgttgaat tcttccgaca
    14161 aaaacaccga acaagcggca gcacctgccg cagaacaaaa ttaagaagag gattactcca
    14221 ttatgaatac caaactgaca aaaatcattt ccggtctctt tgtcgcaacc gccgcctttc
    14281 agacagcatc ggcaggaaac attacagaca tcaaagtttc ctccctgccc aacaaacaga
    14341 aaatcgtcaa agtcagcttt gacaaagaga ttgtcaaccc gaccggcttc gtaacctcct
    14401 caccggcccg catcgccttg gactttgaac aaaccggcat ttccatggat caacaggtac
    14461 tcgaatatgc cgatcccctg ttgagcaaaa tcagtgccgc acaaaacagc agccgtgcgc
    14521 gtctggttct gaatctgaac aaaccgggcc aatacaatac cgaagtacgc gggaacaaag
    14581 tttggatatt cattaacgaa tcggacgata ccgtgtccgc ccccgcacgc cccgccgtaa
    14641 aagccgcgcc tgccgcaccg gcaaaacaac aggctgccgc accgtctacc aagtccgcag
    14701 tatccgtatc caaacccttt accccggcaa aacaacaggc tgccgcaccg tttaccgagt
    14761 ccgtagtatc cgtatccgca ccgttcagcc cggcaaaaca acaggcggcg gcatcagcaa
    14821 aacaacagac ggcagcacca gcaaaacaac aggcggcagc accagcaaaa caaaccaata
    14881 tcgatttccg caaagacggc aaaaatgccg gcattatcga attggctgca ttgggctttg
    14941 ccgggcagcc cgacatcagc caacagcacg accacatcat cgttacgctg aaaaaccata
    15001 ccctgccgac cacgctccaa cgcagtttgg atgtggcaga ctttaaaaca ccggttcaaa
    15061 aggttacgct gaaacgcctc aataacgaca cccagctgat tatcacaaca gccggcaact
    15121 gggaactcgt caacaaatcc gccgcgcccg gatactttac cttccaagtc ctgccgaaaa
    15181 aacaaaacct cgagtcaggc ggcgtgaaca atgcgcccaa aaccttcaca ggccggaaaa
    15241 tctcccttga cttccaagat gtcgaaatcc gcaccatcct gcagattttg gcaaaagaat
    15301 ccgggatgaa cattgttgcc agcgactccg tcaacggcaa aatgaccctc tccctcaaag
    15361 acgtaccttg ggatcaggct ttggatttgg ttatgcaggc acgcaacctc gatatgcgcc
    15421 aacaagggaa catcgtcaac atcgcgcccc gcgacgagct gcttgccaaa gacaaagcct
    15481 tcttacaggc ggaaaaagac attgccgatc tgggcgcgct gtattcacaa aacttccaat
    15541 tgaaatacaa aaatgtggaa gaattccgca gcatcctgcg tttggacaat gccgacacaa
    15601 ccggaaaccg caatacgctt gtcagcggca ggggcagcgt gctgatcgat cccgccacca
    15661 ataccctgat tgttaccgat acccgcagcg tcatcgaaaa attccgcaaa ctgattgacg
    15721 aattggacgt acccgcgcaa caagtgatga ttgaggcgcg tatcgtcgaa gcggcagacg
    15781 gcttctcgcg cgatttgggc gttaaattcg gcgcgacagg caagaaaaag ctgaaaaatg
    15841 atacaagcgc attcggctgg ggggtaaact ccggcttcgg cggcgacgat aaatgggggg
    15901 ccgaaaccaa aatcaacctg ccgattaccg ctgccgcaaa cagcatttcg ctggtgcgcg
    15961 cgatttcctc cggtgccttg aatttggaat tgtccgcatc cgaatcgctt tcaaaaacca
    16021 aaacgcttgc caatccgcgc gtgctgaccc aaaaccgcaa agaggccaaa atcgaatccg
    16081 gttacgaaat tcctttcacc gtaacctcaa tcgcgaacgg cggcagcagc acgaacacgg
    16141 aactcaaaaa agccgtcttg gggctgaccg ttacgccgaa catcacgccc gacggccaaa
    16201 tcattatgac cgtcaaaatc aacaaggact cgcctgcgca atgtgcctcc ggtaatcaga
    16261 cgatcctgtg tatttcgacc aaaaacctga atacgcaggc tatggttgaa aacggcggca
    16321 cattgattgt cggcggtatt tatgaagaag acaacggcaa tacgctgacc aaagtccccc
    16381 tgttgggcga catccccgtt atcggcaacc tctttaaaac acgcgggaaa aaaaccgacc
    16441 gccgcgaact gctgattttc attaccccga ggattatggg tacggccggc aacagcctgc
    16501 gctattgatg cgtcaaaata agggcatatg ttttacggca tatgcccttt ctttatgctt
    16561 tttgccgcga ccgaaatgcc gtcattcccg cgcaggcaga aatccaactt gtccggttcc
    16621 ggttgttttt cgtctcgtaa cttttgagcc gtcattcccg cgaaagcgga aatccagtcc
    16681 gttcagtttc ggtcatttcc gataaattcc tgttgctttt catttctgga ttcccacttt
//
LOCUS       DAWKJW010000025        16572 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.025, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000025 DAWKJW010000000
VERSION     DAWKJW010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16572
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.025"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            208..1272
                     /locus_tag="WJJ54_000633"
     CDS             208..1272
                     /locus_tag="WJJ54_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-butanediol dehydrogenase"
                     /protein_id="HEZ7341525.1"
                     /translation="MKAARFYDKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEF
                     MEGPIFIPPCGHPHPISGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIIRD
                     DVPTGEGSNYHLSKDMNFIGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLS
                     VGHHAYVRSGAKAGDVALVGGAGPIGLLLAAVLKAKGIKVIITELSKARKDKARESGV
                     ADYILDPSEVDVVEEVKKLTNGEGVDVAFECTSVNKVLDTLVEACKPAANLVIVSIWS
                     HPATVNVHSVVMKELDVRGTIAYCNDHAETIKLVEEGKINLEPFITQRIKLDELVSEG
                     FERLIHNNESAVKIIVSPNL"
     gene            1413..1736
                     /locus_tag="WJJ54_000634"
     CDS             1413..1736
                     /locus_tag="WJJ54_000634"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HEZ7341526.1"
                     /translation="MGDSVLSAIQQTITQRKSANPSESYVAQLLHKGEDKILKKVIEE
                     AGEVLMASKDKNPSHLVYEVADLWFHTMILLTHHDLKAEDVLDELARRQGLSGLAEKA
                     ARTES"
     gene            1808..2131
                     /locus_tag="WJJ54_000635"
     CDS             1808..2131
                     /locus_tag="WJJ54_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEZ7341527.1"
                     /translation="MDNCIFCKIAAKDIPAQTVYEDGEMVCFKDINPAAPVHLLLIPK
                     VHFDSLAHAAPEHQPLLGKMMLKVPEIAKAAGLADGFKTLINTGKGGGQEVFHLHIHI
                     MGTPV"
     gene            2178..2381
                     /gene="tatA"
                     /locus_tag="WJJ54_000636"
     CDS             2178..2381
                     /gene="tatA"
                     /locus_tag="WJJ54_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HEZ7341528.1"
                     /translation="MGSFSLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLN
                     EGTDGKEAQKDDVIEHKKDEDKA"
     gene            2385..3071
                     /gene="tatB"
                     /locus_tag="WJJ54_000637"
     CDS             2385..3071
                     /gene="tatB"
                     /locus_tag="WJJ54_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatB"
                     /protein_id="HEZ7341529.1"
                     /translation="MFDFGLGELVFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVG
                     SVKQEFDTQIELEELRKAKQEFEAAAAQVRDSLKETGTDMQNSLHDISDGLKPWEKLP
                     EQRTPADFGVDENGNPFPDAANTLSDGISDVMPSERSDTSAETLGDSGQTGSTAEPAE
                     TDQDRAWREYLTASAAAPVVQTVEVSYIDTAVETPVPHTTSLRKQAISRKRDLRPKSR
                     AKPKLRVRKS"
     gene            3085..3855
                     /gene="tatC"
                     /locus_tag="WJJ54_000638"
     CDS             3085..3855
                     /gene="tatC"
                     /locus_tag="WJJ54_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEZ7341530.1"
                     /translation="MSETQNEQPVQPLVEHLIELRRRLMWTVVGILVCFFGLMPFAQQ
                     LYTFIADPLMANLPKDTSMIATDVIAPFFVPVKVTLMAAFLISLPHTLYQIWAFVAPA
                     LYQNEKRLITPLVLSSVSLFFIGMAFAYFLVFPVIFKFLASVTPVGVNMATDIDKYLS
                     FILGMFVAFGTTFEVPIVVILLTKISVVTTGQLKRARPYVIVGAFVIAAIITPPDVIS
                     QTLLAIPLILLYEAGIWFGRFFTPRSEQDGDIQPPATT"
     gene            3908..4516
                     /gene="maf"
                     /locus_tag="WJJ54_000639"
     CDS             3908..4516
                     /gene="maf"
                     /locus_tag="WJJ54_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HEZ7341531.1"
                     /translation="MNTLYLGSNSPRRMEILTQLGYRVIQLPAGIDESVKADETPACY
                     VQRMAAEKNQTALALFLETNGAMPDFPLITADTCVVSDGIILGKPRSQAEAIEFLNRL
                     SGKQHTVLTAVCIHYRGKTSSRVQTNRVVFKPLSSEEISAYVQSGEPMDKAGAYAVQG
                     IGGIFIQSIEGSFSGIMGLPVYETVSMLQDLGYRSPLSALKP"
     gene            4525..4878
                     /locus_tag="WJJ54_000640"
     CDS             4525..4878
                     /locus_tag="WJJ54_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HEZ7341532.1"
                     /translation="MNRQTAYLLTSFSLIALIILSLSWELWIAPLRPGGSWLALKALP
                     LCLPLSGILKKKIYTYQYSSMLVLIYFAEAVMRLFDAYPAEQICAALSAVFSIIFFIS
                     CLSFVKQYKETNNAR"
     gene            4868..6682
                     /locus_tag="WJJ54_000641"
     CDS             4868..6682
                     /locus_tag="WJJ54_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase C-terminal domain-containing
                     protein"
                     /protein_id="HEZ7341533.1"
                     /translation="MPAETTVSGAHPAAKLPIYILPCFLWIGIVPFTFALKLKPSPDF
                     YHDAAAAAGLIVLLFLTAGKKLFDVKIPPISFLLFAMAAFWYLQARLMNLIYPGMNDI
                     VSWIFILLAVSAWACRSLVAHFGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWEDTPL
                     LQNLIVYSGQGVIGHIGQRNNLGHYLMWGILAAAYLNGQRKIPPALGAICLIMQTAVL
                     GLVNSRTILTYIAAIALILPFWYFRSDKSNRRTMLGIAAAVFLTALFQFSMNTILETF
                     TGIRYETAVERVANGGFTDLPRQIEWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQH
                     NIYDNLLSNLFTHSHNIVLQLLAEMGISGTLLVAATLLTGIAGLLKRPLTPASLFLIC
                     TLAVSMCHSMLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFA
                     GLLHLDWTYTRLVNAFSPATDDSAKTLNRKINELRYISANSPMLSFYADFSLVNFALP
                     EYPETQTWAEEATLKSLKYRPHSATYRIALYLMRQGKVAEAKQWMRATQSYYPYLMPR
                     YADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEAKPCK"
     gene            6872..7549
                     /locus_tag="WJJ54_000642"
     CDS             6872..7549
                     /locus_tag="WJJ54_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEZ7341534.1"
                     /translation="MSRVLLVDDDALLTELLTEYLSAEGLNVRSVPDGEAGVQEILSG
                     QYDVVVLDSMMPKMNGLDVLKNVRARSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKP
                     CTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKDMPLELTSTEF
                     NLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGL
                     GYLFVKN"
     gene            7563..8969
                     /locus_tag="WJJ54_000643"
     CDS             7563..8969
                     /locus_tag="WJJ54_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEZ7341535.1"
                     /translation="MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTI
                     ETTLMGSIISAFRARGDAGAREILTEWKDSPVSSGVYVIQGDEKKDILNRYIDSYTIE
                     RARLFAAGHPHSNLVHIEYDRFGEEYLFFTKDWDKLQARRLPSPLLIPGLPLAPIWHE
                     LIILSFIIVVGLLMAYILAGNIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSH
                     LAIQFDKMVEKLEKLVAKERHLLHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRL
                     EGELTRMDTLAGELLTLSRLETSNMALEKESLKLLPFLGNLVEDNQSIAQKNGQTVTL
                     SADGKIPENTTILANESYLYRAFDNVIRNAVNYSPEGSTILINIGQDHKHWIIDVTDN
                     GPGVDEMQLPHIFTAFYRADSSANKPGTGLGLALTQHIIEQHCGKIIAENIKPNGLRM
                     RFILPKKKTGSKTEKSAN"
     gene            9087..11513
                     /locus_tag="WJJ54_000644"
     CDS             9087..11513
                     /locus_tag="WJJ54_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetate--CoA ligase family
                     protein/GNAT family N-acetyltransferase"
                     /protein_id="HEZ7341536.1"
                     /translation="MSAQTDPGYFFMPNHIILIGASERPYSLGERVLSNLLSTPFQGK
                     ITPVNPRHHTIAGLPAYTSLNKIPGNADLIIAVTLPDSYDTLFKTCRKKQLRHIILIQ
                     DWDSLSAAELHTAETAIRKHHGNGLNITACTTAGIQLPSLGLNISTQDGYAAGHTAIL
                     TGNAAVSRQIDNILNKLRQGTSRHISLHPGISPITSADWLNRFGHSLHTKTAVLHHNP
                     EEDQRKLFSAIRQFTRHTPLILHITCRTTETDRAVLHCLARHCNFLISFNADDLEAAL
                     RAQLSDLPPLSRLDILSDTPAEWLNAHAPKTLALHFPNLPHHIRNGHLTGTPTPSICH
                     DIASRQLARPDTQAVLTILSPSGHEDYKKTARALIRLSEQTAKPLLVSSPFSDGITHF
                     DTPTQAIRTLSYRNTAAALKQAQLDIAPPQPCRLKTPQPQNIKKALEAADPALIAEAL
                     HLPPYRHTTHNAVQFQFGSHSLYGDILTARCNGQTTAVLPPFTTLDSRHLARFAELDG
                     TQTLDQFLHTLTIIPEYRQHILGITLNLNGGQYSSDFILKTPETHDTPKRKNTGKAAQ
                     TLEHAAAKMQSAAAYLKHKNPTAAEFLRHTSEAAAELLGSKTETGAAVPNVLAPYPAA
                     HLKTLSLRNNTTVTITPILPEDAEAKQQFVRSLGPEARYTRFMTHTNELPAATLARLC
                     NPDYHCEAAWTAKDADSNIVAVVRHSRLNRNECEFGITLAEHMRGSGLAQKMMELIIQ
                     TAAQQGYRTMSADILKTNTPMIKLAEKSGFTLKESDTEKNLYRAYLNLAADKTTEKTN
                     KNLRTDHKIT"
     gene            11558..11803
                     /gene="rpsP"
                     /locus_tag="WJJ54_000645"
     CDS             11558..11803
                     /gene="rpsP"
                     /locus_tag="WJJ54_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEZ7341537.1"
                     /translation="MVVIRLARGGSKHRPFYNVIVTDSRSRRDGRFIERVGFYNPVAN
                     EKQERVRLNADRLNHWIAQGAQVSDSVAKLIKEQKAA"
     gene            11819..12328
                     /gene="rimM"
                     /locus_tag="WJJ54_000646"
     CDS             11819..12328
                     /gene="rimM"
                     /locus_tag="WJJ54_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEZ7341538.1"
                     /translation="MTDTQNRVAMGYIKGVFGIKGWLKIAANTEYSDSLLDYPEWHLV
                     KDGKTVSVTLEAGKVVNSELQVKFEGINDRDLAFSLRGYTIEIPREAFAPTEEDEYYW
                     TDLVGMTVVNKDHTVLGKVSNLMETGANDVLMIDGEHGQILIPFVSQYIETVDTGSKI
                     ITADWGLDY"
     gene            12328..13077
                     /gene="trmD"
                     /locus_tag="WJJ54_000647"
     CDS             12328..13077
                     /gene="trmD"
                     /locus_tag="WJJ54_000647"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEZ7341539.1"
                     /translation="MLIQAVTIFPEMFDSITRYGVTGRANRQGIWQFEAVNPRKFADN
                     RLGYIDDRPFGGGPGMIMMAPPLHAAIEHAKAQSSQAAKVIYLSPQGKPLTHQKAVEL
                     AELPHLILLCGRYEGIDERLLQSSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGVL
                     GDMQSAEQDSFSSGILDCPHYTKPLEFQGMAVPEVLRSGNHGLIAEWRLEQSLRRTLE
                     RRPDLLEKRSLIPKESRILNKILQEQREIQS"
     gene            13093..13458
                     /gene="rplS"
                     /locus_tag="WJJ54_000648"
     CDS             13093..13458
                     /gene="rplS"
                     /locus_tag="WJJ54_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEZ7341540.1"
                     /translation="MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQA
                     YEGVVIARRNRGLNSNFIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYL
                     RGLTGKAARIKEKLPARKG"
     gene            13780..14505
                     /locus_tag="WJJ54_000649"
     CDS             13780..14505
                     /locus_tag="WJJ54_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEZ7341541.1"
                     /translation="MSIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTF
                     LKSLMGLQPIDTGSIRLDGLTRQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFK
                     GINTAQKQRVHEALERVGMRQFARRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFN
                     AVDARTTYELLDVLQKCHCGGHAIIAVLHDYEQVRAYFPNTLLLAREKIAAGATETIL
                     TEPYLAQANAKMQQQESPEWCAS"
     gene            14529..15404
                     /locus_tag="WJJ54_000650"
     CDS             14529..15404
                     /locus_tag="WJJ54_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEZ7341542.1"
                     /translation="MNLYDLLLAPFAEFDFMRYALVSVFCLSLSAAPVGVFLVMRRMS
                     LIGDALSHAVLPGAAVGYMFAGLSLPAMGLGGVAAGMLMALLAGLVSRFTTLKEDANF
                     AAFYLSSLAIGVVLVSKNGSSVDLLHLLFGSVLAVDIPALQLIAAVSTLTLLTLAVIY
                     RPLVLESIDPLFLKSVGGKGGLWHVLFLVLVVMNLVSGFQALGTLMSVGLMMLPAITA
                     RLWAKHMGALILLSVLTALLCGLSGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEG
                     GILTKWLKNHRHHTT"
     gene            15481..16395
                     /locus_tag="WJJ54_000651"
     CDS             15481..16395
                     /locus_tag="WJJ54_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HEZ7341543.1"
                     /translation="MKHLKLTLIAALLTTAATAAPLPVVTSFSILGDVAKQIGGERVS
                     IQSLVGANQDTHAYHMTSSDIKKIRSAKLVLLNGLGLEAADVQRAVKQSKVSYAEATK
                     GIQPLKAEEEGGHHHDHDHDHEGHHHDHGEFDPHVWNDPVLMSAYAQNVAEALIKADP
                     EGKVYYQQRLGNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYHIEFIA
                     PQGVSSEAEPSAKQVAAIIRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYS
                     DALGNAPADTYIGMYRHNIKALTNAMKQ"
BASE COUNT         4316 a         5293 c         3646 g         3317 t
ORIGIN      
        1 cgtctgaagc cgattcggtt ttcagacgac atcattattt gacctgacgc aaacagaaag
       61 ccttccgcgt gcttaaacac atctcttgta gtaaaatatc taaacagatt caactggaaa
      121 cggtcaggct tcttcacgcc attcccattt caaccgccgc ctgccagatt cagacggtat
      181 tcctacttga aaacaaggag cgttacaatg aaagcagcac gtttttacga taaaggcgac
      241 atccgcatcg aagacatccc cgaaccgacc gtcgcccccg gcactgtcgg catcaatgtc
      301 gcctggtgcg gcatctgcgg tactgacctg cacgaattca tggaaggccc gattttcatt
      361 ccgccttgcg gtcatccgca cccgatttcc ggcgagtccg cacccgtaac gatgggacac
      421 gagttctccg gcgtggtcta tgccgtcggc gaaggcgtgg acgacatcaa agtcggccaa
      481 cacgtcgtgg tcgaacccta catcatccgc gatgacgtac cgaccggaga aggcagcaac
      541 taccacctct ccaaagatat gaactttatc ggcttgggcg gctgcggtgg cggtctgtcc
      601 gaaaaaatcg ccgtcaaacg tcgttgggtg catccgattt ccgacaaaat cccgttggat
      661 caagccgctt tgatcgaacc gctgtctgtc ggacaccacg cctatgtacg cagcggcgcg
      721 aaagcaggcg acgtcgcatt ggtcggcggc gcaggtccga tcggtttgct gttggctgcc
      781 gtgttgaaag ccaaaggcat caaagtcatc atcaccgagt tgagtaaagc acgcaaagac
      841 aaagcgcgcg aatccggcgt tgccgactac atcctcgacc cgtccgaagt cgatgttgtc
      901 gaagaggtga aaaaactgac caacggcgaa ggcgtggacg tggcattcga atgtaccagc
      961 gtgaacaaag tgttggatac tttggtcgaa gcctgcaaac ctgccgccaa tttggttatc
     1021 gtatccatct ggagccaccc tgcaaccgtc aacgtccaca gcgtcgtgat gaaagagctg
     1081 gatgtgcgcg gcacgattgc ctactgtaac gaccacgccg aaaccatcaa actggtcgaa
     1141 gaaggcaaaa tcaacctcga acccttcatc acccagcgca tcaagctgga cgaactggtt
     1201 tccgaaggct tcgagcgtct gatccacaac aacgaatccg ccgttaaaat tattgtgagt
     1261 ccaaacctgt aagcaaatta catttgcaac agcacaaatg ccgtctgaaa cgctcagacg
     1321 gcattttcca acgaagcgca acaggcgtat tgcccgagag cagccgttta gcctatcatt
     1381 ccgaacaaac agaaacaaac agaaggaaaa tcatgggaga ttccgtacta tccgccatcc
     1441 aacaaaccat cacccagcga aaatctgcca atccgtccga atcttacgtc gcacagctct
     1501 tgcataaggg cgaagacaaa atcctaaaaa aagtgattga agaggcgggc gaagtgttga
     1561 tggcatccaa agacaaaaac ccgtcccacc tggtttacga agttgccgac ttatggtttc
     1621 acaccatgat tcttctgaca caccacgacc tgaaggcgga agacgtattg gacgaacttg
     1681 cgcgccgcca aggtttgtcg ggcttggccg aaaaagccgc tcgcacagaa tcttgaattt
     1741 atattaaaat ccgcactttc ccacattcaa tccgtctgac cgctgttcag acggcatcgg
     1801 agccgttatg gacaactgta ttttctgcaa aatcgccgcc aaagacattc cggcgcaaac
     1861 cgtctatgaa gacggcgaaa tggtttgttt caaagacatc aaccccgctg ctccggttca
     1921 tctgctgctg attcccaaag tccatttcga ttcgttggca cacgccgcgc ccgaacatca
     1981 gccccttttg ggaaaaatga tgctgaaagt tcccgaaatc gccaaagcgg caggactggc
     2041 agacggcttc aaaaccctga tcaacaccgg aaaaggcggc ggacaagagg tcttccacct
     2101 gcatatacac atcatgggca cacccgtata aaccgttatt tcacaatcaa cccctaatac
     2161 ttacttaagg atacatcatg ggcagttttt ctctgacgca ctggattatc gtactgatta
     2221 tcgtcgtttt gatattcggc accaaaaaac tgcgcaacgt cggcaaagac ctcggcggtg
     2281 cggttcatga cttcaaacag gggctgaacg aaggtacaga cggcaaagaa gcccaaaaag
     2341 acgatgtaat cgaacacaaa aaagacgaag acaaagcgta atttatgttt gatttcggtt
     2401 tgggcgagct ggtttttgtc ggcattatcg ccctgattgt cctcggcccc gaacgcctgc
     2461 ccgaggccgc ccgcaccgcc ggacggctca tcggcaggct gcaacgcttt gtcggcagcg
     2521 tcaaacagga atttgacact caaatcgaac tggaagaact gaggaaggca aagcaggaat
     2581 tcgaagctgc cgctgctcag gttcgagaca gcctcaaaga aaccggtacg gatatgcaga
     2641 acagtctgca cgatatttcc gacggtctga agccttggga aaaactgccc gaacagcgca
     2701 cgcctgctga tttcggtgtc gatgaaaacg gcaatccctt tcccgatgcg gcaaacaccc
     2761 tatcagacgg catttccgac gttatgccgt ccgaacgttc cgatacttcc gccgaaaccc
     2821 ttggggacag cgggcaaacc ggcagtacag ccgaacccgc ggaaaccgac caagaccgcg
     2881 catggcggga atacctgact gcttctgccg ccgcacccgt cgtacagacc gtcgaagtca
     2941 gctatatcga taccgctgtt gaaacccctg ttccgcacac cacttcgctg cgtaaacagg
     3001 caataagccg caaacgcgat ttgcgtccta aatcccgcgc caaacctaaa ttgcgcgtcc
     3061 gtaaatcata aagagggcaa tccggtgtcc gaaacacaaa acgaacaacc cgtccaaccg
     3121 cttgtcgaac acctcatcga gctgcgccgc cgcctgatgt ggacggttgt cggtatctta
     3181 gtctgctttt tcggcctaat gccgtttgcc caacaactct atacttttat cgccgacccg
     3241 ctgatggcaa acctgcccaa agacaccagc atgattgcca cagatgtcat cgcaccgttt
     3301 ttcgttccgg tcaaagttac cctgatggcg gcatttttaa tttcgctgcc gcatacgctc
     3361 taccaaatct gggcatttgt cgcccccgca ctctatcaaa acgaaaaacg cctgattacc
     3421 ccgcttgtcc tctcaagcgt cagcctgttt ttcatcggca tggcatttgc ctactttctg
     3481 gttttccccg tcattttcaa attccttgcc agcgttaccc ctgtcggtgt caatatggcg
     3541 acagacatcg acaaatacct atcttttatc ttaggcatgt ttgttgcgtt cggcacaacg
     3601 tttgaagttc ccatcgtcgt tatcctgtta accaaaatca gcgtggtaac aaccggacag
     3661 ctcaaacgcg cccgccccta tgtgattgtc ggcgcgtttg tcattgccgc catcatcacg
     3721 ccgcccgatg tgatttcaca aaccctgctt gccattccgc tgattctctt atacgaagca
     3781 ggtatttggt tcggacgctt tttcacgcca cgttcagaac aggatggcga catacagccg
     3841 cctgcaacaa cctgacacta tgccgtccga acctccgcct cataccgcaa cagattaagg
     3901 aatacctttg aataccctct atttaggttc aaacagcccg cgccgaatgg aaatcctgac
     3961 acagttgggc taccgcgtca tccaactgcc cgccggtatc gacgaatccg ttaaagccga
     4021 tgaaacacct gcctgttacg ttcaaagaat ggcggcagaa aaaaatcaga cggctttggc
     4081 cctgtttctc gaaaccaacg gcgcaatgcc tgactttccc ttgattacag cggatacctg
     4141 cgtcgtttca gacggcatca tattgggcaa accccgctcc caagctgaag caatcgaatt
     4201 tttaaaccga ttgtccggca aacaacatac cgtcctgact gctgtctgca ttcattatcg
     4261 cggcaaaacg tcaagccgcg tccaaaccaa ccgcgtcgtt ttcaagcccc tgagttcgga
     4321 agaaatttcc gcctatgtgc aaagcggcga accgatggac aaagccggcg cctacgccgt
     4381 acaaggcata ggcggcatct ttatccaatc tatcgaaggc agcttcagcg gcattatggg
     4441 actgcccgtt tatgaaaccg tttcgatgtt gcaggatttg ggataccgct cccccttgtc
     4501 cgcccttaaa ccgtaaagac cgccgtgaac agacaaaccg cttacctcct tacctctttc
     4561 agcctgatcg cactgataat cctgtccctt tcctgggaac tgtggattgc accgttgcgc
     4621 ccgggcggct cgtggctcgc gctcaaagcc ctccccctct gtctgccgct ttcaggcatc
     4681 ctgaagaaaa aaatctacac ctaccaatac agctccatgc tggttctgat ttactttgcc
     4741 gaagccgtca tgcgcctgtt cgacgcctat cccgcagaac agatttgcgc cgcgctttcc
     4801 gcagtattca gcatcatctt cttcatatcc tgcctgtcgt tcgtcaaaca atacaaggaa
     4861 acaaacaatg cccgctgaaa cgaccgtatc cggcgcgcac cccgccgcca aactgccgat
     4921 ttacatcctg ccctgcttcc tttggatagg catcgtcccc tttaccttcg cgctcaaact
     4981 gaaaccgtcg cccgactttt accacgatgc cgccgccgca gccggcctga ttgtcctgtt
     5041 gttcctcacg gcaggaaaaa agctgtttga tgtcaaaatc ccacctatca gcttccttct
     5101 gtttgcaatg gcggcgtttt ggtatcttca ggcacgcctg atgaacctga tttaccccgg
     5161 tatgaacgac atcgtctctt ggattttcat cttgctcgcc gtcagcgcgt gggcctgccg
     5221 gagcttggtc gcacacttcg gacaagaacg catcgtgacc ctgtttgcct ggtcgctgct
     5281 tatcggctcc ctgcttcaat cctgcatcgt cgtcatccag tttgccggct gggaagacac
     5341 ccccctgctt caaaacctca tcgtttacag cgggcaaggc gtaatcggac acatcgggca
     5401 gcgcaacaac ctcggacact acctgatgtg gggcatactc gccgccgcct acctcaacgg
     5461 acaacgaaaa atcccgcccg ccttgggcgc aatctgcctg attatgcaga ccgccgtttt
     5521 aggtttggtc aattcgcgca ccatcttgac ctacatagcc gccatcgccc tcatccttcc
     5581 cttctggtat ttccgttcgg acaaatccaa caggcggacg atgctcggca tagccgcagc
     5641 cgtattcctt accgcgctgt tccaattttc catgaacacc attctggaaa cctttaccgg
     5701 catccgctac gaaactgccg tcgaacgcgt tgccaacggc ggtttcacag acttgccgcg
     5761 ccaaatcgaa tggaataaag cccttgccgc cttccagtcc gccccgatat tcgggcacgg
     5821 ctggaacagt tttgcccaac aaaccttcct catcaatgcc gaacagcaca acatatacga
     5881 caacctcctc agcaacttgt tcacccattc ccacaacatc gtcctccaac tccttgcaga
     5941 gatgggaatc agcggcacgc ttctggttgc cgcaaccctg ctgacgggca ttgccgggct
     6001 gcttaaacgc cccctgaccc ccgcatcgct tttcctaatc tgcacgcttg ccgtcagtat
     6061 gtgccacagt atgctcgaat atcctttgtg gtatgtctat ttcctcatcc ctttcggact
     6121 gatgctcttc ctgtcccccg cagaggcttc agacggcatc gccttcaaaa aagccgccaa
     6181 tctcggcata ctgaccgcct ccgccgccat attcgcagga ttgctgcact tggactggac
     6241 atacacccgg ctggttaacg ccttttcccc cgccactgac gacagtgcca aaaccctcaa
     6301 ccggaaaatc aacgagttgc gctatatttc cgcaaacagt ccgatgctgt ccttttatgc
     6361 cgacttctcc ctcgtaaact tcgccctgcc ggaatacccc gaaacccaga cttgggcgga
     6421 agaagcaacc ctcaaatcac taaaataccg cccccactcc gccacctacc gcatcgccct
     6481 ctacctgatg cggcaaggca aagttgcaga agcaaaacaa tggatgcggg cgacacagtc
     6541 ctattacccc tacctgatgc cccgatacgc cgacgaaatc cgcaaactgc ccgtatgggc
     6601 accgctgcta cccgaactgc tcaaagactg caaagccttc gccgccgcgc ccggtcatcc
     6661 ggaagcaaaa ccctgcaaat gacccgcgcc ggcggatgcg gataccgccc gaaatgtaaa
     6721 gctccatgca agacattgca aaaaacagca aaccggtagg gaaatacgct atcaaaaaac
     6781 attgcagccg tgttaagata aaccgtcaaa caatcttttc acgccccgcc cgaaacaggg
     6841 tcggggcata cccttacgaa aaggaaacac catgagccgc gtattactcg tagatgacga
     6901 tgccctgcta accgaactgc tgaccgaata cctgagcgcc gaaggtctga acgtccgcag
     6961 cgttcccgac ggggaagcag gcgtacagga aatcctgagc gggcagtacg atgtagtcgt
     7021 attggattcc atgatgccca aaatgaacgg cttggatgtc ttgaaaaacg tacgcgcccg
     7081 aagcaccgtc cccatcatca tgctgaccgc caaaggcgac gacatcgacc gaatcatcgg
     7141 cttggaaatg ggcgcggacg actatgtccc caaaccctgc acaccacgcg aactcttggc
     7201 acgcatcaat gccatcctgc gccgcgcaca acacagcggc gaacagaaca acgcacccaa
     7261 cagcatctcc gtcagcgatg tcgtcctgta tcccgccaaa cgccaggcat ccgtcaaaga
     7321 catgccgctc gaactgacca gcaccgaatt caacctgctc gaagtcctga tgcgccatgc
     7381 cggacaggta gtcagcaaag aaaccctgtc cgtcgaagca ctcgaccgca agctggcaaa
     7441 attcgaccgc agtatcgacg tacacatctc cagcatccgc cacaagttgg gcgatgcctc
     7501 tctgattcaa accgtacgcg gcttgggcta cctgtttgtc aaaaactgaa ataaacagat
     7561 aaatgaaact gttccaacgc atcttcgcca cattttgcgc ggttatcgtc tgtgcaatct
     7621 ttgtggcgag tttttctttc tggctggtgc agaacaccct tgccgaaaac cagttcaacc
     7681 aacgccgcac catcgaaacc actttgatgg gcagcatcat ttccgcattc cgggcacgcg
     7741 gggacgcggg cgcgcgcgaa atcctgacgg aatggaaaga cagccccgtc tcatcgggcg
     7801 tgtacgttat acagggcgac gagaaaaaag atatcctgaa ccggtatatc gacagctaca
     7861 ccatcgaacg cgcccggctt ttcgccgccg gacacccgca ttccaacctc gtccatatcg
     7921 aatacgaccg cttcggcgaa gaatacctgt tcttcaccaa agactgggac aaactccaag
     7981 cccgccgcct gcccagcccc ctgttgatcc ccggcctgcc gctcgccccg atttggcacg
     8041 aactcatcat attgtccttc atcatcgtcg tcggactgct gatggcgtac atcctcgccg
     8101 gcaacattgc caaacccatc agaatcttag gcaacggcat ggacagggtg gcaaacggag
     8161 aacttgaaac ccgtatctcc caacaggtcg acgaccgcga cgacgaattg tcccatcttg
     8221 ccatccaatt cgacaaaatg gtggaaaaac tcgaaaaact cgttgccaaa gaacgccacc
     8281 tgctccatca cgtctcccat gaaatgcgtt ctccccttgc gcgcatgcag gcaattgtcg
     8341 gactgattca ggcgcagccc caaaaacagg agcaatatct caaacggctg gaaggcgaac
     8401 tgacccgcat ggatacgctg gccggggaac tgttaaccct gtcccgtctc gaaacttcca
     8461 atatggcttt ggaaaaagaa agcctgaaac tcctgccctt cctgggcaac ctggtagaag
     8521 acaatcaaag cattgcccag aaaaacggac aaacggttac cctgtctgcc gacggaaaaa
     8581 tccccgaaaa cacaaccatc cttgccaacg aaagctacct gtaccgcgcc ttcgacaacg
     8641 tcatccgcaa cgccgtcaac tacagtcccg aaggcagcac catcctgatc aacatcggac
     8701 aagaccacaa acactggata atcgacgtta ccgacaacgg ccccggcgtg gacgaaatgc
     8761 agctcccgca catcttcacc gctttctacc gtgcagactc cagtgccaac aaacccggaa
     8821 caggactggg gcttgcattg acccaacata ttattgaaca gcactgcggc aaaatcatcg
     8881 ccgaaaacat caaaccgaac gggctgcgga tgcgcttcat cctacccaag aaaaaaaccg
     8941 gttccaaaac agaaaaaagt gcgaactgac cataatgccg tctgaaccgg cttcagacgg
     9001 cattgcacaa acagttaccc caaaacaaac acacagcggg tgcatctcca aaaatcacgc
     9061 acataccgtc cgcaaaggaa tatatcatgt cggcacaaac cgatcccggc tacttcttca
     9121 tgcccaacca cattatcctg ataggcgcga gcgaacgtcc gtacagcctg ggcgaacgcg
     9181 tactcagcaa cctgctgagt acgccctttc aaggaaaaat cacccccgta aacccgcgcc
     9241 accacaccat agccgggctt cccgcctaca ccagcctcaa caaaatcccc ggcaatgcag
     9301 acctgattat tgccgttacc ctacccgaca gttacgacac cctcttcaaa acctgccgca
     9361 aaaagcagct ccgacacatc atcctcatac aggactggga cagcctgtct gccgcagaac
     9421 tgcacaccgc cgaaactgcc atccgcaaac accacggcaa cggactcaac atcaccgcct
     9481 gcaccaccgc aggcatccaa ctgccctcac tcggacttaa catcagtacc caagacggat
     9541 acgccgcagg ccataccgcc atactgaccg gcaatgccgc cgtcagccgc caaatcgaca
     9601 acatcctgaa caaactccgt caaggcacat cccgccacat cagcctgcat cccggcatca
     9661 gccccatcac atccgccgat tggctcaacc gcttcggaca cagcctgcac accaaaaccg
     9721 ccgtcctaca ccacaaccct gaagaggatc agcgcaaact gttcagcgca atccgccaat
     9781 ttacccgcca tacgccgctg attctccaca tcacctgccg cacgacagaa accgaccgtg
     9841 ccgtactgca ctgcctcgcc cgacactgca acttcctcat cagtttcaac gccgacgacc
     9901 tcgaagccgc actgcgcgcc caactgtccg accttccacc cctgtcccga ctcgacatcc
     9961 tgtccgacac gcctgccgaa tggctgaacg cgcacgcgcc aaaaaccctc gccctccact
    10021 ttcccaacct tccccaccac atccgcaacg gacacctgac cggcacaccc acaccctcaa
    10081 tctgccacga catcgcctca cgtcagcttg cccgccccga cacccaagcc gtcctgacca
    10141 tcctcagccc ctccggacac gaggattaca aaaaaacagc acgcgccctt atccgcctgt
    10201 ccgaacagac cgccaaaccc ctgctcgtca gcagcccctt ttcagacggc ataacacatt
    10261 tcgacacccc cactcaggca atccgcaccc tttcctaccg caacaccgcc gccgccctga
    10321 aacaggcaca gctcgacatt gcaccgccgc aaccgtgccg tctgaaaaca ccgcaacccc
    10381 aaaacatcaa aaaagccctc gaagccgccg accccgccct aatcgccgaa gccctgcacc
    10441 tcccccccta ccggcacacc acccataacg ccgtccaatt ccaattcggc agccactccc
    10501 tctatggcga catcctgacc gcacgttgca acggacaaac cactgccgta ctcccgccgt
    10561 ttaccacgct cgacagccgc caccttgccc gctttgccga actcgacggc acacaaaccc
    10621 tcgaccagtt cctgcacaca ctgaccatca ttcccgaata ccgccaacac attctcggca
    10681 tcaccctcaa cctaaacggc ggacaataca gcagcgattt catcttaaag acacccgaaa
    10741 cacacgacac gcccaaacgc aagaacacag gcaaagccgc ccaaaccctc gaacatgccg
    10801 ccgcaaaaat gcagagtgcc gccgcatacc tgaaacacaa aaacccgaca gccgccgaat
    10861 ttctccgcca cacaagcgaa gccgccgcag aactgctcgg cagcaaaacc gaaaccggag
    10921 cagccgtacc caacgtactt gccccctatc ccgcagcaca cctcaaaaca ctgtccctaa
    10981 gaaacaacac gaccgttacc attaccccca ttttgcccga agacgcagaa gccaaacagc
    11041 agttcgtccg cagcctcggt cccgaagcac ggtacacacg cttcatgacc cacaccaacg
    11101 aactgcccgc agccacgttg gcacgcctgt gcaaccccga ttaccactgt gaagccgcat
    11161 ggacggcaaa ggatgccgac agcaacatcg tcgccgtcgt ccgccacagc cgcctgaacc
    11221 gcaacgaatg cgaatttggc atcacactgg cggaacatat gcgcggcagc ggactggcac
    11281 agaaaatgat ggaactcatc atccaaaccg ccgcacagca aggctaccgg actatgagtg
    11341 ccgacattct caaaaccaat acccccatga tcaaacttgc tgaaaaatca ggatttaccc
    11401 tcaaggaatc ggacaccgaa aaaaacctgt accgcgcata tctgaacctt gcggcagaca
    11461 aaacaacaga aaaaacaaat aaaaacttgc gcaccgacca caaaataacc taaaatcggc
    11521 agtttccata tatccgattt tctcaaaagg actcaaaatg gtagttatcc gtttggcacg
    11581 cggcggctcg aaacaccgcc ccttctacaa cgtcatcgtt actgactcac gcagccgccg
    11641 cgacggccgc ttcatcgaac gcgtaggctt ctacaacccc gtagccaacg aaaaacaaga
    11701 gcgcgtccgc ctcaatgcag accgcctgaa ccactggatt gcacaaggcg cgcaagtcag
    11761 cgactccgtt gcaaaactga ttaaagaaca aaaagccgcc taattcacat ttgccgccat
    11821 gacagacact caaaaccggg tagccatggg ctacatcaaa ggcgtattcg gcataaaagg
    11881 ctggttgaaa attgccgcca acaccgaata ttccgacagc cttttggact accccgagtg
    11941 gcatttggtc aaggacggca aaaccgtcag cgttaccctt gaagccggaa aagtcgtcaa
    12001 cagcgaactc caagtcaaat tcgaaggcat aaacgaccgc gacttggcat tctcattgcg
    12061 cggttacacc atcgaaatac cccgtgaagc attcgccccg acagaagaag acgaatacta
    12121 ctggacagac ttggtcggca tgaccgtcgt caacaaagac cataccgttt taggcaaggt
    12181 aagcaacctg atggaaaccg gcgcaaacga cgtattgatg attgacggag aacacgggca
    12241 gattctgatt ccgttcgttt cccaatatat cgaaaccgtc gataccggca gcaagattat
    12301 tactgccgac tggggtttgg actactgatg cttatccagg cagttaccat tttccccgaa
    12361 atgttcgaca gcattacccg ctacggcgta acgggacgcg cgaacagaca gggaatctgg
    12421 cagtttgaag cagtcaatcc ccgaaagttt gccgacaaca gattgggcta catcgacgac
    12481 cgcccgttcg gcggcggccc gggaatgatt atgatggctc cgccgcttca tgcagcaata
    12541 gaacacgcca aagcacaatc ctcccaagct gcaaaagtca tctacctcag cccccaaggg
    12601 aaaccgctga cacaccaaaa agcggtagaa ctggcagaac ttccgcatct gattctgctg
    12661 tgcggacggt atgagggcat agacgaaagg cttctgcaaa gcagcgtcga tgaagaaatc
    12721 agcatcggag acttcgttgt ttccggcgga gagcttcccg ccatgatgct gatggatgcg
    12781 gtattgaggc tcgtacccgg cgtattgggc gatatgcagt ctgccgaaca agattcgttc
    12841 tcaagcggca ttttggactg cccccactac accaaaccct tagaatttca aggcatggct
    12901 gttccggaag tattacgttc cggcaatcat ggcttgatag cggaatggcg gttggaacaa
    12961 tcgctgcgcc gcaccttgga gcgcagaccc gatcttttgg aaaagcgcag tttaatccca
    13021 aaggaatccc gcatcttgaa taaaatccta caagagcaac gggaaatcca atcataattt
    13081 aggaaaaaaa caatgaacct gattcaacag ctcgagcaag aagaaattgc ccgcctgaac
    13141 aaagaaatcc ccgaattcgc accgggcgac accgtagtcg tatccgtacg cgtcgtggaa
    13201 ggtacccgca gccgtctgca agcctacgaa ggcgttgtca ttgcacgccg caaccgtggt
    13261 ctgaacagca acttcatcgt ccgtaaaatt tccagcggcg aaggtgttga acgtactttc
    13321 caactgtact ctccgaccgt cgaaaaaatc gaagtcaaac gccgtggcga cgtacgccgt
    13381 gccaaactgt actacctgcg cggtctgacc ggcaaagctg cacgcatcaa agaaaaactg
    13441 cctgcacgca aaggttgatt caaacccgtt ttccccaatg ccgtctgaac cttctgacgg
    13501 catttcttat tgccgcaaca tccgcaacgg aacagcacca agaagcacac cccttccggc
    13561 acatcccgaa tccccgtccg aaccgaacaa aatttacaga ccaaacgtta tacagtatca
    13621 tatcagccat ataataataa ccgctttacc gctttccctt tcaaaaccgc aaatcatcat
    13681 gacaccttcc cttttactat caggattgac cttccgcctc gtccttgccc tgattgccgt
    13741 atccctttta tggggcgttt acttttgggc agtatccgca tgagcatcat tgtcgaaaac
    13801 ctgaccgtca gctaccgccg ccgccccgcc gtgcaccatg tggacattac ttttgaagaa
    13861 catagtatgt gggcggtttt cggtcccaac ggcgcaggga aatctacctt tcttaaatcc
    13921 ttgatgggat tgcagcccat cgacactggc agcatccggc tggacggatt gacccgtcag
    13981 aacattgcct accttcccca gcagtccgac atcgaccgct cgcagcccat gaccgttttc
    14041 gacttggcgg caatggggct gtggtatgaa atcggctttt tcaaagggat aaataccgct
    14101 caaaaacaac gcgttcacga agccttggag cgtgtaggaa tgcggcagtt tgcccgccgc
    14161 caaatcgccc acctctcaaa cggacaattc caacgcgtcc tttttgcccg aatgctggtt
    14221 caaaacgcca aattcctact tctagacgaa cctttcaacg ctgttgatgc acggacaacc
    14281 tacgaacttc tcgacgtatt gcagaaatgc cattgcggcg gacacgctat cattgccgtt
    14341 ttgcacgatt acgaacaagt ccgtgcctac tttcccaata ccctgctgct cgcccgagaa
    14401 aaaattgcgg caggcgcaac cgagaccatt ctgacagaac cctacctcgc ccaagccaac
    14461 gccaaaatgc agcaacagga aagccccgag tggtgcgcgt cataaatgcc gtctgaaacc
    14521 gaaaaaccat gaacctctac gacctgctcc ttgccccctt tgcagaattt gactttatgc
    14581 gctacgccct cgtatccgtc ttctgcctgt ccctcagtgc cgcacccgtc ggcgtattcc
    14641 tcgtcatgcg ccgtatgagc ctgataggcg acgcattgag ccacgctgtc ctgcccggtg
    14701 ccgccgtcgg ctacatgttt gccggcttga gcctgcccgc catgggtttg ggcggcgtag
    14761 ccgcaggcat gctgatggca ctgcttgccg gacttgttag ccgcttcacc accctgaaag
    14821 aagatgccaa ctttgccgcc ttttatctca gcagcctcgc cataggcgta gtcctcgtca
    14881 gcaaaaacgg cagcagtgtc gatctgctgc atctgctttt cggctctgta cttgccgtcg
    14941 atattcctgc cctgcagctc atcgccgccg tatccaccct cacactgctt acccttgccg
    15001 tcatctaccg cccgctcgta ctcgaaagca tcgaccccct gtttctcaaa tctgtcggcg
    15061 gcaaaggcgg gctttggcac gtcctctttc tcgtcctggt cgtcatgaac ctcgtatccg
    15121 gctttcaagc cctcggcaca ctcatgtccg tcggactcat gatgctgcca gccattaccg
    15181 cccgcctgtg ggcgaagcac atgggcgcac tcatcctcct atccgttctg acagccctgc
    15241 tgtgcggctt gagcgggctg ctcatttcct accacatcga aatcccttcc ggccccgcca
    15301 tcatcctctg ttgcagcgtc ctttatctct tttccgtcat actcggcaaa gaaggcggca
    15361 ttctgaccaa atggctcaaa aaccaccgcc accacaccac ctgaccccgc aagccgcttg
    15421 aacaaacagg cagcttgttt taccataaca gatgttacgt tatatcacag gagaacagtt
    15481 atgaaacacc tcaaactcac ccttattgcc gcattgctaa ccaccgccgc aactgccgcc
    15541 cccctgcccg tcgtaaccag cttcagcatt ttaggcgacg ttgccaagca aatcggcgga
    15601 gagcgcgtat ccatacaaag tttggtcgga gccaaccaag atactcatgc ctatcacatg
    15661 accagtagcg acattaaaaa aatccgcagt gcaaaactcg tcctgctcaa cggcttagga
    15721 cttgaagctg ccgatgtaca acgtgccgtc aaacagagca aagtatccta tgccgaagcg
    15781 accaaaggca tccaacccct caaagccgaa gaagaaggcg gacaccatca tgaccacgac
    15841 catgaccacg aaggacacca ccatgaccac ggcgaatttg acccgcacgt ctggaacgac
    15901 cccgtcctta tgtccgccta tgcccaaaac gtcgccgaag ccctgataaa ggccgacccc
    15961 gaaggcaaag tttattatca acaacgcttg ggcaactacc aaatgcagct taaaaaactg
    16021 cacagcgacg cacaagccgc atttaacgcc gtccctgccg ccaaacgcaa agtcctgacc
    16081 gggcacgatg ccttttccta catgggcaaa cgttaccata tcgaattcat cgccccgcaa
    16141 ggcgtgagca gcgaagccga gccctcagcc aaacaagtcg ccgccatcat ccgacaaatc
    16201 aaacgcgaag gcatcaaagc cgtctttacc gaaaacatca aggacacccg tatggttgac
    16261 cgtatcgcca aagaaaccgg tgtcaacgtc agcggcaaac tgtattccga cgcactcggc
    16321 aacgcgcccg cagacaccta catcggaatg taccgccaca acatcaaagc cttgaccaac
    16381 gcgatgaagc aataaaaccg tttgattggt ttgaatttga aaaggcaaaa ggccgtctga
    16441 aaattatagt ggattaacaa aaatcaggac aaggcgacga agccgcagac agtacagata
    16501 gtacggtaag gcgaggcaac gctgtactgg tttttgtgta tccactatat tgctagaagt
    16561 gcaccgatta ag
//
LOCUS       DAWKJW010000026        16518 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.026, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000026 DAWKJW010000000
VERSION     DAWKJW010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16518)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16518)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16518
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.026"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            16..306
                     /locus_tag="WJJ54_000652"
     CDS             16..306
                     /locus_tag="WJJ54_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S ferredoxin-like protein"
                     /protein_id="HEZ7341544.1"
                     /translation="MARIGTNKGFFELLEGETLLEGLERTGHMVEYQCRSGYCGSCRV
                     KILEGSVTYREPPLAFLGRDEILPCCCCVEGDVRLDCGLSGEDEGLSDSLLK"
     gene            complement(347..625)
                     /gene="ftsB"
                     /locus_tag="WJJ54_000653"
     CDS             complement(347..625)
                     /gene="ftsB"
                     /locus_tag="WJJ54_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HEZ7341545.1"
                     /translation="MKWVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAVQEEKNQ
                     TLALRNHSLAAEVYDLENGQEAISEIARVELGYIQDGETFYRLIRHNR"
     gene            complement(639..1925)
                     /gene="eno"
                     /locus_tag="WJJ54_000654"
     CDS             complement(639..1925)
                     /gene="eno"
                     /locus_tag="WJJ54_000654"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEZ7341546.1"
                     /translation="MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTG
                     QKEALELRDGDKSRYLGKGVLKAVDHVNNQIAQALIGIDASEQSYIDQIMIELDGTEN
                     KGNLGANATLAVSMAVARAAAEDTGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSL
                     NIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEA
                     LQLMVEATEVAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLESLV
                     NEFPIISIEDGMDENDWEGWKLLTEKLGGKVQLVGDDLFVTNPKILAEGIEKGVANAL
                     LVKVNQIGTLSETLKAVDLAKRNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSL
                     SRSDRMAKYNQLLRIEEELAEAADYPGKAAFYQLGK"
     gene            complement(1971..2411)
                     /locus_tag="WJJ54_000655"
     CDS             complement(1971..2411)
                     /locus_tag="WJJ54_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HEZ7341547.1"
                     /translation="MMQTFRKISRYAATLWLGMQIMAGYIAAPVLFKMLPKMQAGEIA
                     GILFDILSWSGLAVWGAVLAAAFAALTRRQTALLLFLLSALAANQFLVTPVIEALKYG
                     HENWLLSFVGGSFGMWHGISSIVFMATALLSAVLSWRLSGKEAV"
     gene            complement(2426..3268)
                     /gene="kdsA"
                     /locus_tag="WJJ54_000656"
     CDS             complement(2426..3268)
                     /gene="kdsA"
                     /locus_tag="WJJ54_000656"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEZ7341548.1"
                     /translation="MDIKINDITIGNNSPFVLFGGINVLEDLDSTLQTCAHYVEVTRK
                     LSIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPYQCQPV
                     AEVCDVIQLPAFLARQTDLVAAMAETGNVINIKKPQFLSPSQMKNIVEKFREAGNGKL
                     ILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASSGRRAQA
                     LDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKALDDLIKSQPI
                     LTIE"
     gene            complement(3290..3673)
                     /locus_tag="WJJ54_000657"
     CDS             complement(3290..3673)
                     /locus_tag="WJJ54_000657"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HEZ7341549.1"
                     /translation="MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKV
                     AIVNNNNGERFETYTISGKRGSGVICLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHE
                     PKVVLVDGNNKIRDIISYEPPHTVL"
     gene            complement(3822..7520)
                     /gene="mfd"
                     /locus_tag="WJJ54_000658"
     CDS             complement(3822..7520)
                     /gene="mfd"
                     /locus_tag="WJJ54_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEZ7341550.1"
                     /translation="MTYPIPKPREKSRWPNLSQGSLPLALARYLPHKRLKVVLTQDAE
                     QALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLF
                     VPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKSDLVDAGYNHVSHVVAAGEFAVR
                     GGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTDTQRTISPVSEIRLLPAHEFPTDSEA
                     QKIFRSRFREEVDGNPNDAAVYKAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDAL
                     FVSLGDVHAEANRFWSDVKSRYAMAQGDETYPPLLPQHLYLSADVFAGRLKNYGQVLP
                     DVSGKEHTLPDLAVNRQSDEPLQALKDFQTTFDGRILLCAESLGRRETMLGFLQQNGL
                     KAKPVSDWQGFLSAHEPLMITVAPLAYGFKLGGLQSPNQQQTTSASEGEGDAVTDQTE
                     FSASATNPLPSPLPQEREQSAAVVSDSLKAAAVSTESSLPPGKSNLHGQIQQQPAPSP
                     VGEGWGEGKAVAAQSAIAVITESDLYQYVARSRVHNRRKKHAAVSDGLLRDLAEINIR
                     DPVVHEEHGIGRYMGLVTIDLGGETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHE
                     NIALHKLGSGAWNKAKRKAAEKARDTAAELLNLYAQRAAQSGHKFEINELDYQAFADG
                     FGYEETEDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAV
                     LAPTTLLVEQHAQNFADRFADFPVKVASLSRFNNSKATKAALEGMADGTVDIVIGTHK
                     LVQDDIKFKNLGLVIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGL
                     RDFSLITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRER
                     LETLLPEARIGVAHGQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIIN
                     RADKFGLAQLHQLRGRVGRSHHQAYAYLLTPEYITKDAEKRLDAIAAADELGAGFTLA
                     MQDLEIRGAGEILGEGQSGEMIQVGFTLYTEMLKQAVRDLKKGRQPDLDAPLGITTEI
                     KLHSPALLPESYCPDIHERLVLYKRLAVCETVQQINAIHEELVDRFGLPEQPVKTLIE
                     SHHLRLMAKELGINAIDAAGEAVTVTFGKNNNIDPTEIILLIQNDKKYRLAGADKLRF
                     TAEMENIEVRINTVKNVLKTLQNRCLPK"
     gene            7705..9132
                     /locus_tag="WJJ54_000659"
     CDS             7705..9132
                     /locus_tag="WJJ54_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HEZ7341551.1"
                     /translation="MIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMRYLPEDK
                     WLALKQAGLLLPFLDKRHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQ
                     EFGDEAQIAQGLDMVFKGEGGGLGVTEPETSGAAIAREMQSYYEYTDGQTIYVNAAKY
                     WQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRCETLASEGLRAVRYAVNRIDA
                     EMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILENLERYVRNDIRFV
                     DYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQK
                     LLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGMKLDKN
                     QTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQ
                     AEHEDTAAFLLNDIRKDILDCRYCG"
     gene            9281..10372
                     /gene="mltB"
                     /locus_tag="WJJ54_000660"
     CDS             9281..10372
                     /gene="mltB"
                     /locus_tag="WJJ54_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HEZ7341552.1"
                     /translation="MKKRKILPLAICLAALSACTAMEARPPRVNEAQAPRADEMKKES
                     RPAFDAAAVPVSDSGFAANANVRRFVDDEVGKGDFSRAEWQDFFDKAAYKADIVKIMH
                     RPSTSRPWYVFRTGNSGKAKFRGARRFYAENRALIDDVAQKYGVPAELIVAVIGIETN
                     YGKNTGSFRVADALATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGSYAGAMG
                     MPQFMPSSYRKWAVDYDGDGHRDIWGNIGDVAASVANYMKQHGWRTGGKILVSATLAP
                     GADVQAIIGEKTALTRTVADLKAYGIIPGEELADDEKAVLFKLETAPGVFEYYLGLNN
                     FYTVWQYNHSRMYVTAVRDIANSLGGPGL"
     gene            complement(10495..12501)
                     /locus_tag="WJJ54_000661"
     CDS             complement(10495..12501)
                     /locus_tag="WJJ54_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific recombinase"
                     /protein_id="HEZ7341553.1"
                     /translation="MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCA
                     GERFDLIIDTFKQDRELLSRFSRCFYIWLAQVHIYPALIKLGIFSRHSFAREMGIRIY
                     ERFSPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSHAEPSKLQTAG
                     IRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSSFVALQRETAKLVEHYRNS
                     TAPYDTAHLEVMFDQCFSQIDYLRRKGTGAGSGSSVKVAHLLERLRQTVDRLKLLTDI
                     QTGAGNSNRLTIALMNSLIYAAVEQYSTRHLRRSSIRMLARSITENKSHHGEHYITRN
                     RKEYFKMFYSAAGGGVIIALMALLKIRIGTLGLSPFLTSLSAGFNYGIGFMIIHMLHC
                     TVATKQPAMTAASFAEQVDLNEGGKAVDNKLAKLLIDVCRSQSVAVFGNVSIAILLAC
                     AISFGYAHLYRQPILDAHTAAYQFKSIDIIAYPTLWYAAIAGLWLFCSGIIAGFFDNR
                     ADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLVGNFIFGMLLGMTGYFGHL
                     LGLPLDIRHVAFSSANLGYAAVSGNVGLGTFVLGIFSVLAIGLVNLCVSFSLALFVAL
                     RSRGTKIGSIRNLIKSFWNQIKSNPCILFLPPAKEQGHPPSDKP"
     gene            12790..14817
                     /locus_tag="WJJ54_000662"
     CDS             12790..14817
                     /locus_tag="WJJ54_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HEZ7341554.1"
                     /translation="MSLSEFIERRTSFNPMVILTTLFFVCVLVVLVLTVPNQVQMWLD
                     RAKEVIFTEFSWFYVLTFSIFLGFLLILSVSSLGNIRLGRDEDVPEFGFLSWLAMLFA
                     AGMGVGLMFFGVAEPLMHYFSDITAGTPEHRQQQALLHTVFHWGVHAWSVYGTIALAL
                     AYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDIMALLATFFGIITTLGFGASQLGA
                     GLQEMGWIAENSFSVQVLIIAAVMSLAVVSAISGVGKGVKVLSELNLSLAFLLLFFVL
                     AAGPTVYLLSAFGDNIGNYLGNLVRLSFKTYAYEREHKPWFESWTVLYWAWWCSWAPF
                     VGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAIWLNDGVAGGMLEKMTSS
                     PETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNNITSRDKGLSAPRWQA
                     VMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSLWKGLSADKKYFET
                     RVNPTSVFWTGGKWKERLVQIMSQTQEQDILKFLKHTASPAMHELQRELSEEYGLSVR
                     VDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIRHQTTYKPYA
                     YFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE"
     gene            complement(14909..16462)
                     /locus_tag="WJJ54_000663"
     CDS             complement(14909..16462)
                     /locus_tag="WJJ54_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HEZ7341555.1"
                     /translation="MNRTYANFYEMLTAACRKNGNGTAVFDGKEKTAYRALKQEAEAV
                     AAYLQNIGVKFGDTVALAVSNSTEFITAYFAVSAIGAVAVPMNTFLKNSEYAYILNDC
                     KARFLFASAGLSKELAGLKAQTPVEKIIWTGQSRPDGEMAEGDAFFEDVRRFPEKPDL
                     GRQPRINDLAHIIYTSGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMF
                     HSFTLTAMVLLPIYMACSIILVKSVFPFSNVLKQALLKRATVFLGIPAIYTAMSKAKI
                     PWYFRWFNRIRLFISGGAPLAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQ
                     KARSVGIPLPGLEAKAVDEELVEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGW
                     LKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEEIYKLDAVEAAAVIGVKDR
                     YADEEIVAFVQLKEGMDLGENEIRRHLRTVLANFKIPKQIHFKDGLPRNATGKVLKRV
                     LKEQFDGNK"
BASE COUNT         3486 a         4089 c         4897 g         4046 t
ORIGIN      
        1 tttgattggt cggaaatggc gcgcattggt acgaataagg gtttttttga gctcttggag
       61 ggcgagaccc tgttggaagg cttggaacgg acggggcata tggtggaata tcagtgccga
      121 agcggatatt gcggatcgtg ccgagtgaag attttggagg gaagcgttac ttatcgggag
      181 ccgcctttgg cttttttggg gcgggacgag atactgccgt gctgctgttg cgtcgagggg
      241 gatgtcaggc tggattgcgg tttgtcgggg gaggatgagg ggctgtctga cagtttgttg
      301 aaataaaagc cgtccgaaca ttggttcgga cggctttttg acggtattac cggttatgcc
      361 tgatgagtcg gtaaaaggtt tcaccgtctt ggatataacc cagttctacc cgggcgattt
      421 ccgaaatggc ttcttgaccg ttttccaaat catagacttc ggcggcaagg gaatgattgc
      481 gtagggcgag tgtctggttt ttttcttctt gaacggcaat ctgttctctc agactgctgt
      541 tgcgtccgat gctgcctttg ccgaaccaga ggctgtattg gcaacagaca agtgcgaagg
      601 ataaaacgac agttacccac ttcatacctt aacctttttt atttgcccag ttggtagaat
      661 gcggctttgc cggggtagtc ggcggcttcc gccaattctt cctcgatacg cagcagttgg
      721 ttgtatttcg ccatgcggtc ggaacggctc aaagaaccgg ttttgatctg catacagttg
      781 gtggcgactg ccaagtcggc aatggtgctg tcttcggttt cgccggagcg gtggctcatc
      841 acgctggcgt agcggttgcg ttttgccaga tcgacggctt tcagggtttc actcaaagta
      901 ccgatttggt tgactttgac caatagtgcg tttgccacgc ctttttcaat gccttcggca
      961 aggattttcg ggttggtaac gaagaggtcg tcgccaacga gttggacttt gccgcccagt
     1021 ttttcggtca gcagtttcca gccttcccag tcgttttcat ccatcccgtc ttcgatggag
     1081 atgatgggga actcgttgac cagactttcc agatattcgg caaattccgc gttggtgtag
     1141 gagcggcctt cggcttccaa gtggtatttg ccgtctttgt agaactcgct ggacgcgcag
     1201 tccaatgcga ataatacgtc ttcgcccgct ttgtagccgg cgacttcggt ggcttcaacc
     1261 atcagttgca gggcttcttt gtggctgttc aggttggggg cgaaaccgcc ttcgtcgccg
     1321 actgtggtcg ggaagccttt gctgtcgcac agttttttca aggcgtggaa aatttccgca
     1381 ccgcagcgca acgcttcgcg gaaagatttt gcgccgacgg gcataatcat aaactcttgg
     1441 atgttcaggc tgttgttggc gtgttcgccg ccgttgatga cgttcatcat cggtacgggc
     1501 agggacatcg gacctgcgcc gcccaagtag cggtaaagcg gcagccctgt atcttcagcg
     1561 gctgcgcgtg ctacggccat agaaacggcc aaagtcgcgt tggcacccaa gttacctttg
     1621 ttttcagtac cgtccaattc gatcatgatt tggtcgatat aagattgttc gctggcatcg
     1681 ataccgatga gggcttgcgc gatttggttg ttgacgtggt caacggcttt caatacgcct
     1741 ttgcccaagt aacgggattt gtcgccgtcg cgaagttcta aagcctcttt ttgaccggtg
     1801 gacgcgccgc tcggtacggc tgcgcgtccc attacgccgg attcgagcaa tacatcacac
     1861 tcgactgtgg ggttgccgcg tgagtccaaa atttcgcggg cgaaaatatc aacgattgcg
     1921 ctcatgaatg ttctccaagt gaagtgaagg gaggtaaaaa tgggagggct tcagacggcc
     1981 tctttgccgg aaagccgcca acttaaaact gctgaaagta gggcggttgc cataaaaaca
     2041 atactggaaa tgccgtgcca cattccgaag gatccgccta caaacgacaa cagccaattc
     2101 tcatgcccgt atttcagcgc ctcgataacg ggggtaacca aaaattggtt ggcggcaagg
     2161 gcggacaata aaaaaagcag tagggcggtt tgccgccggg ttagggcggc aaaggcggca
     2221 gccagtaccg cgccccaaac ggcaagcccg ctccaagaga ggatgtcgaa caatatgccg
     2281 gcaatttcgc ccgcctgcat tttgggcagc attttgaaca gcaccggtgc ggcgatataa
     2341 cccgccataa tctgcatacc gagccacaag gttgcggcat accggctgat ttttcggaaa
     2401 gtctgcatca taaggcgaaa ccgtgttatt cgattgttaa aatcggttgt gatttgatta
     2461 aatcgtccaa tgctttgatg cggattaaaa aatcttctaa aaggtgcagc ggcagcgcgc
     2521 tggggccgtc gcattttgcc agtttcggat cggggtgcga ttcgaggaac aggccggcaa
     2581 ggcgggttgc catgcctgca agtgccaaat ccaaagcctg tgcgcgacga ccgctggatg
     2641 cggcagaacc ggcatcgcgg gtttgcaggg agtgggtaac gtcgaaaata accggcaggt
     2701 tgccgcaagt ctgtttcatc acgccgaaac cgagcatatc gacaacgagg ttgtcgtagc
     2761 cgaagctgct gccgcgttcg cataaaatca gtttcccgtt gccggcttcg cggaattttt
     2821 ccacaatgtt tttcatttga gaggggctga ggaattgtgg ttttttgatg ttgatgacat
     2881 tgcccgtttc cgccattgcg gccaccaaat cggtctgccg cgcaagaaag gcgggaagct
     2941 ggatgacatc gcacacttcg gcaacgggtt ggcactgata gggttcgtgt acgtcggtaa
     3001 tgacggggat gccgaactct gctttgactt tttcaaaaat ctttaagcct tcttccaagc
     3061 ctacgccgcg ataggaatgg atggacgagc ggtttgcctt gtcgaaagag gctttaaaga
     3121 tatagggaat actgagtttt cgggtaactt cgacgtaatg cgcgcaggtc tggagggtgg
     3181 aatccaaatc ttctaaaacg ttgatgccgc cgaataggac gaagggcgag ttgttgccga
     3241 tggtgatgtc gttgatttta atatccataa tcaatgtccg ttttcagggt tacagtacgg
     3301 tgtgcggcgg ctcgtaggag atgatatcgc ggattttgtt gtttccgtct accaagacga
     3361 ctttgggctc gtgtgcggcg atttcgggtt cggagagttg gacgtaagac atgatgatga
     3421 cgatatcgcc tttctgcacc agccttgccg cagcaccgtt cagacaaatc acgccgctgc
     3481 cgcgtttgcc tgaaatggta taggtttcaa aacgttcgcc gttgttgttg ttgacgatgg
     3541 cgactttttc gttgggatag atgcctgccg cgtccaacag gtcttgatcg acggtaatgc
     3601 tgccgacgta gttcaaatcg gcttcggtta cggtggcgcg gtggattttt ccgccaagca
     3661 tagtacggaa catgtatttc cttttggttt gtgtgcggtc tgacgggcgc gatgccgtct
     3721 gaaaatctga atgccgtatt atagtggagt ttccttcaaa ttcataatgg cggctttcgg
     3781 acaaggaaaa cggtgtttca gacagcattg cggtgtcggc tttatttggg caggcatctg
     3841 ttttgcaagg tttttaaaac gttttttacg gtgttgattc tgacctcgat attttccatc
     3901 tctgcggtaa accgcagctt atcggcgccg gcaaggcggt attttttgtc gttctgaatc
     3961 agcaggatga tttcggttgg atcaatattg ttgtttttgc caaaggttac cgttaccgct
     4021 tcgccggccg catcaatggc attgataccc aattcttttg ccataagccg taagtggtgg
     4081 ctttcgatga gggttttgac gggttgttcg ggcagtccga agcggtcgac gagttcttcg
     4141 tgtatggcgt tgatttgttg cacggtttcg cagacggcga ggcgtttgta gaggacgagc
     4201 cgttcgtgga tgtcggggca gtagctttcg ggcagtaggg cggggctgtg cagtttgatt
     4261 tcggtggtga tgcccagcgg cgcgtcgagg tcgggttggc ggcctttttt gagatcgcgc
     4321 acggcttgtt tgagcatttc ggtgtagagc gtgaagccga cctgtatcat ttcgccggat
     4381 tgtccttcgc cgaggatttc gcctgcgccg cggatttcca aatcctgcat ggcgagggtg
     4441 aaacctgcgc cgagttcgtc tgctgccgcg atggcgtcga ggcgtttttc tgcgtctttg
     4501 gtgatgtatt cgggcgtgag caggtaggcg taggcttggt ggtggctgcg gccgacgcgc
     4561 ccgcgaagct ggtgcagttg cgccaatccg aatttgtcgg cgcggttgat gatgatggtg
     4621 ttggcgttgg ggatgtcgat gccggtttcg atgatggtag agcagagcaa cacgttgaat
     4681 ctttgctgca aaaagtcgcg catcacttgt tccagctcgc gctcgcgcag ttgtccgtgc
     4741 gccacgccga tgcgggcttc gggcaacagg gtttccagcc gctcgcgcat attctcaatc
     4801 gtatctactt cattgtgcag gaaaaatacc tgcccgccgc gtttgagttc gcgcaacacg
     4861 gcttcgcgca cgctgccttc gctgaacggt ttgacaaagg ttttgacggc gaggcggcgg
     4921 ctgggcgcgg tggtaatcag cgagaagtcg cgcagacctt cgagtgccat gctgagggtg
     4981 cgcggaatcg gtgtggcggt catggtgagg atatcaacat tggcgcgcag gcgtttgagc
     5041 tgctctttct gacgcacgcc gaagcggtgt tcttcgtcga taatcactaa acctaagttt
     5101 ttgaatttga tgtcgtcctg caccagtttg tgcgtaccga taacaatatc gaccgtgccg
     5161 tctgccatgc cttccagcgc ggctttggtg gctttgctgt tgttgaaacg cgaaaggctg
     5221 gcgactttca cggggaaatc ggcgaaacgg tcggcgaagt tttgcgcgtg ctgctcgacc
     5281 aaaagcgtgg tcggggcgag tacggcaact tgtttgccac ccattaccgc cacaaacgcg
     5341 gcgcgcaggg cgacttcggt tttgccgaaa ccgacatcgc cgcacacgag gcggtccatc
     5401 ggcttcgcct gcgtcaaatc tttaatcacg gcggcgatgg cggctgcctg gtcttcggtt
     5461 tcttcgtagc cgaagccgtc ggcaaacgcc tgataatcca actcgttgat ttcaaacttg
     5521 tgtcccgatt gggcggcgcg ttgggcatag agattgagca actcggcggc ggtatcgcgc
     5581 gctttttcgg cagccttgcg ttttgccttg ttccacgcgc cgctgccgag cttgtgcagg
     5641 gcaatgtttt catgcgcctg accggagtag cggctgatta aatgcagttg cgaaacaggc
     5701 acataaagct gcgcttcgcc tgcatattcg agcaacatca tttcgttggt ttcgccgccc
     5761 aaatctatcg ttaccaagcc catataccgc ccgatgccgt gttcttcgtg aacgacgggg
     5821 tcgcggatgt tgatttcggc aaggtcgcgc aacagaccgt ctgaaacggc ggcgtgtttc
     5881 ttgcggcggt tgtggacgcg cgaacgggcg acgtattggt agagatcgga ttcggtgatg
     5941 acggcgatgg cactttgagc ggcaactgct ttgccctctc cccaaccctc ccccacgggg
     6001 gagggggcag gttgctgttg gatttgcccg tgcagattac ttttaccggg gggcaggctg
     6061 ctttcggttg aaacggcggc tgctttcaga ctgtctgaaa cgacggctgc actttgttcc
     6121 ctctcctgtg ggagagggct agggagaggg tttgttgcgg atgcggaaaa ttcggtttgg
     6181 tcggtaaccg catcgccttc tccttcggag gcggaagtag tttgctgttg gttcggcgat
     6241 tgcagtccgc ccagtttaaa cccgtaagcc aacggcgcca ctgtaatcat cagcggctca
     6301 tgcgccgaca agaagccctg ccagtcggac acaggtttgg ctttcaaacc gttttgctgc
     6361 aagaaaccga gcatggtttc gcgccgtccc aagctttcgg cgcacagcaa aatccgcccg
     6421 tcaaaggtcg tctgaaaatc cttcaatgcc tgcaacggct cgtcggattg gcggttgacg
     6481 gcaaggtcag gcagggtgtg ttccttgccg gaaacatcgg gcagcacttg tccgtagttt
     6541 ttcagacggc ctgcaaaaac atcagcagag agatacaaat gctgtggaag caaaggcgga
     6601 taggtttcgt cgccctgcgc catcgcgtaa cgggatttga catcgctcca aaagcggttt
     6661 gcctcggcgt gaacatcgcc caaagagaca aacagcgcgt cttcgccgat atagtcaaac
     6721 agcgtttcca gctcgttttc aaaaaacagc ggcagataat attccacgcc cgcaccgaag
     6781 tggccgttgc ttactgcttt gtacacagcc gcatcgttcg gattaccatc gacttcctcg
     6841 cggaagcggc tgcggaagat tttttgcgcc tcgctgtcgg tggggaattc gtgcgccggc
     6901 agcaggcgga tttcggaaac gggggagatg gtgcgctgcg tgtccgtatc aaaggttttg
     6961 atgctgtcga tttcatcgtc aaacaaatcg atgcggtagg gcatttcgct gcccatgggg
     7021 aacaaatcga caatgccgcc gcgcacagcg aactcgcctg ccgcaacaac gtgggaaaca
     7081 tggttataac ctgcatccac caaatcgctt ttcagacggc ctatatccaa agtctgtcct
     7141 gttttcagcc aaaacgtgcg ccccgccaaa aacggcacgg gcggcagctt ctgcatcgcc
     7201 gtggcaaccg gcacaaacaa cacgtccgcc gcgccgctct taatctgcca caacgccgag
     7261 agccgctccg acaccaaatc ctgatgcgga gaaaaacgct cgtaaggcag cgtttcccag
     7321 tccggcaaga acaccgccgt gtcgtgcgga cggaaaaacc gccatgccgt ctgaaggcgc
     7381 aacgcctgtt ccgcatcttg ggtcagcacg accttgagcc gcttgtgcgg cagataacgc
     7441 gccaaagcca agggcagcga gccttgcgaa agattgggcc aacgggattt ttcacggggt
     7501 ttggggatgg ggtaggtcat agtgcggcaa tcggcggaca gtgatgcaaa cggtcatttt
     7561 agcacgggag ggtgcgcgat gccgtctgaa aagccggcgg attgttgccc ggcgcacttt
     7621 gtggtaaagt ttagaaaatc aactctaaac tgtggcaggc ggtttgaccg gccgccgatt
     7681 aatgggaacc gacagaggaa gccgatgata cacaccgaac cgagcgcgca gccgtcaact
     7741 atggacacgg ctgctttttt aaagcacatc gaatccgcat tccgccgcat tttttcagac
     7801 ggtatcgacc tgatgcgata cctgcccgaa gacaaatggc ttgccttgaa gcaggcgggt
     7861 ttgctgttgc ccttcctcga caaaagacac ggcggccgca agggcagcca gtttgaaatt
     7921 caggaagtat tgcggattgc ggggcattac ggcgtacccg ttacgctgcg taccggcatc
     7981 gaaggcgcgc tggtgttgca gccactgcaa gagttcggcg atgaagcgca aatcgcacag
     8041 ggtttggaca tggttttcaa aggcgagggc ggcggtttgg gcgttaccga acccgaaacc
     8101 tccggcgcgg cgattgcccg agaaatgcag tcttactacg aatataccga cggacaaacc
     8161 atttacgtca acgccgcaaa atactggcag ggcaactcgc aaagcgactt cctcctcgtt
     8221 gccgccaaag aacgcaaaaa cggcaaactc gccaaagtca tcgacctgct gctcgtcccc
     8281 aaaacataca tccgctgcga aaccctcgca tccgaaggct tgcgcgccgt ccgttacgcc
     8341 gtcaaccgca tcgatgccga aatgcctgca accgccgtga tgaaactctc ccagagcgac
     8401 gccgcaggtt tgcgcgcgtt ccaaaacatc tttatccgca gccgcctgca actgatcggc
     8461 atgacgcacg gcattatgga atacatcctt gaaaacctgg aacgatacgt ccgcaacgac
     8521 atcagattcg tcgattacga acgccgcgaa atccggcgcc gccatcaggt ttccgagatt
     8581 ctttaccgct acgtctgcca ttccgtttcg cccgttgcac ccgtcgccca tcagctgatg
     8641 gaggcgaaca tcgtcaaaac cctcgccacg gaatacactt acgccgccgc gcaaatgttg
     8701 caaaaacttt tgggcgcgaa gggttttgaa cgcggacaca ccgccggcaa tatcgctatc
     8761 gacatccgcc ccttcacgat ttttgaaggc ccgaacgata tgctttatgc cgaaatttac
     8821 gaccagttcg tccgcgccac cgccgaagaa aaagaagcag gcatgaagtt ggacaaaaac
     8881 caaaccctgc tcgaccgcct gcaaaccgat gcccgctttg ccgccgtcgc ccgcgactac
     8941 actttgcccg aagacatccg cagcttcctg caggaacaca ccctgaccga cgcctgcgcc
     9001 ctgcaaaaag tcttcatcgg caaaatcatc gcccgactct ttgtcttcgt acaggcggaa
     9061 cacgaagaca ccgcagcctt cctgctgaac gacatccgca aagatatatt ggactgccga
     9121 tattgcggat agcgggcaaa tacggcggca tacggatttc aggcggtgca aaaggcaacg
     9181 cgcggtattc cacaaagccg ccgattgcgg cggatgccgc atttcgcacc gcgccccttg
     9241 cgccgctttc ccacttaccc tatttgttcg gaacatattt atgaaaaaga gaaaaatact
     9301 gccgctggca atttgtttgg cggctttgtc tgcctgtacg gcgatggagg cacgcccgcc
     9361 ccgggtaaat gaagcccaag ccccccgcgc ggatgaaatg aaaaaagaaa gccgccccgc
     9421 gtttgacgcg gcagccgtac cggtatccga cagcgggttt gccgccaatg caaatgtccg
     9481 ccgttttgtg gacgatgaag tcgggaaagg ggatttttcc cgggcggaat ggcaggattt
     9541 ttttgacaaa gcggcttaca aggcggacat cgtcaagatt atgcaccgac cctccacatc
     9601 gcgtccgtgg tatgtgttcc gcacgggaaa ttcgggcaag gcgaaatttc gcggcgcgcg
     9661 ccggttttat gcggaaaacc gcgcgcttat cgatgatgtg gcgcaaaaat acggcgtgcc
     9721 tgccgaactt atcgtggcgg ttatcgggat tgaaacgaat tacggcaaaa atacgggcag
     9781 tttccgtgtg gcggacgcat tggcgacctt aggctttgat tacccccgcc gcgccgggtt
     9841 tttccaaaaa gaattggtcg agcttttaaa gctggcaaaa gaagaaggcg gcgatgtttt
     9901 cgcctttaaa ggcagctatg cgggcgcaat ggggatgccg caatttatgc cttcgagcta
     9961 ccggaaatgg gcggtggatt atgacgggga cggacatcgg gacatatggg gcaacatcgg
    10021 cgatgtcgcg gcatcggttg ccaattatat gaagcagcac ggttggcgca cgggcgggaa
    10081 aatactggtg tctgcaacat tggcgccggg tgcggatgtt caggcaatca ttggcgaaaa
    10141 aaccgccctg acgcggacgg tggcggattt gaaggcgtac ggcatcatcc ccggcgaaga
    10201 gcttgccgat gatgaaaagg cggttttgtt caaactggaa accgcacccg gcgtgtttga
    10261 atattatttg ggcttgaaca atttttatac ggtatggcag tacaatcaca gtcggatgta
    10321 tgtaacggcg gtcagggaca ttgccaattc gcttggcggc ccgggattgt aatgtttttt
    10381 aaaatgccgt ctgaaccacg tttcgattca gacggcattt ttgcatcctt ttatggggat
    10441 ttcccgcatc agggcggtat tcggggcgaa tcccgcttca gacggcattg ccggtcaagg
    10501 cttgtccgaa ggaggatgtc cctgttcttt ggcgggcggg aggaaaagta tgcagggatt
    10561 gcttttaatc tgattccaaa aacttttaat cagattgcgg atgctgccga ttttcgtgcc
    10621 gcgcgagcgc agggcgacga agagggcgag gctgaaactg acgcagaggt tgaccaggcc
    10681 gatggcgagg acgctgaaaa tgccgagtac gaacgtgccc aaaccgacgt tgccgctgac
    10741 ggcggcatag ccgaggttgg cggaggaaaa ggcgacgtgg cggatgtcca gcggcagccc
    10801 gaggaggtgt ccgaaatagc cggtcatacc caagagcatc ccgaagatga agttgcctac
    10861 caacgagccg tagtgtttgt ggatgtaggc ggcgaggacg cggcggggcc cggggcgcat
    10921 gattttacgc agcaaggggt tgaaaggcag gcgttggcgc aggttgaggt agtcggcgcg
    10981 gttgtcgaaa aaacctgcga tgatgccgga gcagaacagc cacagacctg caatggcggc
    11041 ataccacagc gtcgggtaag cgatgatgtc tatggatttg aactggtagg cggcggtgtg
    11101 ggcatcgagt atgggctgcc ggtacagatg ggcatagccg aacgatatgg cgcacgccaa
    11161 aaggatggcg atggaaacgt tgccgaagac ggcgacgctt tgggagcggc atacgtcgat
    11221 gaggagcttg gcgagtttgt tgtccaccgc tttgccgcct tcgttgagat cgacctgttc
    11281 ggcaaagctg gcggcagtca tcgcgggctg cttggtggcg acggtgcagt gcagcatatg
    11341 gatgatcata aagccgatgc cgtagttgaa cccggccgac aaggaagtga ggaaggggct
    11401 gaggccgagt gtgccgatgc ggattttgag cagcgccatc agggcgatga tgacgccgcc
    11461 gcctgccgcc gagtagaaca ttttgaaata ttctttgcgg ttgcgggtga tgtagtgttc
    11521 gccgtggtgg cttttgtttt cggtaatgct gcgggcgagc atacggatgc tgctgcggcg
    11581 caggtggcgg gtgctgtatt gttcgaccgc cgcgtagatg agggagttca tcagcgcgat
    11641 ggtcaggcgg ttgctgttgc cggcgccggt ttggatgtcg gtgagcagct tcagacggtc
    11701 tacggtctgc cggagccgtt cgagcaggtg ggcgactttg accgacgaac cggagccggc
    11761 gcccgtccct ttgcggcgca aatagtcaat ctggctgaaa cattggtcga acatcacctc
    11821 gaggtgggcg gtgtcgtaag gcgcagtgct gttgcggtag tgttcgacca gtttggcggt
    11881 ttcgcgctgg agggcgacga aggaagaatc ggcttccagc aggcgcgggg cgatgcggat
    11941 gaggtcgggt tcgatggctt cggatgccgt ccagacagac agcatttcga tggcgcgcaa
    12001 acgcgcatcg gcaaggcgga tgcccgccgt ctgcaatttg gacggttcgg cgtggcttcg
    12061 gatgagttcg tataaaacca gccattggcg gatattgagc gtttgcagcc atttgtcgtc
    12121 gttttcggaa tggaaaagat aaaggaagac ttcgcccaag ttggcaaaat ctttatatga
    12181 cgggctgaag cgttcgtata tgcgtatgcc catttcccgg gcaaagctgt ggcgcgagaa
    12241 gatgccgagt ttgatgagtg ccggataaat gtgcacctgc gcgagccaga tgtaaaaaca
    12301 ccggctgaag cgggacagta attccctgtc ttgtttgaat gtgtcgataa tcaggtcgaa
    12361 acgttccccc gcacattttt tgccgccacg gcgcaaaaat ttaatcagtg cgttgaggac
    12421 gttgacaaaa tcggtatgtc ccaagctttc cgaaagcagg gggcgcaggt tttgaggggt
    12481 aattttcttc atatcagcca ttgtaccgca tcggcaatcc agcgttaaac gccccgatgg
    12541 cggggagggc gcgcctgcgg aaggcggcgc attttccgct agtttgaaat caaactatat
    12601 taatgatata ataaatatcg ataaatcaat ctgatagaat aatccgtatt gatttttaat
    12661 tttttcgatt ataacaattt cggccggttt gtgcatttcg tcatccggaa gccggtattt
    12721 taccggcagg ttttgaccgc tttgcccgat gaccgggttt gtctgttttt aacaaaggag
    12781 tgagaaggtt tgtccctgtc tgaatttata gaacgccgaa cgtcatttaa tccgatggtt
    12841 attttgacga ctttgttttt tgtgtgtgtt ttggtggtat tggttttaac cgtgccgaat
    12901 caggtgcaga tgtggctcga tcgggcaaaa gaagtcattt ttaccgagtt cagctggttt
    12961 tatgttttaa cgttttccat ttttctgggt ttcctgctga tactctcggt cagcagtttg
    13021 ggaaacatca ggctcggacg ggatgaagat gtgccggaat tcggcttcct gtcgtggctg
    13081 gcgatgctgt ttgcggccgg gatgggcgtg ggtctgatgt ttttcggcgt ggcagagccg
    13141 ttgatgcatt atttttcgga cattacggcc ggcacgccgg aacacaggca gcagcaggca
    13201 ttgctgcaca cggtgttcca ttggggcgtt cacgcttggt cggtgtacgg tacgattgca
    13261 ttggctttgg cttatttcgg tttccgctac aagctgccgc ttgccctgcg ttcttgtttt
    13321 tatcccctgt tgaaagaaaa aatttccgga aggttcggcg atgccattga tattatggcg
    13381 ttgcttgcta cttttttcgg catcatcacc acattggggt tcggggcttc gcaactgggc
    13441 gccggattgc aggaaatggg ctggattgcc gaaaacagct tcagcgtgca ggttttgatt
    13501 atcgccgccg tcatgtccct cgccgtcgtt tcggcaatat ccggcgtggg gaagggcgtg
    13561 aaggtgttga gcgagttgaa cctgagcctt gcgtttttgc tgctgttttt tgttttggcg
    13621 gcgggtccca ctgtttacct gttgtcggca ttcggcgaca acatagggaa ctacctcgga
    13681 aatctggtgc gcctcagttt taaaacttat gcgtacgaac gggaacacaa gccgtggttt
    13741 gaatcttgga cggtgcttta ttgggcgtgg tggtgttctt gggcgccgtt tgtgggtttg
    13801 tttatcgcgc gcatttcaaa ggggcgcacc atccgcgagt ttgtcttcgg ggttttgctc
    13861 atccccggcc tgttcggcgt tttgtggttt accgtcttcg gcaatacggc gatttggctg
    13921 aatgacgggg ttgcgggggg aatgctcgaa aagatgacct cctctccgga aacgctgctt
    13981 tttaaattct ttaattacct ccccctgccc gaattgacga gcatcgtcag cctgctggtc
    14041 atttctctgt tttttgtaac ttctgccgat tccgggattt atgtcctgaa caatattacc
    14101 tctcgggaca aaggcttgag cgcgccacgg tggcaggcgg ttatgtgggg cgtgctgatg
    14161 tctgccgttg ccgttttgct gatgcgctcg ggcggactcg gcaacctgca gtctatgacc
    14221 ctgattgttt ccctgccgtt tgccctgctg atgctgataa tgtgtttcag cctgtggaaa
    14281 ggcttgagtg cggataagaa atattttgag acccgggtta accctaccag tgtattttgg
    14341 acgggcggca agtggaaaga acggctggtg cagataatga gccagacgca ggagcaggat
    14401 attttaaaat tcctcaaaca taccgcatcg cccgctatgc acgagttgca acgggagctt
    14461 tcggaagaat acggcttgag cgtccgggtc gataagatgt ttcatcagga cgagcccgca
    14521 atcgagttcg tcattcggaa agagacgatg cgcgatttta tgtacgggat taagtctgtc
    14581 gggcaggatg tatccgacca gttgattaac gacggcaagc tgccgcatat ccggcatcag
    14641 acaacttaca aaccctacgc ttattttttc gacgggcgcg tcgggtacga tgtgcagtat
    14701 atgaacaagg acgagctgat tgccgacatt ttgaaaaact acgaacgtta tttgatgttg
    14761 ttggatgatg tcggtcagga actgatggcg cacgagcagg tggaattggc agagtaagtg
    14821 ccttatctct ggcgtttgcc aaaaaaaatg cggtgaatca gattcaccgc attttttttg
    14881 ccggacgggg cttcggacgg cacggcgttc atttgtttcc gtcaaactgc tccttcaaca
    14941 cccgtttcaa taccttgccc gtagcgttgc gcggcagccc gtctttaaag tggatttgtt
    15001 tggggatttt gaaatttgcc agcacggtac gcaggtggcg gcggatttcg ttctcgccca
    15061 aatccatacc ttccttcaat tggacgaagg cgacgatttc ctcgtcggca taacggtctt
    15121 tcacgccgat gacggcggcg gcttcgacgg catcgagttt gtagatttct tcttcgattt
    15181 cgcgcggata gacgttttga cctttggaaa taatcaaatc ttttttgcgg tcgacgataa
    15241 agataaagcc gtcttcgtct atggtaacga aatcgcccgt tttcaaccag ccgttgacga
    15301 tggtttcatc ggtggcggca ggcatattga ggtagccccg catcaccgaa ccgcccctga
    15361 cgatcagttc gcccacttcg ccgcgcggca cttcgaccaa ttcttcatcg acggctttgg
    15421 cttccaaacc gggcaggggg atgccgacgc tgcgggcttt ttgcctctcg ggcgtattga
    15481 cggcgacgac gggagaggct tcgctcagtc cgtagccttc cagcaatttg gcgcgaggga
    15541 acttggcttt gaaatcgagg atggtttgtt ccgccaaagg cgcaccgccg ctgataaaca
    15601 ggcgaatgcg gttgaaccat ctgaaatacc aagggatttt cgccttgctc attgcggtgt
    15661 aaatcgcggg tatgcccaaa aacacggtcg cgcgtttgag cagggcctgt ttcaaaacgt
    15721 tggaaaacgg aaaaacggat ttgaccaaaa taatcgaaca cgccatataa atcggcagca
    15781 gcaccatagc cgtcagcgtg aagctgtgga acatcggcag gaaaacgata aagcggtcgc
    15841 gtttggagat tttaaagatg cgttcgatgc cgttcaggtt ggcgaacagg ttggcgtagc
    15901 tgattagcgc acctttggga tgccccgtcg tgccggaggt gtagatgatg tgtgccaaat
    15961 catttatccg gggttggcgg cccaagtcgg gtttttcggg gaagcggcgc acgtcttcaa
    16021 aaaaggcatc gccttccgcc atttcgccgt ccggacggct ttggcccgtc caaatgattt
    16081 tttcgacggg cgtttgcgcc ttcaagcccg ccaattcttt tgacaggccg gccgaggcga
    16141 acaggaagcg cgccttgcag tcgttcagga tatacgcgta ttcgctgttt ttcaaaaatg
    16201 tgttcatcgg tacggcaacc gcgccgatgg cggatacggc gaaataggcg gtaataaatt
    16261 ccgtggaatt ggaaaccgcc agcgcgaccg tgtcgccgaa cttcacgccg atattttgca
    16321 gatacgccgc aacggcttcg gcttcctgct tgagcgcgcg gtaggcggtt ttttccttgc
    16381 cgtcgaacac tgccgtgccg ttgccgtttt tgcggcaggc ggcggtcagc atttcgtaga
    16441 aattggcata agtccggttc atgaaacttc ctttatggtt gcggacggag aacgccctca
    16501 tttgaaaaca atatgccg
//
LOCUS       DAWKJW010000027        16485 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.027, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000027 DAWKJW010000000
VERSION     DAWKJW010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16485
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.027"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            229..5595
                     /gene="iga"
                     /locus_tag="WJJ54_000664"
     CDS             229..5595
                     /gene="iga"
                     /locus_tag="WJJ54_000664"
                     /EC_number="3.4.21.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgA-specific serine endopeptidase
                     autotransporter"
                     /protein_id="HEZ7341556.1"
                     /translation="MKTKRFKINAISLSIFLAYALTPYSEAALVRDDVDYQIFRDFAE
                     NKGKFFVGATDLSVKNKQGQNIGNALSNVPMIDFSVADVNKRIATVVDPQYAVSVKHA
                     KAEVHTFYYGQYNGHNDVADKENEYRVVEQNNYEPHKAWGASNLGRLEDYNMARFNKF
                     VTEVAPIAPTDAGGGLDTYKDKNRFSSFVRVGAGRQLVYEKGAYHQEGKEKGYDLRDL
                     SQAYRYAIAGTPYKDINIDQTMNTEGLIGFGNHNTHYSAEELKQALSQDALTNYGVLG
                     DSGSPLFAFDKQKNQWVFLGTYDYWAGYGKKSWQEWNIYKKEFADEIKQRDNAGTIKG
                     NREHHWKTTGTNSHIGSTAVRLAGNERGANNGQNVTFENNGTLVLDQNINQGAGGLFF
                     KGDYTVKGANNDITWLGAGIDVADGKKVVWQVKNPKGDKLAKIGKGTLEVNGTGVNQG
                     ELKVGDGTVILNQQADADKKVQAFSQVGIVSGRGTLVLNSSNQINPDNLYFGFRGGRL
                     DANGNDLTFEHIRNVDEGARIVNHNTGHASTITLTGKSLITDPKTISIHYIQNNDDDD
                     DGYYYYRPRKPIPQGKDLYFKNYRYYALKSGGSVNAPMPENGQTENNDWILMGSTQEE
                     AKKNAMNHKNNQRISGFSGFFGEENGKGHNGALNLNFNGKSAQNRFLLTGGANLNGKI
                     SVTQGNVLLSGRPTPHARDFVNKSSARKDAHFSKNNEVVFEDDWINRTFKATEIAVNQ
                     SASFSSGRNVSNITANITATDNAKVNLGYKNGDEVCVRSDYTGYVTCNTDNLSDKALN
                     SFGATQINGNVNLSQNAALVLGKAALWGQIQGQGNSSVSLNQHSKWHLTGDSQVHNLS
                     LADSHIHLNNASDAQSANKYHTLKINHLSGNGHFHYLTHLAKNLGDKVLVKESASGHY
                     QLHVQDKTGEPNQEGLNLFDASSVQDRSHLSVSLANNHVDLGALRYTIKTENGITRLY
                     NPYAENRRRVKPAPSPATNTASQAQKATQTDGAQIAKPQNIVVAPPSPQANQAEEAKR
                     QQAKAEQVKRQQAEAERKSAKLAKQKAEAEREARELATRQKAEQERSSAELARRHEKE
                     REAAELSAKQKVEAEREAQALAVRRKAEAEEAKRQAAELARRHEKEREAAELSAKQRV
                     GEEERRQTAQSQPQRRKRRAAPQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARR
                     QQEERKAAELLAKQRAEAEREAQALAARRKAEAEEAKRQAAELAHRQEAERKAAELSA
                     NQKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAELAKQRAAAEAAK
                     RQQEARQTAELARRQEAERQAAELSAKQKAETDREAAESAKRKAEEEEHRQAAQSQPQ
                     RRKRRAAPQDYMAASQNRPKRRGRRSTLPAPPSPSFDSSAYAAPRALHNPDWYENDYA
                     EIPFDALEDEDVSESVDTSDKQPQDNTELHEKVETVSLQPRAAQPRAQAATQPQAQAA
                     AQADAVSTNTNSALSDAMASTQSILLDTGASLTRHIAQKSRADAEKNSVWMSNIGYGR
                     DYASAQYRRFSSKRTQTQIGIDRSLSENMQIGGVLTYSDSQHTFDQASGKNTFVQANL
                     YGKYYLNDAWYVAGDIGAGSLRSRLQTQQKANFNRTSIQTGLTLGNTLKINQFEIVPS
                     AGIRYSRLSSADYKLGNDSVKVSSMSVKTLTAGLDFAYRFKVGNLTVKPLLSAAYFAN
                     YGKGGVNVGGNSFAYKADNQQQYSAGAALLYRNVTLNVNGSITKGKQLEKQKSGQIKI
                     QIRF"
     gene            complement(5773..6975)
                     /gene="trpB"
                     /locus_tag="WJJ54_000665"
     CDS             complement(5773..6975)
                     /gene="trpB"
                     /locus_tag="WJJ54_000665"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEZ7341557.1"
                     /translation="MKNYHAPDEKGVFGEHGGLYVSETLIPALQELADAYKAAKNDPS
                     FWEEFHRDLKHYVGRPSPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALL
                     AKRMGKKRVIAETGAGQHGVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGAN
                     VVGVDSGSRTLKDAMNEAMREWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAK
                     EQMLEAIGRQPDVAVACVGGGSNAIGLFHPYIGEENVRLVGVEAGGLGVNTPDHAAPI
                     TSGAPIGVLHGFRSYLMQDENGQVLGTHSVSAGLDYPGIGPEHSHLHDIKRVEYTAAK
                     DEEALEAFDLLCKYEGIIPALESSHAVAWAVKNAPKMGKDQVILVNLSGRGDKDINTV
                     AKLKGIKL"
     gene            complement(7160..7849)
                     /locus_tag="WJJ54_000666"
     CDS             complement(7160..7849)
                     /locus_tag="WJJ54_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA glycosylase"
                     /protein_id="HEZ7341558.1"
                     /translation="MLFEGLPCLAVWCKNRLSAVLPVGGLNVSENLLEIETHPFDSVL
                     PPKAAVMMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFNDAAHFQRLSEKAFDAE
                     KIKAFLHERGIASCPTVLKAVRQHGNASDKFLKVVETVDLAAVLAQMPECRHICTTGG
                     KATEILLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLPSTSRAYPLSLAKKAAAYRAF
                     FEMAGLCEKQL"
     gene            8061..8840
                     /gene="rsmA"
                     /locus_tag="WJJ54_000667"
     CDS             8061..8840
                     /gene="rsmA"
                     /locus_tag="WJJ54_000667"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEZ7341559.1"
                     /translation="MKEHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLA
                     AITEPLAKKLNRLHVVEIDRDIVCRLKTLPFADKLVIHEGDVLQFDFNGIAGKKKIVG
                     NLPYNISTPLLFKLAEVADDVVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDM
                     EMLIDVPPESFDPAPKVDSAVVRMIPVKHRIGRADDFEYFAKLVKLAFHQRRKTIRNN
                     LKKLAGDDDLQAVGINPQDRAEHIAPEKYVALSNYLAGKAV"
     gene            9013..9741
                     /locus_tag="WJJ54_000668"
     CDS             9013..9741
                     /locus_tag="WJJ54_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEZ7341560.1"
                     /translation="MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLI
                     RTVNQLESIESGEIWVDGINVADPKTDLNKIREEVGFVFQSFNLYPHLTVLENITLAP
                     MKVKGQNAEQAEKKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLF
                     DEPTSALDPEMVGEVLKVMKDLAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDE
                     TPEAFFTNPKHERAKQFLQQVMTH"
     gene            9814..10173
                     /locus_tag="WJJ54_000669"
     CDS             9814..10173
                     /locus_tag="WJJ54_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341561.1"
                     /translation="MYFVDRTAVVLKPTVRFLEWLKSTDENMPDLTIEQLRANCSVFL
                     VPQFDEPEAVVSYFDERYRQIFEAELAGWDINKDKWPQDMGLKAFWEFFDIEIHDMVL
                     DMEEAELNITPVFDNMM"
     gene            10178..10624
                     /locus_tag="WJJ54_000670"
     CDS             10178..10624
                     /locus_tag="WJJ54_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator FolI"
                     /protein_id="HEZ7341562.1"
                     /translation="MRAFQTALRPSRILNILTVSLHSASLAVCLTWFYGRMMWFGLAA
                     LAASYAYSLRITNLKHRHAITAITIDRDGQAEIVSGKEKTAKAAALSGSSMVTPYALF
                     LQWDTGGKTVRQCIIPDMTDPESYRRLKVWVLWRQPKKTAETDTPS"
     gene            10656..11930
                     /gene="folC"
                     /locus_tag="WJJ54_000671"
     CDS             10656..11930
                     /gene="folC"
                     /locus_tag="WJJ54_000671"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEZ7341563.1"
                     /translation="MKTLQDWLSHLETAHSGGLIDMGLERVSEVKKRMKLTPQCPVVV
                     VAGTNGKGSVCAYLTQIYKQAGYKTGTLTSPHLLRYNERIAINAEPVSDDTIIASFER
                     IEAARGEISLTYFEFNTLAAVDIFMREQVDVMILEVGLGGRLDAVNAFDGDCAVVTSV
                     DLDHQAFLGDTVEQVGFEKAGVFRSGKPAICGQNPAPASLLSHAEAIGAKLLMVQRDF
                     EFHALENIQWNYRFRPQHSDSPARNRNSLPFPALRGAYQLSNAACALTVLECLNDKLP
                     VDIGAIKRGLLLVENPGRFQVLPGRPLTVLDVGHNPHAARALRRSLINLAFAQKRTAV
                     FSMLSDKDIDGVLEIVKDQFDEWYIAPLDVPRGMTLESLQNKLHEHSIENIQTFAAVR
                     EAYRAAASKAGENDRIVVFGSFHTVADVMSVL"
     gene            11943..12941
                     /gene="ftsN"
                     /locus_tag="WJJ54_000672"
     CDS             11943..12941
                     /gene="ftsN"
                     /locus_tag="WJJ54_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HEZ7341564.1"
                     /translation="MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSS
                     GPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDLAGEDKPSAADSEISEPENVGAP
                     LVLINDRLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKQ
                     KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKA
                     DKAESKKTAEKDRSDGKKHETAQKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSL
                     QRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKLRVHGIAGQVTNE"
     gene            12934..13431
                     /locus_tag="WJJ54_000673"
     CDS             12934..13431
                     /locus_tag="WJJ54_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEZ7341565.1"
                     /translation="MNNLPVADLLVSAIIAACIVLSAMRGVIAEAGSMAAWVVAFFFA
                     KLFAAPFADIAFASFQPRLFALALSFISLFVIACLIQKILRSLLTGAVSAVGLGFANR
                     ILGGVFGALKGILIITLLVMLASKTDLPDTEEWRQSYTLPFFVSLSEAVLNHSGGTAE
                     TPEDD"
     gene            13639..15183
                     /gene="purF"
                     /locus_tag="WJJ54_000674"
     CDS             13639..15183
                     /gene="purF"
                     /locus_tag="WJJ54_000674"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEZ7341566.1"
                     /translation="MCGVLGLVSHEPVNQLLYDGLQMLQHRGQDAAGIATAEGGTFHM
                     HKGKGMVREVFRTRNMRDLTGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHN
                     GNLTNTAELYENVCNKHLRHVNTSSDSEVLLNVFAHELRREVSKNADPHRLNADNIFN
                     AVAQVHRLVRGAYGVIAMIAGYGMLAFRDPYGIRPLVLGSQTDSEGRKSYAVASESVA
                     FNALTYDLERDIRPGEAVFVGFDGTMIARQCSDRAKLSPCLFEYVYFARPDSVIDGVS
                     VYQSRLDMGVSLAEKIKRELPVDGIDVVMPIPDTSRPSAMELAVHLDKPYREGLIKNR
                     YIGRTFIMPGQATRKKSVRQKLSPMETEFAGKSVLLVDDSIVRGTTSREIVEMVRAAG
                     ARKVYIASAAPEVRYPNVYGIDMPTREELIANGRSAAEIAAEIGADGIVFQDLGDLEA
                     VVKALNPKIESFDSSCFNGIYQTGDIDDAYLDRLSAEKSGCGGLKIHPSRMEHSISIS
                     DAGDEE"
     gene            15283..15774
                     /gene="greB"
                     /locus_tag="WJJ54_000675"
     CDS             15283..15774
                     /gene="greB"
                     /locus_tag="WJJ54_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HEZ7341567.1"
                     /translation="MSTETKNYITPAGWQALKNELYRLVNKERPEIVQIVNWAAGNGD
                     RSENGDYLYGKRRMREIDRRIRFLTKRLEAAVVIDPELREATDQVFFSATVGLLRGDG
                     REQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI
                     KID"
     gene            15833..16459
                     /locus_tag="WJJ54_000676"
     CDS             15833..16459
                     /locus_tag="WJJ54_000676"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEZ7341568.1"
                     /translation="MRKIRTKICGITTLEDAAAAAAAGADAVGLVFFQGSSRAVDIAR
                     AKKITAALPPFVSVVALFVNESAQNIRRILAEVPIHIIQFHGDEDDAFCRQFHRPYIK
                     AIRVQTASDIRNAADRFPDAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGG
                     LTPENVGEAVRITGAEAVDVSGGVEASKGKKDPAKVAAFIATANRLSR"
BASE COUNT         4616 a         4480 c         4064 g         3325 t
ORIGIN      
        1 aaaaacaaaa agccgcagaa atttaacgga agaaccgaac cccgaaaatc ggcttcccac
       61 cttcgcctga ataacagaac aaaggaagcg gaaataaaaa catcgggatt ctttttttaa
      121 attggcaata aaacaccaaa atgaataatt cacacaacaa aaaatagtca acaccgccaa
      181 atcggcgtaa aatacaagac attatcaccc ttaaaacggt aaaaccttat gaaaaccaaa
      241 cgttttaaaa ttaacgccat atccttatcc atctttcttg cctatgccct tacgccatac
      301 tcagaagcgg cattggtcag agacgatgtc gattatcaaa tattccgtga ctttgcagaa
      361 aacaaaggca aattttttgt cggcgcaacc gatttatcag tgaaaaacaa acaaggtcaa
      421 aacatcggca acgcattatc caacgtaccg atgattgatt ttagcgttgc agatgtcaac
      481 aaacgcatag caacggtagt cgatccccaa tatgctgtca gcgtcaaaca cgccaaagca
      541 gaagtccata ctttttatta cggtcaatac aacggtcata atgatgtagc cgacaaagaa
      601 aatgaatacc gcgttgtcga acaaaataac tatgaacccc ataaagcttg gggtgcgagc
      661 aacttaggcc gtctcgaaga ttataatatg gcgcgtttta acaagtttgt aaccgaagtt
      721 gcgccgattg caccaactga tgccggcggc ggattggata cctacaaaga taaaaaccgt
      781 ttttcctctt ttgtcagagt tggcgcaggc aggcaattag tttatgaaaa aggggcttat
      841 catcaagaag ggaaagaaaa aggctacgat ttgcgcgatc tttcacaagc ctatcgttat
      901 gccattgcag gtacacctta taaagatatt aatattgacc aaacaatgaa taccgaaggt
      961 ttgattggct ttggtaatca caatacacac tattcagcag aagaacttaa acaagcactc
     1021 tcgcaagatg cgttaacaaa ttacggcgta ttgggcgata gcggctctcc gttatttgct
     1081 tttgacaaac aaaaaaatca atgggtcttt ttgggaactt atgattattg ggcaggttac
     1141 ggaaaaaaat cttggcaaga atggaatatc tataaaaaag aatttgcaga tgaaatcaaa
     1201 caacgcgata acgccggcac catcaaaggt aatagagaac atcattggaa aaccacgggc
     1261 acaaacagcc atatcggttc gacagcggta aggcttgccg gcaatgaaag gggtgcaaac
     1321 aacggacaga atgttacctt tgaaaacaac ggcactttgg tattggatca aaacatcaac
     1381 caaggcgcgg gcggtctgtt tttcaaaggc gattacacag tcaaaggtgc aaataatgac
     1441 atcacttggc taggtgcggg gattgatgtt gccgacggca aaaaagtcgt ttggcaagtc
     1501 aaaaatccga aaggcgataa attagcgaaa atcggcaaag gcactttgga agtaaacggt
     1561 acaggcgtaa atcaaggcga attaaaagtc ggcgacggta cggttattct gaatcaacaa
     1621 gccgatgccg acaaaaaagt ccaggctttc tcccaagtcg gcattgtgag cgggcgcggt
     1681 acattggtat taaatagttc aaatcagatt aatcccgata acctatattt cggtttccgt
     1741 ggcggtcgtt tggatgccaa tggcaatgac ttgacttttg aacacatccg caacgtggat
     1801 gaaggtgcgc gcattgtcaa ccacaacaca ggtcacgcct ccacaatcac gctaacgggt
     1861 aaatctttga ttaccgatcc caaaaccatc tctattcatt atattcaaaa taatgatgat
     1921 gacgatgatg gttattacta ttaccgccct aggaaaccga ttccacaagg caaagatctt
     1981 tatttcaaaa actaccgtta ttacgcccta aaatccggcg gcagcgtgaa cgcaccgatg
     2041 cccgaaaacg gacaaacgga aaataacgac tggattttaa tgggcagcac acaagaagaa
     2101 gccaagaaaa acgcgatgaa ccacaaaaac aatcagcgta ttagcggttt tagcggtttc
     2161 tttggcgaag aaaacggaaa aggacataac ggcgcattaa accttaattt caacggcaaa
     2221 agcgcacaaa accgtttctt gttaacaggc ggtgccaatt taaacggaaa aataagcgta
     2281 actcaaggca atgtcttgtt atcaggtcgt ccaacaccac acgcaagaga ttttgtgaac
     2341 aaatcttcag cccgaaaaga cgcacatttc tccaaaaaca atgaagtcgt atttgaagac
     2401 gactggataa accgcacatt caaagccaca gaaattgcgg ttaatcaatc cgcatcattc
     2461 tcttccggca gaaatgtatc caacattacc gccaacatca ccgcaacaga caacgccaaa
     2521 gtaaatttgg gttacaaaaa cggcgatgaa gtttgcgtgc gctcggacta taccggttac
     2581 gttacctgca acacagacaa cttatccgat aaggctttaa acagctttgg agcgacacag
     2641 attaacggca atgtgaattt gagtcagaat gcggcattgg tcttaggcaa ggctgcatta
     2701 tgggggcaaa ttcaagggca aggaaacagc agcgtcagcc taaaccaaca tagcaaatgg
     2761 catttgaccg gcgacagcca agtacacaat ctgtcattgg cggatagcca tattcatttg
     2821 aacaacgctt ccgacgcgca aagtgcaaat aaataccaca cgctcaaaat caatcattta
     2881 tccggtaacg ggcattttca ttatctgacg cacctggcga aaaatcttgg ggataaagtg
     2941 cttgtgaagg aatccgcatc cggtcattat cagctccatg ttcaagataa aacaggcgaa
     3001 cccaatcagg aagggctgaa tctctttgat gcatcatccg tacaagaccg ttcgcacctt
     3061 tctgtttcct tggcgaataa ccatgtagat ttaggcgcat tgcgttatac aatcaaaaca
     3121 gaaaacggta ttacccgatt gtacaatcct tatgccgaga accgccgccg agtcaaaccg
     3181 gccccgtctc ctgccacaaa cacggcttct caagcacaaa aggcaacaca aacggacggt
     3241 gcacaaattg ccaagcctca aaatatcgtc gtcgcaccac ctagcccgca ggcaaatcaa
     3301 gccgaagaag caaaacgcca gcaagcaaaa gcggagcaag tgaagcgtca gcaagcagaa
     3361 gcagagcgta aatcggcaaa gttagcaaaa caaaaagcag aagccgaacg cgaagcaaga
     3421 gagctggcga cccgccaaaa agcagaacaa gaacgcagca gcgccgaact tgcacgtcga
     3481 catgaaaaag aacgcgaagc ggcagagttg tcggcaaaac aaaaagtcga agccgaacgt
     3541 gaggctcaag cattggcggt acgccgaaaa gcagaagccg aagaggcaaa acgccaagct
     3601 gcagagcttg cacgccggca tgaaaaagaa cgcgaagcgg cagagttgtc ggcaaaacaa
     3661 agggtcgggg aagaggaacg ccgtcaaaca gcccaatccc agccgcaacg ccgcaaacgc
     3721 cgtgccgcac cgcaggatta tatggcagct tcccaagacc gtcctaaacg ccgcggacac
     3781 cgttcggtac agcaaaacaa tgtggaaatt gcccaagccc aagcagaact tgcgcgccga
     3841 cagcaggaag aacgcaaagc ggcagagttg ttggcaaaac aaagggcaga agccgaacgt
     3901 gaggctcaag cattggctgc gcgccgaaaa gcagaagccg aagaggcaaa acgccaagct
     3961 gccgaacttg cacatcgcca ggaagcagaa cgcaaagcgg cagaattgtc ggcaaaccaa
     4021 aaagccgcag ctgaagccca agcattggcg gcacgccaac aaaaagccct tgcgcgtcaa
     4081 caggaagaag cacgaaaagc tgcagagtta gccgtcaaac aaaaagcgga aaccgaacgc
     4141 aaaaccgccg aacttgccaa gcaaagggca gcagccgaag cagcaaaacg ccagcaagaa
     4201 gctcgccaga ccgccgaact tgcacgtcgt caagaagcgg aacgccaagc agcagagttg
     4261 tcggcaaaac aaaaagccga aacagatcga gaagcggcag aatcggcgaa acgaaaagct
     4321 gaggaagaag agcaccgtca agcagcccaa tcccagccgc aacgccgaaa acgccgtgcc
     4381 gcacctcagg attatatggc agcttcccaa aatcgtccga aacgtcgcgg acgcagatct
     4441 actctgccgg caccgccctc gccatcattt gattcgtcag cttacgcagc acccagggcc
     4501 ttgcataatc cggactggta tgaaaatgac tatgcagaaa tcccctttga tgcgttggaa
     4561 gatgaagatg tatccgaatc ggttgacaca tcagacaaac agcctcaaga caatacggaa
     4621 cttcatgaaa aagttgagac agtgagtttg caaccaagag ccgcgcagcc gcgagcccaa
     4681 gccgccactc agccgcaagc ccaagccgcc gcgcaagctg atgcagtcag caccaatacc
     4741 aactcggctt tatctgacgc aatggcaagc acgcaatcta tcttgttgga tacaggtgct
     4801 tcattaacac ggcacattgc acaaaaatca cgtgctgatg ccgaaaaaaa cagcgtttgg
     4861 atgtcgaaca tcggttatgg ccgtgattat gcttccgcac aatatcgccg gtttagttcg
     4921 aaacgcacgc aaacacaaat cggcattgac cgcagcttgt ccgaaaatat gcagataggc
     4981 ggcgtattga cttactctga cagtcagcat acttttgatc aggcgagcgg caaaaatact
     5041 tttgtgcaag ccaaccttta tggtaagtat tatttaaatg atgcttggta tgtggccggc
     5101 gatattggtg caggcagctt gagaagccgg ttacaaacgc agcaaaaagc aaactttaac
     5161 cgaacaagca tccaaaccgg ccttactttg ggcaatacgc tgaaaatcaa tcaattcgag
     5221 attgtcccca gtgcgggaat ccgttacagc cgcctgtcat ctgcagatta caagttgggt
     5281 aacgacagtg ttaaagtaag ttctatgtca gtgaaaacac tgacggccgg actggatttt
     5341 gcttatcggt ttaaagtcgg caaccttacc gtaaaaccct tgttatctgc agcttacttt
     5401 gccaattatg gcaaaggcgg cgtgaatgtg ggcggtaatt ccttcgccta taaagcagat
     5461 aatcaacagc aatattcagc aggtgccgcg ttactgtacc gtaatgttac attaaacgta
     5521 aatggcagta ttacaaaagg caaacaattg gaaaaacaaa aatccggaca aattaaaata
     5581 cagattcgtt tctaaaatac taaattcata gcaaaataaa atgccgtctg aactcaggct
     5641 tcagacggca tttttatagt ggattaacaa aaatcaggac aaggcgacga agccgcagac
     5701 agtacagata gacggcaagg cgaggcaacg ccgtactggt ttttgttaat ccactatatc
     5761 agacggacga ggttacagtt taatcccttt gagcttcgcg acggtattga tgtctttgtc
     5821 gccacgacct gagaggttga ccagaatcac ttggtcttta cccattttcg gcgcattttt
     5881 caccgcccaa gcaacggcgt ggctggattc gagcgcgggg atgatgccct catatttgca
     5941 caacaaatca aaggcttcga gtgcttcttc gtctttggcg gcggtgtatt cgacgcgctt
     6001 gatgtcgtgc agatggctgt gttccgggcc gatgccgggg taatccaagc ctgcggaaac
     6061 agagtgcgta cccaaaacct gaccgttttc gtcctgcatc agatagctgc ggaaaccgtg
     6121 caatacgcca atcggtgcgc ccgaagtaat cggcgcggcg tgatcggggg tgttcacgcc
     6181 caaaccgcca gcctccacgc cgacgaggcg cacgttttct tcgccgatat acgggtggaa
     6241 caaaccgatg gcgttcgatc cgccgcccac gcaggcaacg gcaacgtcgg gctgtctgcc
     6301 gatggcttcc aacatttgtt ctttggcttc attgccgatc acgcattgaa agtcgcgcac
     6361 catttcggga tacggcgcgg gaccggcggc ggtaccgatg atgtagaatg tgtcatccac
     6421 gcgggcgacc cattcgcgca tggcttcgtt catcgcgtct ttcaaagtac ggctgccgct
     6481 gtcaacgccg acgacattcg cgcccaataa tttcatacgg aacacgttgg gcatttggcg
     6541 ttggatgtcg tccgcaccca tgtacacgtc gcaagtcatg ccgaagcggg cggcaacagt
     6601 ggcactcgcc acgccgtgct gacccgcgcc ggtttcggcg atgacgcgtt ttttacccat
     6661 acgttttgcc aacagtgcct gaccgatggt gttgttgact ttgtgcgcgc cggtgtggtt
     6721 caagtcttcg cgcttcaacc aaatttgcgc gccacccaaa tgctcggaca atcgcgcggc
     6781 atggtaaacg gggctgggcc tgccgacgta gtgtttcaaa tcgcggtgga attcttccca
     6841 aaacgacggg tcgtttttcg ctgccttata ggcatccgcc agctcttgca aggcgggaat
     6901 cagggtctcg gaaacataaa gcccaccgtg ttcgccgaaa acgcccttct cgtcgggtgc
     6961 gtggtaattc ttcatcagat ttcgtccttg tgcttcaaat tttcagacgg caatttatag
     7021 tggattaaca aaaaccggta cggcgttgcc ccgccttgcc gtactatttg tactgtctgc
     7081 ggcttcgccg ccttgtcctg atttttgtta atccactata tttttcaaac atgccgtccg
     7141 aacgggaaat tgtcggcaat tataactgct tttcacacaa gcccgccatt tcaaaaaacg
     7201 cccgatacgc cgccgctttt ttcgccaaac tcaaaggata ggcacgcgaa gtcgaaggca
     7261 ggcgcgtcag cgtcaaatcc cgtccggcaa acggaaacgg cacggtttcg cccgttttcg
     7321 gcattttgat gccgccaccc tgaatatcga gcaggatttc cgtcgccttg ccgcctgtcg
     7381 tacaaatatg gcggcactcg ggcatctgcg ccaacaccgc cgccaaatca acggtttcaa
     7441 ctacctttaa aaacttgtcg gacgcattgc cgtgctgacg taccgctttc aacacggtcg
     7501 ggcaggacgc aatcccccgt tcgtgcaaaa acgccttgat tttctcggca tcaaacgctt
     7561 tttcagacaa cctttggaaa tgcgccgcat cattaaaaaa caccagcccg taaacgcgcc
     7621 acatatcgtt ttggaaattc ggataatgaa actgcatcgc gcgtttgtct tccttgggcg
     7681 gaaacgtccc catcatcatg accgcagcct tcggcggcaa cacggaatcg aagggatggg
     7741 tttcgatttc aagcagattt tcagacacgt tcaatcctcc aacaggcaaa acggcagaca
     7801 gccggttttt gcaccaaacc gccaaacacg gcaagccttc aaacagcatt atcacgccct
     7861 gccgttttcg gttacaatgc cgacatcaaa cggatactgt aaacacattt atgtttcaac
     7921 acacaggacg acacttaaag caccgcccta tgtgccatcc tgatttggaa ggggttacgc
     7981 ccctcccaaa tagagtctga ttctaccgcc ccgaaggaca gatgtccaag tggcggggtt
     8041 tcaaccgaaa aggaaacacg atgaaagaac acaaagcccg caagcgtttc gggcagaatt
     8101 ttttgcagga cacgcggatc atcagcgata ttgtcaacgc cgtgcgcccg caggcggatg
     8161 atgtcgtgat tgaaatcggt ccgggtttgg cggcgattac cgaacctttg gcgaaaaagc
     8221 tgaaccgcct gcacgttgtc gaaatcgacc gcgacatcgt atgccgtctg aaaacgctgc
     8281 cgtttgcgga caagctcgtc attcatgaag gcgacgtgtt gcagtttgat ttcaacggca
     8341 tcgcaggcaa aaagaaaatc gtcggcaacc tgccgtacaa catttccacg ccgcttttgt
     8401 tcaagctggc ggaggtggcg gacgatgtcg tcgatatgca ctttatgctg caaaaagaag
     8461 tggtcgagcg tatggttgcc gcgccgaaaa gcaacgacta cggccgcttg ggcgtgatgt
     8521 tgcaatattt cttcgatatg gaaatgctga ttgacgtgcc gcccgaatcg ttcgaccccg
     8581 cgccgaaagt cgattccgcc gtcgtccgca tgattccggt gaaacaccgc atcggcaggg
     8641 cggacgattt cgagtatttc gccaaactcg tgaaactcgc cttccaccaa cgccgcaaaa
     8701 ccatacgcaa caatctgaaa aagcttgcag gcgacgatga tttgcaggca gtcggcatca
     8761 atccgcaaga ccgcgccgaa catatcgcgc cggaaaaata cgtagcgttg agcaattatc
     8821 tggcgggcaa ggccgtctga aaagggagta agccgatgaa gaaatacctg cttttacccc
     8881 tgatactgcc gcttgcagcc tgcctgacca atccgaacga ccgttttttt gacggcagac
     8941 gctacacgct tcatcatatg gagctcccgt aacgacaacc tgcaacggca aatgccgtct
     9001 gaaagaaaag acatgatcaa attcaaaaac gtacacaaac atttcaaaga cctgcacgtc
     9061 atcaacggcg taaacttgga aatcaaaaaa ggcgaagtgg tcgtcgtctg cggaccttcg
     9121 ggcagcggca aatccacact catccgcacc gtcaaccagc ttgaaagcat cgaaagcggc
     9181 gagatttggg tggacggcat caacgttgcc gacccaaaaa ccgatttgaa caaaatccgc
     9241 gaagaagtcg gctttgtgtt tcaaagtttc aacctctacc cgcacctgac cgtgttggaa
     9301 aacattaccc tcgcaccgat gaaggttaag gggcaaaatg cggaacaggc ggagaaaaag
     9361 gcaatggagc ttttggaacg cgtcggactg gcacacaaaa aagacgcctt cccttcccaa
     9421 ctttccggcg gccagcagca acgcgtggcg attgcacgcg gtttggcgat ggaaccgcgc
     9481 gtaatgttgt ttgacgaacc gacctccgca ctcgaccccg aaatggtcgg cgaagtgttg
     9541 aaagtgatga aagacttggc agaaagcggc atgacgatga tgtgcgtaac ccacgaaatg
     9601 gggtttgccc gcgaagttgc cgaccgcgtg attttcgtcg ataaagggca aatcctcgaa
     9661 gacgaaacgc ccgaagcgtt tttcaccaac ccgaaacacg aacgcgccaa gcagttcctg
     9721 caacaggtca tgacccattg atgctatgcc gtctgaaaac cgaacgttca gacagcatat
     9781 cccgacaccg caagatgatt gagaaagaaa accatgtatt ttgttgaccg caccgccgtc
     9841 gtcctcaagc cgaccgtccg ctttttggaa tggctcaaaa gcaccgacga aaatatgccc
     9901 gacctgacca tagaacagct tcgtgccaac tgttccgtct tcctcgttcc gcagttcgac
     9961 gaaccggaag ccgtcgtttc ctactttgac gaacgctacc gccagatttt cgaggcggag
    10021 ctggcaggtt gggacatcaa taaggataaa tggccgcaag atatggggct gaaggcgttt
    10081 tgggaatttt tcgacatcga aatccacgat atggtgttgg acatggaaga agcggaattg
    10141 aacattaccc ccgtgttcga caacatgatg taaggctgtg cgcgcctttc agacggcatt
    10201 gaggccgtcc cgcatcctga acatcctgac cgtatcgctc cactcggctt cccttgccgt
    10261 ctgcctgacc tggttttacg gccggatgat gtggttcggt ttggcggctt tggcggcaag
    10321 ttacgcatac tcgctcagga taacgaatct gaaacaccgc catgccataa ccgccattac
    10381 catagaccgc gacggacagg cggaaatcgt atccggcaaa gaaaaaacgg caaaggcggc
    10441 ggcactgtcg ggcagcagta tggttacgcc ttatgcctta ttcttacaat gggacaccgg
    10501 cggcaaaacc gtccgccaat gcatcatacc cgacatgacg gacccggaat cctaccggcg
    10561 gctgaaagtc tgggtgcttt ggcggcagcc gaaaaaaacc gccgaaaccg atacaccaag
    10621 ctgatttcag acggcatttg aacacggaac actcaatgaa aacactgcaa gactggctct
    10681 cgcatttgga aaccgcccac agcggcggct tgatcgatat gggcttggaa cgcgtaagcg
    10741 aagtgaaaaa acggatgaag ctcacgccgc aatgccccgt cgtcgttgtc gcgggaacaa
    10801 acggcaaagg ttcggtctgc gcctacctga cacagattta caaacaggcg ggctacaaaa
    10861 ccggcacact gaccagcccg catttattgc gttacaacga acgcatcgcc atcaacgccg
    10921 aacccgtttc ggacgatacg attattgcct ctttcgagcg catcgaagcc gcgcgcggcg
    10981 aaatatcact gacttatttt gaattcaata cgttggcggc ggtcgacatc ttcatgcgcg
    11041 aacaggttga cgtgatgata ttggaagtcg gcttgggcgg acgcttggac gcggtcaacg
    11101 cgtttgacgg cgattgcgcg gtggttacca gcgtggattt ggaccatcag gcatttttgg
    11161 gcgatacggt cgagcaggtc ggctttgaaa aagcaggcgt gttccgcagc ggcaaacccg
    11221 ccatctgcgg tcaaaatccc gcgcccgcat cgttgctttc acacgccgaa gccataggcg
    11281 cgaaactgct gatggtgcag cgcgatttcg agtttcacgc gctggaaaac atccaatgga
    11341 actaccgctt ccgaccgcag cattcagaca gccccgctcg caaccgtaat tccctgccct
    11401 tccccgcatt gcgcggcgca taccaacttt ccaacgccgc ctgcgcgctg accgtgttgg
    11461 aatgtttgaa cgacaaattg ccggtggaca tcggtgcaat caaacgcgga ttgctgctgg
    11521 ttgaaaatcc cggacgcttc caagtcctgc ccggccggcc gctgaccgtt ttggacgtcg
    11581 gacacaatcc ccacgctgcc cgcgccctgc gccgcagcct gattaatttg gcgtttgcgc
    11641 aaaaacgcac cgccgtattc agtatgctgt ccgacaaaga catagacggc gtgttggaaa
    11701 tcgttaaaga ccagtttgac gagtggtata tcgcaccgtt ggacgtaccg cgcggcatga
    11761 cgctcgagag cctgcaaaac aaactgcacg aacacagcat cgaaaacata cagacattcg
    11821 ccgccgtccg cgaagcttac cgggcggcag cctcaaaagc gggcgagaac gacagaatcg
    11881 tcgttttcgg ctcatttcat accgttgccg atgtcatgtc ggtactttaa aaggaaactt
    11941 ctatgtccga aaacaaacaa aacgaagtcc tgagcggtta cgaacaactc aaacggcgca
    12001 accgccgccg cctcgtaacg gcaagttgcc tggttgccgc ctcctgcatc ctgctggcag
    12061 ccgccctcag ttccggccct gccgaacaga ctgccggcga aacaagcggc gtagaaaaca
    12121 aagcggcagg tgcggcacaa acccctgcct tgaaatccgc cgccgacaaa ccgcaggact
    12181 tggcaggcga agacaagcct tctgccgccg acagcgaaat cagcgagcct gaaaacgtag
    12241 gcgcgccgct ggtgctgatt aacgaccgcc tcgaagacag caacatcaaa ggtttggaag
    12301 catccgagaa actgcaacag gcagaaaccg ccaaaaccgc accgaagcag gcaaaacaac
    12361 gcgctgccga aaaagtgccg gcaactgccg acagtacgga tacggtagcg gttgaaaaac
    12421 agaaacgcac tgccgaaaca aaaccgcaaa aagcggaacg cactgccaaa gccaagccca
    12481 aagccaaaga aaccaaaacc gccgaaaaag ttgccgacaa accgaaaact gccgccgaaa
    12541 aaaccaaacc ggatacggca aaatccgaca gcgcggtaaa agaagcgaaa aaagccgaca
    12601 aggctgaaag caaaaaaaca gccgaaaaag accgttcgga cggcaaaaaa cacgaaacgg
    12661 cacaaaaaac cgacaaagcg gacaagacca aaaccgccga gaaggaaaaa tccggtaaaa
    12721 aagccgccat tcaggcaggt tatgccgaaa aagaacgcgc cttaagcctc cagcgcaaaa
    12781 tgaaggcggc gggtatcgat tcgaccatca ccgaaattat gaccgacaac ggcaaagttt
    12841 accgcgtcaa atcaagcaac tataaaaacg caagggatgc cgaacgcgat ttgaacaaat
    12901 tgcgcgtaca cggtatcgcc ggtcaggtaa cgaatgaata acctccccgt tgccgacctc
    12961 ctcgtctccg ccatcatcgc cgcctgcatc gtgctatccg cgatgcgcgg cgtgattgcg
    13021 gaggctggct caatggcggc atgggtggtt gccttttttt tcgccaaact ctttgccgca
    13081 cccttcgccg acatcgcctt tgcatcgttc caaccccgcc tgtttgcatt ggctctgtcg
    13141 ttcatttccc tattcgtcat tgcctgtctg atccagaaaa tactccgctc gctgctgacc
    13201 ggggcagttt cggcggtcgg tttgggcttt gccaaccgca ttttgggcgg cgtattcggt
    13261 gcattgaaag gcattttgat tattaccctg ctggtcatgc tcgcttcaaa aaccgacctg
    13321 cccgataccg aagaatggcg gcaatcttac acactgccgt ttttcgtatc gctttccgaa
    13381 gccgtgttga accatagcgg cggcacggcg gaaactccgg aagacgattg attgccatac
    13441 ggatatttca gacggcattc tcttttatgc cgtctgaaat gttttttcct ttcctcagcc
    13501 atatcacaga ttaaatctta tcctccataa acccacctat ctgtccttcg ctcaaatatt
    13561 gtcaacaatt caggcaaaaa accaccgttt actttataat tccgttttac ccttaaacct
    13621 cgaatcggag aagacgatat gtgcggcgta ttaggtttgg tcagtcatga acccgtgaac
    13681 cagcttctgt acgacggctt gcagatgttg cagcacaggg ggcaggatgc ggcgggcatt
    13741 gcaacggcgg aaggcggtac cttccatatg cacaaaggca aaggcatggt gcgcgaagtg
    13801 ttccgcacac gcaatatgcg cgatttgacc ggcaacgccg gcatcgccca cgtccgttat
    13861 cctactgcgg gcaacgcagg cagcagcgcg gaggcgcagc ctttctacgt cagctcgccg
    13921 ttcggcatcg ttttggcgca caacggcaac ctcaccaaca ctgccgaact gtatgaaaac
    13981 gtgtgtaaca aacacctgcg ccacgtcaac accagctccg attccgaagt cttgctcaac
    14041 gtattcgcgc acgaattacg ccgcgaagtc tctaaaaacg ccgacccgca ccggctcaat
    14101 gccgacaata ttttcaacgc cgttgcccaa gtccaccgcc tggtgcgcgg cgcatacggt
    14161 gtgattgcca tgattgcggg ctacggtatg ctcgccttcc gcgaccctta cggcatccgc
    14221 ccgctggtat tgggttcgca aaccgacagc gaaggcagaa aatcctatgc cgtcgcctcc
    14281 gaatccgtcg ccttcaacgc gcttacctac gatttggaac gcgacatccg gccgggcgaa
    14341 gcggtatttg tcggctttga cggcacaatg attgcccgcc aatgcagcga ccgtgccaaa
    14401 ctcagcccct gcctttttga atatgtttat tttgcccgcc ccgactctgt gattgacggc
    14461 gtatccgttt accaatcgcg cttggatatg ggcgtgtcgc tggcagaaaa aatcaaacgc
    14521 gagctgcccg tggacggcat cgacgttgtg atgcccatcc ccgacaccag ccgccccagc
    14581 gcgatggagc ttgccgtcca tctcgacaaa ccctaccgcg agggtttgat taaaaaccgc
    14641 tatatcggcc gcacctttat tatgcccgga caggcgacgc gcaaaaaatc cgtgcgccaa
    14701 aaactcagcc cgatggaaac cgaatttgca ggcaaaagcg tgttgctggt ggacgactcc
    14761 atcgtgcgcg ggacgaccag ccgcgaaatc gtcgaaatgg tacgcgcggc gggcgcgcgc
    14821 aaagtctata tcgcctccgc cgcgcccgaa gtgcgctatc ccaatgtgta cggcattgat
    14881 atgcccacgc gcgaagagtt gattgccaac gggcgcagcg cggcggaaat cgccgccgaa
    14941 atcggcgcgg acggcatcgt atttcaagac ttgggagatt tggaagccgt cgtcaaagca
    15001 ctcaatccga aaatcgaatc cttcgattcg tcctgtttca acggcattta tcagacaggc
    15061 gacatcgatg atgcctacct cgaccgcctg tctgccgaga aatccggctg cggcggcctg
    15121 aaaatccacc cgagtaggat ggaacacagc atcagcatca gcgatgcggg cgacgaagaa
    15181 taaggcttcc caaaccgcga tgccgtctga aatccgaacg ccgggttttc agacggcatt
    15241 tcccatatcg gcatcacatt tcccatttca tccgcacgca atatgagtac cgaaaccaaa
    15301 aactacatta cacccgccgg ctggcaggca ttgaaaaacg aactttaccg gctggtcaac
    15361 aaagaacgcc ccgaaatcgt ccaaatcgtc aattgggcgg caggcaacgg cgaccgcagc
    15421 gaaaacggcg actatcttta cggcaaacgc cgtatgcgcg aaatcgaccg ccgcatccgt
    15481 ttcctgacca agcgtttgga ggctgccgtc gtcatcgatc ccgaattgcg cgaagcgacc
    15541 gaccaagtgt ttttcagcgc gaccgtcggc ctgttgcgcg gcgacgggcg cgagcaaacc
    15601 gtcaaaattg tcggcatcga tgaaatcgat accgcgcaaa acaaaatttc ttggatttcg
    15661 ccgttggcgc gttgcctgat taaagcgcgc gaaggcgacg aagtggtttt gaacacgccg
    15721 gaagggcgtg aggaaattga aatcctttct gtcgaataca tcaaaatcga ctgatcggga
    15781 atgccgtctg aaacggcaca aacgcatcgt ttcccaaata aaggaatacc gaatgaggaa
    15841 aatccgcacc aaaatctgcg gcatcaccac actggaagac gcagcggccg ccgcagcggc
    15901 aggtgcggat gccgtcgggc tggtcttttt ccaaggcagc agccgggccg tcgatattgc
    15961 ccgcgcaaaa aaaatcaccg ccgcactgcc gccgtttgtc agcgttgtcg cccttttcgt
    16021 caacgaaagc gcgcaaaaca tccgccgtat ccttgccgaa gtaccgatac acatcatcca
    16081 attccacggc gacgaagacg acgcattctg ccgccagttc caccgcccct atatcaaggc
    16141 cattcgtgtt cagacggcat cagacatccg aaacgccgcc gaccgcttcc ccgacgctca
    16201 ggcactgctg ttcgatgcct accacccttc ggaatacggc ggcaccggac accgcttcga
    16261 ctggacgctg ctggcggaat attcgggcaa accgtgggta cttgccggcg ggctgacccc
    16321 tgaaaacgtc ggcgaagccg tccgcatcac cggagcggaa gcggtcgatg tatccggcgg
    16381 cgtggaagcg tctaaaggca aaaaagaccc agccaaagtc gccgccttta tcgcaaccgc
    16441 caaccgccta tcccgttaaa gcaacaaaaa ttgccgccgg aatga
//
LOCUS       DAWKJW010000028        16156 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.028, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000028 DAWKJW010000000
VERSION     DAWKJW010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16156
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.028"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(48..1214)
                     /gene="odhB"
                     /locus_tag="WJJ54_000677"
     CDS             complement(48..1214)
                     /gene="odhB"
                     /locus_tag="WJJ54_000677"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HEZ7341569.1"
                     /translation="MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKV
                     VLEVPSPQAGVLVEIVAQDGETVVADQVLARIDTAATAAAEAPAAAPAEAAPAAAPAA
                     AQNNAAMPAAAKLAAESGVDVNALQGSGRDGRVLKEDVQNAAAKPAAAAAPAGARPEE
                     RVPMSRLRARVAERLLASQQENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGVKLGFM
                     SFFVKAAVAALKKYPVVNASVDGKDIVYHGYFDIGIAIGSPRGLVVPILRDADQMSIA
                     DIEQAIVDYAKKAKDGKIAIEDLTGGTFSITNGGTFGSMMSTPIINPPQSAILGMHAT
                     KERAVVENGQVVVRPMMYLALSYDHRIIDGREAVLTLVAIKDALEDPARLLLDL"
     gene            complement(1314..4142)
                     /locus_tag="WJJ54_000678"
     CDS             complement(1314..4142)
                     /locus_tag="WJJ54_000678"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEZ7341570.1"
                     /translation="MMDEKLNFSYLFGSNAPYIEELYEAFLENPDTVDEKWKQYFTDL
                     SKQPGTVAVDVAHTPIRESFVTLAKKKIASAVAGGADEAMLKKQVSVLRLISAYRIQG
                     VGAAQLDPLKRIPPRDIEALDPKFHGLSDADMALQFNMGEGDFANRGKLPLSQIISNL
                     KQTYCGHIALEYIYIPNTEERRWVRNYFESVLSTPHYNADQKRRILKEMTAAETLERY
                     LHTKYVGQKRFGVEGGESAIAGLNYLIQNAGKDGVEEVIIGMAHRGRLNVLVNILGKK
                     PGDLFAEFEGRAEIKLPSGDVKYHMGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEG
                     SARAKQKRLGENGRDKVLPVLIHGDSAFIGLGVNQATFNLSKTRGYTTGGTVHIVINN
                     QIGFTTSDIRDTRSTVHCTDIAKMVSAPVIHVNGDDPERVCFAIQAALDYRKKFHKDI
                     VIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQHLGARALYTEQLIAEGVVTQAEADGYI
                     QAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGKDWREHIETGLPAADIERLTEKFTA
                     VPEGFALHPTAKRVIEARKAMASGKQAIDWGMAETLAYASLVTKGHGVRISGEDSGRG
                     TFSHRHAVLHDQKREKWDDGTYVPLRHMGEGMGEFLVIDSILNEEAVMAFEYGFACSA
                     PDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLTTILPHGYDGQGPEHSSAR
                     VERWLQLCSENNMQVIMPSEASQMFHLLQRQVLGSYRKPLVIFMSKRLLRFKGAMSPL
                     ENFTEGSTFRPVIGDTAERASNDSVKRVVLCAGQVYYDLEAGRAERKLEDDVAIVRVE
                     QLYPFPYDEVKAELAKYPNARSVVWAQEEPKNQGAFYQIRHRIEDVISEEQKLSYAGR
                     PSSASPAVGYSSKHIAQLKQLVEDALAL"
     gene            complement(4347..5630)
                     /gene="gltA"
                     /locus_tag="WJJ54_000679"
     CDS             complement(4347..5630)
                     /gene="gltA"
                     /locus_tag="WJJ54_000679"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HEZ7341571.1"
                     /translation="MSKSIKLNVPGQAGLELPVLEASIGHDVVDIRGLTKNTGLFSFD
                     PGFVSTASCESKITYIDGDQGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKA
                     EFDNTVRRHTMVHEQLTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDISNPEHRKI
                     AIYRLISKIPTIAAMCYRYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLAR
                     ALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKML
                     DEIGDVSNVAAYMEGVKQRKYRLMGFGHRVYRNMDPRASIMRETCYEVLKELGLEDSP
                     KFKLAMELEQIALKDPFFIERKLYPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWI
                     SHWHEMISDPSLKIGRPRQLYTGSERRDYVPPGER"
     gene            complement(5742..5990)
                     /locus_tag="WJJ54_000680"
     CDS             complement(5742..5990)
                     /locus_tag="WJJ54_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEZ7341572.1"
                     /translation="MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELS
                     EFSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA"
     gene            complement(5994..6701)
                     /locus_tag="WJJ54_000681"
     CDS             complement(5994..6701)
                     /locus_tag="WJJ54_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEZ7341573.1"
                     /translation="MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA
                     QDDTLSFRRSCREGICGSDGMNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIV
                     DMTQFFKQYHSVKPYVVNDNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFW
                     WNPDKFVGPSGLLNAYRFIADSRDTITNERLDNLNDPYRLFRCHTIMNCIDVCPKHLN
                     PTRAIGKIKEIMLKRAV"
     gene            complement(6821..8584)
                     /gene="sdhA"
                     /locus_tag="WJJ54_000682"
     CDS             complement(6821..8584)
                     /gene="sdhA"
                     /locus_tag="WJJ54_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HEZ7341574.1"
                     /translation="MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRS
                     HTVAAQGGISASLGNVQEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHM
                     GMPFDRVESGKIYQRPFGGHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQF
                     FVEWTAQDLIRDENGDVVGVTAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMN
                     TGDGLGICARAGIPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILLNADGERFMERY
                     APTVKDLASRDVVSRAMAMEIYEGRGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISI
                     QFAGIDPIKDPIPVVPTTHYMMGGIPTNYHGEVVVPQGDEYEVPVKGLYAAGECACAS
                     VHGANRLGTNSLLDLVVFGKAAGDSMIKFIKEQSDWKPLPADAGELTRQRIERLDNQT
                     DGENVDALRRELQRSVQLHAGVFRTDEILSKGVREVMAIAERVKRTEIKDKSKVWNTA
                     RIEALELDNLIEVAKATLVSAEARKESRGAHASDDHPERDDENWMKHTLYHSDTNTLS
                     YKPVHTKPLSVEYIKPAKRVY"
     gene            complement(8587..8928)
                     /gene="sdhD"
                     /locus_tag="WJJ54_000683"
     CDS             complement(8587..8928)
                     /gene="sdhD"
                     /locus_tag="WJJ54_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HEZ7341575.1"
                     /translation="MVERKLTGAHYGLRDWAMQRATAVIMLIYTVALLVVLFALPKEY
                     SAWQAFFSQTWVKVFTQVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVG
                     CLVYSIKVIWG"
     gene            complement(8922..9299)
                     /gene="sdhC"
                     /locus_tag="WJJ54_000684"
     CDS             complement(8922..9299)
                     /gene="sdhC"
                     /locus_tag="WJJ54_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HEZ7341576.1"
                     /translation="MSAKPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYF
                     LSGTLSQESAFETYRAIVSHPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTA
                     RNTAKAVFASALVLTVVLGALLW"
     gene            complement(9578..10981)
                     /locus_tag="WJJ54_000685"
     CDS             complement(9578..10981)
                     /locus_tag="WJJ54_000685"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ7341577.1"
                     /translation="MKKIQADVVVLGGGTAGMGAFRNARLHSDNVYLIENNVFGTTCA
                     RVGCMPSKLLIAAAEARHHALHTDPFGVHLDKDSIVVNGEEVMQRVKSERDRFVGFVV
                     ADVEEWPADKRIMGSAKFIDEHTVQIDEHTQITAKSFVIATGSRPVILPQWQSLGNRL
                     IINDDVFSWDTLPKRVAVFGPGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSD
                     EAKAVFGEELKLHLDAKTEAKLDADGNVEVHWEQDGEKGVFVAEYMLAAVGRRPNVDN
                     IGLENINIEKDARGVPVADPLTMQTSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAG
                     RYPNIGGGLRRSTIGVVFTSPQIGFVGLKYAQVAAQYQADEFVIGEVSFKNQGRSRVM
                     LVNKGHMRLYAEKATSRFIGAEIVGPAAEHLAHLLAWAHQMKMTVPQMLDMPFYHPVI
                     EEGLRTALRDADAKLKA"
     gene            complement(11230..11967)
                     /locus_tag="WJJ54_000686"
     CDS             complement(11230..11967)
                     /locus_tag="WJJ54_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HEZ7341578.1"
                     /translation="MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLP
                     GAFTPTCSSSHLPRYNELFGAFKENGVDAIYCVSVNDTFVMNAWAAEEESDNIYMIPD
                     GNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTM
                     LKFVAPDWKAQESVAIFTKPGCQFCAKAKQALQDKGLSYEEIVLGKDATVTSVRAITG
                     KMTAPQVFIGGKYIGGSEDLEAYLAKN"
     gene            complement(12244..14520)
                     /gene="metE"
                     /locus_tag="WJJ54_000687"
     CDS             complement(12244..14520)
                     /gene="metE"
                     /locus_tag="WJJ54_000687"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEZ7341579.1"
                     /translation="MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLAVAKDLRE
                     KNWKHEAAANADYVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGN
                     KDQFAIEMTKWFDTNYHYLVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTIVGPL
                     TFLWVGKEKGAVEFDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALTVDLPKEWV
                     EAYKDVYATLNKVSAKILLSTYFGSVAEHAALLKSLPVDGLHIDLVRAPEQLDAFADY
                     DKVLSAGVIDGRNIWRANLNKVLETVEPLQAKLGDRLWISSSCSLLHTPFDLSVEEKL
                     KANKPDLYSWLAFTLQKTQELRVLKAALNEGRDSVAEELAASQAAADSRANSSEIHRA
                     DVAKRLADLPANADQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARAAFK
                     KGELSAADYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY
                     GWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFV
                     RNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAG
                     ESFRLSSTGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGEF
                     KYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLE
                     QLQVMMNVTHKLRAELAK"
     gene            complement(14656..15534)
                     /gene="metF"
                     /locus_tag="WJJ54_000688"
     CDS             complement(14656..15534)
                     /gene="metF"
                     /locus_tag="WJJ54_000688"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEZ7341580.1"
                     /translation="MNYAKEINALNNSLSDLKGDINVSFEFFPPKNEQMETMLWDSIH
                     RLQTLHPKFVSVTYGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASPDELRQIAK
                     DYWDSGIRRIVALRGDEPAGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSA
                     QADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQL
                     GKMAQVTNVKIPSWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLN
                     RSELTYAICHILGVRP"
     gene            15734..16009
                     /locus_tag="WJJ54_000689"
     CDS             15734..16009
                     /locus_tag="WJJ54_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HEZ7341581.1"
                     /translation="MKPNIHPDNYRTVLFFDSSANEGWLIRSCAETHGKTMVWTDGKE
                     YPLFSLDTSSASHPVYTGKQRNVNTEGRASKFNQRFQSVMSSFRKDK"
     gene            16009..16134
                     /gene="ykgO"
                     /locus_tag="WJJ54_000690"
     CDS             16009..16134
                     /gene="ykgO"
                     /locus_tag="WJJ54_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HEZ7341582.1"
                     /translation="MQVLSSLKTAKQRHRDCQIVRRRGKVYVICKSNPRFKARQR"
BASE COUNT         3995 a         4062 c         3982 g         4117 t
ORIGIN      
        1 aattcagacg gccttttcat taacaaataa aaggccgtct gaaacgatta cagatccaac
       61 aacaggcggg ccgggtcttc caacgcgtct ttaatggcta ccaaggtcaa tacagcttcg
      121 cgaccgtcga tgatacggtg gtcgtaagac agagccagat acatcattgg acggacaaca
      181 acttgaccgt tttcaaccac agcgcgctct ttagtggcat gcatacccaa aatcgcagat
      241 tgaggcgggt tgatgatcgg ggtagacatc atagaaccga aagtaccgcc gttggtaata
      301 ctgaatgtac cgccggtcag atcttcgata gcgattttgc catctttggc ttttttcgcg
      361 taatcaacaa ttgcttgttc gatgtcggca atgctcattt ggtcggcatc gcgcaggatt
      421 ggcacaacca aaccgcgtgg gctgccaatc gcgataccga tgtcgaagta gccgtggtac
      481 acgatgtctt tgccgtcaac agaagcattc acaaccgggt attttttcag ggcggcgaca
      541 gcggctttaa cgaagaagga cataaagccc aatttcacgc cgtgttcttt ctcgaatttt
      601 tctttgtact tcgcacgcaa gtccatgatt ggtttcatgt tgacttcgtt gaatgtagtc
      661 agaatggcgt tttcttgttg agaagccaag aggcgttctg caacacgggc acgcaggcgg
      721 ctcattggta cgcgttcttc aggacgtgcg ccggcagggg ctgcggctgc ggcaggtttg
      781 gcagcggcat tttgtacgtc ttctttcaat acgcgaccgt cacggccgga accttgcaat
      841 gcgttcacgt caacaccgct ctctgcagcc agtttggcgg cggcaggcat agcggcgttg
      901 ttttgtgcag cagcaggagc ggcggccggg gcagcttcgg caggagcggc ggcaggtgct
      961 tcagcagcgg cagtagcagc ggtatcgata cgtgccaaaa cttggtcggc aacaacggtt
     1021 tcaccgtctt gcgctacgat ttcaaccaat acgccggctt gtggagaagg tacttccaaa
     1081 accactttgt ccgtttcgat atcgatcagg atttcgtcac gggcaactgc ttcgccaact
     1141 tttttcttcc attccaagag cgtgccttca gatacgcttt cagacagcat aggtactttt
     1201 acatcaataa tcattttgtg tctccaatgg ccctttcaga cggcctgttg tgtgtttttc
     1261 attctgcata tgggtgttcc gcctgagcag cctcagacgg aatgctactt ggcttacaat
     1321 gccaaagcgt cttcaaccaa ttgtttcaat tgagcaatgt gtttgcttga gtagcccact
     1381 gcaggcgatg cgctgcttgg acgaccggca taagacagtt tttgctcttc gctgataacg
     1441 tcttcgatgc ggtggcggat ttggtagaac gcgccttggt ttttcggctc ttcttgtgcc
     1501 caaaccacag atcttgcgtt cggatatttc gccagttcgg ctttaacctc gtcgtatggg
     1561 aacggataca gctgctcaac gcggacaata gcgacatcat cttccagttt acgttcggct
     1621 cgaccggctt ccaagtcata gtaaacctga ccggcacaca ataccacgcg tttcacgctg
     1681 tcgttgcttg cgcgttcggc ggtatcgccg ataactggac ggaaagtcga accttcggtg
     1741 aagttttcca gcgggctcat tgcccctttg aatcgcaaca ggcgtttgga catgaaaatt
     1801 accagcggtt tgcggtatga acctaagact tgacgttgca agaggtggaa catttgcgac
     1861 gcttcagacg gcatgatgac ttgcatattg ttctcagaac acagttgcaa ccaacgttct
     1921 acgcgtgcag aagagtgctc gggaccttga ccgtcgtagc cgtgcggaag gatggtggtc
     1981 agaccacaca aacgacccca tttggtttcg cctgaagaca ggaattggtc aatagtcact
     2041 tgcgcgccgt tggcgaagtc accaaattga gcttcccaaa tggtcagctt gtcaggcgcg
     2101 gagcaggcaa agccgtactc gaacgccatc acggcttctt cgttcaaaat ggagtcgata
     2161 accaagaact cgcccatacc ttcgcccata tggcgcagag gaacataagt accgtcatcc
     2221 catttttcac gtttttgatc gtgcaatact gcatgacggt gtgagaatgt accgcgcccg
     2281 gagtcctcac cggagatacg cacgccatga cctttggtta caaggcttgc gtatgccaag
     2341 gtttcggcca taccccagtc gatggcttgt ttgccggatg ccatggcttt acgcgcttca
     2401 atcacacgtt ttgcagtcgg atgcagggca aagccttccg gtacggcggt aaatttctcg
     2461 gtaagacgct caatatccgc ggcaggcaaa ccggtttcga tgtgttcgcg ccaatcttta
     2521 ccttggtatt tgctccagtc aatttgtgtg cgttggaagt tgctcaacgt tgtttgctcg
     2581 acgtgttcgc ctttatccaa agcatcacgg taggcttgga tgtaaccgtc agcctcggct
     2641 tgggttacca cgccttcggc aatcagttgc tcggtgtaca aagcacgcgc acccaggtgt
     2701 tgcgatactt ttttgtacat catcggttgg gtcaaggtcg gatcgtcgcc ctcgttgtgg
     2761 ccccatttac ggtagcagac aacgtcgatc acgatgtctt tatggaattt tttgcggtaa
     2821 tccaaagcgg cttggatggc aaagcaaaca cgctcaggat catcgccgtt cacatggata
     2881 accggagcgg aaaccatttt tgcgatatcg gtacagtgta cggttgaacg ggtatcgcgg
     2941 atatcggaag tggtaaagcc gatttgattg ttgatgacga tatgaaccgt accgccggtg
     3001 gtataaccgc gcgttttaga caggttgaat gtcgcttggt tgacacccaa accgataaat
     3061 gcggagtcgc cgtgaatcaa tacgggcaag actttatcgc ggccgttttc gcccaaacgt
     3121 ttttgcttgg cgcgtgcaga accttccact accggattga cgatttccaa gtgggacggg
     3181 ttgaacgcca aagaaacatg catcgggccg tgcggggtag caatatcgga gctgaagccc
     3241 atatggtatt tcacgtcgcc gctgggcagt ttgatttcgg cacgaccttc aaattcggca
     3301 aacaaatcgc cgggtttttt gcccaaaatg ttcaccaaaa cattcagacg gccacggtgc
     3361 gccataccga tgatgacttc ttccacgccg tctttaccgg cgttttgaat caggtagttc
     3421 aaaccggcaa tcgcgctttc gccgccttcg acaccgaaac gtttctgacc gacatatttg
     3481 gtatgcagat aacgttccaa agtctcggca gcagtcatct ctttcaagat acggcgtttt
     3541 tgatcggcat tgtaatgcgg tgtggacaat acgctttcaa aataattgcg tacccagcgg
     3601 cgctcttcgg tattgggaat atagatatat tccaatgcga tgtggccgca gtaggtttgt
     3661 ttgaggttgc tgatgatttg ggacaaaggc agtttgccgc gattggcaaa atcgccctcg
     3721 cccatattga attgaagcgc catatcggca tcagacagac cgtggaattt cggatcgagg
     3781 gcttcaatat cgcgcggggg gatacgtttg agcggatcaa gttgggctgc acccacgcct
     3841 tggatacgat aggcagaaat cagccgtaaa acgctgactt gctttttcag cattgcctca
     3901 tccgcaccgc ccgcaacggc agatgcaatt ttctttttcg ccaaagtaac aaatgattcg
     3961 cgaatcggtg tgtgtgcgac atcgacagca accgtccccg gctgtttgct caaatcggtg
     4021 aaatactgct tccatttttc atcaaccgta tcggggtttt ccaaaaaagc ctcgtacaat
     4081 tcctcaatgt agggtgcgtt cgaaccgaac aggtaagaga aattgagttt ttcgtccatc
     4141 atggcgtgcg ctcttttctt taaaatataa acaaagggta gaagtccgcg tcctgacggc
     4201 taaactgatg ccgtctgaaa agacatttta ttctacccta ttttaaaccg gattgcttgt
     4261 cttgatttca tccgactaca atcagacgga ttcgggaaac aatccggttc tctgatattg
     4321 cctgtttgac aatatattaa tgtatgttac ctctcgcctg gcggcacata atcgcggcgt
     4381 tccgaaccgg tataaagctg gcgcgggcgg ccgattttca gcgaaggatc gctaatcatc
     4441 tcgtgccagt gcgaaatcca acctacactg cgcgacaggg cgaagatgac ggtaaacatt
     4501 tcggtcggga tgcccagcgc ggacaggacg atgccggaat agaaatcgac gtttggatac
     4561 agtttgcgtt cgataaagaa cgggtctttc agcgcaatct gttccaattc catcgccagt
     4621 ttgaatttcg gactgtcttc caagcccaat tccttcaaaa cttcatagca ggtttcgcgc
     4681 ataatgctgg cacgcggatc catattgcgg tacacgcggt gaccgaagcc catcagacgg
     4741 tatttgcgtt gtttcacacc ttccatgtat gcggcaacat tagacacatc gccgatttcg
     4801 tccaacattt tcaacacggc ttcgttcgca ccgccgtgcg aagcacccca caggcaggcg
     4861 ataccggcag caatacaggc aaacgggttc gcacccgaag accctgccag acggacggtt
     4921 gaagttgagg cgttttgctc gtggtcggca tgcaaaataa agatgcggtc gagcgcgcgt
     4981 gccaaaacgg gattgggttt gtagtcttca cacggcgtgg cgaacatcat atgaaggaag
     5041 ttttcggaat aagaaagatt attcttcgga taattgaacg gcagaccgtt tgaatagcgg
     5101 tagcacattg ccgcaatggt cgggatttta gaaatcaggc ggtaaatcgc gattttgcgg
     5161 tgttcgggat tgctaatgtc caagctgtct tggtagaacg cagacagtgc gccgaccacg
     5221 ccgaccatca tcgccatcgg atgcgcgtcg cggcggaacc cccggaagaa ccaagtcagc
     5281 tgttcatgca ccatcgtgtg gcggcggacg gtattgtcaa attctgcctt ttgctcggga
     5341 gtcggcagtt cgccgtaaat caacaggtag cagacttcca aataatcgga cttttcggcc
     5401 agctgctcga tggggtatcc gcgataataa agcaagcctt gatcgccgtc gatgtaagta
     5461 attttagact cacagcttgc ggttgaaaca aatccggggt cgaaggaaaa caaacctgta
     5521 ttttttgtca gcccccgaat gtcaaccaca tcgtgcccga tgctggcttc caataccggc
     5581 agctccaaac ctgcctgacc cggtacgttg agtttgattg atttggacat attattgctc
     5641 ctttgcaagt tataacccac gttactgcat ccgcagcacg ttctttgcct tcagacggct
     5701 tttgcatttt gaaatctgcc tgcaggcaga tttcagatgc ctcatgcccg tctgattttt
     5761 tcaagcatcg ggataaggtg ccctttgtcc gtttccgaat gcccgttaat caaggcaagc
     5821 aattcttgat cttgaaattc aaggatttcg gaaaactcgg acagctcttt atcgctcaaa
     5881 tgctcgaatt ctttttccat aaacctgccg aagattaaat ctaattccaa caatccccgg
     5941 cgggtttgaa aacggatttt ccgtttggca atatcgtcaa aaaccatcat ttcttaaacg
     6001 gcccgtttca acataatctc tttaatctta ccgatggctc gggtcggatt caagtgttta
     6061 ggacatacgt ctatgcagtt cataatggtg tggcaacgga acaaacggta tgggtcgttc
     6121 agattatcca aacgctcatt agtgatggta tcacggctgt ccgcaatgaa acggtaagca
     6181 ttcagcaaac cggacggacc aacgaattta tcagggttcc accaaaatga cgggcaggca
     6241 gtcgaacagc aggcgcacaa aatacactcg tacaaaccgt ccaactcttt acgctcttcc
     6301 tgagtttgca gacgctcttt gtccgcatca atcggattat cgttgacaac ataaggtttg
     6361 acggaatggt attgtttgaa gaactgggtc atatccacaa tcaggtcgcg gataacaggc
     6421 agacctggca gaggacggat tttaactggc tgtttcaagc cacgcagatc ggtcaaacac
     6481 gccaagccgt ttttgccgtt gatgttcata ccgtccgatc cgcaaatgcc ttcgcggcag
     6541 gagcggcgga aagacaaggt atcgtcttgt gctttcaggc gtaccaaagc atccaaaagt
     6601 ttcacgtcgg tcggttccaa ttccaactcg taacgctgca tataaggctt ggcatcaaca
     6661 tccgggttgt aacggtaaat ttcaaaactc attttttcca tgagaagtgt tccttttctc
     6721 atcaactgcc caatgatttt gtattataaa ttcaagcagt tcaatgtggg tatggttaga
     6781 tttcagacga cctttgaggc gaagaccgtc tgaaaacgca tcaataaacg cgcttggccg
     6841 gtttgatgta ttccacgctc aaaggcttgg tgtgcaccgg tttgtaggac aaggtattgg
     6901 tatctgaatg gtacagcgta tgtttcatcc agttttcatc atctcgctca ggatggtcgt
     6961 ctgaagcgtg cgcaccgcgt gattctttac gtgcttcggc agacaccaaa gtcgctttcg
     7021 ccacttcaat caggttatcc aattccaaag cctcgatacg cgcggtattc cacactttgc
     7081 tcttgtcttt gatttcggta cgtttcacac gctcggcaat cgccatgact tctcgaacgc
     7141 ctttgctcag aatctcatca gtacggaaca cgccggcgtg cagttgtacg gagcgttgca
     7201 attcgcggcg caatgcatca acgttttcgc catcagtttg attgtccaaa cgctcgatac
     7261 gttggcgggt cagctcgccc gcatccgcag gcaaaggttt ccagtcgctt tgctctttga
     7321 tgaatttaat catgctgtcg ccggcagctt taccgaatac caccaagtcc aacagggagt
     7381 tggtacccaa gcggttcgca ccgtgtacgg aagcacaagc gcactcacct gccgcataca
     7441 gaccttttac aggcacttcg tattcgtcgc cttgaggaac gacaacttcg ccatggtagt
     7501 tggtcggaat accgcccatc atatagtggg tagtcggcac aacgggaatc gggtctttaa
     7561 tcggatcgat accggcgaac tgaatggaaa tctcgcggat gcccggcagt ttttccataa
     7621 ttttttctgc gccgatatgg tcgattttca gtaagacatg gtctttgttt ttaccgcagc
     7681 cgcgaccttc gtagatttcc atcgccatcg cgcgggaaac aacgtcgcga gaagccaagt
     7741 cttttacggt cggcgcatag cgttccataa agcgttcgcc gtcggcattc aacagaatac
     7801 cgccctcgcc gcgtacgcct tcggtaatca acacgcccgc acctgccacg ccggtcgggt
     7861 ggaattgcca gaattccatg tcttccaacg ggatacctgc acgcgcacaa atacccaaac
     7921 catcgccggt attcatatag gcattggtag aagacgcata aatacggccg ccgccgccgg
     7981 tagcaaacat cacagcttta gcgtggaaaa tataaacttc gccggtttcc atttccatgg
     8041 cggttacgcc gacgacatcg ccgttttcat cacgaatcaa atcttgtgcc gtccattcca
     8101 caaagaattg cgtattggca cggacatttt gttggtacaa agtatgcagc atcgcatgac
     8161 ctgtacggtc ggcaaccgca caggcgcgtt ctaccgcgcg tttaccgtgt tcggcagtat
     8221 ggccgccgaa aggacgctga taaattttac cgctttccac acggtcaaaa ggcataccca
     8281 tgtgttccaa ctcaattacg gcttcaggcg cggcgcggca cataaactca atcgcatctt
     8341 ggtcgcccaa ccagtcggaa cctttcacgg tatcgtacat gtgccagtcc caacggtctt
     8401 cctgcacatt acccagagag gcggaaatac cgccctgcgc cgctacggta tgcgaacggg
     8461 tcgggaacac tttagacaaa acggcacaat tcagaccgga tttggataat tggagggctg
     8521 cgcgtaaacc tgcaccacca ccgccgacaa tcacggcatc aaacttgcga acaggaaaac
     8581 ccatacttac ccccaaatta ctttaattga atacaccaag cagccgacca gccagacgat
     8641 ggtggcaacc tgcaaaaaca aacgcacgcc gaagggtttg atatagtcca tccacaaatc
     8701 gcggataccc acccaagcgt gcaagaatac ggcgatgaag ctcacttggg taaatacttt
     8761 tacccaagtt tgactaaaaa atgcctgcca tgccgaatat tctttaggca gagcaaatag
     8821 aaccactaaa agtgcaacgg tataaatcaa cataataacc gcggtcgcac gttgcatcgc
     8881 ccaatcccgc aaaccgtaat gggcaccggt caatttacgt tctaccataa caacgctccc
     8941 aaaacgacag tcaaaaccaa tgcagaagca aatacggctt tagcggtatt gcgcgcagta
     9001 ttcagctcaa ggcctttgtg cgcatccaaa aataaaaagc ggataccggc gagagaatgg
     9061 tgcagataag cccacaatac accgattaaa accagcttga ccaaaggatg ggaaacaatg
     9121 gcacggtaag tttcaaatgc agactcttga ctcagggtac cggacaggaa atacagcagg
     9181 aaaggcagca taataaacag cccgaccccg ctgatgcggt gaaggatgga aactatcccg
     9241 ggtatcggca gacggatgtt cggcaaatcc agataaacag gacgcggttt ggcagacata
     9301 gtcaattcct ctgtagttat atatcgactc aaaaaccgta aacccattgc tacactgggt
     9361 tacataaacg ttaatttacc tgttttatcc cattttgaac agtgtatttt aaaaacaaac
     9421 tgatagattt tgacaaacac gcgtggaaac agcagattaa aagaaagatt tttagttttg
     9481 ccgccccctt cccgacacgg tatcagcatc cgaccccatc cccaaaaaca aaatgccgtc
     9541 tgaaaaaatt tcagacggca ttgttttgcc atatcggtca ggctttcaat ttcgcatcgg
     9601 catcgcgcaa cgcggtacgc aaaccttcct cgataacggg atggtagaac ggcatatcca
     9661 gcatttgcgg aacggtcatc ttcatttgat gtgcccaagc caacaggtgc gccaaatgtt
     9721 cggcggccgg acctacgatt tctgcgccga tgaagcggct ggtggctttt tcggcataca
     9781 ggcgcatatg gcctttgttt accagcatca cgcggctgcg gccttggttt ttgaacgata
     9841 cttcgccgat gacaaattcg tcggcttggt attgcgcggc aacctgcgcg tatttcaaac
     9901 cgacaaagcc gatttgcgga ctggtgaaca ctacgccgat ggtgctgcgg cgcaaaccgc
     9961 cgccgatatt cgggtagcgg cctgcgttat cgccggcaat cttgccttgg tcggcggctt
    10021 catgcagcag gggcagttgg ttggacgcgt cgcccgcaat aaagatatgc ggaatactgg
    10081 tctgcatagt cagcggatcg gcaacgggta cgccgcgcgc atctttttcg atattgatgt
    10141 tttccaaacc gatattgtca acgttcggac ggcggcctac ggctgccagc atatattcgg
    10201 caacaaatac gcctttttcg ccatcctgct cccaatggac ttctacattg ccgtctgcgt
    10261 cgagtttggc ctcggtttta gcatccaaat gcagtttcaa ttcttcaccg aacacggctt
    10321 tcgcctcgtc tgaaacgacg gggtcggaaa tgccgccgat gatgccaccc aaaccgaaaa
    10381 tttcaacttt cacgcccaaa cggtgcaatg cctgacccag ttccaaaccg ataacacccg
    10441 gcccgaacac ggcaacgcgc ttaggcagcg tatcccatga gaaaacgtca tcgttgataa
    10501 tcaaacgatt gcccaaagac tgccattgcg gcaggatgac gggacgcgaa ccggtagcaa
    10561 tcacgaaact ttttgccgta atttgagtat gctcgtcgat ttggacggta tgctcgtcga
    10621 taaatttagc cgaacccata atgcgcttgt cggcaggcca ctcttccaca tcggcaacga
    10681 caaagccgac aaaacggtca cgctcggatt taacgcgctg catgacctct tcaccgttga
    10741 cgacgatgct gtctttgtcc aaatgcacgc cgaacgggtc ggtatgcaat gcgtggtggc
    10801 gcgcctctgc ggcggcaatc aagagtttgg aaggcataca acccacgcgc gcgcaggttg
    10861 tgccgaacac attgttttca atcaggtaaa cattatccga atgtaaacgg gcattgcgaa
    10921 acgcacccat accggcagta ccgccgccga gtacgacgac atccgcttga atttttttca
    10981 taatctttgt ccttccgttt tcgtctgaaa cattgccgac acagaacata tcggtttcag
    11041 acggcattta aatattttcc caatcaaaaa catcattcag ataaataaaa acaaaatttc
    11101 gattgagtgc aacaatatcc aaattctctt ataaatatag agttattcgg agcggcagtg
    11161 tagaaccgcc cgaataactc tatccggtat atcagacagt ttaatcaaac cgccttaagc
    11221 aaacagctat cagtttttag ccaagtaagc ttccaaatct tcgctgccgc cgatgtattt
    11281 accgccgatg aagacttgag gagcagtcat cttgccggta atggcgcgta cagaagtaac
    11341 ggttgcatct ttgcccaata cgatttcttc gtatgacaaa cccttgtctt gcaaagcttg
    11401 tttggctttg gcgcagaatt gacaacctgg tttagtgaaa attgccacag actcttgagc
    11461 cttccaatca ggagcaacga atttcagcat agtatctgca tcggatactt tgaacggatc
    11521 gcccggttct tcaggctcga tgaacatttt ttcaaccacg ccgtcgttaa ccagcatgga
    11581 gtaacgccaa gagcgtttgc cgaagcccaa gtcttcttta ccgaccaaca tacccatgcc
    11641 ttcggtaaat tcgccgttgc catcaggaat catgtagatg ttgtcagatt cttcttcggc
    11701 agcccaagcg ttcattacga aagtatcgtt tacagatacg cagtagattg catcaacgcc
    11761 gttttctttg aacgcgccga acaattcatt gtaacgtggc aaatgggaag aagagcaagt
    11821 cggagtaaat gcgccaggca gagagaatac gactactttt ttgcctttga acaaatcatc
    11881 ggtagacaca tctttccaag tgtcgccgac gcgggtgcgg aatactacgg aaggtacttt
    11941 ttgaccggta cgatcttgca aagccatttt gagctcctta atagataggt ttaagaaatg
    12001 attgtgaatc gctgggcatt ctaccccgaa taagtcgatt tgtataattt atagttcaaa
    12061 taatattaat tattcaaaac tattaattac caacctcgac caacttcttg cagtatataa
    12121 agccatgcct aaaaaaaaca agtcttattt gagaaaaatt cttagaaact cccctacgct
    12181 catttgaaaa cagaaatgcc gtctgaaaag tattcagacg gcatctgatc acgttatccc
    12241 tgcttattta gccagttcgg cacgcagttt gtgggttacg ttcatcatca cttggagttg
    12301 ttccagagtt tctttccagc cacgtgtttt caggccgcag tctgggttaa cccacagacg
    12361 ttcaaccggt acaacctcga tggctttgcg caacagatgt tccacttcag cttcagtcgg
    12421 tacgcgcggg ctgtggatgt cgtaaacgcc cgggccgatg tcgttcgggt atttgaattc
    12481 gccgaacgcg gtcaagagtt ccatgtcgga acgtgaagtt tcgatggtga tgacgtccgc
    12541 atccattgca gcaatcgcag gcaggatgtc gttgaactca gagtagcaca tatgggtgtg
    12601 gatttgagtg ctgtcttcgc aaccagtaga ggacaggcgg aaggattcgc cagcccagtt
    12661 caggtaggca tcccaatcgg cacgtttcaa aggcaggcct tcgcggatgg caggttcgtc
    12721 gatttggatg actttgatgc cggctttttc cagatccaat acttcgtcgt tcagggccag
    12781 tgcgatttgt ttgcatacag tagagcgagg aatatcgttg cggacaaaag accattgcag
    12841 aatggttaca gggccggtca acatgccttt catcgggcgt ttggtcaggc tttgtgcgta
    12901 agtagaccaa gctacggtca tggcttcagg acggcttacg tcaccaaaga tgatcggtgg
    12961 tttaacgcag cgtgagccgt agctttgtac ccagccgtat tgggtgaatg caaaaccgct
    13021 caacaattcg ccgaagtatt caaccatgtc gttacgctcg gcttcgccgt gtaccagtac
    13081 gtccaagtcc agtttttctt gctcttcaac caccaaggcg atttcttttt tcatcgcggc
    13141 ttcgtaatcg gcggcagaca gttcgccttt tttgaaggcg gcgcgtgcct ggcggatttc
    13201 ggtagtttgc gggaaagaac cgatgttggt agtcggcagc agaggcaggt tcaaccatgc
    13261 ttgttgcgct ttgatacgat cggcaaatgg agatttgcgt tggtctgcgt tggcaggcaa
    13321 atcagccagg cgtttggcaa cgtctgcacg gtggatttcg ctgctgttgg cacgagaatc
    13381 ggcagcagct tggctagcgg ccagttcttc ggcaacggaa tcacggcctt catttaatgc
    13441 ggctttcaga acgcgcaatt cttgggtttt ttgcagggta aatgccaacc aagagtacaa
    13501 gtcgggtttg ttggctttca gtttttcttc aactgacaag tcaaatggag tgtgcagcag
    13561 agagcaagag ctggaaatcc acaaacggtc gcccagtttg gcttgcagag gctcaacagt
    13621 ttccaaaact ttgttcaggt tggcgcgcca aatgttgcga ccatcaatca cgccggcaga
    13681 caggactttg tcatagtcgg cgaacgcgtc cagttgctcg ggagcgcgta ccaagtcgat
    13741 gtgcaggccg tcaacaggca gggatttcaa caatgcggcg tgttcggcaa cagaaccaaa
    13801 gtaagtgctc aacaggattt tggcacttac tttgttcaaa gtggcgtaaa cgtctttgta
    13861 tgcttctacc cattctttag gcaggtcaac agtcaaagca ggctcgtcga tttgaatcca
    13921 ctcggcaccg gcttcaacca aagcagtcag gatttcaacg taaacaggca gcagtttagg
    13981 caacaggctc aggcggtcga attcgactgc gcctttttct ttacccaccc ataggaaggt
    14041 cagcggaccg acgatggtcg gtttggcttt caggcccaaa gcttgggctt cttgcaactg
    14101 ttgaacgtaa tgtttggcgt tggctttgaa ttcggtatcg gcgtggaatt caggcaccaa
    14161 gtagtggtag ttggtgtcga accatttggt catttcgata gcaaattggt ctttgttacc
    14221 acgcgccagt tggaagaatt gttccaaaga caggttttgg ctgtcgaagc cgaagcgggc
    14281 agggatggca ccggtagcaa cttgcaggtc gaggatgtga tcgtagaaag tgaaatcgcc
    14341 tacagcaacg taatcagcgt tggcagcagc ttcgtgtttc cagtttttct cgcgcaagtc
    14401 tttagcaaca gccagcaatt cttgctcgct gatttctttg cgccagtatt tttcttgtgc
    14461 gaatttcaat tcgcggaagg cgccgacacg cgggaagcct gagaaatgta atgttgtcat
    14521 gttgaactct ccagttggat tttgtaagga ccggttcaat ccgaatcggc cggtattgta
    14581 aatcagaatg gctcggatgg ggcggcgttt tgcttttcag acggccctgg atgccgtctg
    14641 aagccgtttt cggctttaag ggcgcacacc taaaatatgg cagatggcgt aagtcagctc
    14701 gctgcggtta agcgtataga agtggaaatc tttcacgcct tcgcgggaca ggactttgac
    14761 catatcgatg gcgatacttg ccgccaccag attgcgcgta ccttggtcgt cgtccaaacc
    14821 ttcatacatt tgcgacagcc agcttgggat tttgacgttg gttacttgag ccattttacc
    14881 gagctgcttg aagttggtaa caggcaaaat accggggacg atttccacat cgatacccaa
    14941 catcacgcag cggtcgcgga agcgcaggta gcgttccaca tcgaagaaga attgggtgat
    15001 gacgtggttc gcgcccgcat cgattttgcg tttcaaatta atcaggtcgg cttgtgcgga
    15061 tttcgcttcg ggatgcactt cgggatatgc tgctacagag atgtcgaagt cggcgacgga
    15121 gcgtaatagc ttaaccaagt cttcggcgta aaacggtttt ttctcataac cggccggctc
    15181 gtctccgcgc agggcgacaa tgcggcggat gccgctgtcc caataatctt tggcaatttg
    15241 gcgcaattcg tcgggagaag cgtcgatacc ggtcaggtgc ggcgcggctt ccaagccggt
    15301 ttcctgtttg atgcgtttga cgatgccgtg cgtgcggtcg cgttcgccgg aatttgcgcc
    15361 gtaagttacg gatacgaact tgggatgcag ggtttgcaga cggtggatgg agtcccacag
    15421 catcgtttcc atttgttcgt ttttcggcgg gaaaaattca aacgaaacgt taatgtcgcc
    15481 tttcaaatca gaaagactgt tatttaacgc attgatttct tttgcgtaat tcatggctgc
    15541 gtacctttta ttatctttta tatgatgttt caggcaacat aataaagttg cgccaaacat
    15601 gagtcaattt caaaattttc agatttatca tgaaaatttc taatatatta caaaaatagt
    15661 taaatttcct tgtacaagcc ttctaattta tgataaagtt tgttatgtta taacaattca
    15721 actaaggcga tatatgaaac cgaatattca tcctgacaat tatcgaaccg tccttttttt
    15781 cgacagcagc gccaatgaag gctggttgat tcgttcttgc gccgaaacac acggaaaaac
    15841 gatggtttgg acagacggca aagaatatcc gctgttttcg ctggatactt cttccgcatc
    15901 ccatcccgtc tatactggca aacagcgcaa cgtcaacacc gaaggccgtg ccagcaaatt
    15961 caaccaacgt ttccaatccg tcatgtcatc gtttagaaag gacaaataat gcaggttctg
    16021 tcttcactca aaaccgccaa acaacgccac cgcgactgcc aaatcgtcag acgcaggggc
    16081 aaagtttacg tcatctgcaa aagcaatccg cgttttaaag cacgccaacg ctgactccct
    16141 gcccttcctg cttcgg
//
LOCUS       DAWKJW010000029        15761 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.029, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000029 DAWKJW010000000
VERSION     DAWKJW010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15761)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15761)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15761
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.029"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(115..1440)
                     /locus_tag="WJJ54_000691"
     CDS             complement(115..1440)
                     /locus_tag="WJJ54_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HEZ7341583.1"
                     /translation="MKKYLFRAALYGISAAILAACQSKSIQTFPQPDTSVINGPDRPA
                     GIPDPAGTTVAGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCA
                     QAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIY
                     GIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNAGGTHTADLSRFPITARTTAIK
                     GRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIR
                     IGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFF
                     RELTGSSNDGPVGALGTPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQ
                     DTGSAIKGAVRVDYFWGYGDEAGETAGKMKEPGYVWQLLPNGMKPEYRP"
     gene            1651..2490
                     /locus_tag="WJJ54_000692"
     CDS             1651..2490
                     /locus_tag="WJJ54_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HEZ7341584.1"
                     /translation="MLVAFLIMLREGIEAALIVGIVAGFLKQSGHSKLMPKVWFGVVL
                     ASLMCLGLGYGIHSATGEIPQKQQEFVVGIIGLVAVAMLTYMILWMKKAARSMKRQLQ
                     DSVQAALNRGSGQGWALVGMAFLAVAREGLESVFFLLAVFKQSPTWQMPAGAVAGVLA
                     AAVIGALIYQGGMRLNLAKFFRWTGAFLIIVAAGLLAGSLRALHEAGIWNALQDIVFD
                     SSKYLHEDSPLGVLLGGFFGYTDHPTQGEALVWLLYLIPVITWFLCGSRPSETLTRKE
                     ELK"
     gene            2487..3653
                     /locus_tag="WJJ54_000693"
     CDS             2487..3653
                     /locus_tag="WJJ54_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HEZ7341585.1"
                     /translation="MRKFNLTALSVMLALGLTACQPPEAEKAAPAASSEAQTANEGGS
                     VSIAVNDNACEPMELTVPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDK
                     MTVTLLPGEYEMTCGLLTNPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEV
                     KELVAKTKTFTEAVKAGDIEKAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFK
                     DGAKDAGFTGFHRIEYALWVEKDVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGG
                     ASELIEEVAGSKISGEEDRYSHTDLSDFQANVDGSKKIVDLFRPLIEAKNKALLEKTD
                     TNFKQVNEILAKYRTKDGFETYDKLGEADRKALQASINALAEDLAQLRGILGLK"
     gene            3917..5182
                     /gene="efeB"
                     /locus_tag="WJJ54_000694"
     CDS             3917..5182
                     /gene="efeB"
                     /locus_tag="WJJ54_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HEZ7341586.1"
                     /translation="MSKNQPAQPTRRTLFKTAIAAGAVGAIGGYLGGKKQGETAERTA
                     ESQHSPQAYPCYGEHQAGIVTPQQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQ
                     GGEYQDGDDKLPPAGSGILGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKPIHLQEMRD
                     FSNDKLQKSWCDGDLSLQICAFTPETCQAALRDIIKHTVQTAVIRWSIDGWQPKSEPG
                     AMAARNLLGFRDGTGNPKVSDPKTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRHF
                     VEFWDRTPLQEQTDIFGRRKYSGAPMDGKKEADQPDFAKDPEGDITPKDSHIRLANPR
                     DPEFLKKHRLFRRAYSYSRGLASSGQLDVGLVFVCYQANLADGFIFVQNLLNGEPLEE
                     YISPFGGGYFFVLPGVEKGGFLGQGLLGV"
     gene            complement(5251..5583)
                     /locus_tag="WJJ54_000695"
     CDS             complement(5251..5583)
                     /locus_tag="WJJ54_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HEZ7341587.1"
                     /translation="MSLPPCPQCASEYTYEDGGQYICPECAHEWNKTESAAAEAAEEV
                     RDANGAVLQNGDTIILIKDLKVKGSSMTIKQGTKVKGIRLQEGDHNIACKIDGSAMNL
                     KSEFVKKA"
     gene            complement(5658..7028)
                     /gene="glmU"
                     /locus_tag="WJJ54_000696"
     CDS             complement(5658..7028)
                     /gene="glmU"
                     /locus_tag="WJJ54_000696"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEZ7341588.1"
                     /translation="MPQNTLNIVILAAGKGTRMYSKMPKVLHRIGGKPMLGRVIDTAA
                     ALNPQNICVVIGHGKDQVLNAVKRDVVWVEQTEQLGTGHAVKTALPHLAAEGRTLVLY
                     GDVPLIDVETLETLLEAAGNEVGLLTDVPADPSGLGRIIRDGSGSVTAIVEEKDADAA
                     QKAVKEINTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVRA
                     SHLAAGVNNKRQLAELERIFQTGQAQELLKAGVTLHDPARFDLRGRLKHGQDVVIDVN
                     CIFEGEIELGDNVEIGANCVIKNAKIGANSKIAPFSHLEDCEVGENNRIGPYARLRPQ
                     ARLADDVHIGNFVEVKNAAIGNGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKH
                     KTVIGDEVRIGSNCVLVSPVKIGNKVTTGAGSTITRNVEDNKLALARARQTVIEGWVR
                     PEKDKQ"
     gene            complement(7083..7355)
                     /locus_tag="WJJ54_000697"
     CDS             complement(7083..7355)
                     /locus_tag="WJJ54_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore cortex protein"
                     /protein_id="HEZ7341589.1"
                     /translation="MRKTFLILMTAAALLSGCAWETYQDGNGKTAVRQKYPAGTPVYY
                     QDGSYSKNMNYNQYRPERHAVLPDQTDDSEQGVRGQNWQKPKFQNR"
     gene            complement(7348..8061)
                     /locus_tag="WJJ54_000698"
     CDS             complement(7348..8061)
                     /locus_tag="WJJ54_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HEZ7341590.1"
                     /translation="MQENPTVRLFDLDNTLHNADAGIFHLINRAMTRYMAHRLKLSES
                     AASDLRQEYWHRYGATLAGLQIHHPEIDIADFLRESHPIDAILTRLHGMPETQNTLSR
                     LKGRKAVFSNGPSFYVRAVVGALGLENRFDALFGTDDFGLLYKPNPQAYLNVCRLLDV
                     PPECCIMVDDSADNLHQAKALGMKTVWFGAKSHALPFIDASVSDMAQLARYAETLSEH
                     RQNHYNTRTTPENTKECYA"
     gene            8120..9121
                     /locus_tag="WJJ54_000699"
     CDS             8120..9121
                     /locus_tag="WJJ54_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ7341591.1"
                     /translation="MKRKIWLLPLLAVSAYLQAQTEVRLAVHKSFSLPKGLIARFERA
                     NDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAP
                     VAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSP
                     GLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAA
                     SPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV
                     QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK"
     gene            9215..10063
                     /locus_tag="WJJ54_000700"
     CDS             9215..10063
                     /locus_tag="WJJ54_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEZ7341592.1"
                     /translation="MDFKQFDFLHLISVSGWEHLAEKAWAFGLNLAAALLIFLVGKWA
                     AKRIVAVMRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGG
                     AGLAVALSLKDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDN
                     EEVVLPNSVVMGNSIVNRSTLPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQN
                     EERQAAAYITALGDNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRD
                     IHIINS"
     gene            10089..10574
                     /locus_tag="WJJ54_000701"
     CDS             10089..10574
                     /locus_tag="WJJ54_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEZ7341593.1"
                     /translation="MDALHTIARNLTKKRQTVSCAESCTGGLLAAVFTSVAGSSQWFD
                     QSFVTYSNKAKEDRLGVLPETLLEHGAVSRQTVYEMARGAKAVAQADYAVGISGIAGP
                     GGGSESKPVGTVWFGFAFPGGSCEAMRRFDGNRESVRAQAVAFALERLAGLIENGGDA
                     V"
     gene            complement(10676..12244)
                     /gene="msrAB"
                     /locus_tag="WJJ54_000702"
     CDS             complement(10676..12244)
                     /gene="msrAB"
                     /locus_tag="WJJ54_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /protein_id="HEZ7341594.1"
                     /translation="MKHRTFFSLCAKFGCLLALGACSPKIVDAGAATVPHTLSTLKTA
                     DNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLH
                     EKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSI
                     NEAQALALIRDPNADLGSLKHSFYKPDTQKKDSKIMNTRTIYLAGGCFWGLEAYFQRI
                     DGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDP
                     TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAE
                     EYHQDYLIKNPNGYCHIDIRKADEPLPGKTKTAPQGKGFDAATYKKPSDAELKRTLTE
                     EQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPID
                     AKSVTEHDDFSYNMRRTEVRSHAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQ
                     MDAAGYGALKSKVK"
     gene            12389..13654
                     /gene="ftsY"
                     /locus_tag="WJJ54_000703"
     CDS             12389..13654
                     /gene="ftsY"
                     /locus_tag="WJJ54_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEZ7341595.1"
                     /translation="MFSFFRRKKKQETPAPEEAQVQETAAKAESEVTQIVENIKEEVE
                     SLTESVKGQVESAVETVSGAVEQVKEAVAEMLSEAEEAAEKAAEQVEAAKEAIAETVG
                     EAVGQVQEAVATTEEHKLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELET
                     VLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPET
                     KEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN
                     VTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKA
                     MPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRP
                     VPVRYIGVGEGIDDLRPFDARAFVDALLD"
     gene            14319..>15761
                     /locus_tag="WJJ54_000704"
     CDS             14319..>15761
                     /locus_tag="WJJ54_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly/adherence protein PilC"
                     /protein_id="HEZ7341596.1"
                     /translation="MNKTLKRQVFRHTALYTAILMFSHTGGGGQAQAQTQTHKYAIVL
                     NAQKLPEVKWGSSYTSLGHKDKDLQFTHTSNFGIKKNIILSFNNTDEVVAEKKDAVVF
                     GAATYLPPYGKVSGFDDKRLTERKNAVDWIGTTKPGLVGYSYEDVTCNSSNCPEVSYK
                     TQFTFDKHQLAKKKTDNKLDIYEDKSRDNSPIYKLPDYPGLGVSFNLSGESTVKPKRL
                     SQLVSSFSEDVTQQNGANSPYKDKNLVYTTDDYRNQGNHNHQDKHHAIIFYLNAKLHL
                     LDKKQIKNIAQGKTFNLGTLKPRIDLTEAWKNRNGGFFNNGNWTFEDKGEVSVKLSLP
                     QVKAGRCINKANPNPKAQALSPALTAPALWFGAGQDGKAQMYSASVSTYPDSSSSRIF
                     LQNLERKTDPGRPGRYSLKPLNEAQIKSKEPSFTSRQTIIRLDGGVQQIKLGRNNDEV
                     VNFNGNNGNNATFGIVKDLGVDPDANEWKKV"
BASE COUNT         3542 a         4030 c         4611 g         3578 t
ORIGIN      
        1 ccgtcaaata agaaaggcgt tttgtccagc cggcttgtac cggcggtatc gcaaacttcg
       61 ccttaatgcg cccgattggc cgtgatgggc ttcagacggc attgttttgc cggtttacgg
      121 ccggtattca ggcttcatac cgttgggcag gagctgccaa acgtaacctg gttctttcat
      181 tttacctgcc gtttcccctg cttcgtcgcc gtaaccccag aaataatcca cgcgcaccgc
      241 gcctttaatc gcgctgccgg tatcctgcgc cataatcagg cggttgagtg ctttgcgggt
      301 aaccggatgg gcggtggcga caaataaggg cgcacccaag gtaatgtagt gccggtcgac
      361 tgcgccagcg tactcgccca tcagcggcgt gcccagtgcg ccgacagggc cgtcattgct
      421 gcttccggta agctctcgga aaaagatata gctggggttt tgacccaaaa cttcggcgag
      481 gcgttgcgga ttttgccgca tataagactt aatgccctgc atggaggttt gtccgagttt
      541 gaggtagccc ttatccgcca tatagcgtcc gatggaaacg tagggatgtt cgtttttgtc
      601 ggcatagccg atgcggatgt atttgccgga cggggttttc agacggcccg agccttggat
      661 gtgcataaaa aaaagttcga cagggtcttc ggcgtaaccg agtatcgggg ctttgccgtc
      721 aagcgcgccg ccgttgattt ggttgcgcgt gtggtagggg aggaagcggc ttccttcaaa
      781 cctgcctttg attgccgttg tgcgcgcggt gatggggaat cgggagaggt cggcggtgtg
      841 cgtgccgccg gcattgtcga ttgtgccgct gtttttcccc gtctgcctga tgcggacaag
      901 ggcttttccg ctccgcaaac cggcaggcag ggggacggag ataaaatcgt cgggaatacc
      961 gtaaatcggg aagcgggctt gtgccgtccg cctgtcgtcg cccttcagca ccggttcgta
     1021 atagccggta accgtaccgg caaggcttcc gttgcctgca acctgccacg gcgtgaaata
     1081 gcgttcaaaa aactgttttg cctgaaagga atggacgggg gtttgaaagg cttgggcgca
     1141 cacatcctgc cagccttggc ggtttttcaa attggcgcag ccgaggcgga aggattgcag
     1201 gcttttggcg aaatcctgcg ccgcccagtg gggcagggac aggtgcggca caacggtata
     1261 aacggccccg ccgccagcaa ccgtcgttcc ggcggggtcg gggatgccgg ccggccggtc
     1321 cgggccgttg atgacggatg tgtcgggttg cggaaaggtt tggatgctct tgctttggca
     1381 ggcggcgagg atggcggcgg agatgccgta cagggcggcg cggaacaggt attttttcat
     1441 aatggacaat gttgccggca gtaataagaa agatggtttc gggcggcgtt gcggcagccg
     1501 tggagagggg attttaacac agggcgcagc tgcagcctgc ggaactttcc gccgcgcggt
     1561 actgcagata aaaataactt gcatttgtat ttacaagcaa tgaaaatatt ccgataatat
     1621 attattcatc atccttgttc gttcgcgttt atgctggtcg cttttttaat tatgttgcgc
     1681 gagggtatcg aagccgcgct cattgtcggc atcgttgccg gttttctgaa acagtccgga
     1741 cattccaaac tgatgcctaa ggtctggttc ggggtcgtcc ttgcttcttt gatgtgtttg
     1801 gggctggggt acggaatcca ttcggcaaca ggcgagattc cccaaaagca gcaggagttc
     1861 gtcgtcggca ttatcggttt ggttgctgtc gcgatgctga cttatatgat tttatggatg
     1921 aaaaaagccg cccgttcgat gaagcggcag cttcaggatt ctgtgcaggc ggctttgaac
     1981 cgtggcagcg gtcaaggatg ggccttggtc ggtatggcgt ttcttgccgt ggcgcgcgaa
     2041 ggtttggaga gcgttttttt cctgcttgcc gtattcaaac agagcccgac gtggcagatg
     2101 ccggccggtg cggtagcggg ggttttggct gccgccgtga ttggcgcgtt gatttatcag
     2161 ggtgggatgc gcctgaatct ggcgaagttt ttccgttgga caggggcgtt tctgattatc
     2221 gttgccgctg gtctgcttgc cggttcgctg cgtgcgctgc acgaagcagg catttggaac
     2281 gcgcttcagg acattgtgtt cgactcatca aaatatttgc acgaagacag cccgttgggc
     2341 gtgctgctcg gcggattttt cggctatacc gaccatccga cgcagggcga ggccttggtt
     2401 tggctgctgt accttattcc cgtcataact tggtttttgt gcggcagcag gccgtctgaa
     2461 actttaaccc gtaaagagga gctgaaatga gaaaattcaa tttgaccgca ttgtccgtga
     2521 tgcttgcctt aggtttgacc gcgtgccagc cgccggaggc ggagaaagct gcgccggccg
     2581 cgtccagtga ggcgcaaacc gccaacgagg gcggttcggt cagtatcgcc gtcaacgaca
     2641 atgcctgcga accgatggaa ctgaccgtgc cgagcggaca ggttgtgttc aatattaaaa
     2701 acaacagcgg ccgcaagctc gaatgggaaa tcctgaaggg cgtgatggtg gtggacgagc
     2761 gcgaaaacat cgcccccgga ctttccgata aaatgaccgt caccctgttg ccgggcgaat
     2821 acgaaatgac ttgcggtctt ttgaccaatc cgcgcggcaa gctggtggta accgacagcg
     2881 gctttaaaga caccgccaac gaagcggatt tggaaaaact gtcccaaccg ctcgccgact
     2941 ataaagccta tgttcaaggc gaggttaaag agctggtggc gaaaaccaaa acctttaccg
     3001 aagccgtcaa agcaggcgac attgaaaagg cgaaatccct gtttgccgac acccgcgtcc
     3061 attacgaacg catcgaaccg attgccgagc ttttcagcga actcgacccc gtcatcgatg
     3121 cgcgtgaaga cgacttcaaa gacggcgcga aagatgccgg atttaccggc tttcaccgta
     3181 tcgaatacgc cctttgggtg gaaaaagacg tgtccggcgt gaaggaaatt gcagcgaaac
     3241 tgatgaccga tgtcgaagcc ctgcaaaaag aaatcgacgc attggcgttt cctccgggca
     3301 aggtggtcgg cggcgcatcc gaactgattg aagaagtggc gggcagtaaa atcagcggcg
     3361 aagaagaccg gtacagccac accgatttga gcgatttcca agccaatgtg gacggatcga
     3421 aaaaaatcgt cgatttgttc cgtccgctga tcgaggccaa aaacaaagcc ttgttggaaa
     3481 aaaccgatac caacttcaaa caggtcaacg aaattctggc gaaataccgg actaaagacg
     3541 gttttgaaac ctacgacaag ctgggcgaag ccgaccgcaa agcgttacag gcctctatta
     3601 acgcgcttgc cgaagacctt gcccaacttc gcggtatact cggcttgaaa taagccgcaa
     3661 gcgttcagac ggtatttggc ggcagatacc gtctgaagtt ttatagtgga ttaacaaaaa
     3721 ccagtacggc gttgcctcgc cttgccttgc cgtgctattt atactgtctg cggcttcgtc
     3781 gccttgtcct gatttttgtt aatccactat atccgccata tattgcaggg cgggatttca
     3841 acctgccgct atcggttaat ggaaaaacgg cgtgcaggga tacccatcct gctgcacgga
     3901 tattgaagga aacaccatga gcaaaaacca acccgcacaa ccgaccaggc gcactctttt
     3961 taaaaccgcg atcgcagccg gagcagtcgg cgcaatcgga ggttatctcg gcggcaaaaa
     4021 acagggcgaa accgccgaac gcaccgccga aagccaacac tcgccccaag cctatccctg
     4081 ctacggcgaa catcaggcag gcatcgttac gccgcagcag gcgttttcga ttatgtgcgc
     4141 cttcgacgta accgcgcaaa gtgccaagca gctggaaaac ctgttccgca cgctgaccgc
     4201 ccgcatcgag tttctcaccc aaggcggcga ataccaagac ggcgacgaca aacttccgcc
     4261 agccggcagc ggcattttgg gcaaagcctt caaccccgac gggttgaccg ttaccgtagg
     4321 ggtgggcagc agcctgtttg acggtcggtt cggactcaaa gacaaaaaac cgattcattt
     4381 gcaggaaatg cgcgacttct ccaacgataa gctgcaaaaa agctggtgcg acggcgattt
     4441 gagcctgcaa atctgtgcct tcacccccga aacctgccaa gccgccctgc gcgacatcat
     4501 caaacacacc gtccaaaccg ccgttatccg ttggagtatc gacgggtggc agcccaaatc
     4561 cgaacccggc gcgatggcgg cgcgcaacct gttgggcttc agggacggca cgggcaaccc
     4621 caaagtttcc gaccccaaaa ctgccgacga ggttttgtgg acgggggtgg ccgccaacag
     4681 cctcgacgaa ccggagtggg cgaaaaacgg cagctatcag gcagtccgcc ttatccgcca
     4741 ctttgtcgag ttttgggaca ggacgccgct tcaagagcaa accgacattt tcgggcggcg
     4801 caaatacagc ggtgcgccga tggacggcaa aaaagaagcc gaccaaccgg attttgccaa
     4861 agaccccgag ggtgatatca cgcccaaaga cagccatata cgcctggcga atccgcgcga
     4921 tcccgaattc ctcaaaaaac accgcctctt ccgccgcgcc tacagctatt cgcgcggact
     4981 cgcctcaagc ggacagcttg atgtcgggct ggtgttcgtc tgctatcagg caaaccttgc
     5041 cgacggattc atcttcgtgc aaaacctcct caacggcgaa ccgctggaag aatacatcag
     5101 ccccttcggc ggcggctatt tcttcgtctt gcccggcgtg gaaaaaggcg gctttttggg
     5161 gcaagggctg ctgggcgtat aaatccgcca tataaaaaac gccgtctgaa tccgataagg
     5221 ggttcagacg gcattttact gtttgggcgg tcaggctttt ttgacgaatt cagattttaa
     5281 attcatcgcg ctgccgtcga ttttgcaggc gatgttgtga tcgccttcct gcaggcgtat
     5341 gcctttgact ttcgtacctt gtttgatcgt catcgagctg ccttttacct tgaggtcttt
     5401 gatgaggatg atggtgtcgc cgttttgcag caccgcgccg ttggcatcgc gcacttcttc
     5461 ggcggcttcg gctgcggcgg attcggtttt attccattcg tgggcgcatt cggggcagat
     5521 gtattgtccg ccgtcttcgt aggtgtattc ggaggcgcat tgcgggcaag ggggtaatga
     5581 catggtttgc cgtccttatc ggatgtttgt tttgggatgc cgtctgaaac ctgaaaccgg
     5641 cttcagacgg catagcttta ttgtttgtct ttttcaggac gcacccagcc ttcgatgacg
     5701 gtttggcggg cgcgggcgag ggcgagtttg ttgtcttcga cattgcgggt aatcgtgctg
     5761 cccgcgcctg tggttacttt gttgccgatt ttgactgggg agaccaagac gcagtttgaa
     5821 ccgatgcgca cttcgtcgcc gatgacggtt ttgtgtttgt gcacgccgtc gtagttggca
     5881 ataatcgtgc ctgcgccgaa gttggttttg ctgccgactt cggcatcacc aatgtaggtg
     5941 aggtggttgg ctttggtgcc gttgccgatg gcggcgtttt tgacttcgac gaagttgccg
     6001 atgtgtacgt cgtctgcaag gcgggcttgc ggacgcaggc gggcgtacgg gccgattcgg
     6061 ttgttttcgc cgacttcgca gtcttcgagg tgggagaagg gggcgatttt gctgtttgca
     6121 ccgattttgg cgtttttgat gacgcagttt gcgccgattt cgacgttgtc gccgagctcg
     6181 atttcgcctt caaagataca gttcacatca atcacgacgt cttgcccgtg tttcagacga
     6241 ccccgcaaat cgaaacgtgc cgggtcgtgc agggtaacgc ctgctttgag caattcttgc
     6301 gcctgtccgg tttggaagat gcgttcgagt tcggcgagct ggcgtttgtt gttcacgccg
     6361 gcggcgaggt gggaggcgcg gacttggacg ggatgaactt taataccgtc ggcaacggct
     6421 ttggcaatga ggtcggttaa ataatattcg ccttgagcat tgttgctgga gaggctgttc
     6481 agccagtttt ccagtttggc gttgggcaga accaaaatgc cggtattgat ttctttcacg
     6541 gctttttggg cggcgtcggc gtctttttct tcgacaatgg cggttacgct gccgctgccg
     6601 tcgcggatga tgcgccccaa acctgacggg tcggcgggca cgtcggtcaa cagcccgact
     6661 tcgttgcctg cggcttcgag cagggtttcg agggtttcaa cgtcaattaa aggaacgtcg
     6721 ccgtacaaca ccagcgtgcg gccttcggcg gcaaggtggg gcagggcggt tttgacggcg
     6781 tggccggtgc cgagctgttc ggtttgttca acccagacga catcgcgttt gacagcgttt
     6841 aaaacttggt ctttgccgtg cccgatgacg acgcagatgt tttgcggatt cagcgcggcg
     6901 gcggtgtcga taacgcgccc gagcatgggc ttgccgccga tgcggtgcag cactttgggc
     6961 attttggaat acatgcgcgt gcctttgccg gcggcgagga taacgatgtt taaagtgttt
     7021 tgcggcatga cggtttcctg tgcaatgccg tctgaagcag cttcagacgg catagggtgg
     7081 gtttatcggt tttgaaattt gggcttttgc cagttctgtc cgcgtacgcc ttgttcggaa
     7141 tcgtcggttt ggtcgggcag cacggcatgg cgttcgggac ggtattggtt gtagttcata
     7201 tttttcgagt agctgccgtc ttggtaataa acgggcgtgc cggcgggata tttttgacgg
     7261 acggcggtct tgccgttgcc gtcttgataa gtttcccacg cgcagcccga caaaagggcg
     7321 gcggcagtca tcaggataag gaaggtttta cgcataacat tctttcgtat tttcgggggt
     7381 tgtgcgagta ttgtaatgat tttggcggtg ttctgacaaa gtttctgcat accgagccag
     7441 ttgcgccata tcgcttacgg aagcatcgat aaagggcagc gcgtgggatt ttgcgccgaa
     7501 ccagacggtt ttcatgccca atgcttttgc ctgatgcagg ttgtccgcgc tgtcgtccac
     7561 cataatgcag cattcgggcg gtacgtccaa aaggcggcag acattgagat acgcttgcgg
     7621 attgggtttg tacagcagtc cgaaatcatc cgtgccgaac agtgcgtcga aacggttttc
     7681 caaaccgagt gcgccgacaa cggcgcggac gtaaaacgac gggccgttgg aaaaaactgc
     7741 cttgcgccct tttaggcggc tcagggtgtt ttgtgtttca ggcatgccgt gcagcctagt
     7801 caggattgca tcgatcggat ggctttcgcg caaaaaatcg gcgatgtcga tttcgggatg
     7861 gtggatttgc agtccggcaa gcgttgcgcc gtagcggtgc caatattcct gacgcaggtc
     7921 ggacgcggcg gattcggaga gtttgaggcg gtgtgccata tagcgtgtca tagcgcggtt
     7981 gatgaggtgg aagatgccgg catcggcatt gtgcagcgtg ttgtcgaggt cgaacagccg
     8041 cacggtcggg ttttcttgca tgttgaaccg tgaaaatttg ttagaatgtt attttacagc
     8101 gaatagagga ggactcggaa tgaaacggaa aatttggctg ctgccgctgc tggcggtttc
     8161 ggcatacctg caggcgcaga cggaagtcag gctggcggtg cataagtcgt tcagcctgcc
     8221 caaagggttg attgcgcgct tcgagcgggc aaacgatgcg aaggtgtcga ttattcaggc
     8281 gggcggcgcg aacgaaatgc tcaacaaact gattttgagc cgcgccaacc cgattgccga
     8341 cgcggtgtac ggtttggaca acgccaatat cggcaaggcg cgggaaatgg gcattttggc
     8401 ggcggcgcaa cccgaatccg cccccgtcgc ggtcgggctg ccttcggctt tggcggtcga
     8461 ttacggctat gtgtccatca attacgacaa aaaatggttt gaaggcaaaa agcttcctct
     8521 gccgcaaacc ctgcaggatt tgacccgccc cgaatataaa aacctattgg tcgtaccgtc
     8581 tcccgccacg tcgtccccgg ggctgggctt cctgatggcg aacatcagcg gtctgggcga
     8641 agaaggcgcg ttcaaatggt gggcacagat gcggcagaac ggcgtgaagg tcgccaaagg
     8701 ctggagcgag gcgtattaca ccgacttttc gcacaacggc ggcgcgtatc cgctggtggt
     8761 cggttatgcc gccagcccgg cggcggaagt gtatttttcc aaaggcaaat acagcgagcc
     8821 gccgacgggc aacctgtttt taaaaggcgg cgtattccgc caggtcgaag gcgcggcggt
     8881 cttgaagggc gcgaaacagc cggaattggc ggcaaaactg gtgcaatggc tgcaaagtcg
     8941 ggaagtgcag caggcggttc cgtccgaaat gtgggtttac cccgccgtca aaaacacgcg
     9001 cctgcccgac gtgttccgct tcgcccaagc cccgacgcac accaccgccc ccgcgcagcg
     9061 cgatattgat gcgaaccagc gcggatgggt ttcccgttgg attagaacgg ttttgaaata
     9121 aaacaaacat accgccccgc agggcttcat acggcatttt tacacctgtg ccgattacgc
     9181 cgcacggggc ggatgttcga tcaagaggaa aacaatggac ttcaaacaat ttgatttttt
     9241 acacctgatc agtgtttccg gttgggagca tctggctgaa aaggcgtggg cgttcgggct
     9301 gaaccttgcc gccgcgctgc ttattttttt ggtcggaaaa tgggcggcga aacgcattgt
     9361 cgctgtgatg agggcggcga tgacgcgcgc gcaggtcgat gccacgctga ttagtttttt
     9421 gtgtaatgtt gccaatatcg gcttattgat tttggtgatt attgccgcat tgggcagatt
     9481 gggcgtttcc acaacatccg taaccgcctt aatcggcggc gcgggtttgg cggtggcgtt
     9541 gtccttgaaa gaccagctgt ccaattttgc cgccggtgcg ctgattatcc tgttccgccc
     9601 gttcaaagtc ggcgatttta tccgcgtcgg cggttttgaa ggatatgtcc gagagattaa
     9661 aatggtgcag acttctttgc ggacgaccga caacgaagaa gtcgtgctgc ccaacagcgt
     9721 ggtgatgggc aacagcatcg tcaaccgttc cacactgccg ctgtgccgcg cccaagtgat
     9781 agtcggcgtc gattacaact gcgatttgaa agtggcgaaa gaggcggtgt tgaaagccgc
     9841 cgtcgaacac cccttgagcg ttcaaaacga agagcggcag gccgccgcct acatcaccgc
     9901 cttgggcgac aatgccatcg aaatcacatt atgggcttgg gcaaacgaag cagaccgctg
     9961 gacgctgcaa tgcgacttga acgaacaagt ggtcgaaaac ctccgcaaag tcaatatcaa
    10021 catcccgttc ccgcaacgcg acatacacat catcaattct taaacgccgt ctgaaagagg
    10081 agtgggaaat ggacgcgctg cacaccatcg cccgaaacct gacgaaaaaa cgtcaaaccg
    10141 taagctgtgc cgaatcctgc acgggtgggc tgcttgccgc cgtattcaca agcgttgcag
    10201 gcagttcgca atggttcgat caaagttttg taacatacag caacaaagcc aaagaagacc
    10261 gcttgggcgt gttgcccgaa accctgctcg aacacggcgc ggtcagccgc caaaccgtct
    10321 atgagatggc gcgcggcgcg aaagccgtgg cgcaggcgga ttacgccgtc ggtatttccg
    10381 gcatcgccgg tccgggcggc ggcagcgaaa gcaaacccgt cggcacggtt tggttcgggt
    10441 ttgcctttcc gggcggaagt tgcgaagcaa tgcgccgttt tgacggcaac cgcgaatccg
    10501 tccgcgcgca ggcggtcgcc ttcgcgttgg aacggttggc ggggctgatt gaaaacggcg
    10561 gcgatgctgt ctaaacaaaa tctccgtctg gacagaatcc ccgccggata aaaaataccg
    10621 tctgaaacgt tgcaggtttc agacggtatt ttgtcgggtt aggcggcggt gcggcttatt
    10681 tcactttact cttcaacgcg ccgtagcctg ccgcgtccat ttgttccagc gggatgaatt
    10741 tcaagctcgc gccgttgatg cagtagcgca gtccgccttt gtcgcgcggg ccgtcgggga
    10801 agacgtgtcc caaatgcgaa tcggcggcgt ggctgcgcac ttcggtgcgg cgcatgttgt
    10861 agctgaaatc atcgtgttcg gtaacggatt ttgcatcaat cgggcgcgtg aagctcggcc
    10921 agccgcagcc ggaatcatat ttgtcggcgg agctgaacaa aggttcgccg ctgacaacgt
    10981 ccacataaat gccgggtttg aacaaatggt cgtattcgtg gctgaaggca tattcggtcg
    11041 cgctgttttg ggtaacttgg tattgctctt cggtcagggt gcgtttgagt tcggcgtcac
    11101 tcggtttttt atacgttgcc gcatcgaagc ctttgccttg cggggcggtc ttggttttgc
    11161 ccggcagcgg ttcgtcggct ttgcggatat cgatgtggca gtagccgttg gggtttttaa
    11221 tcaggtagtc ctgatggtat tcctcggcat cgtagaagtt tttcagcggc tcgttttcaa
    11281 caacgagggg cagttggtat ttttgctgct cgcgtttgag ggcggcggcg atgacggctt
    11341 tttcggcggg gtcggtgtag tacacgccgc tgcggtattg cgtaccggtg tcgttgccct
    11401 gtttgttgag gctggtcgga tcaacgacgc ggaagaaata ttgcaggatg tcgtctaggc
    11461 tgagtttgtc ggcatcgtag gtcactttga cggtttcggc gtggcccgta tggcggtagg
    11521 acacgtcttc atagctcgga tttttcgtgt tgccgttggc gtagccggat accgcgtcaa
    11581 ccacgccgtc gatgcgttgg aaataggctt ccaagcccca gaagcagccg ccggcgaggt
    11641 agatggtgcg cgtgttcatg atttttgaat cctttttctg agtgtcgggt ttgtagaacg
    11701 aatgtttcaa gctgcccaaa tcggcattcg ggtcgcggat taacgccaac gcctgcgctt
    11761 cgttgatgct gcctttgacg atgcgctgca cgtcgccgtc tttaccgatt aacgcccacg
    11821 aagggtaaac gctgatattc aggctttggg cgatcgtgcc gccgttgtcg gttacgacgg
    11881 gcagcttggg ataattcaaa ccggcatacc atttttggaa gtcgccgtct tttttctcgt
    11941 gcaaaaagcc cggagacgcg acggtaatca ggttggcgga gctgaatttt gcatcttgcg
    12001 cccatttttc ggtctgtccc aattcggaca gacacaaagg acaccagctc gcccaaaatt
    12061 taatcagcgt cggtttgtct tttttcaagt aaacactggc ggggcggttg tccgcagttt
    12121 tcaaagtgga taaagtgtgc ggcacggtcg cggctccggc atcgacgatt ttgggcgaac
    12181 aagcacccag cgcaagcagg cagccgaact tggcgcaaag ggaaaagaaa gtacggtgtt
    12241 tcattttgag tttcctgtgt ggacggtttg catgattaga cgtttgagat gccgaaacct
    12301 tacagctcgg attttcagac aaccttgccg cgtaaaatac gctacaatac gccctgtttc
    12361 aagtttctaa aattaaaagg aaaattcaat gttcagcttc ttccgtcgca agaaaaaaca
    12421 ggaaacgccg gctcccgagg aggctcaagt tcaggaaact gcagcaaaag cagaatccga
    12481 agttactcaa atagttgaaa atattaaaga agaagtcgaa tctttaacgg aaagcgtcaa
    12541 agggcaggtc gaatcggctg ttgaaaccgt cagcggtgcg gttgaacaag taaaggaagc
    12601 cgttgccgag atgctgtctg aagcagagga agcggcggaa aaagcagcgg aacaagtcga
    12661 agcggcaaaa gaagccattg ccgaaaccgt cggcgaggct gtcgggcaag ttcaagaagc
    12721 cgttgcaaca actgaagaac acaagctcgg ttgggcggcg cgtttgaaac aaggtttgac
    12781 caaatcgcgc gacaaaatgg cgaaatcgct ggcgggcgtg ttcggcggcg gacaaatcga
    12841 cgaagatttg tacgaagagc tggaaaccgt gctgattacc agcgatatgg gcatggaagc
    12901 caccgaatac ctgatgaaag acgtgcgcga ccgcgtcagc ctcaaagggc tgaaagacgg
    12961 caacgaattg cgcggcgcgc tgaaagaagc cttgtacgac ctgattaagc ctctagagaa
    13021 accgctggtt ttgcccgaaa ccaaagagcc gtttgtcatc atgcttgctg gcatcaacgg
    13081 cgcgggcaaa accacatcca tcggcaaact cgccaaatat ttccaagcgc agggcaaatc
    13141 tgtgctgctt gccgccggcg atactttccg cgccgccgcg cgtgagcagc ttcaagcttg
    13201 gggcgaacgc aacaacgtaa ccgtgatttc gcaaaccacg ggcgattccg ccgccgtgtg
    13261 cttcgatgcc gtccaagccg ccaaagcgcg cggcatcgac attgtgctgg ccgacaccgc
    13321 cggccgcctg cccacgcagc ttcacttgat ggaagaaatc aaaaaagtga aacgcgtgct
    13381 gcaaaaagcc atgcccgacg cgccgcacga aatcatcgtc gtgcttgatg ccaacatcgg
    13441 gcaaaacgcc gtcaaccaag tcaaagcctt tgacgacgca ttagggctga ccggtttaat
    13501 cgtgaccaaa ctcgacggca cggcaaaagg cggcatcctc gccgcgcttg cctccgaccg
    13561 ccccgtcccc gtccgctaca tcggcgtggg cgaaggcata gacgatttgc gcccgtttga
    13621 cgcgcgcgcg tttgtggacg cactgctgga ttgagccgaa atgccgtccg aaaacagcag
    13681 accgatgccg tcattcccgc gcaggcggga atccaggtct gtcggcgcgg aaacttatcg
    13741 gataaaacgg tttcttgaga ttttacgttc cggattccca ctttcgtggg aatgacggaa
    13801 tgtaggtttg cgggaatgac ggtttaggta tttttatagc aagccgtagg gtgggatgcc
    13861 gccggagggc atcatattct tggaatagcg cattaaaaag agtatgataa tggaaacaca
    13921 aaagattccg gcaatgcccg tgcgccgttc ccgtccgtca ttcccgcgca ggcgggaatc
    13981 cagacctgtc ggaacggaaa cttatcggat aaacggtttc tctagattcc gcatcctaga
    14041 ttcccgcctg cgcgggaatg acggttcggg tatttttata aggcagattc gcaaggtgcg
    14101 ccatagagtg ggctaaagcc cgccctacag cccgccctgc gaaacccacg aaacaccctg
    14161 cgaaacatat gttccaacac gcagggcggc acatcaagca ccgccctatg tgccgccctg
    14221 attcggaagg ggctgcatcc ctcccggata aagtccgatt ccaccgtccc gaaggacgga
    14281 tgtccgagcg gcggggtttc aaccgaaaag gaaatacgat gaataaaact ttaaaaaggc
    14341 aggttttccg ccataccgcg ctttataccg ccatattgat gttttcccat accggcgggg
    14401 gggggcaggc gcaagcgcaa acgcaaacgc ataaatacgc tattgtactg aacgcgcaaa
    14461 agctgcccga ggtaaagtgg gggagttcat atacatcatt ggggcacaaa gacaaggacc
    14521 tccaatttac ccatacgagt aatttcggaa tcaaaaaaaa cattatttta tcatttaata
    14581 ataccgatga agttgttgct gaaaaaaaag atgctgtcgt ttttggtgca gccacctacc
    14641 tgccgcccta cggcaaggtt tccggttttg atgacaaaag gctgaccgag cgcaaaaatg
    14701 ccgttgattg gattggtacg accaaaccgg ggctggtagg ctacagctac gaagatgtca
    14761 catgcaacag cagcaactgt cctgaagtta gctataaaac ccaatttacc tttgataaac
    14821 accagttggc aaaaaagaaa acagacaaca agctggatat atacgaagac aaaagccgcg
    14881 acaattcgcc catttacaaa ttgccggatt atcctgggtt gggcgtgtct ttcaatttga
    14941 gcggcgagag caccgttaaa ccaaagagac tcagtcaatt ggtatcttct tttagcgagg
    15001 acgtgacgca gcaaaatggt gcgaacagcc catacaaaga caaaaacctc gtttatacga
    15061 cagacgatta ccgtaatcag ggtaatcata accatcagga caaacaccac gccatcatct
    15121 tttatctaaa cgccaaactg cacctgctgg ataaaaaaca aatcaaaaat atcgcgcaag
    15181 gcaaaacatt taatttgggt accttgaaac cgcgcatcga tctgacggaa gcgtggaaaa
    15241 acaggaatgg gggctttttt aataatggta attggacgtt tgaagataaa ggagaagtca
    15301 gcgtcaaact cagcctgccg caagtcaaag caggccgctg catcaacaaa gcgaacccca
    15361 atcccaaagc ccaagccctt tcccccgcct tgaccgcccc cgcgctgtgg ttcggagctg
    15421 ggcaagatgg taaggcgcag atgtattccg cttcggtttc tacctacccc gacagttcga
    15481 gcagccgcat cttccttcaa aatctggaaa gaaaaaccga ccccggcaga cccggccgct
    15541 attccctcaa acccttgaat gaggcgcaga ttaaaagtaa agagccgagt ttcacaagtc
    15601 ggcaaacaat catccgattg gatggcggcg tacagcagat caaactgggt agaaacaatg
    15661 atgaggtcgt caattttaat ggaaacaacg gcaacaacgc aactttcggc attgttaagg
    15721 acttgggcgt cgatcctgat gccaatgagt ggaaaaaagt a
//
LOCUS       DAWKJW010000030        15313 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.030, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000030 DAWKJW010000000
VERSION     DAWKJW010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15313)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15313)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15313
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.030"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            27..1142
                     /gene="asd"
                     /locus_tag="WJJ54_000705"
     CDS             27..1142
                     /gene="asd"
                     /locus_tag="WJJ54_000705"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEZ7341597.1"
                     /translation="MKVGFVGWRGMVGSVLMQRMQEENDFAHIPEAFFFTTSNVGGAA
                     PDFGQAAKTLLDANNVAELAKMDIIVTCQGGDYTKSVFQALRDSGWNGYWIDAASSLR
                     MKDDAIIVLDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMT
                     YQAASGAGAKNMRELISGMGAVHAQVADELADPAGSILDIDRKVSDFLRSEDYPKANF
                     GVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSDNPTVIDGLCVRVGAMRCHS
                     QAITLKLKKDLPVSEIETILAGANDWVKVIPNEKEASIHELTPAKVTGTLSVPVGRIR
                     KLGMGGEYISAFTVGDQLLWGAAEPLRRVLRIVLGSL"
     gene            complement(1371..1901)
                     /locus_tag="WJJ54_000706"
     CDS             complement(1371..1901)
                     /locus_tag="WJJ54_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ7341598.1"
                     /translation="MESFELEDLTLWLVRDADEAEMWIDRWAISYPVVQMSEASAGQS
                     IGEWQAGLQTAFERIRGKYVAVVAHGAGAAAFLAWLYQADILTRKKIANIILVPQRPD
                     IFPDDAEHTFQRVRCPCRAALVVPEHGGVPHGWAQKQADLWNARLLVSPHSGSLNGML
                     GGWQWGMKLMQEMLLA"
     gene            complement(1911..2255)
                     /locus_tag="WJJ54_000707"
     CDS             complement(1911..2255)
                     /locus_tag="WJJ54_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341599.1"
                     /translation="MLPNKVLGKYDWNVDGKTGIGAAWVVAAFILPILVWAIFMLSRM
                     QGWLAPTKANPIWALVWLLISLPCLLIASKCLGWKGWRLLANVLACLAVCALLSVPAA
                     LLIAFTLQDLLK"
     gene            complement(2242..3021)
                     /gene="xth"
                     /locus_tag="WJJ54_000708"
     CDS             complement(2242..3021)
                     /gene="xth"
                     /locus_tag="WJJ54_000708"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEZ7341600.1"
                     /translation="MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADL
                     SADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGR
                     LSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK
                     NWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGW
                     RIDYQMVTPELAAKALSAHVYKDEKFSDHAPLVVEYDYAAE"
     gene            complement(3192..4613)
                     /locus_tag="WJJ54_000709"
     CDS             complement(3192..4613)
                     /locus_tag="WJJ54_000709"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEZ7341601.1"
                     /translation="MTTIYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVM
                     VVFDMIARWLRECGYPLTYVRNITDIDDKIIARAAENGETIGKLTARFIQAMHEDADA
                     LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSL
                     DDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFG
                     DTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFI
                     RVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTR
                     LYTTLKNTPPADPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQL
                     AGRLKALGGIIGLLQRDPTEFLQGSAASDGLSNEEIEDLIARRKQARADKNWAESDRI
                     RDLLNEHKIILEDNAGGTTWRRG"
     gene            complement(5301..6350)
                     /locus_tag="WJJ54_000710"
     CDS             complement(5301..6350)
                     /locus_tag="WJJ54_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ7341602.1"
                     /translation="MSSNQYIQSLELTNFTVLPNDTFEFSENLNVIVAENGCGKTHLL
                     KILYSLLEVTSNTKNRLLKTELQKSFADKLLNVFRPDSLGRLSKRLQGRGRTEIVLKL
                     QNGTTHSSLNFSSNSSSQVNVQSIGLKENEYTPTPIFLPSRELITLCPWFTSLYQNQS
                     IPFEETWFDTCMQLNHPLAKGPRETKIRELLEPIENAMGGKVSEEQGRFYLSLTNTGG
                     KIEAPLVAEGLRKFVMIARLIATGALLDKGYLFWDEPEANLNPKLIKVAARIIWSLSQ
                     QGIQVFIATHSLFLLRELELLKLENNTDLPVRFFSLIASDDGTKVEQGNSINDLNTLI
                     LLDENIMQADRYLNI"
     gene            complement(6433..7587)
                     /gene="obgE"
                     /locus_tag="WJJ54_000711"
     CDS             complement(6433..7587)
                     /gene="obgE"
                     /locus_tag="WJJ54_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEZ7341603.1"
                     /translation="MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGS
                     VWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPIGTLIRDLDTD
                     EIVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLA
                     DVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLI
                     EGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDETVNPAEEALAIINELRKYDEELYD
                     KPRWLVLNKLDMLDEEEAQARTAAFLEAVGWDYPKPDDRFQFDMETPRLFQISALTHQ
                     GTQELVHQINQYLTEKKRIEAEKAEAEKAAANVEIIEQQPKTDTGVFKPE"
     gene            7984..8172
                     /locus_tag="WJJ54_000712"
     CDS             7984..8172
                     /locus_tag="WJJ54_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEZ7341604.1"
                     /translation="MFGVEVMQGSPEKIEWMANLGNTFHGNLGWLLFAAVTGHVAMVV
                     VHRVQGKDVLYRMTGRVR"
     gene            complement(8207..9082)
                     /gene="rsmI"
                     /locus_tag="WJJ54_000713"
     CDS             complement(8207..9082)
                     /gene="rsmI"
                     /locus_tag="WJJ54_000713"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEZ7341605.1"
                     /translation="MFQKHLQKASDSVVGGTLYVVATPIGNLADITLRALAVLQKADI
                     ICAEDTRVTAQLLSAYGIQGKLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGTPAV
                     CDPGAKLAGRVREAGFKVVPVVGASAVMAALSVAGVEGSDFYFNGFVPPKSGERRKLF
                     AKWVRAAFPIVMFETPHRIGATLADMVELLPERRLMLAREITKTFETFLSGTVGEIQT
                     ALVADGNQSRGEMVLVLYPAQDEKHEGLSETAQNVMKILAAELPTKQAAELAAKITGE
                     GKKALYDLALFWKNK"
     gene            9136..9483
                     /locus_tag="WJJ54_000714"
     CDS             9136..9483
                     /locus_tag="WJJ54_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEZ7341606.1"
                     /translation="MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKN
                     GGMILFVEVKYRKNRQFGGVAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIE
                     GNRPPEWIQNITG"
     gene            9488..10081
                     /locus_tag="WJJ54_000715"
     CDS             9488..10081
                     /locus_tag="WJJ54_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HEZ7341607.1"
                     /translation="MTTLQERVAAHFAESIRAKQEAEKVLVEPTVQAAELMLQCLMND
                     GKILACGNGGSAADAQHFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFNHVF
                     SKQVRALGRAGDVLVGISTSGNSANVIEAIKAAHERDMHVIALTGRDGGKIAAMLKDT
                     DVLLNVPYPRTARIQENHILLIHAICDCIDSVLLEGM"
     gene            10145..10753
                     /locus_tag="WJJ54_000716"
     CDS             10145..10753
                     /locus_tag="WJJ54_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEZ7341608.1"
                     /translation="MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTT
                     GAQTDDNVMALRIETTARSYLHQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFV
                     GQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVT
                     YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR"
     gene            10761..11411
                     /locus_tag="WJJ54_000717"
     CDS             10761..11411
                     /locus_tag="WJJ54_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341609.1"
                     /translation="MPSEPPSDGIARHPKSTIKMAKKPNKPFRLTPKLLIRVVLLICI
                     TAIGALAIGIVSTFNPNGGKTLQTEPQHTDSPRETEFWLPNGVVGQDAAQPEHHHAAS
                     SEPAQPDGTDESGSGLPSPAAPKKNRVKPQPADTAQTDRQPDDAGTQAENTLKETPVL
                     PTNVPRPEPRKETPEKQAQPKETPKEKETPKENHTKPDTPKNTPPKPHKEILDNLF"
     gene            11451..12230
                     /gene="map"
                     /locus_tag="WJJ54_000718"
     CDS             11451..12230
                     /gene="map"
                     /locus_tag="WJJ54_000718"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEZ7341610.1"
                     /translation="MNGIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGVTTDEIDK
                     LVYDYHVNVQGGYPAPLHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTI
                     KKDGFHGDSSRMFTVGKVSPIAQRLIDVTHASMMAGIEAVKPGATLGDVGYACQQVAE
                     NAGYSVVQEFCGHGIGRGFHEAPQVLHYGKKGQGPVLKPGMIFTVEPMINQGKRHLRI
                     LNDGWTVVTKDRSLSAQWEHEVLVTETGYEILTVSPASGKP"
     gene            12385..12684
                     /locus_tag="WJJ54_000719"
     CDS             12385..12684
                     /locus_tag="WJJ54_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEZ7341611.1"
                     /translation="MKIFENIEDVKAIRKKTGLNQIDFWGKVGVTQSGGSRYETGRKM
                     PKPVRELLRLVHIECIDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKSERKKQS"
     gene            12922..13296
                     /locus_tag="WJJ54_000720"
     CDS             12922..13296
                     /locus_tag="WJJ54_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HEZ7341612.1"
                     /translation="MKLLTTAILSSAIALSSMAAAAGTNNPTVAKKTVSYVCQQGKKV
                     KVTYGFNKQGLTTYASAVINGKRVQMPVNLDKSDNVETFYGKEGGYVLGTGVMDGKSY
                     RKQPIMITAPDNQIVFKDCSPR"
     gene            complement(13484..14950)
                     /locus_tag="WJJ54_000721"
     CDS             complement(13484..14950)
                     /locus_tag="WJJ54_000721"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HEZ7341613.1"
                     /translation="MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALE
                     SSNAWNNAGTGHSALCELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLE
                     DNSFINAVPHMSLVMNEDHCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRG
                     RDENQPVAANYSAEGTDVDFGRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLK
                     TADTRNPDGQLTLRTRFLFLGAGGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPET
                     AEQHNAKVYGQASVGAPPMSVPHLDTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPL
                     SIHMDNLYPMLCAGWANMPLTKYLLGELRKTKEERFASLLEYYPEANPDDWELITAGQ
                     RVQIIKKDSEKGGVLQFGTEIVAHADGSLAALLGASPGASTAVPLMIRLMHQCFPERA
                     PSWEDRLKELVPGYGIKLNENPERADEIIAYTAKVLDI"
BASE COUNT         3738 a         4293 c         3769 g         3513 t
ORIGIN      
        1 acgatttttc ctcaaggagc aacacaatga aagtaggttt cgtcggctgg cgcggcatgg
       61 tcggttcggt tttgatgcag cgtatgcaag aagaaaacga cttcgcccac attcccgaag
      121 cgtttttctt taccacttcc aacgtcggcg gcgcagcccc tgatttcggt caggcggcta
      181 aaacattatt ggacgcgaac aacgttgccg aactggcaaa aatggacatc atcgttacct
      241 gccaaggcgg cgattacacc aaatccgtct tccaagccct gcgcgacagc ggctggaacg
      301 gttactggat tgacgcggca tcctcgctgc gcatgaaaga cgacgcgatt atcgtcctcg
      361 accccgtcaa ccgcaacgtc atcgacaacg gtttgaaaaa cggcgtgaaa aactacatcg
      421 gcggcaactg caccgtctcc ctgatgttga tggctttggg cggcctgttc caaaacgatt
      481 tggtcgaatg ggcgaccagt atgacctatc aggccgcttc cggcgcgggc gcgaaaaata
      541 tgcgcgaact catcagcggt atgggcgcag ttcacgccca agtggcggac gaacttgccg
      601 atcctgccgg ctcgattctc gacatcgacc gcaaagtatc cgatttcctg cgcagcgaag
      661 actatccgaa agccaacttc ggcgtaccgc tcgccggcag cctgattccg tggattgacg
      721 tggatttggg caacggccag tccaaagaag aatggaaagg cggcgtggaa accaacaaaa
      781 tcctcggccg cagcgacaat ccaaccgtga ttgacggcct gtgcgtccgc gtcggcgcga
      841 tgcgctgcca cagccaagcc atcactctga agttgaaaaa agacctgcct gtttccgaaa
      901 tcgaaacgat tttggcaggc gcgaacgact gggtgaaagt catccccaac gaaaaagaag
      961 ccagcatcca cgagctgact cctgccaaag ttaccggcac gctgtccgtc cctgtcggac
     1021 gcatccgcaa actgggcatg ggcggcgaat acatcagcgc gttcaccgtc ggcgaccagc
     1081 tcttgtgggg cgcggccgaa ccgctgcgcc gcgtattgcg tatcgtgttg ggcagcctgt
     1141 gagccctgtt tgaatggaaa tgccgtctga agcctgtttc agacggcatt ttccttgcaa
     1201 ccctgccgga taacgccctg ccggcactgc cgacgtaaaa aataaaggat tccatttccg
     1261 gcggtatgca gcagcccgac tttatccgaa cctgatgcgc ctgcacgtca atgaaaacag
     1321 cccgatatgc ggacttcctg ctacagccga aattccggta aggcaagcgt tcacgccagc
     1381 aacatttcct gcatcagctt cataccccac tgccagccgc cgagcatgcc gttcaaactg
     1441 cccgaatgcg gggaaaccaa caggcgggcg ttccacaaat ccgcctgttt ttgcgcccaa
     1501 ccgtgcggca cgccgccgtg ttcgggtaca accaatgcgg cacggcaggg acagcggacg
     1561 cgttggaaag tgtgttccgc atcgtcggga aaaatatcgg gacgctgcgg tacaaggatg
     1621 atgttggcaa ttttcttccg tgtcaggatg tctgcctgat acagccacgc caaaaatgcg
     1681 gctgcgcccg caccgtgtgc gacaacggcg acgtatttgc cgcgtatgcg ttcaaatgcc
     1741 gtctgaagcc ctgcctgcca ttcccctatg ctttgaccgg ccgacgcttc ggacatctgc
     1801 acgacgggat aactgatcgc ccagcggtct atccacattt ccgcttcatc cgcatcgcgt
     1861 accagccaca gcgtcaaatc ctcaagctcg aaactttcca ttgtccgcgc ctatttgagc
     1921 aggtcttgca gcgtgaacgc aatcagcagc gcggcaggca cactcaacag agcgcacacg
     1981 gcgaggcagg caagaacgtt tgccaacagc cgccagcctt tccaacccaa acatttggac
     2041 gcaatcagca ggcagggcag gctaatcagc agccacacca acgcccatat cgggtttgcc
     2101 ttggtcggcg caagccagcc ttgcatccgc gacaacataa atatcgccca caccaatatg
     2161 ggcaggataa acgcagcgac aacccatgcc gcgcctattc ctgtttttcc gtccacattc
     2221 caatcatatt tacccaaaac tttattcggc agcatagtca tactccacga ccagcggcgc
     2281 atggtcggaa aatttttcat ctttataaac gtgtgcggac aaggctttgg cggcaagttc
     2341 gggcgtaacc atctgataat cgatgcgcca cccgacatct ttcgcatacg cctgcccgcg
     2401 gttgctccac cacgtgtagc ccggcacatc gggataaagc gtgcgccaca tatccgtcca
     2461 accgagcttg tggataacct tgcctatcca ctcgcgttct tccggtagga agcccgaatt
     2521 tttctgattg cctttccagt ttttcaggtc gatgttttgg tgggcgatgt tccagtcgcc
     2581 gcaaacgaca atgtcgcgtc cttcgttttt catcgcttcg agcatagggt aaaacgcatc
     2641 aaggaaacgg tatttcacct gctggcgttc ttccgcgctg ctgccgctgg gcaaataaag
     2701 cgaaataacg ctcaacctgc cgaaatcgca acgcacaaac cgcccttccc tgtcgaattc
     2761 ttcaatgccc ataccgattt gcacattgtc gggtttgcgt ttgctgtaca ccgccacgcc
     2821 gctgtaaccg cgcttctcgg cgcaatgcca atggccgtgc atcccgtgcg gatttttcat
     2881 atcggcagac aaatcagcct cctgcgcttt gagttcctgc acgcagacaa tgtccgcgcc
     2941 cgatgcggcg atgtattcgt aaaaaccttt tttgtaggcg gagcggatgc cgttgacgtt
     3001 ggcggaaatg attttaagca taataaaaat aagttctcac aatgttccca tacacaaagc
     3061 agcacccggt gcgccgcccg gcatttccca ttcggccctg cctgctgaaa acggcggggc
     3121 ttcaagcggg aaatgccgtc tgaaaacgga aaaagagcaa aaggcggtac ttttgccctt
     3181 tccgatacag ttcaaccgcg ccgccaagtc gtgccgccgg cgttgtcttc caaaatgatt
     3241 ttgtgttcgt tcagaaggtc gcggatgcgg tcggattccg cccagttttt atcggcgcgc
     3301 gcctgtttgc ggcgggcgat caagtcttcg atttcttcgt tggagaggcc gtctgaagcc
     3361 gcgctgcctt gcaggaactc ggtcgggtcg cgttgcagca ggccgatgat gccgcccaag
     3421 gctttcagac ggcctgccag ttgcgcgtca ttggttttgt tcacttcgcc ggcaagttcg
     3481 aacaacaccg ccaccgcttt caccgtatca aaatcatcat tcatcgcaac ataaaagcgg
     3541 cgcgtgtagt catcgccggc ttcagacggc atcggatcgg cgggcggcgt atttttcaaa
     3601 gtcgtataca aacgcgtcaa cgcgcctttt gcatcatcca aatgcgcgtc ggaatagttc
     3661 aacgggctgc ggtagtgggc gcgcaggatg aagaagcgca cgacttccgg atcgtattgt
     3721 ttcaacactt cgcggatggt gaagaagttg cccagcgatt tggacatctt ttcgccgtcc
     3781 acgcggataa agccgttgtg cagccagtat ttgacgtggc tggcgatgct ttgcccgtgg
     3841 tgggtttgcg cgtgatgatg accgcaggta tgccccgtcg cgccgacgct ttgggcaatt
     3901 tcgttttcgt ggtgcggaaa ctgcaaatcc gcgccgccgc cgtggatgtc gaaggtatcg
     3961 ccgaacaggt tttcactcat ggcagagcat tcaatgtgcc aacccggacg gccgttgccc
     4021 cacgggcttt cccacgccgg ttcgcctgct ttggcggctt tccacaacac aaaatcaagc
     4081 ggatcgcgtt tgaaaccgtc cacttccacg cgttcgcccg cacgcaggtc gtccaacgat
     4141 ttgcccgaca attgtccgta agcggcaaac tcgcgcacgg cgtagtaaac gtcgccattt
     4201 gcggcaggat atgccttgcc gttttgaatc agggtttcaa tcatggcaat catttgcgga
     4261 atgttttccg ttgccttcgg ctcaatatcc ggacgcaaca cgcccaaagc atcggcatct
     4321 tcgtgcatgg cttggatgaa acgcgcagtc agtttgccga tggtctcgcc gttttcagcc
     4381 gcgcgggcaa tgattttatc gtcgatgtcg gtgatgttgc gtacataagt gagcggatag
     4441 ccgcactcgc gcaaccaacg ggcaatcatg tcgaacacca ccatcacgcg ggcgtgtccc
     4501 aaatggcagt aatcgtaaac ggtcataccg cagacgtaca tacgcacgtt ttcagggtcg
     4561 atgggggaaa agggttcttt ttgacgggtt agggtgttgt agatggtggt catgggatta
     4621 tggattaatc tttgttgctc ggatgataat ttctgttctg ttcctgtaga tacggaccaa
     4681 ggaacattac gtagttgcgg attattaata tggctgatat ttgtgaaaat tggttctgca
     4741 taacagtttg caaaattttt tgtaaattct gataatttaa acttatcttt taataagttt
     4801 gctaaatctg atgacgaggg ataaagttta cttcttatac taggcatttc aatatgaagg
     4861 actattttta tttcgttaca atctaaagcc aagcgagaaa aatctttttc ttcctgtttt
     4921 tctgctttaa atttagcaga aaccaatcct gccaatgaat ctcgaatttt tcttgcgatt
     4981 aaatatggta ggtcagaaag tttttcatct attgattggg catttggctc aagcccaagt
     5041 cggtaataat ctttaatttc gattagccaa agtgtcgatt catgaagggc tattatatct
     5101 acacctgagc tgccattatc gtcatctaca ctttgattta tcccgttctt tcccttttca
     5161 tttgtatcaa ttttattacg taaattacaa ctgttctgaa aaattttata atgttcccat
     5221 tcgtcatact tggtaacgta ataatcttca ggaaaagcaa aggttaatct cttttctgtg
     5281 attgtagtca tagcttaacc tcaaatattc agatacctgt ctgcctgcat aatgttttca
     5341 tctaacaata tcaatgtgtt caaatcatta atactgttcc cttgctccac ttttgttcca
     5401 tcatcggaag caatcaacga gaaaaaacgt acaggtaaat ccgtgttatt ttcaagcttc
     5461 aaaagttcca attctctcaa taagaataaa gagtgtgttg caataaaaac ctgaataccc
     5521 tgttgagata aagaccaaat aatacgggca gccactttga tcaatttagg attcagatta
     5581 gcttccggtt catcccaaaa tagatagcct ttatccagca atgcccctgt tgcgattaac
     5641 cgggcaatca tgacaaattt ccgcaaaccc tctgctacca aaggtgcttc aatcttaccg
     5701 cccgtatttg tcagcgatag ataaaacctt ccttgttctt cagatacttt tccgcccatc
     5761 gcgttctcaa taggttcgag caattctcga atttttgttt ctctggggcc tttggcaagc
     5821 gggtgattta attgcataca ggtatcaaac caagtttctt cgaaagggat gctttggttt
     5881 tgatacaaag aagtgaacca agggcaaagt gtaattaatt cgcggctggg taagaagata
     5941 ggtgtcggag tatattcatt ttctttcaat ccgatgcttt gaacattgac ttgcgatgat
     6001 gagttactgg aaaaattcag actactatgc gtagtgccgt tttgcagttt taaaacgatt
     6061 tccgtacgcc cgcgcccctg caaacgtttg ctcaacctgc ccaaggaatc gggacggaaa
     6121 acattcagta atttatcggc aaaacttttt tgcaattctg ttttcagtaa tctgtttttg
     6181 gtgttagatg ttacttctag caggctgtat aaaattttta acaaatgtgt tttgccacaa
     6241 ccgttttcgg caacaataac attgagattt tcagaaaatt caaaagtatc gtttggaaga
     6301 acggtaaagt ttgtcaactc aagcgactgg atatattggt tagatgacat ttttaatcca
     6361 tttcaatctt gctttaaaat tgtttcaaac aaccttttgt agaacaaata tcgtctgaaa
     6421 ccctttcttt tttcactccg gcttaaacac gcccgtatcc gttttaggct gctgttcgat
     6481 aatttcaaca tttgccgctg ctttctccgc ttcggctttt tcagcttcga tacgtttttt
     6541 ctcggtcagg tattggttga tttggtgtac caattcctgc gtgccttggt gggtcagcgc
     6601 gctgatttgg aagaggcgcg gggtttccat gtcgaattgg aagcggtcgt ctggtttggg
     6661 gtaatcccag ccgacggctt cgaggaaggc ggctgttcgc gcttgggctt cttcttcatc
     6721 gagcatatca agtttgttca gcaccagcca gcgtggtttg tcgtagagtt cttcgtcgta
     6781 tttgcgtaat tcgttgatga tggcgagtgc ttcttcggcg gggttgacgg tttcgtcgaa
     6841 gggcgctaaa tcgacgacgt gcaacagcag gccggtgcgc gataagtgtt tgaggaaacg
     6901 atggccgagg cctgcgcctt ctgccgcgcc ttcaatcagg ccggggatgt cggccatcac
     6961 gaagctgtgg ttttcgtcga tgcgtaccac gcctaagttt ggatgcaggg tggtgaaggg
     7021 gtagttggcg attttggggc gtgcggcgga tacggcggta atcagggtgg atttgccggc
     7081 gttgggcatg cctaataagc cgacatcggc gaggacttta agctcgagtt gcagggagcg
     7141 ggtttcgcct tcttcgccgg gcgtggattg tttgggcgca cggttgacgg aggatttgaa
     7201 gtggatgttg cccaagccgc ctttgccgcc tttggcgagg cagacgcgct ggccgtggta
     7261 ggtgaggtcg gcaacgattt catcggtgtc gaggtcgcgg ataagggtgc cgatgggcat
     7321 tttgaggacg atgtcgtccg cacctgcgcc gtaacggtcg gaaccgtggc ctttttcgcc
     7381 gtttttggct tggtagcgtt taacgaagcg gtattcgacg agggtgttgg tgttttcgtc
     7441 ggcttccgcc caaacgctgc cgcctttgcc gccgtcgccg ccgtccgggc cgccgcgcgg
     7501 tacgaatttt tcgcggcgga aactggttgc gccattaccg cctttgcctg cggcgacttc
     7561 gatttttgct tcgtcgatga atttcattca atgctcttgt ttgttggttt caaatggggg
     7621 gttcagacgg attaccgtgt gttttgatgc cgtccgaaca gaatttcgga cgctattata
     7681 agggataagc ggtatttcaa cacgccgtac ccaaactatt tgttccgccc atcttaatga
     7741 atttttaagc aaatcttcag cctgcaaaca aaattatgtc caacttcttt ggtacaatcg
     7801 cgcctttttg acattccgac ccgacggaat gtccgttcaa accgttacat ataataagtt
     7861 ttttatgaac acaaaccaac ctgccgttta cgacccgttg acacgcgcgc tgcactggct
     7921 gaccgttgcc ggtttcatcg gcattctgac caccattacg gcagcggccg cggcccgttg
     7981 aaagtgttcg gcgttgaagt gatgcagggt tcgccggaaa aaatcgagtg gatggcaaac
     8041 ttgggcaaca cgttccacgg caatttgggc tggctgctgt ttgccgccgt caccggacac
     8101 gtcgccatgg tcgtcgtcca ccgtgttcaa ggcaaagacg tgctgtaccg catgacggga
     8161 cgcgtacgct gattgcctcc ctcttacgat gccggcttgt ccggcactat ttgtttttcc
     8221 aaaacagtgc cagatcgtac aaagcttttt ttccctcgcc cgtgattttg gcagcaagct
     8281 ccgccgcctg tttggtcggc agctcggccg caaggatttt catcacattt tgcgcggtct
     8341 cagacaagcc ttcgtgtttt tcatcctgcg ccggataaag caccaacacc atctcaccgc
     8401 gcgattggtt gccgtccgcc accaatgccg tctgaatttc cccaaccgtg ccgcttaaga
     8461 acgtttcaaa cgttttcgta atttcgcgcg ccagcatcag acggcgttcg gggagcagtt
     8521 ccaccatatc ggcaagcgtc gccccgattc ggtgcggcgt ttcaaacatg acgataggaa
     8581 atgccgcccg cacccatttg gcaaacagtt tcctacgttc gcccgatttc ggcggtacaa
     8641 aaccgttgaa ataaaaatcg gatccttcca caccggccac gctcaaagcc gccatcaccg
     8701 cgcttgcgcc cacgacggga acgactttaa acccggcctc acgcacgcgg ccggcgagtt
     8761 tggcacccgg gtcgcacacg gccggcgtac ccgcatcgga aacctgtgcc acaaccatgc
     8821 cgtctgaaag atagccgaca atcttgtccg ccatctgccg ttcgttgtgt tcgcgcacac
     8881 tgacaagttt gccctgaatg ccgtacgcgc tcaaaagctg cgcggtaacg cgcgtgtctt
     8941 cggcacagat gatgtccgcc ttttgcaata ccgccaaagc gcgcagggta atgtccgcca
     9001 aattgccgat gggcgtggca accacgtata atgtccctcc gacgacgctg tcggaggctt
     9061 tctgcaagtg tttctgaaac ataaaaaatg ccgtctgaaa aacaaacatt ataaattata
     9121 aaggttaaac cgattatgcg cctaaaccac aaacagggcg aggcagggga agatgccgcg
     9181 cttgccttcc tccaatccca aggctgcaca ctgcttgccc gcaactggca ctgcgcctac
     9241 ggcgaaatcg acctgattgt caaaaacggc ggtatgattc tgtttgttga agtaaaatac
     9301 cgcaaaaatc ggcaattcgg cggtgtcgca tacagcattt ccccatccaa attattgaaa
     9361 ctgcaacgaa gtgtagagta ttatctgcaa cagaacaggt tgacaaacgt accgtgccgc
     9421 ctcgatgcgg tactgattga aggaaaccgc ccgcccgagt ggatacagaa tattacaggt
     9481 tgacgatatg acgacattac aagaacgcgt tgccgcccat tttgccgaaa gcatccgtgc
     9541 caaacaggaa gccgaaaaag tactggtcga gccgaccgta caggctgccg agctgatgct
     9601 gcaatgcctg atgaacgacg gcaagattct ggcgtgcggc aacggcggtt cggccgccga
     9661 tgcccagcac ttcgccgccg aaatgaccgg acgctttgaa aaagagcgca tggaactcgc
     9721 cgccgtcgcc ctgaccaccg acacatccgc gctgaccgcc atcggtaacg actacggctt
     9781 caaccacgtc ttcagcaaac aggtacgcgc cctcggacgt gcaggcgacg tcttggtcgg
     9841 catttccact tccggcaact ccgccaacgt catcgaagcc attaaagcgg cacacgaacg
     9901 cgatatgcac gtcatcgccc tgaccggccg cgacggcggc aaaatcgccg ccatgctcaa
     9961 agacaccgac gttctgctca acgtccccta tccgcgcacc gcccgcattc aggaaaacca
    10021 catcctgctg atacacgcca tatgcgactg tatcgactcc gtactgctgg aaggaatgta
    10081 acccttttca gacggcatgg cgcaaagcaa tgccgtctga aacgcccaag aaaggaagca
    10141 cccgatgaaa cccaaaccgc acaccgtccg caccctgatt gccgccattt tcagccttgc
    10201 ccttagcggc tgcgtcagcg cagtaatcgg aagcgccgcc gtcggcgcga aatccgccgt
    10261 cgaccgccga accaccggcg cgcaaaccga cgacaacgtt atggcgttgc gtatcgaaac
    10321 caccgcccgt tcctacctgc accaaaacaa ccaaaccaaa ggctacacgc cccaaatctc
    10381 cgtcgtcggc tacaaccgcc acctgctgct gctcggacaa gtcgccaccg aaggcgaaaa
    10441 acagttcgtc ggtcagattg cacgttccga acaggccgcc gaaggcgtgt acaactacat
    10501 taccgtcgcc tccctgccgc gcactgccgg cgacatcgcc ggcgacactt ggaacacatc
    10561 caaagtccgc gccacgctgt tgggcatcag ccccgccaca caggcgcgcg tcaaaatcgt
    10621 tacctacggc aacgtaacct acgttatggg catcctcacc cccgaagaac aggcgcagat
    10681 tacccaaaaa gtcagcacca ccgtcggcgt acaaaaagtc atcaccctct accaaaacta
    10741 cgtccaacgc tgactcggca atgccgtctg aaccgccttc agacggcatt gcccgacacc
    10801 ccaaaagcac aatcaaaatg gcaaaaaaac cgaacaaacc cttcaggctg acccccaaac
    10861 tcctgatacg cgtcgtattg ctcatctgta tcaccgccat cggcgcattg gcaataggca
    10921 tcgtcagcac attcaacccg aacggcggca aaaccctcca aaccgaaccg caacacaccg
    10981 acagcccccg cgaaaccgaa ttctggctgc caaacggcgt agtcggacaa gatgccgccc
    11041 aacccgaaca ccaccacgcc gcctcatccg aacccgcaca gccggacggc acagacgaaa
    11101 gcggcagcgg actgccgtcc cctgccgcac ccaagaaaaa ccgggtcaaa ccgcaacctg
    11161 ccgacacagc tcaaaccgac aggcagccgg acgacgccgg aacacaagct gaaaacacac
    11221 tcaaagaaac ccccgtactg cccacaaacg tcccccgtcc cgaaccccga aaagaaacac
    11281 ccgaaaaaca ggcgcagccc aaagaaacac ccaaagaaaa agaaacgccc aaagaaaacc
    11341 ataccaaacc ggacaccccg aaaaacacgc cgcccaaacc ccataaagaa attctcgaca
    11401 acctcttctg acccggcacg gcaggcacac ccgcaatcca aggaagcatt atgaacggca
    11461 tcatcatcaa aacccccgaa gaaatcgaaa aaatgcgcga gctgggcaaa ctcgtcgccg
    11521 aagccctcga ctacatcgga caattcgtca aacccggcgt aaccaccgac gaaatcgaca
    11581 aactcgttta cgactaccac gtcaacgtcc aaggcggcta tcccgccccc ctgcactacg
    11641 gcaacccgcc ctaccccaaa tcctgctgca cctccgtcaa ccacgtcatc tgccacggca
    11701 ttcccgacga caagccgctc aaagaaggcg acattatcaa catcgacctc accatcaaaa
    11761 aagacggctt ccacggcgac tccagccgta tgtttaccgt cggcaaagtc tcccccatcg
    11821 cccaacgcct gatcgacgta acccacgcct ccatgatggc gggcatagaa gccgtcaaac
    11881 ccggcgcgac actgggcgac gtaggttacg cctgccaaca ggttgccgaa aacgccggct
    11941 attccgtcgt acaggaattc tgcggacacg gcatcgggcg cggtttccac gaagccccgc
    12001 aagtgttgca ctacggaaaa aaaggacagg gccccgttct aaaaccgggt atgattttta
    12061 ccgtcgaacc gatgatcaac caaggcaaac gccacctgcg tatcctcaac gacggctgga
    12121 cggtggttac caaagaccgc tccctctccg cccaatggga acacgaagtc ttggtgaccg
    12181 aaaccggcta cgaaatcctc accgtcagcc ccgcctccgg caaaccctga agccggacgt
    12241 atccgcccca taaaaacaaa caatgccgtc tgaaagaaac ggcagatatg atatataata
    12301 taaaaacagg cttgacccgg cacattacga aaacaaagca aatcggaatt tgccccgcaa
    12361 ccagacaaac ttaaaggaag ttttatgaaa atatttgaaa atatagaaga tgttaaagcc
    12421 atccgtaaaa agaccgggct gaaccagata gacttctggg gcaaggtcgg cgttacccag
    12481 tctggaggct cgcgctacga aaccggccgc aaaatgccca aacccgtacg cgaactgctc
    12541 cgcctcgtcc atatcgaatg catcgatttg gcgaaagtca acaaaaaaga tatggaaatc
    12601 gccgccctgt tgaaaaaaca ccatcccgac ctgtatgccg aattgtccaa acagaccaag
    12661 tccgaaagaa aaaaacaaag ttaaaccgca acctccggat gcccgacagt ttttcatttc
    12721 cgaaaaacgc aaacaatgcc gtctgaaaca ccggacaggc cgccgtatcc cgcctgccgc
    12781 ccctgcctca aaccgccgaa ccgcccgaac ccgccttttt acaaacttta tccaatttcc
    12841 tgtttatttc aggatacgcc gacattagaa tgtcaaacag ctcgaaacgg gcaaactcca
    12901 catccatcca aaggaataaa aatgaaactt ctgaccaccg caatcctgtc ttccgcaatc
    12961 gcgctcagca gtatggctgc tgctgccggc acgaacaacc ccaccgttgc caaaaaaacc
    13021 gtcagctacg tctgccagca aggtaaaaaa gtcaaagtaa cctacggctt caacaaacag
    13081 ggtctgacca catacgcttc cgccgtcatc aacggcaaac gtgtgcaaat gcctgtcaat
    13141 ttggataaat ccgacaatgt ggaaacattc tacggcaaag aaggcggtta tgttttgggt
    13201 accggcgtga tggatggcaa atcttaccgc aaacagccca ttatgattac cgcacctgac
    13261 aaccaaatcg tcttcaaaga ctgttcccca cgttaatcag gcaacaaaaa acagcgtttt
    13321 cagaaatgaa aacgctgttt ttttgaccgt tccattattc gcaaaaggga aaaaacgatt
    13381 acctgccccg tgtatcaaaa cctgccctgc cggatgaagg gcataaccgg cagggacggc
    13441 gtcaacacca tatgggggta cggcttttct tgaaagattc ggcttaaata tccaatactt
    13501 tcgcggtata ggcgataatt tcatccgccc tttcagggtt ttcgttcaac ttgatgccgt
    13561 aacccggtac cagctctttc agacggtctt cccaagacgg ggcgcgctcg gggaagcatt
    13621 ggtgcatcag ccggatcatc agcggcacag cggtcgatgc gcccggcgac gcgcccagca
    13681 atgcggcgag tgagccgtcg gcgtgggcga caatctccgt accaaactgg agcacgccgc
    13741 ctttttcgga gtctttttta atgatttgga cgcgttgccc tgcggtgatg agttcccagt
    13801 cgtcggggtt tgcctcgggg tagtattcca gcagggaggc gaagcgttct tctttggttt
    13861 tacgcaattc gcccagcagg tatttggtca gcggcatatt cgcccagccg gcgcacagca
    13921 taggatagag gttgtccata tggatggaca gcggcaaatc cataagcgag ccttgcttga
    13981 ggaagttgga acggaagcct gcgtaagggc cgaacataag gtggcgtttg ccgtccacgt
    14041 tgcgtgtgtc gaggtgcggg acggacatcg gcggcgcgcc gacggaagcc tgcccgtaca
    14101 ctttggcgtt gtgttgttcg gcggtttcgg ggttgctgtt gcggaagaac aggccggaca
    14161 cggggaagcc gccgtagcct ttgccttcgg ggatgccgga tttttgcagc agggtcagcg
    14221 cgccgccgcc cgcgccgagg aagaggaagc gggtacggag ggtgagctgc ccgtcggggt
    14281 tgcgggtatc ggcggttttg agcacccacg cgccgtcgga ttcgcgtttg atgtcttcga
    14341 cgtggcggtt gaactcggtt tttacgccct tgccctgcaa atatttcacc atttggcgcg
    14401 tcagccgtcc gaaatcgaca tccgtacctt cggcggagta gttggcggcg acgggttggt
    14461 tttcgtcccg gccgcgcatc atcagcggag cccaatcgga aattttgttc cgatcggtgg
    14521 aaaattccat attttcaaaa agtttttggg ttttaaacgc gtcataacgt ttttgaagat
    14581 aagaacaatg gtcttcattc atcaccaaag acatatgcgg cacggcattg atgaaggaat
    14641 tgtcttccaa cttgccttcc gcgaccagcg tcgcccaaaa ctggcggctg acatgaaact
    14701 gttcggcaat attgagggcg cgcgccggat cgataatccc atttgcaccc aacggcgcat
    14761 agttcaattc gcacagcgcg gaatgccccg tgccggcgtt gttccacgcg tttgacgatt
    14821 ccaacgccac atcttccaag cgttcaatca gggtgatttc ccaagacggt tcgagttctt
    14881 tgagcaaaac gcccaaagtc gcgctcataa tgccgccgcc caccaagaca acgtctgtcg
    14941 cttcagccat ggtttactcc taaaaaacag gcatcttctg cccttatggt tatttgccgt
    15001 actacaaacg cctgaatcgc aaaagcaggg aaaaccggca atggtgtgtg tccgagtatg
    15061 ctgtttcggg gttggaatgc gttgcaagta tggcttccga caccgcttca ggggcttgta
    15121 atatgttatc gtgaatgtag tggattttac tgggaaatgc aaagtttttc tgtcgcccgc
    15181 caagtcggga aactgcgaaa tgaaaaataa aaatagttat ttatctatat atatcaaatt
    15241 tttaatagat aaaaaatcaa aattgtttat atattaattt ttaaaagatt gtcagcatat
    15301 tgcgttaagt ttt
//
LOCUS       DAWKJW010000031        15132 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.031, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000031 DAWKJW010000000
VERSION     DAWKJW010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15132)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15132)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15132
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.031"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(106..498)
                     /gene="rpsI"
                     /locus_tag="WJJ54_000722"
     CDS             complement(106..498)
                     /gene="rpsI"
                     /locus_tag="WJJ54_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEZ7341614.1"
                     /translation="MNGKYYYGTGRRKSSVARVFLIKGTGQIIVNGRPVDEFFARETS
                     RMVVRQPLVLTENAESFDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAG
                     FVTRDAREVERKKPGLRKARRAKQFSKR"
     gene            complement(508..939)
                     /gene="rplM"
                     /locus_tag="WJJ54_000723"
     CDS             complement(508..939)
                     /gene="rplM"
                     /locus_tag="WJJ54_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEZ7341615.1"
                     /translation="MKTFSAKPHEVKREWFVIDAQDKVLGRVAAEVASRLRGKHKPEY
                     TPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQEQFPGRALE
                     QAVKGMLPKGPLGYAMIKKLKVYAGAEHAHAARQPKVLELK"
     gene            complement(1117..1296)
                     /gene="ssrS"
                     /locus_tag="WJJ54_000724"
     ncRNA           complement(1117..1296)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="WJJ54_000724"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(1302..1607)
                     /locus_tag="WJJ54_000725"
     CDS             complement(1302..1607)
                     /locus_tag="WJJ54_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEZ7341616.1"
                     /translation="MNIEQVHIEVMHARLTVNTPAEEKDTLLQAVGMLNGKAEAIREG
                     GRVADSEKIVIMAALNVVHDLLKTSLNGGDLAIGDFARKIADMDNACQKALSRLAQE"
     gene            complement(1618..1947)
                     /locus_tag="WJJ54_000726"
     CDS             complement(1618..1947)
                     /locus_tag="WJJ54_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341617.1"
                     /translation="MKQNIEKLESSVYTLVQKFETLVSENRRLKETVAELKRAHERQK
                     LEHETAVDELSEALLVQVGKLKEDLQNKIDSLTEENTRYRSLLEQSREKISALAARLP
                     QWQETQQ"
     gene            complement(2002..2991)
                     /locus_tag="WJJ54_000727"
     CDS             complement(2002..2991)
                     /locus_tag="WJJ54_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEZ7341618.1"
                     /translation="MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARE
                     NKRGLPGFSFPETLEVCADLADALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLA
                     ACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
                     ELVPQLNTTVMRLYGSTDVIGVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLA
                     EITRLASAMGAQPKTMMGLAGIGDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGH
                     VSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVERLMERSARFE"
     gene            complement(3114..5816)
                     /gene="ppc"
                     /locus_tag="WJJ54_000728"
     CDS             complement(3114..5816)
                     /gene="ppc"
                     /locus_tag="WJJ54_000728"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HEZ7341619.1"
                     /translation="MQLHILNNPKDAALAADAEFLKQSLFNLLHEEASPLVVETVKLL
                     STSDDSAALIEKVLPQLDEQQTHDLTLACGLFAQILNIAEDVHHERRRQIHEEAGRGG
                     AEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAVLTAHPTEVQRQTVLNFNRRIRALL
                     PQRERCTNADALARLRREIDTILLGLWQTSETRRHKLSVNDEINNGVSIFPMSFFEAL
                     PKLYRKMEHDFQTAYPDVRVPDILKIGGWIGGDRDGNPFVSAETLRFAFRRHADAVFR
                     FYRGELDKLYRELPLSIRRVKVNDDVMALAALSPDEEIARTEEPYRRAIAYIMARAMG
                     KARALGLGMGCKFGFLEPYASAQEFLDDLKKLQRSLIDNGSRLLAEGRLADLIRSVSV
                     FGFHMMPLDLRQHAGKHADVVAELFQHAGLEDYNSLSEEQKQAVLLRELSHQRPLYSP
                     FITYSDHTRHELAIFNEARKIKDEFGEDAVTQSIISNCEQPSDLLALALLLKESGLLA
                     VENGKPHSRINIVPLFETIEALENACPVMETMFRLDWYDALLESRGNIQEIMLGYSDS
                     NKDGGYVTSSWCLYQAELDLVELFKKYDVRMRLFHGRGGSVGRGGGPSYQAILAQPAG
                     SVAGQIRITEQGEVITAKYADPGNAVRNLETLVAATLEASLLPDQKDPEPALMQALSD
                     VSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPASRKTLARIQDLRAIPWVFSW
                     MQNRLMLPAWYGFGSAVETLCEDKPETLAALREHAQSNPFFQAMLSNMEQVMAKTDIT
                     LAENYAGLSESPEKAAVIFGMIKEEYQRSRKALLDLLQTEELLRDNRSLARSLALRIP
                     YLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG"
     gene            5859..6752
                     /locus_tag="WJJ54_000729"
     CDS             5859..6752
                     /locus_tag="WJJ54_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HesA/MoeB/ThiF family protein"
                     /protein_id="HEZ7341620.1"
                     /translation="MPHPCQTVHTLTARVPKCRLKLNAARRQRYNRPQLFFPNIIMTT
                     TEHDNDDELLLRYSRHILLDEIGIEGQQKLSDAHILVVGCGGLGAAALPYLAASGVGT
                     LTIADFDTVELHNLQRQVAFNEGDVGKLKTEALADRLRHINHTVDVRAVNEKLDGCRL
                     TGLVQAADIVLDCCDNYATRQAVNRACVHTKTPLVSGAAVRFEGQLAVYRPDLPDSPC
                     YACLFDGGSASDGICSLFGVFSPLVGIIGSTQAAEALKILLDAGEPSHGRLAVYRALE
                     GGWQYFDLPRNPECPVCGAER"
     gene            complement(7168..7392)
                     /locus_tag="WJJ54_000730"
     CDS             complement(7168..7392)
                     /locus_tag="WJJ54_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein SlyX"
                     /protein_id="HEZ7341621.1"
                     /translation="MDAVQELEHRITELEIQSALQEDVIAGLNAMVAELRQTLDLQQA
                     QLRLLYQKMQDRNPDTQEPYSLRDEIPPHY"
     gene            complement(7393..8781)
                     /locus_tag="WJJ54_000731"
     CDS             complement(7393..8781)
                     /locus_tag="WJJ54_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HEZ7341622.1"
                     /translation="MNAVVVAVIVMLVLSLSRVHVVLSLTVGAFVGGAVAGMPLQNIA
                     DAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFAMAITHSGLPQQLAGAVVRKLNR
                     GGMPDSVRSGEGAVKWLLLSIILVMGIMSQNIIPIHIAFIPMIVPPLLLVFNRLKIDR
                     RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPAL
                     GMLTGLLLAFVHYRKPRLYQSNNADTAGNADAANRPQPSAYRSLAAAAAIAVCFAIQL
                     MYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGFIMIAAQGFAAVMNA
                     TGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCVGL
                     GFSPLATVAIVGTAGALGDAGSPASDSTLGPTMGLNADGQHDHIRDSVIPTFIHYNIP
                     LLIAGWIAAMVL"
     gene            complement(8867..9688)
                     /gene="prmC"
                     /locus_tag="WJJ54_000732"
     CDS             complement(8867..9688)
                     /gene="prmC"
                     /locus_tag="WJJ54_000732"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEZ7341623.1"
                     /translation="MTFDKWLGLSKLPKNEARMLLQYVSEYTRVQLLTRGGEEMPDEV
                     RQRADRLAQRRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLARLPEN
                     GRVWDLGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGARVEFAHGSWF
                     DTDMPSEGKWDIIVSNPPYIENGDKHLLQGDLRFEPQIALTDFSDGLSCIRTLAQGAP
                     DRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTLGKYMKHLK"
     gene            complement(9678..10139)
                     /locus_tag="WJJ54_000733"
     CDS             complement(9678..10139)
                     /locus_tag="WJJ54_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341624.1"
                     /translation="MQEQNRKPSFPIVMLLVSVALWIASLSNVAFYLGNHGSMEGLTV
                     LILGSIFASLDIRYCAVYANYVWLAAIVLLALRKKVVPVHAAFWGLALVAFSVKAVYV
                     DEAGNTSDIVRYGAGFYLWYAAFAVASIGTFAGKNKERKAASAADGTKNDV"
     gene            complement(10204..11688)
                     /gene="tldD"
                     /locus_tag="WJJ54_000734"
     CDS             complement(10204..11688)
                     /gene="tldD"
                     /locus_tag="WJJ54_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HEZ7341625.1"
                     /translation="MPYNQAPDFLCADTMHPTYSAVQARLLEANRLSPELLAKSLCII
                     GAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCI
                     DSINRSARAVRAIGAAGGKVSAKMPSETRGKPVCSASDPIAGLDSAAKVALLNKVEAI
                     AKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRLNVTVIAKQGERREQGSA
                     GGGGRYDLAYFDENLVRQFVDAAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAV
                     GHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGDIASRRGSLNIDDEGNETRRTVL
                     IEDGILVGYMQDETNARLTGTQSTGNGRRESYASAPMPRMTNTFMENGSYEPEEIIAS
                     IDKGIYAVNFGGGQVDITGGKFVFSASEAWWVEGGRLQYPVKGATIIGNGPEVLKHVS
                     MIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSEI"
     regulatory      11763..11867
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            11934..13157
                     /gene="cytX"
                     /locus_tag="WJJ54_000735"
     CDS             11934..13157
                     /gene="cytX"
                     /locus_tag="WJJ54_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HEZ7341626.1"
                     /translation="MSGNASSPSSSAAIGLIWFGAAVSIAEISTGTLLAPLGWQRGLA
                     ALLLGHAVGGALFFAAAYIGALTGRSSMESVRLSFGKRGSVLFSVANMLQLAGWTAVM
                     IYAGATVSSALGKVLWDGESFVWWALANGALIVLWLVFGARKTGGLKTVSMLLMLLAV
                     LWLSAEVFSTAGSTAAQVSDGMSFGTAVELSAVMPLSWLPLAADYTRHARRPFAATLT
                     ATLAYTLTGCWMYALGLAAALFTGETDVAKILLGAGLGAAGILAVVLSTVTTTFLDAY
                     SAGASANNISARFAETPVAVGVTLIGTVLAVMLPVTEYENFLLLIGSVFAPMAAVLIA
                     DFFVLKRREEIEGFDFAGLVLWLAGFILYRFLLSSGWESSIGLTAPVMSAVAIATVSV
                     RLFFKKTQSLQRNPS"
     gene            13154..14254
                     /locus_tag="WJJ54_000736"
     CDS             13154..14254
                     /locus_tag="WJJ54_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEZ7341627.1"
                     /translation="MTRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYV
                     AAAMLAPAAEAVEATPEVVRLGRQSIPLWRGIRCRLNTHTMMQENGSLIVWHGQDKPL
                     SSEFVRHLKRGGVADDEIVRWRADDIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
                     ADALDELNVPCHWEHECAPEDLQAQYDWLIDCRGYGAKTAWNASAEHGSTLRGIRGEV
                     ARVYTPEITLNRPVRLLHPRYPLYIAPKENHVFVIGATQIESESQAPASVRSGLELLS
                     ALYAVHPAFGEADILEIATGLRPTLNHHNPEIRYSRKRRLIEINGLFRHGFMISPAVT
                     AAAVRLAVALFDGKDAPERDEESGLAYIRRQD"
     gene            14275..14892
                     /gene="thiE"
                     /locus_tag="WJJ54_000737"
     CDS             14275..14892
                     /gene="thiE"
                     /locus_tag="WJJ54_000737"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEZ7341628.1"
                     /translation="MTFLPLKSPLKFYAVVPTADWVERMVEAGADTVQLRCKALHGDE
                     LKREIARCAAACRGSRTQLFINDHWREAIEAGAYGVHLGQEDMDTADLAAIAAAGLRL
                     GLSTHSVAELDRALSVHPSYVASGAIFPTTTKQMPTAPQGLEKLREYVKQAGSTPVVA
                     IGGIDLNNARAVLATGVSSLAAVRAVTEAANPEAVVKAFQALWDG"
BASE COUNT         3143 a         4296 c         4230 g         3463 t
ORIGIN      
        1 tgtttttgat ttttgcccaa tctgtaatct ttagattgcc aatgggaaac cgtctactac
       61 aaataaaaaa ccctgcgata agcagggttt tttgaatttc caacattaac gtttggagaa
      121 ttgttttgca cggcgtgctt tgcgcagacc cggtttttta cgttcgactt cgcgggcatc
      181 gcgggtaaca aaaccagctt gagacaaggc gggtttcaac gcggcatcga agtcgatcag
      241 ggcacgggta atgccgtggc ggattgcgcc ggactggccg gtttcgccgc cgccaacaac
      301 attgactttg atgtcgaaag attcggcgtt ttcagtcaga accaagggtt ggcgaacaac
      361 cattcggctg gtttcgcgtg cgaagaattc gtcaacggga cggccgttta cgatgatttg
      421 acctgtacct ttaatcagga atacacgagc cactgaactt ttgcggcggc ctgtgccgta
      481 gtagtattta ccgttcatgt cgcgtcctta tttcagttcc aaaactttgg gttgtcgcgc
      541 agcatgggcg tgttccgcac ccgcatacac tttcagtttt ttaatcatgg cgtaacccaa
      601 aggacctttg ggcagcatac cttttacagc ttgttccaaa gcgcggcccg ggaattgctc
      661 ttgcatttcg cggaaagtgc gttcgtagat accgcctggg aaaccggaat ggcggaagta
      721 ttttttatct tcgaatttgg caccggttac acgcagtttg tccgcattga taacaatgat
      781 gtaatcgccg gtatcgacgt ggggggtgta ttcaggtttg tgtttgccac gcagacggct
      841 ggcgacttcg gccgcaacgc gacccaagac tttgtcttgg gcatcgatga cgaaccattc
      901 gcgcttcacc tcgtggggtt tcgctgaaaa ggttttcata gtggaaatcc agatagatat
      961 agaaagttgt aaattttaaa gacaggattc gattttgtca atcgcattac cgcgttacgg
     1021 aaggattttc cggatttcgg cagactgcat actgcttttt cgggcggggc ggcggccaat
     1081 gtgaaaaacc gcatcgttgc gatgcggttt tgaatgggaa tccccgcgag agccgtttcg
     1141 gccgaatccg cttgaacctt gctgacaagg cggctgcctc gggtagtttc gggtgcgtcc
     1201 gcaaaaggac gctcgcgccc actactgctc ccggcaacct taagcgaact tattggttca
     1261 aaggaatata tgccttcgcg gacaccgcag ggaaaaaggg gttattcctg cgccaagcgg
     1321 gatagtgctt tttggcaggc gttgtccata tcggctattt tacgcgcaaa atcgccgatt
     1381 gccaaatcgc cgccgttcag agaggttttc aacaggtcgt ggacgacgtt gagcgcggcc
     1441 ataatgacga ttttttcgct gtccgcgacg cgtccgcctt cgcggatggc ttcggctttg
     1501 ccgttgagca ttccgactgc ctgcaacagt gtgtcttttt cttctgccgg cgtgttgacg
     1561 gtcagccggg cgtgcatgac ttcgatgtgg acttgttcga tgttcatcct ttaatcctta
     1621 ttgctgcgtt tcctgccatt gggggaggcg cgctgccagt gcgctgattt tttccctgct
     1681 ctgttcgagc aggctgcggt atcgtgtatt ttcttctgtc aggctgtcga ttttgttttg
     1741 caggtcttct ttgagtttgc cgacttggac gagcagggct tcgctgagtt cgtcgacggc
     1801 ggtttcgtgt tcgagttttt gccgctcgtg cgcccgtttg agttcggcga cggtttcttt
     1861 gaggcggcgg ttttcgctga cgagggtttc gaatttttgt accagcgtat aaacgctgct
     1921 ttcgagtttt tcgatatttt gtttcataac cttacctgtc cgtatgccgt ctgaaggctt
     1981 cagacggcat ctgtctgttg tttattcgaa acgcgcgctg cgttccatca gtctttcgac
     2041 gacctgctga ggggtcattt ccttacggat gagttgcagc agggtttggg taatcggcat
     2101 atcgatttgg tacttacagg cagtattgaa gacttcttct atcgtgctga ccccttcgga
     2161 aacgtgtccg atttcgacca gcacctgatg cagttccttg ccttctgcca aacccaagcc
     2221 gacgcggcgg ttgcgtgaga gtgcgccagt gcaggtcaag atgaggtcgc cgatgcctgc
     2281 cagccccatc atggttttgg gctgtgcgcc cattgcggag gcaaggcggg taatttcagc
     2341 taatccgcgc gtaaccagtg cggcacgggc gttaagcccg tactctaggc catcggacaa
     2401 tccggtggca atcgccataa cattttttac cgcgccgcca accgccacgc cgataacgtc
     2461 ggtactgccg taaagcctca tgacagtcgt gttgagctgc ggtacgagtt cttcaatcca
     2521 ctcttggttt tcggaggcga ggacgacggc acagggcagt tgtttggcga gttcctgtgc
     2581 aaaactcggg ccggagagta cgccgatttt cttattgtcg ggcaatactt ctttcaatac
     2641 ttgaaaggtc agcagccctg tatcctgctc gaatcctttg caggcggcga ggacggggag
     2701 gtgtcccgcg ccgtactgtt tgagcagctc tgcgctgctt ctcaatccgg caacggaggt
     2761 tacgataagg acaagtccgc tgtctttgag cgcgtctgcc aaatccgcac acacttccaa
     2821 ggtttcggga aaggaaaagc cgggcagtcc gcgtttgttt tcacgcgctt cctgcatttg
     2881 gcggacttgg tctgcgttgc gcgtccacag ggatacgcgg ttgccgtgtt gggaaaagtg
     2941 cagggcgagc gccgtacccc acgaacctgc gccgataacg gtaattttca ttggtcgtct
     3001 ttcaacatat cactgccgtt cactttaaaa caatcggtgt ttctctgcaa gtgcggtcag
     3061 ggaaatgccg tctgaaaggt gttcagacgg cattttgccc cgatgcggca caatcagcct
     3121 gtattgcgca aaccttgcgc cacgccgttg atggtcaggt gaaccatcag cagcgcgtgc
     3181 ggattgtcgg gttctttacg caggcgtttg agcatggcga cctgcaggcc gttgagcgcg
     3241 ttcaaatatg gaatcctcaa ggcaagcgaa cgggcgaggc tgcggttgtc gcgtaaaagt
     3301 tcttcggttt gcagcaggtc gagcagggct ttgcggctgc gttggtattc ttccttaatc
     3361 atgccgaaga tgacggcggc tttttccggc gattcgctca agccggcata gttttccgcg
     3421 agggtgatgt cggttttcgc catcacttgc tccatattgg aaagcatggc ttggaagaac
     3481 gggttgcttt gggcgtgttc gcgcagggcg gcgagcgttt cgggtttgtc ttcgcacaag
     3541 gtttccaccg cgctgccgaa accgtaccaa gcaggcagca tgaggcggtt ttgcatccat
     3601 gagaataccc acggaatagc gcgcaagtcc tgaatccgcg ccaaggtttt gcggctggca
     3661 ggacggctgc cgaggttgag ggtggcaatt tcctgaatcg ggctggtttg caggaagtag
     3721 tcgatgaagt cagggtgggt aatcagttcg cggtagtatt tgaacgatac gtccgacaat
     3781 gcctgcatga gcgcaggttc ggggtctttt tgatcgggca gcaggctggc ttcgagtgtt
     3841 gcggcaacaa gggtttcgag attgcgcacg gcattgcccg ggtcggcgta tttggcggta
     3901 atgacttcgc cttgctcggt gatgcggatt tgtccggcca cgctgcctgc cggttgggcg
     3961 agaatggctt ggtaagacgg gccgccgccg cgtccgacgc tgccgccgcg tccgtggaac
     4021 aggcgcatgc ggacatcgta ttttttgaag agttcgacca agtccaattc cgcctggtag
     4081 aggcaccatg agctggtaac gtagccgccg tccttgttgg agtcggagta gcccagcatg
     4141 atttcttgga tattgccgcg gctttcgagc aaggcatcgt accaatcgag gcggaacatg
     4201 gtttccatga ccggacaggc gttttcgagt gcttcgatgg tttcaaacag cggcacgata
     4261 ttgatgcggc tgtgcggttt gccgttttcc accgccaaca ggccgctttc tttcagcagc
     4321 aatgccaagg cgagcaggtc gctgggttgt tcgcagttgg aaataatgct ttgtgttacg
     4381 gcatcttcgc caaattcgtc tttgattttg cgcgcttcgt tgaaaattgc cagttcgtgg
     4441 cgggtatggt cgctgtatgt gatgaacggg ctgtacagcg gacgttgatg actcaattcg
     4501 cgcaacagga cggcttgttt ctgctcttcg gagaggctgt tgtagtcttc caggccggcg
     4561 tgttggaaaa gctcggcaac cacatcggcg tgtttgcccg cgtgttggcg caaatcaagc
     4621 ggcatcatat ggaagccgaa cacggatacg gagcggatga ggtctgccag acggccttcg
     4681 gcaagcaggc ggctgccgtt gtcgataagg gaacgttgca gttttttcaa atcatcgaga
     4741 aattcttgtg ccgaagcata aggctcgaga aagccgaatt tgcagcccat acccaaaccg
     4801 agcgcgcgcg ctttgcccat agcgcgcgcc ataatgtagg cgatggcgcg gcggtagggt
     4861 tcttccgtgc gggcgatttc ttcgtcaggc gagagggctg ccagtgccat tacgtcgtcg
     4921 ttgactttga cgcggcggat ggagagcggc agttcgcggt aaagtttgtc gagttcgccg
     4981 cgatagaaac ggaacacggc atcggcgtgg cggcggaagg caaagcgcag ggtttcggca
     5041 gaaacaaacg gattgccgtc gcggtcgccg ccgatccagc cgccgatttt gaggatgtcc
     5101 ggaacgcgga catcgggata ggccgtctga aagtcgtgtt ccatcttgcg gtagagtttg
     5161 ggtagggctt cgaaaaagct catcgggaag atggacacgc cgttgttgat ttcgtcgttg
     5221 acgctgagtt tgtggcggcg cgtttcgctg gtctgccaca agcccagcag gatagtgtcg
     5281 atttcgcggc gcagccgtgc cagcgcgtcg gcattggtgc agcgttcgcg ttgcggcagc
     5341 agcgcgcgga tgcggcggtt gaaattcaaa acggtttggc gttgcacttc ggtcgggtgc
     5401 gcggtcaaaa cggcggtaac ggacgtattg tccaactgcc gctgcaccga tttgccgtcg
     5461 gctttccccg ctttgagcct gcggacggtt tccgtcaggc tgccttccgc gccgccgcgt
     5521 ccggcttctt cgtggatttg gcggcggcgt tcgtggtgca cgtcttcggc gatgttcaaa
     5581 atctgtgcga acaggccgca ggccaaggtt aaatcgtggg tttgttgttc gtccaattgc
     5641 ggcaatactt tttcaatcaa tgccgcgctg tcgtcggaag tggacaagag tttgaccgtt
     5701 tcgacaacca acggcgaggc ttcttcgtgc aggaggttga acagggattg tttcagaaat
     5761 tccgcgtccg ccgccaaagc cgcgtccttt ggattgttca gaatatgcag ttgcatgatt
     5821 tttctctcat tgccgtaaat actgtaaatg tacctcaaat gccgcatccg tgccaaaccg
     5881 ttcacacttt aaccgcccgt gtcccgaaat gccgtctgaa gttgaacgcc gcccgacggc
     5941 agcgttacaa tcgcccgcaa ctgttttttc cgaacatcat catgaccacg accgaacacg
     6001 acaacgacga cgaactcctg ctgcggtaca gccgccacat cctcttggac gaaatcggca
     6061 tcgaagggca gcaaaagctt tccgacgcac atattttggt cgtcggatgc ggcggtttgg
     6121 gtgccgccgc actgccctac cttgccgctt cgggtgtcgg cacgctgacc atagccgatt
     6181 tcgacacggt cgaactgcac aacctgcaac gtcaggtcgc atttaacgag ggcgacgtcg
     6241 gcaaactcaa aaccgaagcc ttggcagacc gtctgcgcca tatcaaccat accgtcgatg
     6301 tccgcgccgt caacgaaaaa ctcgacggct gccgcctgac cggtttggtt caagccgccg
     6361 acatcgtttt agactgctgc gacaactacg ccacgcggca ggcggtcaac cgtgcctgcg
     6421 tgcacacgaa aacaccgctg gtttcagggg cggcggtacg ctttgaagga caacttgccg
     6481 tgtaccgtcc cgacttgccc gactcgccgt gttacgcctg cctgtttgac ggcggatcgg
     6541 cttcagacgg catctgttcc ctcttcggcg tgttctcgcc gctggtcggc atcatcggca
     6601 gtacccaagc ggcggaagct ctgaaaatcc tgctggatgc gggcgaaccg tcgcacggca
     6661 ggctggcggt ttaccgtgcc ttggaagggg gctggcaata tttcgacctg ccgcgcaacc
     6721 ccgaatgccc ggtttgcggc gcggaacggt aaaaccctgc caccgtttca gacggcatcc
     6781 aaacggatgc ggcggaacgg ttttaaaaat ttaaaaattt acatttcttt gcaaaaaaaa
     6841 aaaaaaaaaa aaaaaataaa cttaccttat aattgcaatt gttttagcaa tgtctgtttc
     6901 gcagactcat tgagtaagac gttttccccg taatgtgttt ggccgtctgt cccctttggg
     6961 ttcggacggc tttttttttg gctgtgtatg aatacccggt tggttttatc tgtttacagg
     7021 ggaaaaccgc ttatttccgt tcgggcggaa aacggttcca tcggataaaa ggcattttgt
     7081 ccgactgatt aaagttacat cttaggtttg catcggcgga atattcaaac acagcctttt
     7141 ttaaggaaat ccggatacgg cggcacatca ataatgcggc ggaatctcgt cgcgcaggga
     7201 atacggctct tgcgtgtcgg gattcctgtc ctgcattttt tgatacagca gcctcaactg
     7261 agcctgctgc aaatccagcg tctgccgcaa ttccgccacc atcgcgttca ggccggcgat
     7321 tacgtcctcc tgaagcgcgg attggatttc cagctctgtg atgcggtgtt ccaactcttg
     7381 aaccgcgtcc atttacagca ccatcgcggc aatccagccg gcaatcagca gcgggatatt
     7441 gtagtggatg aaggtcggga taacggaatc gcggatgtgg tcgtgctgcc cgtcggcgtt
     7501 cagccccatc gtcgggccca gcgtggaatc ggacgcaggc gaaccggcat cgcccaacgc
     7561 ccccgccgtg ccgacaatgg cgacggtggc aagcggcgaa aaacccaaac cgacacacaa
     7621 aggcacataa atcgcggcaa taatcggcaa agtggaaaag gacgaaccga tgcccatcgt
     7681 taccaaaagc cccaccacca gcatcgccaa tgccgccata cctttgctgt tgccgaatat
     7741 cgccatactg ctttccacca gcggctggat atgcccggtc gcattcatca cggcggcaaa
     7801 accctgcgcg gcaatcataa tgaagccgac catcgccatc atcttgatac cttcgccgaa
     7861 tacgtcgttt gccttgtcgc ggttgatgac ccccaacatc ataaatacgg cgaaaccgag
     7921 catcgcgccc aacaccagcg agtcttcata catcaactgg atggcaaaac atacggcaat
     7981 ggcggcggcg gcggccaggc tgcggtaggc ggacggctgc ggacggtttg ccgcatcggc
     8041 gttgcccgcc gtatcggcat tgttgctttg gtacaggcgc ggtttgcggt aatggacaaa
     8101 cgccagcagg agtccggtca gcattcccaa cgcgggaatc gccattgccg ccattacgtt
     8161 gatgtttttc acatcaagct gcggcgcggc ggaatggatg ttgcccaaca ggatttcgtt
     8221 caaaaaaatc gcgccgaagc cgtaaggcag gaacatataa gtcgtaacca gcccgaaagt
     8281 aatgacgcac gcaatcagac ggcggtcgat tttcaggcgg ttgaacacca aaagcagcgg
     8341 cggaacaatc atcgggataa aggcgatgtg gataggtatg atgttctgac tcataatgcc
     8401 catcacaagg atgatggaaa gcagcagcca tttgaccgcg ccctcgcccg aacgcacgct
     8461 gtcgggcata ccgccccggt tcagcttgcg gacgaccgcg ccggcaagct gctgcggcag
     8521 gccggaatgg gtaatcgcca ttgcaaacgc gccgagcatc gcataagaaa gcgcaatctt
     8581 cgcaccgcct tccaaacctt tgttgaacac ggggataatc cccgcctgac tgacctgtcc
     8641 cgccgcatcg gcaatgtttt gcagcggcat acccgccacc gcgccgccga caaacgcgcc
     8701 gaccgtcagg ctcaatacca cgtgcacgcg cgacagcgac agcaccagca taacgattac
     8761 ggcaactacg actgcattca ttgtttatcg ctccaaacct ataaatgttt acatatcgaa
     8821 acacatcata acccaataat ggaaaacccg ccaattttgc aaacaattat ttcaaatgct
     8881 tcatatactt ccccagcgta accctgtcca aacccgccaa gtccggcagg gtttccactc
     8941 ctgaaaaacc attctccgcc aacacgccgc gcaccgccgc gccctgatcg aaaccgtgtt
     9001 ccaacaacaa aaaaccgcct tccgccaaac ggtcgggcgc gccttgcgcc aaggtgcgga
     9061 tgcagcttag gccgtctgaa aagtcggtca gcgcgatttg cggctcaaac cgcaaatcgc
     9121 cttgcaacaa atgtttatcg ccgttttcga tatagggcgg gttggacacg atgatgtccc
     9181 atttcccttc agacggcata tcggtgtcga accacgaacc gtgtgcaaat tcgacccgcg
     9241 cgcccaaatc cgccgcattt ttccgcgccg tttcaagggc gggcgggctg atgtcggatg
     9301 cgcgcacaaa cgcatcgggg cgttcgagtg cgacggttac ggcaaccgcg ccgctgcccg
     9361 tccccaaatc ccacacgcgc ccgttttcgg gcaggcgcgc caatacggct tcgaccaaat
     9421 gttcggtttc ggggcgcgga atcagcacgt tcgggttgac tgtaaagcgt ctgccataaa
     9481 attcgcgcac acctaaaata taggcaaccg gctcgccgtt cagacggcgt tgcgccagcc
     9541 tgtccgcccg ctgtcggact tcgtccggca tttcttcccc accccgcgtc aacaactgca
     9601 cgcgcgtata ttccgaaaca tattgcagca gcattcttgc ttcattttta ggcagttttg
     9661 acaagcccaa ccatttatca aacgtcattt ttcgtcccgt ctgccgccga tgcggctttt
     9721 ctttccttat tctttccggc aaacgtaccg atggaggcaa ccgcaaatgc ggcataccac
     9781 aaataaaatc ctgcaccgta gcgcacaata tccgatgtat tccctgcttc atcgacgtat
     9841 acggctttca cactgaaagc caccaacgcc aagccccaaa atgccgcatg gacaggcacg
     9901 accttcttcc gcaacgccag caaaacaatg gccgccaacc aaacataatt cgcatagacc
     9961 gcacaatacc tgatatccaa agaagcaaat atcgacccca aaatcaaaac ggtcaaaccc
    10021 tccatgcttc catgattgcc caaataaaat gcaacattgg ataaagacgc tatccacagg
    10081 gcaaccgaca ccagcaacat cactatggga aaacttggtt tccgattctg ttcctgcatg
    10141 gttttatcct aatgtaaaag gccgtctgaa aacctttcag acggcatcgt gccggattct
    10201 gcgtcagatt tcgctaccgc cgacggtcag tccggcatca atccgcaaag tcggttgccc
    10261 cacgccgacg gggacgctct gcccttcttt gccgcacacg ccgacaccgc tgtccaacgc
    10321 ggtatcgttg cctatcatcg aaacgtgttt cagcacttcg ggcccgttgc cgataatggt
    10381 cgcgcctttg acggggtatt gcagcctgcc gccttccacc caccatgctt cggacgcgct
    10441 gaacacaaat ttgccgccgg tgatgtccac ctgtccgccg ccaaagttga cggcgtaaat
    10501 gcctttgtcg atggacgcga tgatttcttc cggctcatag ctgccatttt ccataaaggt
    10561 attggtcatg cgcggcatag gggcggaagc gtaactttcg cggcggccgt tgccggtgga
    10621 ttgcgtaccc gtcaggcggg cattggtttc gtcctgcata tagccgacta aaatgccgtc
    10681 ttcaatcaat acggtgcggc gggtttcgtt gccttcgtcg tcgatgttga gcgaaccgcg
    10741 ccggctggca atatcaccct gatccacaac ggtaacgcct ttggcggcga cgcgctcgcc
    10801 tattctgccg gaaaagacgc ttgtcccctt gcggttgaaa tcgccttcca aaccgtgtcc
    10861 gaccgcttcg tgcagcaaca cgcccggcca gccgttgccc aaaacgacgg tcatttcgcc
    10921 agcgggcgcg gggcgggatt cgaggttggt gagtgcctgt ttgacggcgg catcgacaaa
    10981 ctgccgcacc aagttttcat cgaaataagc caagtcgtag cgtccgccgc cgcccgcgct
    11041 gccctgttcg cggcgttcgc cctgtttggc gataacggta acgttcaggc gcaccatcgg
    11101 gcggatgtcg gcggcgtgtt tgccgtccag acgggcgagg taaaccatat cgtattcgca
    11161 ggtcaaaccg gccatcactt gcacgatgcg cggatcggcg gctttggcga ttgcttccac
    11221 tttgttcaac agcgcgactt tggcggcgga atcgaggccg gcaatggggt cggacgcgga
    11281 acaaaccggc ttgccgcgcg tttcagacgg cattttggcg gacaccttgc cgcctgccgc
    11341 cccaatcgcg cggacggcgc gggcggaacg gtttatcgaa tcgatgcaca ggctgtcggc
    11401 gtaggcaaag gcggttttat cgcccgaaac ggcgcgcacg cccacgccct gattgatttg
    11461 gaagctgccc gatttgacga tgccctcttc caaatgccag ctttcataag cggtgcgctg
    11521 gcagtagatg tcggcgtaat cgacgtggtg cgcgccgatg atgcacaggc ttttggcgag
    11581 cagttcgggg gaaaggcggt tggcttcgag cagccgcgcc tgtacggcgg aataggtcgg
    11641 atgcatagtg tcggcgcata aaaaatcagg ggcttgatta tacggcattt gttatggaaa
    11701 tgcgccgtgc cgccgaaaat gtaagaattt tgccaacatc ccctgctttt gtgtacactt
    11761 aaagctcctt gtcggagtgc tgcccgccgg gcggctgaga ttgcgaaagc aaaatccgta
    11821 gaacctgtcg gggtaatgcc tgcgtaggaa acaaaccgtc aaatgcctta tcaggcttcc
    11881 gttccctttt ccgcacttcc ccgcccacct tccttctttt taaaggacgt catatgtcgg
    11941 gcaatgcctc ctctccttca tcttccgccg ccatcgggct gatttggttc ggcgcggcgg
    12001 tatcgattgc cgaaatcagc acgggtacgc tgcttgcgcc tttgggctgg caacgcggtc
    12061 tggcggctct acttttgggt catgccgtcg gcggcgcgct gttttttgcg gcggcgtata
    12121 tcggcgcact gaccggacgc agctcgatgg aaagcgtgcg cctgtcgttc ggcaaacgcg
    12181 gttcagtgct gttttccgtg gcgaatatgc tgcaactggc cggctggacg gcggtgatga
    12241 tttacgccgg cgcaacggtc agctccgctt tgggcaaagt gttgtgggac ggcgaatctt
    12301 ttgtctggtg ggcattggca aacggcgcgc tgattgtgct gtggctggtt ttcggcgcac
    12361 gcaaaacagg cgggctgaaa accgtttcga tgctgctgat gctgttggcg gttctgtggc
    12421 tgagtgccga agtcttttcc acggcaggca gcaccgccgc acaggtttca gacggcatga
    12481 gtttcggaac ggcagtcgag ctgtccgccg tgatgccgct ttcctggctg ccgcttgccg
    12541 ccgactacac gcgccacgcg cgccgcccgt ttgcggcaac cctgacggca acgctcgcct
    12601 acacgctgac cggctgctgg atgtatgcct tgggtttggc agcggcgttg ttcaccggag
    12661 aaaccgacgt ggcaaaaatc ctgctgggcg caggtttggg tgcggcaggc attttggcgg
    12721 tcgtcctctc caccgttacc acaacgtttc tcgatgccta ttccgccggc gcgagtgcga
    12781 acaacatttc cgcgcgtttt gcggaaacac ccgtcgctgt cggcgttacc ctgatcggca
    12841 cggtacttgc cgtcatgctg cccgttaccg aatatgaaaa cttcctgctg cttatcggct
    12901 cggtatttgc gccgatggcg gcggttttga ttgccgactt tttcgtcttg aaacggcgtg
    12961 aggagattga aggctttgac tttgccggac tggttctgtg gcttgcgggc ttcatcctct
    13021 accgcttcct gctctcgtcc ggctgggaaa gcagcatcgg tctgaccgcc cccgtaatgt
    13081 ctgccgttgc cattgccacc gtatcggtac gccttttctt taaaaaaacc caatctttac
    13141 aaaggaaccc gtcatgaccc gtatcgccat cctcggcggc ggcctctcgg gaaggctgac
    13201 cgcgttgcag cttgcagaac aaggttatca gattgcactt ttcgataaag gctgccgccg
    13261 gggcgaacac gccgccgcct atgttgccgc cgccatgctc gcgcctgcgg cggaagcggt
    13321 cgaagccacg cccgaagtgg tcaggctggg caggcagagc atcccgcttt ggcgcggcat
    13381 ccgatgccgt ctgaacacgc acacgatgat gcaggaaaac ggcagcctga ttgtgtggca
    13441 cgggcaggac aagccattat ccagcgagtt cgtccgccat ctcaaacgcg gcggcgtagc
    13501 ggatgacgaa atcgtccgtt ggcgcgccga cgacatcgcc gaacgcgaac cgcaactcgg
    13561 cggacgtttt tcagacggca tctacctgcc gaccgaaggc cagctcgacg ggcggcaaat
    13621 attgtctgca cttgccgacg ctttggacga actgaacgtc ccttgccatt gggaacacga
    13681 atgtgccccc gaagacctgc aagcccaata cgactggctg atcgactgcc gcggctacgg
    13741 cgcaaaaacc gcgtggaatg cttctgccga acacggcagc accctgcgcg gcatacgcgg
    13801 cgaagtggcg cgggtttaca cacccgaaat cacgctcaac cgccccgtgc gcctgctgca
    13861 cccgcgttat ccgctctaca tcgccccgaa agaaaaccac gtcttcgtca tcggcgcgac
    13921 ccaaatcgaa agcgaaagcc aagcccccgc cagcgtgcgt tcagggttgg aactcttgtc
    13981 cgcactctat gccgtccacc ccgccttcgg cgaagccgac atcctcgaaa tcgccaccgg
    14041 cctgcgcccc acgctcaacc accacaaccc cgaaatccgc tacagccgca aacgccgcct
    14101 catcgaaatc aacggccttt tccgccacgg tttcatgatc tcccccgccg taaccgccgc
    14161 cgccgtcaga ttggcagtgg cactgtttga cggaaaagat gcacccgaac gcgatgaaga
    14221 aagcggtttg gcgtatatcc gaagacaaga ttaaagccgt ctgaaaggaa ccccatgacc
    14281 ttcctgccac tcaaatcccc gctcaaattc tacgccgtcg tccccaccgc cgattgggtc
    14341 gagcgcatgg tcgaagcagg tgccgacacg gtgcaactgc gctgcaaggc cctgcacggc
    14401 gatgaattga aacgcgaaat cgcccgctgc gccgcagcct gccgtggcag ccgtacgcag
    14461 cttttcatca acgaccactg gcgcgaagcg atagaagcag gcgcgtacgg cgtgcatctc
    14521 ggacaagaag acatggacac cgccgacctc gccgccattg ccgctgccgg tttgcgtttg
    14581 ggtttgagta cgcactccgt cgccgaactc gaccgcgccc tgtccgtgca ccccagctac
    14641 gtcgccagcg gcgcgatttt cccgaccacg accaaacaaa tgcccaccgc ccctcaaggc
    14701 ttggaaaaac tgcgtgaata tgtgaaacag gcaggcagca cgcccgtcgt cgccattggc
    14761 ggcatcgatt tgaacaacgc ccgagccgta ctcgccaccg gcgtttcctc actcgccgcc
    14821 gtccgcgccg taaccgaagc ggcaaatccc gaagcggtgg ttaaagcgtt tcaggctttg
    14881 tgggatggat aaaaccgaaa gaagaaaatt caattgccgt gtaggcaaaa cttagcccgt
    14941 tatcgcaaac atacttaact ttaaatgtag catatcatca aattccgtca ttcccgcgca
    15001 agcgggaatc cgccttaaaa cttgagaaac catcatttga aaaacagttt ccgaatttca
    15061 aaaatggatt cccgcctgcg cgggaatgac ggcaaccggc cggttgcgta tcaaaaaata
    15121 aagtaattcg ac
//
LOCUS       DAWKJW010000032        15092 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.032, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000032 DAWKJW010000000
VERSION     DAWKJW010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15092)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15092)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15092
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.032"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..143)
                     /locus_tag="WJJ54_000738"
     CDS             complement(<1..143)
                     /locus_tag="WJJ54_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HEZ7341629.1"
                     /translation="MSTFFRQTAQAMIAKHINRFPLLKLDQVIDWQPIEQYLNRQRTR
                     YLR"
     gene            316..1725
                     /locus_tag="WJJ54_000739"
     CDS             316..1725
                     /locus_tag="WJJ54_000739"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEZ7341630.1"
                     /translation="MMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAAT
                     EHLGSLGIQVYPGHTAEHVNGADVVVTSTAVKKENPEVVAALEQQIPVIPRALMLAEL
                     MRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVA
                     EADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCI
                     DSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHVQMKGHEQGSFEVV
                     LNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTAL
                     LVDDYGHHPVEMAATLAAARGAYPEKRLVLAFQPHRYTRTRDLFEDFTKVLNTVDALV
                     LTEVYAAGEEPIAAADSRALARAIRVLGKLEPIYCENVADLPEMLLNVLQDGDIVLNM
                     GAGSINRVPAALLELSKQI"
     gene            1839..2753
                     /locus_tag="WJJ54_000740"
     CDS             1839..2753
                     /locus_tag="WJJ54_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEZ7341631.1"
                     /translation="MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDP
                     KETPLSELKAQGFQTAFNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRC
                     KLIWQALGLPVPEFAVLHDDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKEKGRLKS
                     VYEELKHLQGEIIAERFIGGGEYSCPVLNGKGLPGIHIIPATEFYDYEAKYNRDDTIY
                     QCPSEDLTEAEESLMRELAVRGAQAIGAESCVRVDFLKDTDGKLYLLEINTLPGMTSH
                     SLVPKSAAVTGVGFADLCIEILKTAHVG"
     gene            2743..3471
                     /locus_tag="WJJ54_000741"
     CDS             2743..3471
                     /locus_tag="WJJ54_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEZ7341632.1"
                     /translation="MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSL
                     KGNLVYSDKKTLGSLAKEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVV
                     LTERKPVARWGDHALVDGEGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAK
                     QGLGIKEMTYTARSAWIVVLDNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYV
                     DMRYKDGFSVRYASDGLPEKESEE"
     gene            3557..4801
                     /gene="ftsA"
                     /locus_tag="WJJ54_000742"
     CDS             3557..4801
                     /gene="ftsA"
                     /locus_tag="WJJ54_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEZ7341633.1"
                     /translation="MEQQQRYISVLDIGTSKVLALIGEVQDDDKINIVGLGQAPSRGL
                     RAGMVTNIDATVQAIRQAVNDAELMADTKITHVTTGIAGNHIRSLNSQGVVKIKDGEV
                     TQADIDRAIETAKAINIPPDQKILDAVVQDYIIDTQLGVREPIGMSGVRLDTRVHIIT
                     GASTAVQNVQKCIERCGLKSDQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAV
                     YMNGAIRHTSVIPAGGNLITKDLSKSLRTPLDAAEYIKIHYGVASCDTEGLGEMIEVP
                     GVGDRTSRQVSSKVLAAIISARIQEIFGVVLGELQKSGFPKEVLNAGIVLTGGVSMMT
                     GIVEFAEKIFDLPVRTGAPQEMGGLSDRVRTPRFSTAIGLLHAACKLEGNLPQPENGA
                     VQEREVGGGLLARLKRWIENSF"
     gene            4920..6098
                     /gene="ftsZ"
                     /locus_tag="WJJ54_000743"
     CDS             4920..6098
                     /gene="ftsZ"
                     /locus_tag="WJJ54_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEZ7341634.1"
                     /translation="MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRGVEFI
                     SANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANML
                     FITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFAYEGKRVHVAQAGLEQLKEHV
                     DSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVK
                     TVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLK
                     MSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDFVPARE
                     VEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
                     "
     gene            6237..7547
                     /locus_tag="WJJ54_000744"
     CDS             6237..7547
                     /locus_tag="WJJ54_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEZ7341635.1"
                     /translation="MDTSKQTLLDGIFKLKANGTTVRTELMAGLTTFLTMCYIVIVNP
                     LILGETGMDMGAVFVATCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGV
                     PWQVALGAVFISGLIFILFSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGI
                     IVANPATLVGLGDIHQPSALLALFGFAMVVVLGHFRVQGAIIITILTITVIASLMGLN
                     EFHGVIGEVPSIAPTFMQMDFEGLFTVSMVSVIFVFFLVDLFDSTGTLVGISHRAGLL
                     VDGKLPRLKRALLADSTAIVAGAALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLML
                     ACLMFSPLAKSVPAFATAPALLYVGTQMLRSARDIDWDDMTEAAPAFLTIVFMPFTYS
                     IADGIAFGFISYAVVKLLCRRTKDVPPMVWIVAVLWALKFWYLG"
     gene            8173..9048
                     /gene="prpB"
                     /locus_tag="WJJ54_000745"
     CDS             8173..9048
                     /gene="prpB"
                     /locus_tag="WJJ54_000745"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HEZ7341636.1"
                     /translation="MSQHSAGARFRQAVKESNPLAVVGCVNAYFARLATQSGFKAIYL
                     SGGGVAACSCGIPDLGITTMEDVLIDARRITDNVDTPLLVDIDVGWGGAFNIARTIRN
                     FERAGVAAVHIEDQVAQKRCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDA
                     LAVEGLDAAIERAQACVEAGADMIFPEAMTDLNMYRQFADAVKVPVLANITEFGSTPL
                     YTQSELAENGVSLVLYPLSSFRAASKAALNVYEAIMRDGTQAAVVDSMQTRAELYEHL
                     NYHAFEQKLDKLFQK"
     gene            9134..10288
                     /gene="prpC"
                     /locus_tag="WJJ54_000746"
     CDS             9134..10288
                     /gene="prpC"
                     /locus_tag="WJJ54_000746"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HEZ7341637.1"
                     /translation="MTETTQTPTLKPKKSVALSGVAAGNTALCTVGRTGNDLSYRGYD
                     ILDLAQKCEFEEVAHLLIHGHLPNKFELAAYKAKLKSMRGLPIRVIKVLESLPAHTHP
                     MDVMRTGVSMLGCVHPEREGHPESEARDIADKLIASLGSILLYWYQYSHNGKRIEVES
                     EEETIGGHFLHLLHGKRPSESHIKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSS
                     ITGAIGALKGPKHGGANEVAYDIQKRYRNADEAEADIRERIGRKEIVIGFGHPVYTIS
                     DPRNVVIKEVARGLSKETGDMRLFDIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVP
                     TAMFTPLFVISRTTGWSAHVLEQRKDGKIIRPSANYTGPEDLAFVEIEER"
     gene            10421..10603
                     /locus_tag="WJJ54_000747"
     CDS             10421..10603
                     /locus_tag="WJJ54_000747"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341638.1"
                     /translation="MDKFQSIINLTADAALFVQNKATEIATIGGCQAKGVREIASNAG
                     KTLLEKYLNSEQKDEI"
     gene            10820..11473
                     /locus_tag="WJJ54_000748"
     CDS             10820..11473
                     /locus_tag="WJJ54_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEZ7341639.1"
                     /translation="MRLVGNFKGGGATKLENEDVSKVDKSSHSGIALGAHTEAPYHAA
                     TKIFNNHSPAPSSLVLTARYNPLSEPTTVIPLQPILEKLHYLDLLALTTENFDFTRSE
                     TFTSGKGTGGSKVSILEFNNDGTIGVKYNSYRFTTNVHAPQSVKDALNRFNELINNSE
                     QYKINLQPNTCMIINNTLALHCRDVIQDNRRLLIRIFGYKNNIEYISLEDDPVLAQG"
     gene            11479..12267
                     /locus_tag="WJJ54_000749"
     CDS             11479..12267
                     /locus_tag="WJJ54_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HEZ7341640.1"
                     /translation="MEDLYIILALGLVAMIAGFIDAIAGGGGLITLPALLLAGIPPVS
                     AIATNKLQAAAATFSATVSFARKGLIDWKKGLPIAAASFAGGVVGALSVSLVSKDILL
                     AVVPILLIFVALYFVFSPKLDGSKEGKARISFFLFGLTVAPLLGFYDGVFGPGVGSFF
                     LIAFIVLLGCKLLNAMSYTKLANVACNLGSLSVFLLHGSIIFPIAATMAVGAFVGANL
                     GARFAVRFGSKLIKPLLIVISISMAVKLLIDERNPLYQMIISMF"
     gene            12345..14951
                     /gene="acnD"
                     /locus_tag="WJJ54_000750"
     CDS             12345..14951
                     /gene="acnD"
                     /locus_tag="WJJ54_000750"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
                     /protein_id="HEZ7341641.1"
                     /translation="MAANQRYRKPLPGTDLEYYDARAACEDIKPGSYDKLPYTSRILA
                     ENLVNRADKVDLPTLQSWLGQLIEGKQEIDFPWYPARVVCHDILGQTALVDLAGLRDA
                     IAEKGGDPAKVNPVVQTQLIVDHSLAVECGGYDPDAFRKNRQIEDRRNEDRFHFINWT
                     KTAFENVDVIPAGNGIMHQINLEKMSPVVQVKNGVAFPDTCVGTDSHTPHVDSLGVIS
                     VGVGGLEAETVMLGRASMMRLPDIVGVELTGKRRPGITATDIVLALTEFLRKERVVGA
                     FVEFFGEGARSLSIGDRATISNMTPEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVE
                     TYAKTAGLWADALKTAVYPRVLKFDLSSVTRNMAGPSNPHARFATADLAAKGLAKPYE
                     EPSDGQMPDGAVIIAAITSCTNTSNPRNVVAAALLARNANRLGLQRKPWVKSSFAPGS
                     KVAEIYLKEAGLLPEMEKLGFGIVAFACTTCNGMSGALDPKIQKEIIDRDLYATAVLS
                     GNRNFDGRIHPYAKQAFLASPPLVVAYALAGSIRFDIENDVLGVADGREIRLKDIWPT
                     DEEIDAVVAEYVKPQQFRDVYVPMFDTGKAQKAPSPLYDWRPMSTYIRRPPYWEGALA
                     GERTLRGMRPLAILPDNITTDHLSPSNAILAVSAAGEYLAKMGLPEEDFNSYATHRGD
                     HLTAQRATFANPKLFNEMVKNEDGSVRQGSLARVEPEGETMRMWEAIETYMNRKQPLI
                     IIAGADYGQGSSRDWAAKGVRLAGVEAIAAEGFERIHRTNLIGMGVLPLQFKPGTNRH
                     TLQLDGTETYDVIGERTPRCDLTLVIHRKNGETVEVPVTCRLDTAEEVLVYEAGGVLQ
                     RFAQDFLEGNAA"
BASE COUNT         3764 a         3675 c         3968 g         3685 t
ORIGIN      
        1 tctctaaggt aacgggttct ttgacggttc aggtattgtt cgatcggctg ccaatcaatc
       61 acttggtcca acttcaatag cgggaaacgg ttgatgtgtt tggcaatcat ggcttgcgcg
      121 gtttgccgga agaaggtgct catggaaaat cccctaaatg tcttggtggg aatttagggg
      181 attttggggg attttgcaaa ggtctcatcc tgtatgccga aacatctgta atttacaaga
      241 aaactatggc gtagaagcgg atagcccttt aaaataacgc ctttacgcat cgaaaatcca
      301 ccggaacgca acattatgat gaaaaatcga gttaccaaca tccattttgt cggtatcggc
      361 ggcgtcggca tgagcggtat cgccgaagtc ttgcacaatt tgggttttaa agtttccggt
      421 tcggatcagg cgcgaaatgc cgctaccgag catttgggca gcctgggcat tcaagtttat
      481 cccggccata ccgcagaaca cgttaacggc gcggatgtcg tcgttacctc taccgccgtc
      541 aaaaaagaaa atcccgaagt tgtcgctgcg ttggagcagc aaattcccgt tattccgcgc
      601 gccctgatgt tggcggagtt gatgcgcttc cgtgacggca tcgccattgc cggcacgcac
      661 ggcaaaacca cgaccaccag cctgaccgcc tccatcctcg gcgcggcagg acttgacccg
      721 actttcgtta tcggcggcaa actcaacgcc gcaggcacca acgcccgctt gggcaaaggc
      781 gaatacatcg ttgccgaagc cgacgagtcg gatgcatcct ttctgcacct gacaccgatt
      841 atgtccgtcg ttaccaatat cgacgaagac catatggata cctacgggca cagcgtcgaa
      901 aaactgcatc aggcgtttat cgatttcatc caccgtatgc ccttctacgg caaagccttt
      961 ttgtgtattg acagcgaaca cgtccgcgcg attttgccca aagtgagcaa accttatgct
     1021 acttacggtt tggacgatac cgccgacatc tacgccaccg acatcgaaaa cgtcggcgcg
     1081 caaatgaaat tcaccgtcca tgttcaaatg aaaggacatg agcaggggtc gtttgaagtc
     1141 gtgctgaata tgcccggcag acacaacgtg ctgaacgcat tggcagccat cggcgtggcg
     1201 ctggaagtcg gcgcatcggt tgaagcgatc caaaaaggct tgctcggctt tgaaggcgtc
     1261 ggccgccgct tccaaaaata cggcgacatc aagttgccaa acggcgggac cgcgctcttg
     1321 gtggacgact acggacacca ccccgtcgaa atggcggcga cccttgccgc cgcacgcggc
     1381 gcgtatccgg aaaaacgttt ggtactcgcc ttccagccgc accgctatac ccgcacgcgc
     1441 gatttgtttg aagactttac caaagtcctc aataccgttg acgcgctggt gctgaccgaa
     1501 gtttatgccg ccggtgaaga gccgattgcc gccgccgatt cccgcgctct tgcccgcgcc
     1561 atccgcgtgt tgggcaaact cgagccgatt tactgcgaaa acgttgccga tctgcccgaa
     1621 atgctgttga acgttttgca ggacggcgac atcgtgttga atatgggcgc gggaagcatc
     1681 aaccgcgttc ccgccgcgct actggaattg tcgaaacaga tttgaggcac accctcctga
     1741 cagacggaac atcatataaa ggtcgtctga aaccgcaaat caggtttcag acgacctctg
     1801 gcaacaagca taaagcaatc aggaaagaac aaaaaacaat gcagaatttt ggcaaagtgg
     1861 ccgtattgat gggcggtttt tccagcgaac gagaaatctc gctggacagc ggcaccgcca
     1921 ttttgaacgc tttaaaaagc aaaggcatag acgcatacgc cttcgatccc aaggaaaccc
     1981 cattgtctga attgaaggca caaggttttc agacggcatt caacatcctt cacggtactt
     2041 acggcgaaga cggggcggtt caaggcgcgt tggaactgtt gggcattccc tataccggca
     2101 gcggtgtcgc cgcctccgcc atcggcatgg acaaataccg ctgcaaactg atttggcagg
     2161 cattggggct gcccgttccc gagttcgccg tcctgcacga cgacactgat ttcgatgccg
     2221 tcgaagaaaa attgggcctg ccgatgtttg tgaaaccggc ggccgaaggc agcagcgtcg
     2281 gtgtggtaaa agtcaaagaa aaaggccgtc tgaaaagcgt ttacgaagaa ttgaaacacc
     2341 ttcagggcga aatcattgcc gaacgtttta tcggcggcgg cgaatattcc tgccccgtcc
     2401 tgaacggcaa agggctgccc ggcatacaca tcattcccgc aaccgagttt tacgactacg
     2461 aagccaagta caaccgagac gacaccattt atcaatgtcc ttcggaagat ttgaccgaag
     2521 ccgaagaaag cctgatgcgc gaactggcgg ttcgcggcgc gcaggcaatc ggtgcggaaa
     2581 gctgcgtgcg cgtcgatttc ctcaaagata ccgacggcaa actctatctg ttggaaatca
     2641 acaccctgcc cggtatgacg agccatagtt tagtaccgaa atccgctgcc gttacgggcg
     2701 tgggttttgc cgatttatgt attgaaattt tgaagaccgc acatgtggga taatgccgaa
     2761 gcgatggaac ggctgacgcg ctggctgctt gtcatgatgg cgatgctgct tgctgcgtcc
     2821 gggctggttt ggttttacaa ttcgaatcat ctgcccgtca agcaggtgtc gctgaagggc
     2881 aacctggttt attccgataa gaagacattg ggcagtttgg cgaaagaata catccatggg
     2941 aatattttga ggacggacat caatggcgca caggaggcct accgccggta tccgtggatt
     3001 gcgtcggtca tggtgcgccg ccgttttccc gacacggttg aggtcgtcct gaccgagcgc
     3061 aagccggtcg cgcgttgggg cgaccatgcc ttggtggacg gcgaaggcaa tgtttttgaa
     3121 gcccgcttgg acagacccgg aatgccggta ttcagaggcg cggaaggaac gtctgccgaa
     3181 atgctccgcc gttatgacga attttcgact gttttggcaa aacagggttt gggcatcaaa
     3241 gagatgacct atacggcacg ttcggcgtgg attgtcgttt tggacaacgg catcaccgtc
     3301 aggctcggac gggaaaacga gatgaaacgc ctccggcttt ttaccgaagc gtggcagcat
     3361 ctgttgcgta aaaataaaaa tcggttatcc tatgtggata tgaggtataa ggacggattt
     3421 tcagtccgct atgcttccga cggtttaccc gaaaaagaat ccgaagaata gtgggaacag
     3481 gtatcggaca gattacggcc gtgccgtctg aaacggtgcg acgcaaattt caatcagttt
     3541 taagagcaga cgaacaatgg aacagcagca aagatacatc agcgtactgg atatcggtac
     3601 gtctaaagtc ctcgcactga tcggggaagt tcaagatgac gacaaaatca acatcgtcgg
     3661 tttggggcag gctccttcac ggggcttgcg cgcgggcatg gtaaccaata tcgatgccac
     3721 cgtccaagcc atcaggcagg cggtcaatga tgccgagctg atggcggata ccaaaattac
     3781 tcacgttacc acaggtatcg caggcaacca catccgcagt ctcaattcgc aaggtgtggt
     3841 taaaattaaa gatggggaag tcacgcaggc agacatcgat cgcgccattg aaacggcaaa
     3901 ggcaatcaat atcccgcccg atcaaaaaat tctcgatgcc gtggttcaag actacattat
     3961 tgacacccaa cttggcgtga gggagcccat cggtatgagc ggtgtgcgtc tggatacgcg
     4021 ggtgcacatc attaccggtg caagtacggc agtgcagaat gtccaaaaat gtatcgagcg
     4081 gtgcggtttg aaaagcgatc agatcatgct tcagccgttg gcaagcgggc aggcggtgct
     4141 gactgaagat gaaaaagacc tcggcgtatg cgtcatcgac attggtggcg gaacgaccga
     4201 tattgccgtt tatatgaacg gtgccatccg ccatacgtcc gtcattccgg ccggtggtaa
     4261 tctgattacc aaagatttgt ccaaatcgtt gagaacacct ctcgatgccg ccgagtacat
     4321 taaaatccat tatggcgtgg catcatgcga tacggaaggc ttgggtgaga tgattgaagt
     4381 tccgggcgtg ggtgaccgga catcgcgtca ggtttccagt aaggttttgg cagcaatcat
     4441 cagcgcacgt attcaggaga tttttggcgt agtgctgggc gagctgcaaa aatcgggttt
     4501 ccccaaagaa gtgctgaatg cgggtatcgt tctgaccggc ggtgtgtcca tgatgaccgg
     4561 gattgtggaa tttgccgaaa aaatcttcga tttgcctgta cgcaccggtg cgccccaaga
     4621 aatgggcggt ttgtccgacc gcgtccgcac accgcgcttt tctaccgcca tcgggctgct
     4681 tcatgcagca tgcaagctgg aaggaaactt gccgcagccg gaaaacggtg cagtgcaaga
     4741 gagggaagtg ggcggcggtt tgttggcaag attgaaacgg tggattgaaa acagcttctg
     4801 aacaggtgga ttgccgtttg acaggtgaga agtattttgc cagcagcaag atacttctta
     4861 tataatgaat aataatttat ttaaaccgtc ctctgaatgg ggcgagcagg agtttttgaa
     4921 tggaatttgt ttacgacgtg gcagaatcgg cagtcagccc tgcggtgatt aaagtaatcg
     4981 gcttgggcgg cggcggttgc aatgcaatca ataacatggt tgccaacaat gtgcgcggtg
     5041 tggagtttat cagtgccaat acggatgcgc agtctctggc aaaaaaccat gcggcgaaga
     5101 gaatccagtt gggtacgaat ctgacacgcg gtttgggcgc gggcgcgaat cccgatatcg
     5161 gccgtgcggc agcccaggaa gaccgggaag ccattgaaga agccattcgc ggtgcgaata
     5221 tgctgtttat cacgaccggt atgggcggcg gtaccggtac cggttccgcg ccggttgttg
     5281 ctgagattgc caagtctttg ggcattctga ccgttgccgt ggttacccga ccgttcgcat
     5341 atgaaggtaa gcgcgtccat gtcgcacagg cagggttgga acagttgaaa gaacacgtcg
     5401 attcgctgat catcatcccg aacgacaaac tgatgactgc attgggtgaa gacgtaacga
     5461 tgcgcgaagc cttccgtgcc gccgacaatg tattgcgcga tgcggtcgca ggcatttccg
     5521 aagtggtaac ttgcccgagc gaaatcatca acctcgactt tgccgacgtg aaaaccgtga
     5581 tgagcaaccg cggtatcgct atgatgggtt cgggttatgc ccaaggtatc gaccgtgcgc
     5641 gtatggcgac cgaccaggcc atttccagtc cgctgctgga cgatgtaacc ttggacggag
     5701 cgcgcggtgt gctggtcaat attacgactg ctccgggttg cttgaaaatg tccgagttgt
     5761 ccgaagtcat gaaaatcgtc aaccaaagcg cgcatcccga tttggaatgc aaattcggtg
     5821 cggctgaaga cgagaccatg agcgaagatg ccatccggat taccattatc gctaccggtc
     5881 tgaaagaaaa aggcgcggtc gattttgttc cggcaaggga ggtagaagcg gttgccccgt
     5941 ccaaacagga gcaaagccat aatgtcgaag gtatgatccg caccaatcgc ggtatccgca
     6001 cgatgaacct taccgctgcg gatttcgaca atcagtccgt acttgacgac tttgaaatcc
     6061 ctgcgatttt gcgtcgtcaa cacaattcag acaaataatg tgctgtttgc ccgtaaacct
     6121 gctgcctccc gaatcggttt gtccggtttg ggaggtatgt ttttcaagat gttgcaattt
     6181 cgtacggttt gcggtcggcg gattcagatt tttccacttg atacagactt tcagatatgg
     6241 acacttcaaa acaaacactg ttggacggga tttttaagct gaaggcaaac ggtacgacgg
     6301 tgcgtaccga gttgatggcg ggtttgacaa cttttttgac gatgtgctac atcgttatcg
     6361 tcaaccccct gattttgggc gagaccggca tggatatggg ggcggtattc gtcgctacct
     6421 gtatcgcgtc tgccatcggc tgttttgtta tgggttttgt cggcaactat ccgattgcac
     6481 tcgcaccggg gatggggctg aatgcctatt tcacctttgc cgtcgttaag ggtatgggcg
     6541 tgccttggca ggttgcgttg ggtgcggtgt tcatctccgg tctgattttc atcctgttca
     6601 gcttttttaa agtcagggaa atgttggtca acgcactgcc tatgggtttg aaaatgtcga
     6661 ttgctgccgg tatcggtttg tttttggcac tgatttccct gaaaggcgca ggcattatcg
     6721 ttgccaatcc ggcaaccttg gtcggcttgg gcgatattca tcagccgtcc gcgttgttgg
     6781 cactgttcgg ttttgctatg gtggtcgtat tgggacattt ccgcgttcaa ggcgcaatca
     6841 tcatcaccat tttgacgatt accgtcattg ccagcctgat gggtttgaat gaattccacg
     6901 gggtaatagg cgaagtgccg agcattgcgc cgacttttat gcagatggat tttgaaggcc
     6961 tgtttaccgt cagcatggtc agtgtgattt tcgtcttctt cttggtcgat ctatttgaca
     7021 gtaccggaac gctggtcggc atatcccacc gtgccgggct gctggtggac ggtaagctgc
     7081 cccgcctgaa acgcgcactg cttgcagact ctaccgccat tgtggcaggt gcggctttgg
     7141 gtacttcttc caccacgcct tatgtggaaa gcgcggcggg cgtatcggca ggcggacgga
     7201 ccggcctgac ggcggttacc gtcggcgtat tgatgctcgc ctgcctgatg ttttcacctt
     7261 tggcgaaaag tgttccggca tttgccaccg cgcccgccct gctttatgtc ggcacgcaga
     7321 tgctccgcag tgcgagggat attgattggg acgatatgac ggaagccgca cccgcattcc
     7381 tgaccattgt cttcatgccg tttacctatt cgattgcaga cggcatcgcc ttcggcttca
     7441 tcagctatgc cgtggttaaa cttttatgcc gccgcaccaa agacgttccg cctatggtat
     7501 ggattgttgc cgtattgtgg gcactgaaat tctggtattt gggctgattg attcgatatt
     7561 aaaaatgccg tctgaaaggt tttcagacgg cattttgttt gccgatatat ttaattttta
     7621 ttaaattata taaaaatcaa atacataata aaatacatcg gattgcttaa aaataataca
     7681 ttgtttttat gtataaaata ttttataagt tttcaggatt ttgattatcg aaaatttttc
     7741 ttgatttcct gacaatttta ttgaaacaaa taattcaaaa ttaatctagt ttaatcatgg
     7801 aattaaaata aaatattaaa attatgtaat gagtctcctt aaaaatgttt gacattttca
     7861 gtcttgtgtt ttagattagc gaaaaataaa accacacaat actacaaagg aacattacta
     7921 tgaaaccaat tcagatgttt tccccttttc tgaataatcc ccttgttttc ttcttgtctg
     7981 cggttttgcc gcataattcc gaacggtctg ctgtttttct ttgattcgtt ttaaatatca
     8041 ataagataat ttttcccata tatttttaat gattggattg ggatgcccga cgcgtcggat
     8101 ggctgtgttt tgccgtccga atgtgatgga agcctgtcca tactgaaaaa aagtctataa
     8161 aggagaaata tgatgagtca acactctgcc ggagcacgtt tccgccaagc cgtgaaagaa
     8221 tcgaatccgc ttgccgtcgt cggttgcgtc aatgcttact ttgcacgatt ggccacccaa
     8281 agcggtttca aagccatcta tctgtccggc ggcggcgtgg cagcctgttc ttgcggtatc
     8341 cctgatttgg gcattaccac aatggaagat gtgctgatcg acgcacgacg cattacggac
     8401 aacgtggata cgcctttgct ggtggacatc gatgtgggtt ggggcggtgc attcaatatt
     8461 gcccgtacca ttcgcaactt tgaacgcgcc ggtgttgcag cggttcacat cgaagatcag
     8521 gtagcgcaaa aacgctgcgg ccaccgtccg aacaaagcca ttgtatctaa agatgaaatg
     8581 gtcgaccgta tcaaagctgc cgtagatgcg cgcgttgatg agaacttcgt gattatggcg
     8641 cgtaccgatg cgctggcggt agaaggtttg gatgccgcta tcgaacgcgc ccaagcttgt
     8701 gtcgaagccg gtgcggacat gattttccct gaagccatga ccgatttgaa catgtaccgc
     8761 caatttgcag atgcggtgaa agtgcccgtg ttggcgaaca ttaccgagtt tggttccact
     8821 ccgctttata cccaaagcga gctggctgaa aacggcgtgt cgctggtgct gtatccgctg
     8881 tcatcgttcc gtgcagcaag caaagccgct ctgaatgttt acgaagcgat tatgcgcgat
     8941 ggcactcagg cggcggtggt ggacagtatg caaacccgtg ccgagctgta cgagcatctg
     9001 aactatcatg ccttcgagca aaaactggat aaattgtttc aaaaatgatt taccgctttc
     9061 agactgcctt tcaacaaatc cgcatcggtc gtctgaaaac ccgaaaccca taaaaacaca
     9121 aaggagaaat accatgactg aaactactca aaccccgacc ctcaaaccta aaaaatccgt
     9181 tgcgctttct ggcgttgcgg ccggtaatac cgctttgtgt accgttggcc gtaccggcaa
     9241 cgatttgagc tatcgcggtt acgacattct ggatttggca caaaaatgtg agtttgaaga
     9301 agttgcccac ctgctgattc acggccattt acccaacaaa ttcgagctgg ccgcttataa
     9361 agccaagctc aaatccatgc gcggcctgcc tatccgtgtg attaaagttt tggaaagcct
     9421 gcctgcacat acccatccga tggacgtgat gcgtaccggc gtatccatgc tgggctgtgt
     9481 tcatcctgaa cgtgaaggcc atccggaaag cgaagcgcgc gacattgccg acaaactgat
     9541 cgccagcctc ggcagtatcc tcttgtactg gtatcaatat tcgcacaacg gcaaacgcat
     9601 tgaagttgaa agcgaagaag agaccatcgg cggtcatttc ctgcacctgt tgcacggcaa
     9661 acgcccaagc gaatcacaca tcaaagccat gcacgtttca ctgattctgt atgccgaaca
     9721 cgagttcaac gcttctacct ttaccgcccg cgtgatcgcc ggtacaggct ctgatatgta
     9781 ctccagcatt accggagcaa tcggcgcgtt gaaaggtccg aaacacggcg gcgcgaacga
     9841 agtggcttac gatattcaaa aacgctaccg caatgccgac gaagccgaag ccgacatccg
     9901 cgaacgcatc ggccgcaaag aaatcgtgat cggtttcggt catccggtgt acaccatttc
     9961 cgaccctcgc aacgttgtca ttaaagaagt ggcacgcggt ttgagcaaag aaaccggcga
    10021 tatgcgcctc tttgacattg ccgaacgttt ggaaagcgtg atgtgggaag agaaaaaaat
    10081 gttcccgaat ctggactggt tctctgccgt ttcctaccaa aaattgggcg taccgaccgc
    10141 tatgttcaca ccgctgttcg taatttcccg tacaaccggt tggagcgcac acgttctcga
    10201 gcaacgcaaa gacggcaaaa tcatccgtcc gagcgcaaac tacacaggtc cagaagattt
    10261 ggcgtttgtg gagattgaag aacgataatt gaagaatgca atagcagttt gttctttatt
    10321 tcggtatgca aagctgagga tttcagacga ccttgcctta ttggaaaggt tgtctgaaat
    10381 aagtttaaaa atttaaccta ataaaaaggg tatgtattaa atggataagt ttcaatcaat
    10441 tattaattta actgctgatg ctgctttgtt tgttcaaaat aaagcaacgg aaatcgcaac
    10501 aataggtggc tgtcaagcaa agggagtaag agaaattgca agtaatgcag ggaaaacctt
    10561 attggaaaaa tatttaaact cagaacaaaa ggatgaaatc tagaaattca ttcatcaaaa
    10621 aacttgtgta gttattttta ataatcttta tgataaaaac attgataatt caataattag
    10681 cattccaagt tctttaccaa aaatggaaga gcttgaagaa aacttagaat gtttgaaatt
    10741 ggctgcatct aatcagattt tattggcaac agtagagcaa tttgcatttg cttataatat
    10801 tgataatcat gggaaaataa tgagacttgt tggtaatttc aagggaggtg gagcaacaaa
    10861 acttgaaaat gaagatgtta gcaaagtaga taaaagttca cattcaggaa ttgcattagg
    10921 ggcgcatact gaagctcctt accatgcggc aacaaagatt tttaataatc actcccccgc
    10981 accatcatct cttgttttaa ctgcaagata caatccgcta tcagaaccga caacagtaat
    11041 tccattacaa cctattttgg aaaagttgca ttatttggat ttattggcat taacgacaga
    11101 aaattttgac tttactcgta gtgagacgtt tacgtcagga aaaggaacag ggggaagtaa
    11161 agtatctata cttgaattta ataacgatgg aactattggt gttaaatata actcttatag
    11221 atttactact aatgtgcatg caccccaatc ggttaaagat gctttgaata gatttaatga
    11281 attaatcaac aactctgaac aatataaaat caacttacaa ccaaacactt gtatgatcat
    11341 taacaacacg ttggctttgc attgccgtga tgttattcaa gataacagaa gattgttaat
    11401 tcgtattttt ggatataaaa ataatattga gtatatttct ttagaagatg atcctgtatt
    11461 ggctcaagga taagaaacat ggaagattta tatataatac tcgctttggg tttggttgcg
    11521 atgattgccg gatttatcga tgcgattgcg ggtgggggtg gtttgattac gctgcctgca
    11581 ctcttgttgg caggtattcc tcccgtgtcg gcaattgcca ccaacaagct gcaagcagcc
    11641 gctgctacgt tttcggctac ggtttctttt gcacgcaaag gtttgattga ttggaagaaa
    11701 ggtctcccga ttgcggcagc atcgtttgca ggcggcgtgg tcggtgcatt atcggtcagc
    11761 ttggtttcca aagatattct gctggcggtc gtgccgattt tgttgatatt tgtcgcgctg
    11821 tattttgtgt tttcgcccaa gctcgacggc agtaaggaag gcaaagccag aatatctttt
    11881 tttctattcg ggctgacggt tgcaccgctt ttgggttttt acgacggtgt gttcggaccg
    11941 ggtgtcggct cgttttttct gattgccttt attgttttgc tcggctgcaa gctgttgaac
    12001 gcgatgtctt acaccaaatt ggcgaacgtt gcctgcaatc ttggttcgct atcggtattc
    12061 ctgctgcacg gttcgattat tttcccgatt gcggcaacga tggcggtcgg tgcgtttgtc
    12121 ggtgcgaatt taggtgcgag atttgccgtc cgcttcggtt cgaagctgat taagccgctg
    12181 ctgattgtca tcagcatttc gatggctgtg aaattgttga tagacgagag aaatccgctg
    12241 tatcagatga ttatttcgat gttttaaacc ctttcagacg accccttcaa aacgtcggct
    12301 gaaacctcaa accacaagaa aaacagatcc ccaggagaac cgacatggct gccaaccaac
    12361 gttaccgcaa accgctgccc ggtacggatt tggaatacta cgacgcgcgt gcggcgtgtg
    12421 aggacatcaa gcccggctct tacgacaagc tgccttacac gagccgcatt ttggcggaga
    12481 atttggtcaa ccgcgcggac aaagtcgatt tgccgacgct gcaaagctgg ctgggtcagc
    12541 tgattgaggg aaaacaggaa atcgactttc cttggtatcc ggcgcgggtg gtgtgccacg
    12601 atattctggg gcagaccgcg ttggtggatt tggcaggtct gcgcgatgcg attgccgaaa
    12661 aaggcggcga tcctgccaaa gtgaatccgg tggtgcaaac ccagctcatc gtcgaccact
    12721 ctctggccgt tgaatgcggc ggctacgacc ccgatgcctt ccgcaaaaac cgccaaatcg
    12781 aagacagacg taacgaagac cgtttccact tcatcaactg gacaaaaacc gcatttgaaa
    12841 atgtggacgt gattccggcg ggcaacggca tcatgcacca aatcaatcta gaaaaaatgt
    12901 cgcccgtcgt ccaagtcaaa aacggcgtgg cgttccccga tacctgcgtc ggtactgact
    12961 cacatacgcc gcacgtcgat tcattgggcg tgatttccgt gggcgtgggc ggattggaag
    13021 cggaaaccgt aatgctggga cgcgcgtcca tgatgcgcct gcccgatatt gtcggcgttg
    13081 agctgaccgg caaacgccgg ccgggcatta ctgccaccga catcgtgttg gcactgactg
    13141 agttcttgcg caaagaacgc gtggtcgggg catttgtcga attcttcggc gaaggtgcga
    13201 gaagcctgtc catcggcgac cgcgcaacta tttccaatat gacccctgaa ttcggcgcga
    13261 ctgccgcgat gttcgctatt gatgagcaaa ccattgatta tttgaaactg accggacgcg
    13321 acgacgcgca ggtgaaattg gtggaaacct acgccaaaac cgcaggctta tgggcagatg
    13381 ccttgaaaac cgccgtttat ccgcgcgttt tgaaatttga tttgagcagc gtaacgcgca
    13441 atatggcagg cccaagtaac ccgcatgccc gttttgcgac cgccgatttg gcggcgaaag
    13501 ggctggcgaa gccttacgaa gagccttcag acggccaaat gcctgacggt gcagtgatta
    13561 ttgccgcgat tacttcgtgt accaatactt ccaatccgcg caacgttgtc gccgctgcgc
    13621 tgttggcacg caatgccaac cgcctcggct tgcaacgcaa accttgggtg aaatcttcgt
    13681 ttgccccggg ttcaaaagta gccgaaatct atttgaaaga agcaggcctg ctgcctgaaa
    13741 tggaaaaact cggcttcggt atcgttgcct tcgcatgtac cacctgtaac ggcatgagcg
    13801 gcgcgctcga cccgaaaatc cagaaagaaa tcatcgaccg cgatttgtac gccaccgccg
    13861 tactgtcagg caaccgcaac ttcgacggcc gtattcatcc gtatgcgaaa caggctttcc
    13921 tcgcttcgcc cccgttggtc gttgcttacg cgctggcagg cagcatccgt ttcgatattg
    13981 aaaacgatgt actcggcgtt gcagacggcc gcgaaatccg cctgaaagac atctggccga
    14041 ccgacgaaga aatcgatgcc gtcgttgctg aatatgtgaa accgcagcag ttccgcgatg
    14101 tgtatgtacc gatgttcgac accggcaaag cgcaaaaagc acccagtccg ctgtacgatt
    14161 ggcgtccgat gtccacctac atccgccgtc cgccttactg ggaaggcgcg ctggcagggg
    14221 aacgcacatt aagaggtatg cgtccgctgg cgattttgcc cgacaacatc accaccgacc
    14281 acctctcgcc gtccaatgcg attttggccg tcagtgccgc aggcgagtat ttggcgaaaa
    14341 tgggtttgcc tgaagaagac ttcaactctt acgcaaccca ccgcggcgac cacttgaccg
    14401 cccaacgcgc taccttcgcc aatccgaaac tgtttaacga aatggtgaaa aacgaagacg
    14461 gcagcgtgcg ccaaggctcg ctcgcccgcg tcgaacccga aggcgaaacc atgcgcatgt
    14521 gggaagccat cgaaacctat atgaaccgca aacagccgct catcatcatt gccggtgcgg
    14581 actatggtca aggctcaagc cgcgactggg cggcgaaggg cgtgcggctc gcgggagtgg
    14641 aagccatcgc cgccgaaggt ttcgagcgca tccaccgcac caatctcatc ggcatgggcg
    14701 tcttgccgct gcaattcaaa cccggcacca accgccacac cctgcaactg gacggcacgg
    14761 aaacctacga cgttatcggc gaacgtacac cgcgctgcga cctgaccctc gtgattcacc
    14821 gtaaaaacgg agaaaccgtc gaagttcccg ttacctgccg cctcgatact gcagaagaag
    14881 tattggtata tgaagccggc ggcgtgttgc aacggtttgc acaggatttt ttggaaggga
    14941 acgcggctta gaggtcgtct gaaaagcaag acgtagcgtg ggtcgggttc aacattttgc
    15001 tcattcacgt aattctcgat atggcaggca tctactgtaa atcgtcattc ccgcgcaggc
    15061 gggaatccag aaagtggaat tgaggaaacc tt
//
LOCUS       DAWKJW010000033        14920 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.033, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000033 DAWKJW010000000
VERSION     DAWKJW010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14920
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.033"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(104..1888)
                     /gene="lpdA"
                     /locus_tag="WJJ54_000751"
     CDS             complement(104..1888)
                     /gene="lpdA"
                     /locus_tag="WJJ54_000751"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ7341642.1"
                     /translation="MSLVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKA
                     TMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAEGTAAAPKAEAAAAPAQEAPKAAA
                     PAPQAAQFGGSADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVG
                     CIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKS
                     RKVDVIQGDGQFLDPHHLEVSLTAGDVYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPF
                     IPEDPRIFDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG
                     ADRDLVKVWQKQNEYRFDNIMINTKTVAVEPKEDGVYVTFEGTNAPKEPQRYDAVLVA
                     AGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEG
                     HVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASGRKITKANFPWAASGR
                     AIANGCDNGFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHP
                     HPTLGESIGMAAEVALGTCTDLPPQKKK"
     gene            complement(1965..3572)
                     /gene="aceF"
                     /locus_tag="WJJ54_000752"
     CDS             complement(1965..3572)
                     /gene="aceF"
                     /locus_tag="WJJ54_000752"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HEZ7341643.1"
                     /translation="MSIVEIKVPDIGGHENVDIIAVEVKAGDTIAVDDTLITLETDKA
                     TMDVPADAAGVVKEVKVKVGDKISEGGVILTVETGAAAAEAAPAAAEAQPAPAAAPVA
                     AGGATVQVAVPDIGGHTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGVV
                     KAVFLKVGDKVSEGTAIIEVETAGSAAAAPAQAAQAAAPAAAPPPTAAAAPAAAPAPS
                     APAAAKIDEAAFAKAHAGPSARKLARELGVDLGQVKGTGLKGRIVGDDIKAFVKSVMQ
                     GGAAKPAAAGASLGSSLDLLPWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPH
                     VTVHEEADMTELEEFRKQLNKEWEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDN
                     LVLKNYFNIGFAADTPNGLVVPVIKDVDQKGLKQISQELTELSKKAREGKLKPQEMQG
                     ACFTISSLGGIGGTGFTPIVNAPEVAILGVCKSQIKPVWNGKEFAPRLMCPLSLSFDH
                     RVIDGAAGMRFTVFLAKLLKDFRRITL"
     gene            complement(3722..6385)
                     /gene="aceE"
                     /locus_tag="WJJ54_000753"
     CDS             complement(3722..6385)
                     /gene="aceE"
                     /locus_tag="WJJ54_000753"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HEZ7341644.1"
                     /translation="MSTQLHDVDPIETQEWLDALSSVLEYEGGERAQYLLENLVKYCR
                     DKGVRMPHGTTTPYLNTVSVENEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLEL
                     GGHIASFQSAATMYEVGFNHFWKAKGEGEEGDLVFFQGHVAPGIYARAFVEGRLTEDQ
                     LNNFRQEVDGHGLPSYPHPHLLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLAKT
                     KGRKVWCFCGDGEMDEPESQGAIALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQE
                     LEGNFAGAGWNVVKVIWGRRWDRLLAKDKDGILRQRMEECLDGDYQTYKSKDGAYVRE
                     HFFNTPELKALVADMTDEQLWALNRGGHDPQKVYNAYDRAANHADGKPTVILAKTIKG
                     YGMGASGEGQNVAHQAKKMDKASLKQFRDRFDIPVTDEQIESGDLPYLTFAPDTEEYK
                     YLHARRDALGGYLPQRKPTQEVLEVPELSAFDAQLKSSGEREFSTTMAFVRILSTLLK
                     DKKIGKRVVPIVPDESRTFGMEGMFRQYGIWNPKGQQYTPQDKDQLMFYKESVDGQIL
                     QEGINEPGAMADWIAAATSYANSNFAMIPFYIYYSMFGFQRIGDLAWAAGDMHARGFL
                     LGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYDPTFQYEVAVIVQDGLRRMYANN
                     EDVFYYITLMNENYTHPDMPEGAEQDILKGMYLLKAGGKGDKKVQLMGSGTILQEVIA
                     GAELLKADFGLEADIWSCPSFNLLHRDAVEVERFNRLHPLEAEKVPFVTSQLQGHDGP
                     VIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRRFFEVDRYNVAVAALAA
                     LAEQGKVSKETVQQAIEKYGIKADSAPSWKR"
     gene            7080..8792
                     /locus_tag="WJJ54_000754"
     CDS             7080..8792
                     /locus_tag="WJJ54_000754"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEZ7341645.1"
                     /translation="MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMP
                     MGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDR
                     DFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDA
                     YSFHTDYASLQTTYDAMYDAYCRIFTRLGLEFRPVAADTGSIGGTGSHEFQVLAESGE
                     DVIAYSDTSDYAANIELAPTLPLKGERAAAQAELVKVHTPNVKTIESLVEFLNIPVEQ
                     TLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMASPAAIVEQFGANGG
                     SLGPVGFAGKVYADFATEKDGDWVIGANEDGYHYTGFNFGRDAAEPEFVDLRDVVEGD
                     ESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVV
                     AAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLD
                     DRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVTA
                     SLNG"
     gene            8855..9511
                     /locus_tag="WJJ54_000755"
     CDS             8855..9511
                     /locus_tag="WJJ54_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEZ7341646.1"
                     /translation="MASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKP
                     SGSILNSGGTILLPEFSRDVQFECELVLLVGKDSDGMGEGEDILGCVAGYGVGLDLTA
                     RDIQCHLKAQGLPWLKAKGFRHSACVSDFAAAGRISNPEKVLFSLKQNGVLKQRGDTG
                     LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVRASFTVGC
                     "
     gene            complement(9521..9976)
                     /gene="ruvX"
                     /locus_tag="WJJ54_000756"
     CDS             complement(9521..9976)
                     /gene="ruvX"
                     /locus_tag="WJJ54_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEZ7341647.1"
                     /translation="MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDE
                     KFAAIAKLVQEWQPHYFVVGLPVHTDGTKHEMTHLSRKFGRRLNGRFNLPVYWVDERL
                     SSVYAESLLSEAQVFGKKRKSVLDQVAAQAILHGFFEGGPAECFNGREG"
     gene            complement(9969..10517)
                     /locus_tag="WJJ54_000757"
     CDS             complement(9969..10517)
                     /locus_tag="WJJ54_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEZ7341648.1"
                     /translation="MNLSNHFLVAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSP
                     ITMDMIFSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDNIALTS
                     SRDVIENISREGAVDKALISIGYSSWGKGQLERELADNTWLTVPADEHILFDIPYEHR
                     YAAAFAKLGIDPLALFSGAGHA"
     gene            complement(10519..11079)
                     /locus_tag="WJJ54_000758"
     CDS             complement(10519..11079)
                     /locus_tag="WJJ54_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HEZ7341649.1"
                     /translation="MNRLLLLSAAVLLTACGSGETDKIGRASTVFNMLGKNDRIEVEG
                     FDDPDVQGVACYISYAKKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEV
                     FKHGASFAFKSRQIVRYYDPKRKTFAYLVYSDKIIQGSPKNSLSAVSCFGGGIPQTDG
                     VQADTSGNLLAGACMISNPIENPDKR"
     gene            11408..13213
                     /locus_tag="WJJ54_000759"
     CDS             11408..13213
                     /locus_tag="WJJ54_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEZ7341650.1"
                     /translation="MRYKPLLLALMLVFSTPAVAAHDAAHNRSAEVKKQTKNKKEQPE
                     AAEGKKEKGKNGAVKDKKTGGKEAAKEGKESKKTAKNRKEAEKEATSRQSARKGREGD
                     KKSKAEHKKAHGKPVSGSKEKNAKTQPENKQGKKEAKGQGNPRKGGKAEKDTVSANKK
                     VRSDKNGKAVKQDKKYREEKNAKTDSDELKAAVAAATNDVENKKALLKQSEGMLLHVS
                     NSLKQLQEERIRQERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKTEVAA
                     TKAQISRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEKQQ
                     KALAVQEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLE
                     QKGNEQQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRA
                     EMSNLTAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGV
                     FYSTAPATVESIASGTVSYADELDGYGKVVVVDHGENYISIYAGLSEISVGKGYMVAA
                     GSKIGSSGSLPDGEEGLYLQIRYQGQVLNPSSWIR"
     gene            13340..14824
                     /locus_tag="WJJ54_000760"
     CDS             13340..14824
                     /locus_tag="WJJ54_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEZ7341651.1"
                     /translation="MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDRRDNEVLPVQ
                     SIRTMAEVYGQIKANYYQDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSG
                     EFGGLGMEIGQEDGFVKVVSPIEDTPAERAGVKSGDFIVKIDNVSTRGMTVSEAVKKM
                     RGKPGTKITLTLSRKNADKPIVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVE
                     SVNTAAKELVKENKGKPLKGLVLDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDG
                     KDRMVLKAVPEDYVYGMGGDSLAGIPAELKTIPMTVLVNSGSASASEIVAGALQDHKR
                     AVIVGTQSFGKGSVQTLIPLSNGSAVKLTTALYYTPNDRSIQAQGIVPDVEVKDKERI
                     FESREADLVGHIGNPLGGEDVNSETLAVPLEKDADKPAVKEKGKKKKDEDLSSRRIPN
                     PAKDDQLRKALDLVKSPEQWQKSLGLAAKKPVSNKDKKDKKDKK"
BASE COUNT         3543 a         3699 c         4209 g         3469 t
ORIGIN      
        1 ccggaaaaaa tattttaatc cgctgtaaaa tagaaaatgc cgtctgaaca tttcagacgg
       61 catttgctca aataaacctt atcggctgtt tattcagtcg gatttatttt ttcttttgcg
      121 gaggcaggtc ggtacaagta cccaatgcca cttccgccgc cataccgatg gattcgccca
      181 aggtcgggtg cgggtggatg gttttgccga tgtctgccgc gtcgcagccc atttcgatgg
      241 caaggcagac ttcgccgatc atgtcgccac cgttcggacc gacaatgccg ccgccgatga
      301 tgcggccggt ttcggcatcg aaaatcagct tggtaaagcc gttgtcgcaa ccgttggcaa
      361 tcgcacgacc ggaagccgcc cacgggaagt tggctttggt gattttgcgg ccggaggctt
      421 tggcggacaa ctcggtttcg cccacccacg ccacttcggg ggaagtgtag gcaacgcccg
      481 gaatcacgcg cgcgtcgaag taggctttgt ggccggcgca gttttcggcg gcaacgtggc
      541 cttcgtgaac ggctttgtgc gccaacatcg gctgaccgac gatgtcgccg atggcgtaga
      601 tgtgcggcac attggtacgc atttgtttgt ccacttcgat gaagccgcga tcggtaacgg
      661 caacgcctgc tttttccgcg ctgatgagtt tgccgttggg cgcgcggccg gcggcaacca
      721 atacggcatc gtagcgttgc ggctctttcg gtgcgttcgt gccttcaaag gtaacgtaaa
      781 cgccgtcttc tttcggctcg actgcaacgg ttttggtgtt gatcatgatg ttgtcaaaac
      841 gatattcgtt ttgtttttgc catactttca ccaagtcgcg gtctgcgcct tgcatcaggc
      901 cgtccatcat ttcaacaaca tccaggcgag aacccagcgt gctgtaaacc gtacccattt
      961 cgagaccgat aataccgcca ccgatgatca gcagtttgcc cggcacttct ttcagcgcca
     1021 aagcgccgct ggagtcgaaa attcgaggat cttcagggat gaaaggcagt ttggttacgc
     1081 ggctgcctgc tgcaatgata cagtttttga aggcaacgat ttttttctcg ccggtagggg
     1141 ctgcctgttc gtacacatcg ccggcagtca gcgacacttc caagtggtgc ggatctaaga
     1201 attgcccgtc gccttggata acgtccactt tacggctttt cgccatacct gccaaaccgc
     1261 ccgtgaggcg ggaaactacg ccgtctttgt aggcgcgaag catatcgatg tcgagttccg
     1321 gctcggggta tttgataccg ttggcagcca agtggcgcac ttcgtcgata acggcggcat
     1381 tgtgcaacaa ggctttggaa gggatacagc cgacgttcag gcaaacgccg cccaaagttt
     1441 tgtaacgttc gacgatggcg actttcaagc cttcatcggc agcggcaaat gcagcggagt
     1501 aaccgccggg accgccaccc aatacgacca cgtcgtactc ggcatcggca gaaccgccga
     1561 attgcgcggc ttgcggagca ggagcagcag ctttaggggc ttcttgcgcc ggggcggcag
     1621 ccgcttcggc tttaggagcg gcagccgtgc cttcagcttc aacgacaaca atcaaaccgc
     1681 cttcggagat tttgtcgccg actttgactt tcacttcttt gaccacgccc gcaacttcgg
     1741 caggcacgtc catcgtcgct ttgtcggttt ccaaggtaat cagggtgtcg tcaacggcga
     1801 tggtgtcgcc cacgtttact tcaaccgcga taatatctac attttcgtgt ccgccaatgt
     1861 cgggcacttt caattcaact aagctcatgt ctcatctttc tgaatgatgt tcaaacttcc
     1921 ttttcagacg gcacagaccg ctatgccgtc tgaagccgat cgggttacag ggtaatgcgg
     1981 cggaagtctt tcaacagctt cgccaagaat acggtgaagc gcataccggc cgcaccgtcg
     2041 atgacgcggt ggtcgaagga caggctcaac gggcacatca ggcgcggggc aaactctttg
     2101 ccgttccaaa ccggtttgat ttgggatttg cacacgccca agatggcgac ttcgggagcg
     2161 ttcacaatcg gcgtgaaacc tgtgccgccg atgccgccca agctggaaat ggtaaagcac
     2221 gcgccttgca tttcttgcgg tttgagcttg ccttcgcggg cttttttaga caattcggtc
     2281 agctcttggc tgatttgttt caagcctttt tgatccacgt ctttgatgac gggaacaacc
     2341 aagccgttcg gcgtatcggc tgcgaaaccg atgttgaagt agtttttcag caccaggttg
     2401 tcgccgtcca aagaagcgtt gaattcgggg aaggctttca gcgcggaaac ggaggctttg
     2461 atgatgaacg ccagaggaga cagtttcacg ccttcgcgtt cccattcttt gttcagttgt
     2521 ttgcggaatt cttccagctc ggtcatatcc gcttcttcgt gtacggtaac gtgcggaatc
     2581 acaacccagt tgcgagacag gttttgaccg gagattttct taatgcggga caattcttta
     2641 acttcgacat tgccgaattt ggagaagtcc actttaggcc acggcagcaa gtccagactg
     2701 ctgcccaaag atgcgccggc tgcggcaggt tttgccgcgc caccctgcat tacggatttc
     2761 acaaaggctt tgatgtcgtc gcccacgata cggcctttca agccggtacc tttgacttgg
     2821 cccaaatcca cgcccaattc gcgcgccagt ttgcgtgcgg aagggccggc gtgtgctttg
     2881 gcgaaagcgg cctcgtcgat tttggcagcg gcaggtgcag aaggtgcagg cgcggcggcg
     2941 ggtgcggcgg cagcagtcgg aggcggagcg gcagccggtg cggcagcttg agcggcttga
     3001 gcaggggctg ctgcggcaga gccggcggtt tctacttcga taatggcagt accttcggac
     3061 actttgtcgc cgacttttaa gaatacggct ttaacgacac cggcagcggt acaaggtacg
     3121 tccatcgttg ctttgtcggt ttccaaagta atcagcgtgt cgtcttcggc aacggtatcg
     3181 ccgactttga tctcgacggc gattacatcc acatcggtat ggccgccgat gtcgggaacg
     3241 gctacttgaa cggttgcacc gcctgcggca acgggtgcgg cagcaggtgc aggttgtgct
     3301 tcggcagcag caggagcggc ttcggcagcg gcggcaccgg tttcaacggt caaaattacg
     3361 ccgccttcgg agattttgtc gccgactttg actttaactt ctttcacgac accggccgca
     3421 tcggcaggca catccatcgt ggctttgtcg gtttccaaag taatcagggt gtcgtcaacg
     3481 gcgatggtgt cgcccgcttt aacttctacg gcgatgatgt cgacgttttc gtgaccgccg
     3541 atatcgggga ctttgatttc tacgatactc atttgagttc ctttaatctt tttcaattgg
     3601 atgccgtctg aaagctgctt caggcggcat cggtacggtt tgtctgctca aaccattcgg
     3661 gcattcggtt ttcagacggc ctgatgtcgg aatggggcaa acaggccgtc tgaaacatca
     3721 atcagcgttt ccagctagga gctgaatcgg ctttgatgcc gtatttctca atggcttgtt
     3781 gaacggtttc tttgctgact ttgccttgtt ccgccaatgc ggccaatgcg gccacggcaa
     3841 cgttgtagcg atccacttca aagaagcggc gcaggttggc gcgactgtcg gaacggccga
     3901 aaccgtcagt gcccaagacg tggtagtcgt tcgggatgta ggcgcggata cggtcagcat
     3961 agctgcggat atagtcggta gcggcaataa ccggaccgtc atgaccttgc agttgggaag
     4021 taacgaaagg tactttttcg gcttccagcg gatgcaggcg gttgaagcgt tctacctcga
     4081 cagcgtcgcg gtgcagcagg ttgaaggatg ggcaagacca aatgtctgct tccaagccga
     4141 agtcggcttt cagcagctcg gcaccggcaa tcacttcttg caaaatcgta ccggaaccca
     4201 tcagttggac tttcttgtcg cctttgccgc cggctttcag caggtacata cctttcaaga
     4261 tgtcttgttc cgcaccttcg ggcatatccg gatgggtgta gttctcgttc atcagggtga
     4321 tgtagtagaa cacgtcttca ttattggcat acatacggcg cagaccgtct tgtacgatga
     4381 cggcgacttc gtattggaaa gtcgggtcat aagatacgca gttcggaatc aggtcggcct
     4441 ggatgtggct gtggccgtct tcgtgttgca ggccttcgcc gttcagtgtc gtacggccgg
     4501 cagtaccgcc cagcaggaag ccgcgcgcgt gcatatcgcc cgccgcccaa gccaagtcgc
     4561 cgatacgttg gaaaccgaac atagaatagt aaatgtagaa cggaatcatg gcgaagttgc
     4621 tgttggcgta gctggttgca gccgcaatcc agtcggccat cgcgcccggt tcgttaatac
     4681 cttcttgcaa gatttgaccg tcaacggatt ctttatagaa catcagttgg tctttgtctt
     4741 gaggggtata ttgctgacct ttcggattcc aaataccgta ttggcggaac ataccttcca
     4801 tgccgaaagt acggctttcg tcgggaacga taggtacgac gcgtttgccg atttttttgt
     4861 ctttcagtaa agtggacagg atgcggacga atgccatcgt ggtcgagaac tcgcgttcac
     4921 cgctggattt gagttgtgcg tcgaatgctg acagctcggg cacttccaat acttcctgcg
     4981 tcggtttgcg ttgcggcagg tagccgccca aagcatcgcg gcgtgcgtgc aggtatttgt
     5041 attcttccgt atcgggggca aaagtcaggt aaggcagatc gccgctttcg atttgttcgt
     5101 cggtaaccgg aatgtcaaag cggtcgcgga attgtttcag ggacgctttg tccatttttt
     5161 tggcttggtg ggcaacgttc tgaccttcgc cggatgcgcc cataccgtaa cctttaatgg
     5221 ttttcgccaa gatgacggta ggtttgccgt cggcatggtt cgctgcgcgg tcgtaggcgt
     5281 tgtacacttt ttgcgggtcg tggccgccgc ggttcaatgc ccagagttgc tcatcggtca
     5341 tatcggcaac caatgctttc agttcgggcg tattgaagaa gtgttcgcgc acatacgcgc
     5401 cgtctttgga tttgtaagtt tggtagtcgc cgtccaaaca ttcttccata cgttggcgca
     5461 ggataccgtc tttgtctttc gccaagaggc ggtcccagcg gcggccccaa atgactttga
     5521 cgacattcca gccggcgccg gcaaagttgc cttccaattc ttggatgatt ttgccgttgc
     5581 cgcgtaccgg accgtccaag cgttgcagat tgcagttgat gacgaaaatc aggttgtcca
     5641 agccttcgcg tgcagccagt gcgattgcac cttgagattc gggttcgtcc atttcgccgt
     5701 cgccgcagaa acaccatact ttacggcctt tggtttttgc caaaccacgc gattccaagt
     5761 atttcaggaa acgcgcctga taaatcgcca tgatgggtcc caagcccatg gatacggtcg
     5821 ggaactgcca aaagtcgggc aagaggtggg ggtgcggata ggaaggcaga ccgtgtccgt
     5881 ccacttcttg gcggaagttg ttcagctggt cttcggtcag acggccctcg acgaatgcgc
     5941 gtgcatagat gcccggggcg acgtgacctt ggaagaagac caaatcgcct tcttcgcctt
     6001 cgcctttggc tttccaaaag tggttgaaac cgacttcgta catggtggcg gcagattgga
     6061 aagatgcgat gtgcccaccc agttccaaat ctttcttgcc ggcgcgcaat acgatggcgg
     6121 cggcgttcca gcgcacgaat gcgcggatgc ggtgttcgat gttttggtcg cccggaatgc
     6181 ctttttcgtt ttcaaccgaa acggtattca aatacggggt ggtcgtgccg tgtggcatac
     6241 gtacgccctt gtcgcggcag tatttgacca ggttttccaa gaggtattgc gcgcgttcgc
     6301 cgccttcata ttcgaggacg gagcttaacg cgtccagcca ctcttgggtt tcgatagggt
     6361 caacatcgtg taattgggtg gacatagtat ctatccttta tgttgagtgt ttaatcggca
     6421 gggagggtgt agccaacccc tttattttcg tttgtgaaaa ataataagca aaaacgaaaa
     6481 tttctaaatc aaaccgaaaa aaaataattt aagtttaatg ttttcaaaaa attataaaag
     6541 ttttggaaac aagggaaaac ttgaaaaaaa tgttcgatct gctccacacg aaatcctatc
     6601 agcaatcggg tctgctggca aataaccatg cctgtaaaag caggttttat actgaagttg
     6661 gcgtttggta aggtcaagtc tttttgattt cgaaatattc tgtttgattt tggcgatatt
     6721 ttttcggaat tgtggtatat cgaatcatta tgtctctgtc ggcaattttc ctattgtaga
     6781 aaatctatac acaagctttg tggataaccg tgttgataag ccacggcttg tgttaaaaaa
     6841 gtcttacgca acaaatgtac gcttattttg attaaaaaat aggcacattt aaatctataa
     6901 aaatcatgtg cttatgttca atatgatgtt tctggtcatg tttttgccgt ctgttatggg
     6961 atttgtcccg cgcttggggc agggggtgaa ttttggaggt tggtgcaaaa cctgcttttt
     7021 tcgcgttaca atctgcaccc gatttacttt tgaatttgcc tgtttggaaa aatactttta
     7081 tgaaagccag ccaattcttt atctctactt taaaagaagc ccctgccgaa gccgcgcttg
     7141 ccagccacaa gctgatgatt cgcgccggtc tgattaaagc caacgcgtcc ggcctttata
     7201 cttggatgcc gatggggctg cgcgtgttac gcaaagtcga aaacgtcgtg cgcgaggaaa
     7261 tggcgcgcgc gggcagtgtg gagctgctga tgccggtggt gcagcctgcc gagctgtggc
     7321 aggaatccgg ccgctgggag ttttacggta aagaactgct gcgcctgaaa gaccgccacg
     7381 accgcgattt ctgcatgggc ccgacctgcg aggaagtcat cgccgacatc gtgcgtaaag
     7441 agatcaacag ctacaaacaa ctgccgaaaa acttttacca catccaaacc aaattccgtg
     7501 acgaagtgcg cccgcgcttc ggtgtgatgc gtgcgcgcga gtttgtcatg aaagacgctt
     7561 attccttcca taccgactac gcctcgcttc agacgaccta tgatgccatg tatgacgctt
     7621 actgccgtat cttcacccgt ctgggcttgg aattccgccc cgttgccgca gataccggca
     7681 gcatcggcgg tacgggttcg cacgagtttc aagtgttggc ggaaagcggc gaagatgtta
     7741 ttgcgtacag cgacacttcc gattacgccg ccaatatcga gttggccccg accttgccgc
     7801 ttaaaggcga acgcgccgct gctcaggcag aactcgtcaa agtacacacg ccaaacgtca
     7861 aaaccattga gtctttggtt gaattcctga atattccggt tgaacaaacc ctcaaatcca
     7921 tcgtggttga aggcgaaaac gaaggcgaaa tcgttttatt gctgttgcgc ggcgaccatg
     7981 agttcaacga catcaaagcc gaaaaactcg caggcgtgaa atcgccattg acgatggcaa
     8041 gtcctgccgc gattgtcgaa cagttcggcg caaacggcgg ctcgctgggt ccggtcggct
     8101 ttgcaggtaa agtttatgcc gatttcgcca ctgaaaaaga cggggactgg gtcatcggtg
     8161 cgaacgaaga cggctaccac tacaccggct tcaacttcgg gcgcgacgct gccgagcctg
     8221 aatttgtcga tttgcgcgat gtcgtcgaag gtgacgaaag ccccgacggg caaggccgtc
     8281 tgaaactggc gcgcggcatc gaagtcggac acgttttcca attgcgcgac aaatacaccc
     8341 aagccatgaa cgtaagcttc cttgacaaca acggcaaatc gcaaatcatg gaaatgggct
     8401 gctacggtat cggcatcacc cgcgtcgtcg ccgccgccat cgagcagaat aacgacgaaa
     8461 aaggcatcat ctggaccaaa gcaatggcgc cgtttgaagt cgttatcgtg ccgatgaact
     8521 acaaaaaatc agacaccgta cgcgaagccg ccgacaaaat ctatgccgaa ttgctggcgg
     8581 caggcgcgga tgtgctgctg gatgaccgcg acgaacgcgc aggcgtattg ctgaacgatt
     8641 ccgagctgtt gggcatcccg caccgcatcg tcatcggcga ccgcgccttg aaagaaggca
     8701 atgtcgaata cgccgaacgc cgcaacaacg aagcgcaggc agttgcaatc ggagaaattg
     8761 ttgcgcgtgt aacagcttca ttaaatgggt aagcttggtc aaatgccgtc tgaaaataat
     8821 ttcagacggc atttttattt ggggagaaag tgaagtggcc tcagtatttt tagaaggaga
     8881 agcagtcgag gtcggcaata ttttctgtat cggcaggaac tatgccgcac atattgaaga
     8941 gttaaaaaac gaaatacctt ccgaacctgt ggtgtttatg aagccgtcag gcagcatttt
     9001 gaatagcggc ggtacaatct tactgcccga gttcagtagg gatgtgcagt ttgagtgcga
     9061 actcgtgctg ctggtcggta aggattcaga cggcatggga gagggtgaag atattttggg
     9121 atgtgtggcg gggtacggcg tgggtttgga tttgaccgcg cgagacatcc aatgccatct
     9181 gaaggcgcag gggctgccct ggctgaaggc aaaagggttc aggcattccg cgtgcgtgtc
     9241 ggattttgcg gcggcaggca gaatcagcaa tcccgagaag gtgttgtttt cattaaaaca
     9301 aaacggcgta ttgaaacagc gcggggatac cggtttgatg atttacccga ttcgggaaat
     9361 tttacacaaa ctggcggcgg attacggttt ggggaaaggg gatttggtgt ttaccggaac
     9421 gccctccggc gtgggcgcaa tcggtgcggg ggacaatttg gcattggagc tggacggctt
     9481 ggtgcgcgcc tctttcacgg tagggtgtta accgcgccgc ttaaccctca cgcccgttga
     9541 aacattccgc cggaccgccc tcgaaaaaac cgtgcaagat ggcttgcgcc gccacttggt
     9601 cgagcaccga tttgcgtttt ttgccgaaga cctgtgcttc cgaaagcagg ctttcggcat
     9661 agacagacga cagccgttcg tcaacccaat agacggggag attgaacctg ccgttcagcc
     9721 tgcgtccgaa cttgcgcgac aggtgcgtca tttcatgttt cgtgccgtcg gtatgcacgg
     9781 gcagtccgac gacaaaataa tgcggctgcc attcttgaac cagcttggcg attgccgcga
     9841 acttttcatc gttgctgccg ccggtaacgg tgctcaaagg atgggatagc cctaattccg
     9901 cgtctccttg tgccacgccg atacgcgctt cgccgaagtc gaatgccagt gccgttcctt
     9961 ttggaatttt atgcatggcc ggctcccgaa aacagggcga gcgggtcgat gccgagtttg
    10021 gcgaatgcgg cggcgtaacg gtgttcgtag gggatgtcga acaggatgtg ttcgtcggcg
    10081 ggaacagtca gccacgtatt gtcggcaagt tcgcgttcga gctggccttt tccccagctt
    10141 gaatagccta tgctgatcaa ggctttgtca accgcacctt cgcgtgaaat attttcaatc
    10201 acgtctcggg aagaagttag cgcgatattg tctgaaacgc cgatactgct ttgccagttg
    10261 ccgatcgggg tatgcacgac ataacctcgc tcgacttgca ccggcccgcc catcatcacg
    10321 ctgtcgtgct gcatccgcat ggggatgttt ttgccggtgg cggaaaaaat catgtccatc
    10381 gtaatcggag agggtttgtt gatggcgatg ccgagtgcgc cgtcttcatc gtgtttgcag
    10441 atatagacga ccgattgtga aaaaaacgcg tcttccatat cgggcatggc gacgagaaag
    10501 tggttggaga ggttcatatc agcgtttgtc gggattttct atcgggttgg aaatcatgca
    10561 ggcgccggca agcaggttgc cggaagtatc ggcttgcacc ccatcggttt gcggtatgcc
    10621 gccgccgaaa caggaaaccg cgcttaagga atttttcggc gagccttgga tgattttatc
    10681 gctgtacacc aaataggcga aggttttgcg tttggggtcg taataacgga caatctgccg
    10741 gctcttgaac gcgaagctcg caccgtgttt gaaaacttct ttcggtttgc gcacggcggt
    10801 ttcgtcaaaa gaaatcgaag atgccgtctg aacgcacgaa accgatgcgt cggacgcgtc
    10861 ctcttccaaa ttgaccattt ccttcaagcc gccttttttt gcatacgaaa tataacaggc
    10921 aaccccttga acgtcgggat cgtcgaatcc ttccacttcg atacggtcgt ttttgcccag
    10981 catgttgaaa acggtacttg cccgtccgat tttatcggtt tcgccgctgc cgcaggcagt
    11041 cagcaggacg gcggcagaca gcagtagcag tctgttcatc aaaatttcct tatcggttga
    11101 atccccgttt tccgtgaagg cggcagggct tgctttgttt ggaggggcgc acgttcccaa
    11161 aatcgggcaa cataacggta tgcggcttaa tgtgctaccc tgtgtgtcgg aacacaatat
    11221 ccgttgcggc attgaaaata tgacgcacaa tataaggctg tttgagccga ttgcaagtat
    11281 ccgcgcaaag aaggcgcaag attgggcaaa cggcattttc agacggcata actgacagta
    11341 taatccaaac gtccggctgc tttcgtgcag ccttcagtat tatccaactt tttccgaagg
    11401 tcgaaccatg cgctacaaac cccttctgct tgccctgatg ctcgtttttt ccacgcccgc
    11461 cgttgccgcc cacgacgcgg cacacaaccg ttccgccgaa gtgaaaaaac agacgaagaa
    11521 caaaaaagaa cagcccgaag cggcggaagg caaaaaagaa aaaggcaaaa atggcgcagt
    11581 gaaagataaa aaaacaggcg gcaaagaggc ggcaaaagag ggcaaagagt ccaaaaaaac
    11641 cgccaaaaac cgcaaagaag cagagaagga ggcgacatcc aggcagtctg cgcgcaaagg
    11701 acgcgaaggg gataagaaat cgaaggcgga acacaaaaag gcacatggca agcccgtgtc
    11761 cggatccaaa gaaaaaaacg caaaaacaca gcctgaaaac aaacaaggca aaaaagaggc
    11821 aaaaggacag ggcaatccgc gcaagggcgg caaggcggaa aaagacactg tttctgcaaa
    11881 taaaaaagtc cgttccgaca agaacggcaa agcagtgaaa caggacaaaa aatacaggga
    11941 agagaaaaat gccaaaaccg attccgacga attgaaagcc gccgttgccg ctgccaccaa
    12001 tgatgtcgaa aacaaaaaag ccctgctcaa acaaagcgaa ggaatgctgc ttcatgtcag
    12061 caattccctc aagcagcttc aggaagagcg tatccgccaa gaacgtatcc gccaagagcg
    12121 tatccgtcag gcgcgcggca accttgcttc cgtcaaccgc aaacagcgcg aggcttggga
    12181 caagttccaa aaactcaata ccgagctgaa ccgtttgaaa acggaagtcg ccgctacgaa
    12241 agcgcagatt tcccgtttcg tatcggggaa ctataaaaac agccagccga atgcggttgc
    12301 cctgttcctg aaaaacgccg aaccgggtca gaaaaaccgc tttttgcgtt atacgcgtta
    12361 tgtaaacgcc tccaatcggg aagttgtcaa ggatttggaa aaacagcaga aggctttggc
    12421 ggtacaagag cagaaaatca acaatgagct tgcccgtttg aagaaaattc aggcaaacgt
    12481 gcaatccctg ctgaaaaaac agggtgtaac cgatgcggcg gaacagacgg aaagccgcag
    12541 acagaatgcc aaaatcgcca aagatgcccg aaaactgctg gaacagaaag ggaacgagca
    12601 gcagctgaac aagctcttga gcaatttgga gaagaaaaag gccgaacacc gcattcagga
    12661 tgcggaagca aaaagaaaat tggctgaagc cagactggcg gcagccgaaa aagccagaaa
    12721 agaagcggcg cagcagaagg ctgaagcacg acgtgcggaa atgtccaacc tgaccgccga
    12781 agacaggaac atccaagcgc cttcggttat gggtatcggc agtgccgacg gtttcagccg
    12841 catgcaagga cgtttgaaaa aaccggttga cggtgtgccg accggacttt tcgggcagaa
    12901 ccggagcggc ggcgatgttt ggaaaggcgt gttctattcc actgcaccgg caacggttga
    12961 aagcattgcg tcgggaacgg taagctatgc ggacgagttg gacggctacg gcaaagtggt
    13021 cgtggtcgat cacggcgaga actacatcag catctatgcc ggtttgagcg aaatttccgt
    13081 cggcaagggt tatatggtcg cggcaggaag caaaatcggc tcgagcgggt cgctgccgga
    13141 cggggaagag gggctttacc tgcaaatacg ttatcaaggt caggtattga acccttcgag
    13201 ctggatacgt tgatcggatt gccgaaacgg taggctttat gcaaatcgtg ccgatatggt
    13261 gcgctgttcc gtgaagtttg ccgtttgccg tacctgtatt ttccggtttt tggaaatcaa
    13321 gagagaaagt taaagaagaa tgtcgaaacc tgtttttaag aaaatcgcac tttatacttt
    13381 gggtgcaatc agcggcgtgg ccgtcagtct ggcggtgcag ggttttgccg ccgagaagga
    13441 caggcgggat aacgaagtcc tgccggtgca atccatccgc acaatggcgg aggtttacgg
    13501 tcaaatcaag gcaaactact atcaggacaa acccgatgcc gatttgtttg aaggtgcgat
    13561 gaagggtatg gtggccggtt tggatccgca ttccgaatat atggataaaa aaggttatgc
    13621 cgagataaag gagtccacca gcggcgaatt tggcggcttg gggatggaaa tcgggcagga
    13681 agacggattt gtcaaagtgg tttcgccgat tgaggacacg cctgcggaac gggcgggggt
    13741 gaaaagcggc gatttcattg tgaaaatcga taatgtttcg acacgcggca tgacggtcag
    13801 cgaagcggtg aagaaaatgc ggggcaagcc aggtacgaag attactttga cgctgtcgcg
    13861 caaaaatgcc gacaagccga tagtcgtcaa cctgacccgt gccattatta aagtgaaaag
    13921 cgtccgccat cacctgatcg aacccgatta cggctatatc cgcgtgtcgc agttccaaga
    13981 gcggacggtc gaaagcgtca ataccgccgc aaaagagctg gtaaaggaaa ataaaggaaa
    14041 accgctcaag gggctggtgt tggatttgcg cgacgacccc ggcgggcttt tgactggcgc
    14101 ggtcggcgtg tcggcggcgt ttctgccgtc tgaagcagtc gtcgtcagca ccaagggacg
    14161 cgacggcaaa gaccgcatgg tactgaaagc cgttcctgaa gattatgtgt acgggatggg
    14221 cggcgattct ttggcgggca ttcctgccga gttgaaaacc ataccgatga cggtattggt
    14281 caattccggt tcggcttccg cgtcggagat tgtcgcaggt gcattgcagg atcataaacg
    14341 cgcggtcatc gtcggtacgc agagcttcgg caaaggttcg gttcagactt tgattccttt
    14401 gtccaacggc agcgcggtca agctgacaac ggcactgtat tatacgccga acgaccgttc
    14461 tattcaggcg caggggattg ttcccgatgt cgaagtaaaa gataaggaac gcatttttga
    14521 aagccgcgag gcggatttgg tcggacacat cggcaatcct ttgggcggcg aggatgtgaa
    14581 cagtgaaacc cttgccgtgc cgcttgaaaa agatgcggat aagcccgctg taaaagaaaa
    14641 aggtaaaaag aaaaaggacg aggatttgtc ttcaaggcgg attcccaacc ctgccaaaga
    14701 cgaccagttg cggaaagctt tggatttggt caagtcgccc gagcagtggc agaagtcttt
    14761 ggggctggcg gcgaaaaagc cggtttcaaa taaagataag aaagataaaa aagataagaa
    14821 gtaggttttt acgatgccgt ctgaaaggat ttcagacggc atattatgtt tgaaaggaca
    14881 ggttatgagc gattttttac cggaatttga accgtgcggc
//
LOCUS       DAWKJW010000034        14843 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.034, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000034 DAWKJW010000000
VERSION     DAWKJW010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14843
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.034"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            35..922
                     /gene="prmA"
                     /locus_tag="WJJ54_000761"
     CDS             35..922
                     /gene="prmA"
                     /locus_tag="WJJ54_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEZ7341652.1"
                     /translation="MPYQQITVNVNDAVAERLADALMEHGALSAAIEDAYAGTQNEQA
                     IFGEPGMPAEQIWQQSKVIALFGEHDEAAAIIQTAAQECGLKDLAYTGEILEDQDWVR
                     LTQAQFDPIRISERLWITPSWHEAPEGTAVNLRLDPGLAFGTGSHPTTRLCLKWLDTQ
                     LKNGESVLDYGCGSGILTIAALKLGAGFAVGVDIDEQAVRAGKDNAEQNNVDAQFFLP
                     DGLPQGQFDVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQAEELGGIYSQWF
                     DLDPAETEEGWARLSGTKR"
     gene            940..1503
                     /gene="orn"
                     /locus_tag="WJJ54_000762"
     CDS             940..1503
                     /gene="orn"
                     /locus_tag="WJJ54_000762"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HEZ7341653.1"
                     /translation="MQDKNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEV
                     YAVHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPGRATP
                     MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNPPVAKSVVKRGSHKAL
                     DDILESIEEMRHYREHFLISAPRAEAQ"
     gene            complement(1754..3037)
                     /gene="hemL"
                     /locus_tag="WJJ54_000763"
     CDS             complement(1754..3037)
                     /gene="hemL"
                     /locus_tag="WJJ54_000763"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEZ7341654.1"
                     /translation="MNRNEILFDRAKAVIPGGVNSPVRAFGSVGGVPRFIKKAEGAYV
                     WDENGTRYTDYVGSWGPAIVGHAHPEVIEAMREAALGGLSFGAPTEGEIVIAEEIAKI
                     MPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTF
                     GNPSSAGVPADFTKHTLVLEYNNIAQLEEAFAQSGNDIACVILEPFVGNMNLVRPSEA
                     FVKALRELTEKHGAVLIYDEVMTGFRVALGGAQSLHGITPDLTTMGKVIGGGMPLAAF
                     GGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIRREGFYENLTARTEQLVQG
                     FRTAADAAGIEFTADSVGGMFGLYFAAHAPRNYADMARSNIEGFKQFFHGMLDRNVAF
                     GPSAYEAGFVSAAHTPELIDETVAVAVEVFKAMAA"
     gene            complement(3101..3514)
                     /locus_tag="WJJ54_000764"
     CDS             complement(3101..3514)
                     /locus_tag="WJJ54_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEZ7341655.1"
                     /translation="MKPAVWAALLLCACTSNFGDREHQFLRDQTEEKIVQFAVRGKTT
                     RAEVEARFGRQNPFGCYAYHEVSLPIYNFLPTNFIYMKSERRHWEWCVDYDWEGVVRD
                     YRFTHKVEKDERSVIRDAVGVIRKEAGKSLSQPEK"
     gene            3717..5045
                     /gene="miaB"
                     /locus_tag="WJJ54_000765"
     CDS             3717..5045
                     /gene="miaB"
                     /locus_tag="WJJ54_000765"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEZ7341656.1"
                     /translation="MKKVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADII
                     LFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVV
                     FGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDF
                     ATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSA
                     MKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSF
                     VFIYSPRPGTPAANLPDDTPHEEKVRRLEALNEVIEAETARINQTMVGTVQRCLVEGI
                     SKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKTVSI"
     gene            complement(5130..7037)
                     /gene="dxs"
                     /locus_tag="WJJ54_000766"
     CDS             complement(5130..7037)
                     /gene="dxs"
                     /locus_tag="WJJ54_000766"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEZ7341657.1"
                     /translation="MNPSPLLDLIDSPQDLRRLDKKQLPRLAGELRAFLLESVGQTGG
                     HFASNLGAVELTIALHYVYDTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAG
                     FPKRSESEYDAFGVGHSSTSIGAALGMAAADKLLGSDRRSVAIIGDGAMTAGQAFEAL
                     NCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDMHGLLSTVKAQTGKVLDKI
                     PGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR
                     SRKGPQLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQMPSENKPAAKPTYTQVF
                     GKWLCDRAAADERLIAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLACE
                     GMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSFLR
                     CVPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPRGTGTGAPVSDGMETVEIGKGII
                     RREGEKTAFIAFGSMVAPALAVARKLNATVADMRFVKPIDEELIVRLARSHDRIVTLE
                     ENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTGHGDPKKLLDGLGLSAEAVERRV
                     RAWLSDRDAAN"
     gene            complement(7122..8039)
                     /gene="xerC"
                     /locus_tag="WJJ54_000767"
     CDS             complement(7122..8039)
                     /gene="xerC"
                     /locus_tag="WJJ54_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HEZ7341658.1"
                     /translation="MVLDGFAAHFDAYLENIVREGKSEHTVAAYRRDLEELFALLAQM
                     PSEAEGGVPQGLSRRDFTAALRRLSQRGLNARTLARKLSSWRQYCAWLVKRGLLHTDP
                     TADIKPPKQPERVPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIH
                     GLNADDVYLDEAWVHVTGKGRKQRQVPLTGKSVEALKNYLPLRQTASDGKALFTGRNG
                     TRLSQRQIQKRLAQWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLS
                     TTQIYTKLDFDHIARLYDEAHPRAKRQDE"
     gene            8233..9297
                     /locus_tag="WJJ54_000768"
     CDS             8233..9297
                     /locus_tag="WJJ54_000768"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase class II"
                     /protein_id="HEZ7341659.1"
                     /translation="MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAP
                     VIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSV
                     MMDGSLLEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGV
                     GAAGKLSHDQMLTGVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIK
                     EIHQALPNTHIVMHGSSSVPQEWLKVINEHGGKIGETYGVPVEEIVEGIKHGVRKVNI
                     DTDLRLASTGAVRRYLAENPSDFDPRKYLSKTIEAMKQICLDRYLAFGCEGQAGKIKP
                     VSLEKMANRYAKGELNQIVK"
     gene            9317..10279
                     /locus_tag="WJJ54_000769"
     CDS             9317..10279
                     /locus_tag="WJJ54_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="factor H-binding protein"
                     /protein_id="HEZ7341660.1"
                     /translation="MPSEPLFGRHLIFASLTCLIDAVCKKRYHNQNVYILSILRMTRS
                     KPVNRTAFCCFSLTAALILTACSSGGGGVAADIGAGLADALTAPLDHKDKGLQSLTLD
                     QSVRKNEKLKLAAQGAEKTYGNGDSLNTGKLKNDKVSRFDFIRQIEVDGKLITLESGE
                     FQVYKQSHSALTALQTEQVQDSEDSGKMVAKRQFRIGDIAGEHTSFDKLPKGGSATYR
                     GTAFGSDDAGGKLTYTIDFAAKQGHGKIEHLKSPELNVELATAYIKPDEKRHAVISGS
                     VLYNQDEKGSYSLGIFGGQAQEVAGSAEVETANGIHHIGLAAKQ"
     gene            10419..11096
                     /gene="tsaB"
                     /locus_tag="WJJ54_000770"
     CDS             10419..11096
                     /gene="tsaB"
                     /locus_tag="WJJ54_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEZ7341661.1"
                     /translation="MQADFNRPVLAIDTGTSYLSLALRADGETHLFHQEAGSRQSELI
                     LPEIRTLFRNAGITAADLGAIVYTKGPGAFTGLRIGIGVAQGLATPFDTPLIGIPTLD
                     AAASLPPPQSCILAAADARMGEVFYAWFDTLNRRRLSDYQVGRAADIRLPEGCAFSDG
                     IGSAFALEETPPFSGKPDMPTAADFLNLAAEGGFPAVAAAHSELLYVRNKIALTAKEQ
                     AERKART"
     gene            11093..11533
                     /gene="rimI"
                     /locus_tag="WJJ54_000771"
     CDS             11093..11533
                     /gene="rimI"
                     /locus_tag="WJJ54_000771"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEZ7341662.1"
                     /translation="MNIRRASPSDCAALAALDAVCNPSAWTQRQFESALVSPSEQVFL
                     AEKDGGIAAFIVWQNLPDESELHLIATAPECRRRGVASALLEYWFAHLPEDTQRLLLE
                     VRAGNTAAQALYAAHGFTDAGRRKNYYRTADGKTEDAVLMEKIC"
     gene            11527..12264
                     /locus_tag="WJJ54_000772"
     CDS             11527..12264
                     /locus_tag="WJJ54_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEZ7341663.1"
                     /translation="MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARPQTV
                     RAAPIRPSQPHNGQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGIT
                     KLAVVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMP
                     SEAAIETATVSVMQELDGCRAPAVLFLGQAFVQPERQTMIETLCGSRPFFIIDHPARL
                     LRQPELKARAWQVLKQLKRALRQGGGS"
     gene            12326..12967
                     /gene="pyrE"
                     /locus_tag="WJJ54_000773"
     CDS             12326..12967
                     /gene="pyrE"
                     /locus_tag="WJJ54_000773"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEZ7341664.1"
                     /translation="MTDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNAGLFNDGL
                     STLQLAKFYAQSIIESGIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAK
                     DHGEGGVLVGAPLKGRVLIIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGT
                     GELSAVQEVEKQYGLPVAPIASLNDLFILLQNNPEFGQFLEPVRAYRRQYGVE"
     gene            13041..13475
                     /locus_tag="WJJ54_000774"
     CDS             13041..13475
                     /locus_tag="WJJ54_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341665.1"
                     /translation="MPACFCPHCKTRLWVKETQLNVAQGFVVCQKCEGLFKAKDHLAS
                     TKEPIFNDLPEAVSDVKLVHRIGTRAIGKKQISRDEIAGILNGGTTQPDIPPATAATP
                     AAAPQVTVPPAAPARQEGFNWTIATLFALIVLIMQLSYLVIL"
     gene            13472..14782
                     /gene="argA"
                     /locus_tag="WJJ54_000775"
     CDS             13472..14782
                     /gene="argA"
                     /locus_tag="WJJ54_000775"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HEZ7341666.1"
                     /translation="MSAPDLFVAHFREAAPYIRQMRGKTLVAGIDDRLLEGDTLNKLA
                     ADIGLLSQLGIRLVLIHGARHFLDRHAAAQGRTPHYCRGLRVTDETSLEQAQQFAGTV
                     RSRFEAALCGSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRF
                     QLDAGNIVWLPPLGHSYSGKTFHLDMLQTAASVAVSLQAEKLVYLTLSDGISRPDGTL
                     AVTLSAQEAQSLAEHAGGETRRLISSAVAALEGGVHRVQILNGASDGSLLQELFTRNG
                     IGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHD
                     GNLYGCAALKTFTEADCGEIACLAVSPQAQDGGYGERLLAHIIDKARGIGISRLFALS
                     TNTGEWFAERGFQTASEDELPETRRKDYRSNGRNSHILVRRLHR"
BASE COUNT         3395 a         4647 c         3853 g         2948 t
ORIGIN      
        1 aattcaatcc actatatttc caagaaagcc cgttatgccc taccaacaaa tcaccgtcaa
       61 cgtcaacgat gccgtcgccg aacgcctcgc cgacgcgctg atggaacacg gcgcactctc
      121 cgccgccatc gaagatgcct acgccggcac gcaaaacgaa caggcgattt tcggcgaacc
      181 cggtatgccc gccgaacaaa tctggcagca gagcaaagtc atcgccctgt tcggcgaaca
      241 cgacgaagcc gccgccatca tccaaaccgc cgcacaagaa tgcggattaa aagacttggc
      301 atacaccggc gaaatcctcg aagaccaaga ctgggtacgc ctgacccaag cgcaattcga
      361 ccccatccga atttccgaac gcctgtggat taccccctct tggcacgaag cccccgaagg
      421 cactgccgtc aacctacgcc tcgatcccgg cctcgccttc ggcaccggca gccacccgac
      481 cacgcgcctc tgcctcaaat ggctggatac gcaactcaaa aacggcgaaa gcgtcctcga
      541 ctacggctgc ggttcgggca tcctgaccat cgccgccctc aaactcggtg caggtttcgc
      601 cgtcggcgtg gatattgacg aacaagccgt ccgcgccggc aaggacaacg ccgaacagaa
      661 caacgtcgat gcacaattct tcctgcccga cggtctgcct caagggcaat tcgacgtagt
      721 tgtcgccaac atcctcgcca accctttacg tatgctcggc gaaatgctcg ccgcccgcac
      781 caaacaaggc ggccgcatcg tgttatccgg tttgttggac gaacaagccg aagaactcgg
      841 cggcatttac agccaatggt tcgatctcga cccggcggaa accgaagaag gctgggcgcg
      901 cttgagcggg acaaaacgct gaaacggaaa ggaaacaccg tgcaggacaa aaacaacctc
      961 tgctggctcg atatggaaat gacggggctt aatcccgaaa ccgaccgcat tatcgaagtc
     1021 gcgatgatta ttaccgactc ggatttgaat gtgttggcgc aatccgaagt ttacgccgtc
     1081 caccaaagtg acgagctgct cgacaatatg gacgagtgga acaccgccac acacggcagg
     1141 acggggctga cgcagcgcgt acgcgaatcg tcgcataccg aagccgaagt cgaacagaaa
     1201 ctgctggact ttatgtcgga atgggtaccc ggacgcgcca cgccgatgtg cggcaactcc
     1261 atccaccaag accggcgttt tatggtcaaa tatatgccga aactggaaaa ctacttccac
     1321 taccgcaacc ttgacgtttc cacgctgaaa gaactcgcca aacgctggaa tccgcccgtt
     1381 gccaaaagcg tggtcaaacg cggttcgcac aaggcattgg acgacatttt ggagagcatc
     1441 gaagaaatgc gccactaccg cgaacacttt ctgatttccg ccccgagagc cgaagcgcaa
     1501 taagaaacaa acaatgccgt ctgaaacgct gtttgcattt cagacggcat ttttacagca
     1561 gattgaaatc aaaaatatac acgcccgtca ttcccgcgca ggcgggaatc cggaaggtcg
     1621 ggcttgccgt tattttcaat cattacagaa actgaaaggt ctggattccc gcctgcgtgg
     1681 gaatgacggc ggtgtgcatt cttacttcaa tctgccaaac agatcgaaca gagaaactct
     1741 gtccgtcaaa acatcatgca gccatcgcct tgaacacttc aaccgcaacc gcaaccgttt
     1801 cgtcaatcag ctcgggcgta tgcgcggcag aaacgaaacc tgcttcataa gcggacgggc
     1861 cgaaggcgac attgcggtcg agcatcccgt ggaaaaactg tttgaagcct tcaatattgg
     1921 aacgcgccat atcggcataa tttcgcggcg cgtgtgcggc gaaatacaga ccgaacatac
     1981 cgcccacgct gtcggcggtg aactcgatgc ccgccgcatc cgctgccgtc cgaaaacctt
     2041 gaaccaactg ttcggtacgc gccgtcaggt tttcataaaa cccttcgcgg cggatgattt
     2101 ccagcgtttt caaaccggcg gcgacggcaa tcgggttgcc cgacaaggtg cctgcctgat
     2161 acacgccgcc cagcggggaa atacattcca taatgtcttt gcgtccgccg aacgcggcaa
     2221 gtggcatacc gccgccgatg actttgccca tcgtggtcag gtcgggcgtg atgccgtgca
     2281 gcgattgtgc gccgccgagc gcgacgcgga aaccggtcat cacttcgtcg taaatcaaca
     2341 ctgcgccgtg tttttcagtc aattcgcgca gggctttgac gaaggcttca gacggcctaa
     2401 ccagattcat attgccgaca aaaggctcca aaatcacaca ggcaatgtca ttgccgcttt
     2461 gagcaaaggc ttcttcgagt tgggcgatgt tgttgtattc gaggactaaa gtgtgtttgg
     2521 taaagtcggc aggcacaccg gcggaagagg gattaccgaa ggtgagcaga ccgctgcctg
     2581 ctttcaccaa caggctgtcg gaatggccgt ggtagcagcc ttcaaatttg atgattttgt
     2641 cacggccggt aaagccgcgt gccagacgga tggcggtcat ggtggcttcg gtaccggagc
     2701 tgacaaggcg cagccgttcg acggacggca tgattttggc gatttcttcg gcaatgacga
     2761 tttcgccttc ggtaggcgcg ccgaacgaca aaccgcccaa ggcagcttcg cgcatggctt
     2821 cgatgacttc ggggtgcgcg tgtccgacaa tcgcgggccc ccacgaaccg acatagtcgg
     2881 tgtagcgcgt gccgttttcg tcccaaacat acgcgccttc ggcttttttg ataaagcgcg
     2941 gcacgccgcc gacgctgccg aatgcgcgga ctggcgaatt cacaccgccg gggatgaccg
     3001 ccttggcgcg gtcgaataaa atttcgttac ggttcatatt tatcctcaaa tgccgcctga
     3061 acggcaggtt tcgggcttag aagcagaaag tcccatttta tcatttttca ggttgcgaca
     3121 aggatttgcc tgcttctttg cggatgacgc caaccgcatc ccggatgacg gaacgctcgt
     3181 ctttttccac tttatgtgta aagcggtagt cccggacaac tccttcccag tcgtaatcca
     3241 cacaccactc ccaatgtcgg cgttctgatt tcatataaat gaaattggtc ggcaaaaaat
     3301 tataaatcgg caggctgacc tcgtgatagg cataacagcc gaacggattt tgccgcccga
     3361 aacgcgcttc cacttccgcc cgggtcgtct tgcccctaac cgcaaactgc acgatttttt
     3421 cttccgtctg atcacgcagg aactgatgtt ccctgtcgcc gaaattgctg gtacacgcac
     3481 acagcagcaa tgccgcccac acagccggtt tcatacacac ctcccattaa agccaaacat
     3541 tatacagccg tcccgaccga ttaaattcat attttaaaac aatattctgt ttacaaaacc
     3601 cacatcgtgc tataatccgc accgattttc agacggcatc gtcatgccgt ctgaaatttt
     3661 ttcattccaa caacaatcag ccccgcgatt acggctgcct gagaaagaca caaaccatga
     3721 aaaaagtatt tatccgcacc ttcggctgcc agatgaacga atacgacagc gacaaaatgc
     3781 tcgccgtcct cgccgaagaa cacggcggca tcgaacaggt tacccaagcc gacgaagccg
     3841 acatcatctt gttcaacacc tgctccgtgc gcgaaaaagc acaggaaaaa gtcttctccg
     3901 atttggggcg cgtgcgtccg ctcaaagaaa aaaaccccgg cctcatcatc ggcgttgccg
     3961 gctgcgtcgc ctcgcaagaa ggcgaaaaca tcatcaaacg tgcgccttat gtggacgtgg
     4021 ttttcggccc gcaaacactg caccgcctgc ccaaaatgat tgtggacaaa gaaaccagcg
     4081 ggctgtcgca agtcgatatt tccttccccg aaatcgaaaa attcgaccac cttccgcccg
     4141 cccgcgtcga aggcggcgcg gcattcgtgt cgattatgga aggctgttcc aaatactgct
     4201 ccttctgcgt cgtcccctac acgcgcggcg aagaattctc ccgcccgctc aacgacgtat
     4261 tgacagaaat cgccaacctt gcccagcaag gcgtgaaaga aatcaacctc ttaggccaaa
     4321 acgtcaatgc ctatcgcggc gaaatggacg acggcgaaat ctgcgacttc gccaccctgc
     4381 tgcgtatcgt ccacgaaatc cccggcatcg aacgtatgcg cttcaccacc agccacccac
     4441 gcgagtttac cgactcgatt atcgagtgct accgcgacct gccgaagctg gtttcccacc
     4501 tgcacctgcc gattcaaagc ggttccgacc gcgtattgag cgcgatgaaa cgcggctaca
     4561 ccgctttgga atacaaatcc atcatccgca aactgcgcgc catccgtcct gatttgtgcc
     4621 tcagctccga ctttatcgtc ggcttcccgg gcgagaccga gcgcgagttc gagcaaacct
     4681 tgaaactggt gaaagacatt gccttcgact tgagctttgt ctttatttac agtccgcgcc
     4741 ccggcacgcc tgccgccaac ctgccggacg acacgccgca cgaagaaaaa gtgcgccgcc
     4801 tcgaagcttt gaacgaagtc atcgaagccg aaaccgcgcg catcaaccaa accatggtcg
     4861 gcacggttca acgctgcctg gtcgaaggta tctccaaaaa agaccccgac caactgcaag
     4921 cccgcaccgc caacaaccgc gtcgtcaact ttaccggcac gcccgatatg atcaaccaaa
     4981 tgatcgattt ggaaatcacc gaggcctaca ccttctccct gcgcggcaaa accgtcagca
     5041 tttgatttcc cccgccgcaa aaatgccgtc tgaagcgttt cagacggcat tttgccttgt
     5101 atcggcagac gatggcgcgg ccaggcggct taatttgccg catcccgatc cgacaaccac
     5161 gcgcgcacac gccgttccac cgcttcggca ctcaaaccca aaccgtccaa aagttttttc
     5221 ggatcgccgt gtccggttac ggtatcggca acgcccaaaa gcaaaacggg tttgcagatg
     5281 ccgtgtttcg ccaatacttc cagcaccgcg ccgcctgcgc cgccctgttc ggcgttttct
     5341 tcaagggtaa cgatgcggtc gtggcttcgg gcaaggcgga caatcaactc ttcgtctatc
     5401 ggtttgacaa agcgcatatc ggcgacggtg gcgttcagtt ttctggcgac cgccaatgca
     5461 ggggcgacca tactgccgaa ggcaatgaat gcggttttct caccttcgcg gcggataatg
     5521 cccttgccga tttccacggt ttccatgccg tctgaaaccg gcgcgcccgt acccgtgccg
     5581 cgcggatagc ggacggcggc gggcgcgtct gcctgatagc aggtcgaaag caacaggcgg
     5641 cattcgtttt catcgctcgg cgcggcgaca atcatgttcg gcacgcagcg caaaaagctc
     5701 aaatcgtaca gaccggcatg ggtcgggccg tccgcgccga cgatgcccgc gcggtcgacg
     5761 gcaaacaaaa cgggtaggtt ttgcagggcg atgtcgtgca ccagttggtc gtaggcgcgt
     5821 tgtaaaaagg tggaataaat cgccacgacg ggcttcatcc cttcgcaagc caaaccgccg
     5881 gcaaaggtaa cggcgtgctg ctcggcaatg ccgacatcga aataacggtc ggggaatcgt
     5941 tgttcaaact ccaccagtcc gctgccctcg cgcatcgcgg gcgtgatggc gatcaaacgc
     6001 tcgtctgccg ccgcccggtc gcacagccat ttgccgaaca cttgggtata ggtcggtttg
     6061 gcggcaggtt tgttttcaga cggcatttgc gccgcgcttt ctttgggcag gttggcgacg
     6121 gcgtggtatt tgacgggatc gttttcggcg agtttgtagc cgttgccttt tttggtaatg
     6181 acgtgcagca actgagggcc tttgcggctg cgcaagtctt tcaatacgtc caccagattt
     6241 tcgacgttgt gtccgtccac ggggccggtg tagcggaagc cgaagttttc aaacaaagac
     6301 agtgactgtt tggcgtgttc ggcttcttcg gcaagggttt tgattttatg ttcgactttt
     6361 tgggcaaact ccatcgcgcc gggtattttg tctaatacct tgcccgtttg cgctttgacg
     6421 gtactcaaca gtccgtgcat atcgcgcacg acgttgctgg caaggtattt gggcaacgca
     6481 ccgacgttgg gggaaatcga catttcgttg tcgttgagga cgaccagcaa atccacatcc
     6541 atatcgcccg cgcaattcaa ggcttcaaac gcctgccccg ccgtcatcgc gccgtcgccg
     6601 atgatggcga cgctgcggcg gtcgctgccc aagagtttgt ctgccgccgc catgcccaac
     6661 gccgcgccga tggatgtgga agaatgccct acgccgaacg cgtcgtattc cgactcgctg
     6721 cgttttggga agccagctaa accgccgtat tggcgcatgg tgtgcatctg gtttttcctg
     6781 cctgtcagga ttttgtgcgg atagctttgg tgtccgacat cccataccag cttgtcttcg
     6841 ggcgtatcgt acacatagtg cagggcgatg gtcagttcga ccgcgcccaa attgctggcg
     6901 aaatgcccgc cggtctgccc gacagattcc agcagaaagg cgcgcaactc gccggcaagg
     6961 cgcggcagct gttttttgtc cagacggcgc aaatcttgcg ggctgtcaat caggtcgagt
     7021 agggggcttg ggttcatggt gtgtcttttt tatgtgtcgt ccgggtgcaa cggccaatta
     7081 tatatcaaga gcgtgcggct gacggctgat tttgccgtat gtcattcgtc ctgccgcttg
     7141 gcgcgcgggt gggcttcgtc atacaggcgg gcgatgtggt cgaaatcgag cttggtataa
     7201 atctgcgtgg tcgaaaggct gctgtgcccg agcagctcct gcaccgccct gatgtcgcgc
     7261 gaagcctgca acaggtgtcc ggcgtagctg tggcgcatca tatgcggcga aacgtgcctg
     7321 ccgtcgccgt tttgcgccgc ccattgcgcc aaacgttttt ggatttggcg ttggctcagg
     7381 cgcgtgccgt tcctgccggt aaacagggct ttgccgtccg atgccgtctg acgcagcggc
     7441 agatagtttt tcagggcttc cacgcttttg ccggtcagcg gcacctgccg ctgcttgcgc
     7501 cctttgccgg taacgtgtac ccacgcctcg tccaaataga catcatctgc attcaagccg
     7561 tgtatctcgc tcacgcgcaa accgctgccg tacatcagct cgaacagggc gtgatcgcgc
     7621 accgccagcg ggtcgccgcc gtccacgggc aaatccagca tccggttcag ccattcctgc
     7681 ggcagtgctt tgggtacgcg ctcgggctgc ttcggcggtt tgatgtcggc ggtcgggtcg
     7741 gtatgcagca gaccgcgttt gaccagccag gcgcaatact gccgccaaga cgacagcttg
     7801 cgcgccagcg tccgcgcatt caaaccgcgc tgcgacagcc gccgcaacgc cgccgtaaaa
     7861 tcgcgccgcg acaagccctg cggcacgccg ccttcagctt cagacggcat ttgtgccaac
     7921 agcgcaaaca gttcttccaa atcgcgccgg tatgccgcca ctgtgtgctc cgacttgccc
     7981 tcgcgcacga tgttttccaa ataagcgtca aaatgcgccg caaacccgtc caaaaccata
     8041 accgccccac acaaatatca aaaaaacagt gaaaacatta tcataaacga cacaccaaaa
     8101 ccccgaactg cccaaaatcc gacccgtccg cccgccgtta tcgttaacat aaaatcaatg
     8161 agccgtttat ggttttttgc cgcaaaaaac attataatcc gccttattta cctattgccc
     8221 aaggagacac aaatggcact cgtatccatg cgccaactgc ttgatcatgc tgccgaaaac
     8281 agctacggcc tgcccgcgtt caacgtcaac aacctcgaac aaatgcgcgc catcatggag
     8341 gcggccgacc aagtcaacgc ccccgtcatc gttcaagcat ccgccggcgc gcgcaaatac
     8401 gcgggcgcgc cgtttttgcg ccacctgatt ttggcggcag tcgaagaatt tccgcacatc
     8461 ccagtcgtga tgcaccaaga ccacggcgca tcgcccgacg tgtgccaacg ctccatccaa
     8521 ctgggttttt cttcggtaat gatggacggc tcgctgctcg aagacggcaa aaccccttct
     8581 tcttacgaat acaacgtcaa cgccacccgt accgtggtta acttctccca cgcctgcggc
     8641 gtatccgtcg aaggcgaaat cggcgtattg ggcaacctcg aaaccggcga agccggcgaa
     8701 gaagacggcg taggcgcagc gggcaaactt tcccacgacc aaatgctcac cggcgtcgaa
     8761 gatgccgtac gtttcgttaa agataccggc gttgacgcat tggcgattgc cgtcggcacc
     8821 agccacggcg catacaaatt cacccgtccg cccacaggcg acgtattgcg tatcgaccgc
     8881 atcaaagaaa tccaccaagc cctgccgaac acccacatcg tgatgcacgg ctccagctcc
     8941 gttccgcaag aatggctgaa agtcatcaac gaacacggcg gcaaaatcgg tgaaacctac
     9001 ggcgtgccgg ttgaagaaat cgtcgaaggc atcaaacacg gcgtgcgcaa agtcaacatc
     9061 gacaccgacc tgcgccttgc ctctaccggc gcggtacgcc gctaccttgc cgaaaatccg
     9121 tccgacttcg atccgcgcaa atatttgagc aaaaccattg aagcgatgaa gcaaatctgc
     9181 ctcgaccgct acctcgcgtt cggttgcgaa ggtcaggcag gcaaaatcaa accggtttcc
     9241 ttggaaaaaa tggcaaaccg ttatgccaag ggcgaattga accaaatcgt caaataacag
     9301 gttgcttgta aacaaaatgc cgtctgaacc gttgttcgga cggcatttga tttttgcttc
     9361 tttgacctgc ctcattgatg cagtatgcaa aaaaagatac cataaccaaa atgtttatat
     9421 attatctatt ctgcgtatga ctaggagtaa acctgtgaac cgaactgcct tctgctgctt
     9481 ttctctgacc gccgccctga ttctgaccgc ctgcagcagc ggagggggcg gtgtcgccgc
     9541 cgacatcggt gcggggcttg ccgatgcact aaccgcaccg ctcgaccata aagacaaagg
     9601 tttgcagtct ttaacactgg atcagtccgt caggaaaaac gagaaactga agctggcggc
     9661 acaaggtgcg gaaaaaactt atggaaacgg cgacagcctt aatacgggca aattgaagaa
     9721 cgacaaggtc agccgcttcg actttatccg tcaaatcgaa gtggacggga agctcattac
     9781 cttggagagc ggagagttcc aagtgtacaa acaaagccat tccgccttaa ccgcccttca
     9841 gaccgagcaa gtacaagact cggaggattc cgggaagatg gttgcgaaac gccagttcag
     9901 aatcggcgac atagcgggcg aacatacatc ttttgacaag cttcccaaag gcggcagtgc
     9961 gacatatcgc gggacggcgt tcggttcaga cgatgctggc ggaaaactga cctatactat
    10021 agatttcgcc gccaagcagg gacacggcaa aatcgaacat ttgaaatcgc ccgaactcaa
    10081 tgtcgagctt gccaccgcct atatcaagcc ggatgaaaaa cgccatgccg ttatcagcgg
    10141 ttccgtcctt tacaaccaag acgagaaagg cagttactcc ctcggtatct ttggcgggca
    10201 agcccaggaa gttgccggca gcgcggaagt ggaaaccgca aacggcatac accatatcgg
    10261 tcttgccgcc aagcagtaac cattgtgaaa atgccgtccg aacacgataa tttaccgttc
    10321 ggacggcatt tttgcgccat accgccctag gatacgacgg cacggcaggc aagccggttt
    10381 cactatataa tgccgtctga accaacgaga accataccat gcaagctgat tttaaccgtc
    10441 ccgtcctggc catcgatacc ggtacttcct atttgtcgct cgcgctgcgc gccgacggcg
    10501 aaacccacct gttccatcaa gaggccggca gccgccaatc cgaactgatc ctgccggaaa
    10561 tccgcactct attccgaaat gcgggcatta ccgccgccga tttgggggcg attgtttata
    10621 cgaaaggtcc cggcgcgttt accggactgc gtatcggcat cggtgtggcg caaggtttgg
    10681 caacgccgtt tgatacccct ttaatcggca tccccacgct cgatgccgcc gcctcgctgc
    10741 cgccgccgca aagctgcata ctcgccgctg cggacgcgcg tatgggcgaa gtgttttatg
    10801 cgtggttcga cacgctgaac cgccgccgtt tgagcgatta tcaggtcggg cgggcggcag
    10861 acatccggct gccggaggga tgtgcctttt cagacggcat aggcagcgcg ttcgcgttgg
    10921 aagaaacgcc gccgttttca ggcaaacccg atatgccgac cgccgccgac ttcctcaatc
    10981 tggcggcgga aggcggtttt cccgccgtcg ctgctgcaca ctccgaactg ctctacgtcc
    11041 gcaacaaaat cgccctaacc gccaaagaac aggcggaacg gaaagcccga acatgaacat
    11101 ccgccgcgcc tcaccgtccg actgcgccgc actcgccgcg ctcgatgccg tctgcaaccc
    11161 gtccgcgtgg acgcaacgcc aatttgagtc cgcattggtt tcgccgtccg aacaggtttt
    11221 cctcgcggaa aaagacggcg ggattgccgc ctttatcgtt tggcagaacc tgcccgacga
    11281 atccgaactg cacctgattg ccaccgcgcc cgaatgccgc cgccgtggcg ttgcgtccgc
    11341 cctgctcgaa tattggttcg cacatctgcc cgaagacacg caacgcctgc tgctcgaagt
    11401 ccgtgcaggc aacaccgccg cacaggcact gtacgcggcg cacggcttta ccgatgcggg
    11461 caggcggaaa aactattacc gtacagccga cggtaaaacc gaagatgctg tcttaatgga
    11521 gaaaatatgt taagcgcgcg ctacctccac ctgcacgaag ctttgggttt aggcccgatg
    11581 tggctgaaac aggccgccgc cgtcctgccg cccaaaaaca cacccgcaac cccggcacag
    11641 gcacgtcctc aaaccgtccg cgccgccccg atccgccctt cccaacccca taacggtcag
    11701 gcgcggctcg aaacgatgaa agcgttggaa accgccgccg tacatacgcg caaacccgcg
    11761 cctgaaaccg aaacgccccc gcccggcctt tcagacggca tcgcccccgt tcccgccgct
    11821 tcgggcataa ccaaacttgc cgtcgtcagc ctttgcccac cgattgagga tgcggtttac
    11881 gggcaactgt tctacggcaa agcgggtgtt ctgcttgaca acatactcaa agccgtagga
    11941 ctggatgccg cctatgtcca caaaacctgt tgggtgaaaa ccgccgccgt cggcaacccg
    12001 atgccgtctg aagcggcaat cgaaaccgcg acggtttccg tcatgcagga actcgacggc
    12061 tgccgcgccc ccgccgtcct attcctcgga caggcttttg tccagcctga acggcaaacg
    12121 atgattgaaa ctttgtgcgg cagccgtccc ttcttcatca tcgaccatcc cgcccggctg
    12181 ttgcgccaac ccgaacttaa agcccgcgcc tggcaggtgt tgaaacagtt gaaacgcgcc
    12241 ttgcggcaag gcggcggcag ttgaagcgca ccgcacgggg cggtagaatc gcaactgcgt
    12301 cccaatatct gacagaaagc acaaaatgac cgatttccgc caagatttcc tcaaattctc
    12361 cctcgcccaa aatgttttga aattcggcga attcaccacc aaagccggac ggcggtcgcc
    12421 ctatttcttc aatgccggcc tctttaacga cggcttgtcc acgctgcaac tggcaaaatt
    12481 ttacgcacaa tccatcattg aaagcggcat ccgattcgat atgctgttcg gccccgccta
    12541 caaaggcatt attttggcgg cggcaaccgc gatgatgctg gcggaaaaag gcgtgaacgt
    12601 cccgtttgcc tacaaccgca aagaagccaa agaccacggc gaaggcggcg tgttggtcgg
    12661 cgcgccgctt aaagggcgcg tgctgattat cgacgacgtg atttccgccg gcacatccgt
    12721 acgcgaatcg atcaaactga ttgaagcgga gggtgcaacc cccgccggtg tcgccatcgc
    12781 gctcgaccgc atggaaaaag gcacgggtga attgagcgcg gttcaggaag tggaaaaaca
    12841 atacggtctg cccgtcgccc ccatcgccag cctgaacgat ttgtttatcc tgttgcaaaa
    12901 caatcccgaa ttcggacagt tcctcgaacc cgtccgagcc taccgtcggc agtacggcgt
    12961 agaataaaaa caaagcatat gccgtctgaa ccgccttacg cctcagacgg catcaaacct
    13021 gacacacacg aggaaatacc atgcccgcct gtttctgccc ccactgcaaa acccgtctct
    13081 gggtcaaaga aacccaactc aatgtcgccc aaggcttcgt cgtctgccaa aaatgcgaag
    13141 gactgtttaa agccaaagac catctggcaa gcacgaaaga acccatattc aacgatttgc
    13201 ccgaggctgt ttcggatgtc aaactcgttc accgtatcgg cacgcgcgcc atcggcaaga
    13261 aacagatttc ccgtgacgaa atcgccggca tcctcaacgg cggcacaacc cagcccgata
    13321 ttccgcccgc aaccgccgcc acccctgctg ccgcaccgca ggttaccgta ccacccgccg
    13381 cgcccgcccg tcaggaaggg ttcaactgga cgattgcaac cctgtttgcc cttatcgtcc
    13441 tcattatgca gctttcctac ctcgtcatcc tatgagcgcg cccgacctct ttgtcgccca
    13501 cttccgcgaa gccgccccct acatccgcca aatgcgcggc aaaacgctgg tcgccggcat
    13561 agacgaccgc ctgctcgaag gcgatacctt aaacaagctc gccgccgaca tcgggctttt
    13621 gtcgcaactg ggcatcaggc tcgtcctcat ccacggcgcg cgccacttcc tcgaccgcca
    13681 cgccgccgcg caaggccgca cgccgcatta ttgccggggc ttgcgcgtta ccgacgaaac
    13741 ctcgctcgaa caggcgcagc agtttgccgg caccgtccgc agccgttttg aagccgcatt
    13801 gtgcggcagc gtttccgggt tcgcgcgcgc gccttccgtc ccgctcgtat cgggcaactt
    13861 cctgaccgcc cgtccgatag gtgtgattga cggaaccgat atggaatacg cgggcgttat
    13921 ccgcaaaacc gacaccgccg ccctccgttt ccaactcgac gcgggcaata tcgtctggct
    13981 gccgccgctc ggacattcct acagcggcaa gaccttccat ctcgatatgc ttcaaaccgc
    14041 cgcctccgtc gccgtctcgc ttcaggccga aaaactcgtt tacctgaccc tttcagacgg
    14101 catttcccgc cccgacggca cgctcgccgt aaccctctcg gcacaggaag cgcaatcgct
    14161 ggcggaacac gccggcggcg aaacgcgacg gctgatttcg tccgccgttg ccgcgctcga
    14221 aggcggcgtg catcgcgtcc aaatcctcaa cggtgcctcc gacggcagcc tgctgcaaga
    14281 actcttcact cgcaacggca tcggcacgtc cattgccaaa gaagccttcg tctccatccg
    14341 gcaggcgcac agcggcgaca tcccgcacat tgccgccctc atccgcccgc tggaagaaca
    14401 aggcatcctg ctgcaccgca gccgcgaata cctcgaaaac cacatttccg aattttccat
    14461 cctcgaacac gacggcaacc tgtacggttg cgccgcccta aaaaccttta ccgaagccga
    14521 ttgcggcgaa atcgcctgcc ttgccgtctc gccgcaggca caggacggcg gctacggcga
    14581 acgcctgctt gcccacatta tcgataaggc gcgcggcata ggcataagca ggctgttcgc
    14641 actgtccaca aataccggcg aatggtttgc cgaacgcggc tttcagacgg catcggaaga
    14701 cgagttgccc gaaacgcggc gcaaagacta ccgcagcaac ggacggaact cgcatattct
    14761 ggtgcgtcgc ctgcaccgct gaccgcaacg gaaagccgcc gcagaaatgc cgtctgaacc
    14821 ccgtttcaga cggcatttcc ccg
//
LOCUS       DAWKJW010000035        13893 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.035, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000035 DAWKJW010000000
VERSION     DAWKJW010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13893)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13893)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13893
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.035"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(69..2045)
                     /locus_tag="WJJ54_000776"
     CDS             complement(69..2045)
                     /locus_tag="WJJ54_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEZ7341667.1"
                     /translation="MNEFSLAPIVVVLLVSVITVILCRKFNIPSMLGYLLVGFLAGPG
                     MLSLIPKSHATDYLGEIGIVFLMFSIGLEFSLPKLRAMRRLVFGLGGLQVGVTMLSVM
                     GILMLTGVPFNWAFAVSGALAMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVV
                     PLMILIPALAGGGDGNIWAALGLAFAKMLLTLGLLFFVGSKIMSRWFRMVAKRKSSEL
                     FMINVLLVTLGVAYLTELEGLSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFF
                     FITVGMKLDIQALIGGWRQVLMLLAMLLVLKALVVFAIAFKMKHSVGDSLKTALYLAQ
                     GGEFGFVMLAIAGQLDMVSPEWEQAATAAVLLSMIIAPFLLGGSDALVGRLVKSSWDM
                     KSLDLHSMLVETMSKSDHVLIVGFGRGGQTVGRVLAQEDIPYFALDLDIARVQVARSA
                     GEPVSFGDAKRREVLEAAGLGRAKMVVLTLNNMHETQHVLDNVLSMYPNMPVYVRATN
                     DDYVKTFTDIGAEEAVSDTKETGLVLAGYAMLGNGASYRHVYQTMANIRHSRYAALEG
                     LFVGSDDEAGFGENGETVRHAFPLAAEAYAVGKTVGTLPMAAYGIKLLFVRRRTGRIE
                     NPDASFTLEGGDVLVVAGKKEEIISFENWSLQGI"
     gene            2194..3033
                     /locus_tag="WJJ54_000777"
     CDS             2194..3033
                     /locus_tag="WJJ54_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HEZ7341668.1"
                     /translation="MTATAAAIDRLLPQTQCRECGYDGCLPYAQAVATGEAYNLCAPG
                     GEAVIRDISALLGKPLVAPAKTQAKALARIDETACIGCTACIRACPADAIMGAGKLMH
                     TVIADECTGCGLCVAPCPVDCIHMQPVADTVLPRARRFSLSADSRFAAAEHARARYLK
                     RNERKQREADERKAMLAEREAAVRNARPQTPDTPKKPAFNPADLIAKAMAKAQTQQDR
                     LAAADNRKDYQAKQIAEARERAELRRAQRDMKYGSDSEKAAALEYLKQYKAKQEAAQN
                     TAS"
     gene            3234..4265
                     /gene="gap"
                     /locus_tag="WJJ54_000778"
     CDS             3234..4265
                     /gene="gap"
                     /locus_tag="WJJ54_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEZ7341669.1"
                     /translation="MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETN
                     AHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGA
                     FTSKEKAKVHLESGAKKVLISAPGGDDVDATVVYGVNDSILTADMTVVSNASCTTNCL
                     SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKA
                     VGLVLPELKDKLDGLAIRVPTVNVSLVDLNFQAARDTTIEEINALMKAASEAGALKGV
                     LGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMIKVFAWYDNEWGFSCQMLNTARRM
                     FGLEVRPLK"
     gene            complement(4417..5142)
                     /locus_tag="WJJ54_000779"
     CDS             complement(4417..5142)
                     /locus_tag="WJJ54_000779"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEZ7341670.1"
                     /translation="MRIPLLAPDNYAFPDPTYALARCDGLVGVSGDLDAGRLLEAYRN
                     GVFPWFSRDGWFFWYAVGPRAVIVPERLHVPRSLAKTLRNGSYRVAVNGCFAEVVAHC
                     AAAARPNQDGTWIAPEFQTAYLKLHEMGHAHSFECHYPDESGETRLAGGFYGVQIGRV
                     FYGESMFALQPDASKIAFACAVPFLADLGVELIDCQQDTEHMRRFGSELLPFADFAER
                     LRMLNAVPLKEEIGRREVACKGL"
     gene            complement(5212..5646)
                     /gene="fur"
                     /locus_tag="WJJ54_000780"
     CDS             complement(5212..5646)
                     /gene="fur"
                     /locus_tag="WJJ54_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HEZ7341671.1"
                     /translation="MEKFNNIAQLKDSGLKVTGPRLKILDLFETHSEEHLSAEDVYRI
                     LLEEGVEIGVATIYRVLTQFEQAGILQRHHFETGKAVYELDKGDHHDHIVCVKCGEVT
                     EFHNPEIEALQDKIAEENGYRIVDHALYMYGVCSDCQAKGKR"
     gene            5865..6242
                     /locus_tag="WJJ54_000781"
     CDS             5865..6242
                     /locus_tag="WJJ54_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEZ7341672.1"
                     /translation="MNKTLILALSALLGLAACSAERASLFPSYKLKVIQGNEIDPRAA
                     AALRLGMTKDQVLLLLGSPLLRDAFHTDRWDYTFNTSRNGIIKERSNLTVYFENGVLV
                     RTEGDALQNAAEALKDRQNTDKP"
     gene            6252..7061
                     /gene="dapB"
                     /locus_tag="WJJ54_000782"
     CDS             6252..7061
                     /gene="dapB"
                     /locus_tag="WJJ54_000782"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEZ7341673.1"
                     /translation="MTPLKIAIAGANGRMGRVLVEAVNNHPDTVLSGALEHSGSEALG
                     LDAGYAVGLKTGIAISDDVDAVLAQSDVLIDFTRPEPTLKHLQKCVEKQVNIIIGTTG
                     FDDAGKAAIHTAAEQTGIVFAANFSVGVNLTFHILDTVARVLNEGYDIEIIEGHHRHK
                     VDAPSGTALRMGEVIAGALGRDLKQCAVYGREGHTGPRDPSTIGFATVRAGDIVGDHT
                     ALFATDGERVEITHKAGSRMTFAAGAVRAAVWVNGKTGLYDMQDVLGLNNR"
     gene            complement(7058..7303)
                     /locus_tag="WJJ54_000783"
     CDS             complement(7058..7303)
                     /locus_tag="WJJ54_000783"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341674.1"
                     /translation="MPRRQLYRISFSVETPPLGHLSFGAVESDFIWEGRNPLQIRTTH
                     RATLYVSSRVLKHMPIRSLSAKCRLNNIFSDGILYGG"
     gene            complement(7321..7731)
                     /locus_tag="WJJ54_000784"
     CDS             complement(7321..7731)
                     /locus_tag="WJJ54_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341675.1"
                     /translation="MTTYTIPKKDYQFLYIYEGTLLNYTLKNDEFHIIVNCVDYPDLP
                     QEIPMPNYSDWVKIKFKQFSYLKFVYGYATKNRDKDIDNTLELGELKQDDEILDYGGA
                     LEVIGGRYDFPTAFRIDIVCREIELEFLDQEGFN"
     gene            complement(7733..7978)
                     /locus_tag="WJJ54_000785"
     CDS             complement(7733..7978)
                     /locus_tag="WJJ54_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341676.1"
                     /translation="MDYFPEAARITKKGGEIVINGTSNNKYLRGIPNEAELARVGLRL
                     KYNGLLKEEFKQLKFHKSSRTNLDSKNLKLIVFEKVK"
     gene            complement(7986..9158)
                     /gene="lpxB"
                     /locus_tag="WJJ54_000786"
     CDS             complement(7986..9158)
                     /gene="lpxB"
                     /locus_tag="WJJ54_000786"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEZ7341677.1"
                     /translation="MWGQTNMVDKKSPLIAVSVGEASGDLLGAHLIRAIRKRCPQARF
                     VGIGGELMKAEGFESLYDQERLAVRGFVEVVRRLPEILRIRRGLVRDLLSLKPDVFVG
                     IDAPDFNLGVAEKLKRSGIPTVHYVSPSVWAWRRERVGKIVHQVNRVLCLFPMEPQLY
                     LDAGGRAEFVGHPMAQLMPLEDDRETARQTLGVDAGIPVFALLPGSRVSEIDYMAPVF
                     FQTALLLLERYPAACFLLPAATEATKRRLAEVLQRPEFAGLPLTVIDRQSETVCRAAD
                     AVLVTSGTATLEVALCKRPMVISYKISPLTYAYVKRKIKVPHVGLPNILLGKEAVPEL
                     LQSEAKPEKLAAALADWYEHPDKVAALQQDFRALHLLLKKDTADLAARAVLEEAGC"
     gene            complement(9206..10198)
                     /locus_tag="WJJ54_000787"
     CDS             complement(9206..10198)
                     /locus_tag="WJJ54_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEZ7341678.1"
                     /translation="MKTHEISKDSVSLIGVAEHEAGQRLDNYLIKILKGVPKSHIHRI
                     IRAGEVRLNKKRCKPDSRIAEGDTVRIPPVRVAEKEMPSERRAAVPARAFDVVYEDDA
                     LLVIDKPSGVAVHGGSGVSFGVIEQLRRARPEAKYLELVHRLDKDTSGLLMVAKKRSA
                     LVKLHEAIRNDHPKKIYLALGVGKLPDDNFHVKLPLFKYTGAQGEKMVRVSEDGQSAH
                     TVFRVLSRFSDGILHGVGLSHLTLVRATLKTGRTHQIRVHLQSQGCPIAGDERYGDYQ
                     ANRRLQKLGLKRMFLHASELHLNHPLTGEPLVLKAELPPDLAQFAVMLENGTKM"
     gene            10692..13451
                     /locus_tag="WJJ54_000788"
     CDS             10692..13451
                     /locus_tag="WJJ54_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEZ7341679.1"
                     /translation="MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKG
                     IITRIEPSLEACFVDYGTDRHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQV
                     EKDERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPN
                     GMSIIARTAGIGRSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRD
                     YFRPDIGEILVDNQEVYDQVAEFMSYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAF
                     SRSVSLPSGGAIVIDHTEALVSIDVNSARATRGSDIEDTAFKTNMEAAEEVARQMRLR
                     DLGGLVVIDFIDMENPKHQRDVENVLRDALKKDRARVQMGKLSRFGLLELSRQRLKPA
                     LGESSHVACPRCAGTGVIRGIESTALHVLRIIQEEAMKDNTGEVRAQVPVDVATFLLN
                     EKRAELFAMEERLDVNVVLIPNIHLENPHYEINRIRTDDVEEDGEPSYKRVAEPEEDE
                     SAKPFGGEKAKAARPEPAVKGVRHTSPAPTAAPEKKTSWWDSFKAWLKRIFGGSETQA
                     APAAETSEKRSTANRSGSRANNRRQNPRRSKREGSKVEVREVAGKTAGQEARADKAET
                     RNNGNRRRNERGDRAAGRADEAEIQDRNIQPAATVADAAPSETEVQTGKRRRNGSRSE
                     RGQTAPETATVAETTVQTAENTPSEPHTAEDKGSKPKSERNRRERDSRDAKERRERNN
                     QRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVFGETDANAPITVSIADPVA
                     ERDLPTASPAVSNGDAPVYDAAEKIRRATAAILPEGATPKAEAQEMPSENATFTAAAE
                     QARETAQTGGLVLIETDPAALKAWAAQPEVQAGRGLRRSEQPKPSEAATVPAEEMIQV
                     ETRQG"
BASE COUNT         3501 a         4509 c         3240 g         2643 t
ORIGIN      
        1 tgaattttgc gaaagcgtta ttaaaccaaa taaccggaaa tggcgcaagc cttatttcgg
       61 catttcattt atattccctg caaactccag ttttcaaaag agataatttc ttcttttttg
      121 cctgcgacca ccaacacgtc accgccttcc aatgtaaacg aggcatccgg gttttcaatc
      181 cggcctgtgc ggcggcggac gaacaagagt ttgatgccgt aagccgccat cggaagcgtg
      241 ccgactgttt tgccgacggc gtatgcttct gcagccaaag gaaaggcgtg gcggacggtt
      301 tcgccatttt cgccgaatcc tgcctcatca tcactaccga caaacaaacc ctccaacgcg
      361 gcataacggc tgtggcggat atttgccatc gtctgataga cgtgccggta cgacgcgccg
      421 ttgcctaaca tcgcatagcc tgccagcacg agtccggttt ctttggtgtc cgacacggct
      481 tcttccgcac ctatatcggt aaacgttttc acataatcgt cgttggtggc gcgcacatat
      541 acgggcatat tgggatacat ggacagcaca ttgtctaaaa cgtgttgcgt ttcgtgcata
      601 ttgttgagcg tcagcaccac cattttcgcc cgccccaaac cggcggcttc caatacttcc
      661 ctgcgtttcg catcgccgaa cgacaccggt tcgcccgcac ttctggcaac ctgcacccgc
      721 gcaatgtcca agtcgagcgc gaaatacgga atatcctctt gggcaaggac gcgtccgacc
      781 gtctgcccgc ccctgccgaa gccgacaatc agcacatggt cggacttgct catggtttct
      841 accagcatac tgtgcagatc gagcgacttc atgtcccagc ttgacttgac caaacgcccg
      901 accagcgcat cgctgccgcc caagaggaag ggcgcgataa tcatcgacag cagcaccgcc
      961 gccgtcgccg cctgttccca ttctggcgaa accatatcaa gctgcccggc aatggccagc
     1021 atcacgaagc cgaactcgcc gccttgtgcg agatacaaag ccgttttgag gctgtcgccg
     1081 accgaatgtt tcattttgaa ggcaatggca aacacaacca gtgccttcaa caccagcagc
     1141 attgccaaca gcatcaatac ctgccgccag ccgccgatca atgcctgaat gtccagcttc
     1201 atgccgaccg tgataaagaa aaagccgagc aaaatatcgc ggaacgggcg gatgtcgtct
     1261 tcgacttgga aacggtattc cgtttccgaa agcagcatcc ccgccacaaa cgcgcccaac
     1321 gccatagaca aaccttccag ctcagtcaga taagccacac ccaaggttac cagcagcaca
     1381 ttgatcataa agagttcgga cgatttgcgt tttgccacca tcctgaacca tcgcgacata
     1441 attttgctgc cgacgaaaaa cagcagcccc agcgtcagca gcatttttgc aaacgccaaa
     1501 cccaaggccg cccaaatatt tccgtcccct ccgcccgcca gcgcgggaat cagaatcatc
     1561 agcggcacga cggcgatgtc ctgcatcagc agcacgccca tcgccatctg accgtgcggc
     1621 tgccccaatt ccgtcttttc cgacaaaatc cggctcacaa tcgccgtgga cgacatcgcc
     1681 aacgcgcccg acacggcaaa cgcccaattg aacggcacgc ccgtcagcat cagtatgccc
     1741 attaccgaca gcatcgtaac gccgacctgc aaaccgccca gcccgaatac cagccgcctc
     1801 atcgccctca acttgggcag cgagaactcc aaaccaatgc tgaacatcag gaacacaatc
     1861 ccgatttcac ccaaataatc cgtcgcatgg cttttcggaa tcaggctgag cataccgggc
     1921 cccgccaaaa agcccaccag caggtagccc agcatggagg gaatgttgaa cttgcggcac
     1981 aggatcaccg taatgaccga caccagcaaa acaaccacaa taggggcaag cgaaaattcg
     2041 ttcatagacc gtccgaacag gaaaatacag aaaaatgccg tctgaaacgg catacgccgc
     2101 cgtattataa caaaacaccg cgcaccatcc gaaacgggcg cggcatacaa ttctgctaaa
     2161 atacgccctt tcgattttga gccgcacacc gacatgaccg ccacagccgc cgccatagac
     2221 cgcctgcttc cccaaaccca atgccgcgaa tgcggctacg acggctgcct gccctacgca
     2281 caggcagtcg caacaggcga agcgtacaac ctctgcgccc cgggcggaga agccgtcatt
     2341 cgggacattt ccgccctgct cggcaaaccc cttgtcgcac ctgccaaaac ccaagccaaa
     2401 gcactcgccc ggatagacga aaccgcctgt atcggctgca ccgcctgcat ccgcgcctgc
     2461 cctgccgatg ccattatggg tgcgggcaaa cttatgcaca ccgtcatcgc cgacgaatgc
     2521 accggctgcg gactctgcgt cgccccctgc cccgtcgact gcatccatat gcagcccgtt
     2581 gccgacaccg tcctgccccg cgcgcgccgc ttcagcctgt ccgccgacag ccgttttgcc
     2641 gccgccgaac acgcgcgtgc gcgctacctc aaacgcaacg aacgcaaaca gcgcgaagcc
     2701 gacgaacgca aggccatgct tgccgaacgc gaagccgccg tccgcaacgc gcgtccgcaa
     2761 acacccgaca caccgaaaaa accggcgttt aaccctgccg acctcatcgc caaagccatg
     2821 gcaaaagcgc aaacccaaca agaccgcctc gccgccgccg acaaccgcaa agactatcag
     2881 gcgaaacaga tagccgaagc ccgcgaacgc gccgagttgc gccgcgccca acgcgatatg
     2941 aaatacggca gcgacagcga aaaagccgcc gccctcgaat atctcaaaca atacaaagcc
     3001 aaacaggaag ccgcacagaa taccgcctcc tgacccttcc ctgatatgcc gtctgaaaac
     3061 cgtttcagac ggcattttat caagctctcc gtccgccgca cccgtgccgt ccgcatctta
     3121 ccgcccaccc ttccggccgc gccgttttca ataaaatatt aattacacgc cactacaaat
     3181 ttgctataat ccgccccgaa aatctaccca acccctcaac aaaggaacaa accatgggca
     3241 tcaaagtcgc catcaacggc tacggacgca tcggccgcca ggttttgcgc gccatctacg
     3301 attatcagat tcaagaccaa ctccaaatcg tcgccgtcaa cgccagcggc agccttgaaa
     3361 ccaacgccca cctcaccaaa ttcgacaccg tgcacggacg ctttgaagcc gacgtatccc
     3421 acgacggcgg caacctcatc gtcaacggcg acaaaatccc cttcttctcg acccgcaacc
     3481 ctgccgaact gccgtggaaa gaactcggtg tcgatttggt catggaatgc accggcgcgt
     3541 tcaccagcaa agaaaaagcc aaagttcatc tggaaagcgg cgcgaaaaaa gtcctcattt
     3601 ccgcaccggg cggcgacgat gtcgatgcaa ccgtcgtgta cggcgtgaac gacagcatcc
     3661 tgaccgccga catgaccgtc gtttccaacg cttcctgcac caccaactgc ctctcgccgg
     3721 ttgccaaagt gttgagcgaa agcgtcggca tcgtcaaagg cgcgatgacc accatccacg
     3781 cgctgaccaa cgaccaaacc gttaccgacg tgcgccacaa agacctgcgc cgcgcccgca
     3841 gcggcgtgga aaacatgatt ccgaccaaaa ctggcgcggc aaaagccgtc ggactggtac
     3901 tgcccgaatt gaaagacaaa ctcgacgggc ttgccatccg cgtgccgacc gtcaacgtat
     3961 cattggtaga tttgaacttc caagccgcgc gcgacacgac aatcgaagaa atcaacgcac
     4021 tgatgaaagc cgcctcggaa gcaggcgcgc tcaaaggcgt tttaggctac aacaccctgc
     4081 ccttggtttc catggacttc aaccacacca ccgaagccag ccacttcgac gcaacactga
     4141 ccaaagtcgt tgacggcaac atgattaaag tcttcgcatg gtatgacaac gaatggggct
     4201 tcagctgcca aatgctgaac accgcacgcc gtatgttcgg acttgaagtg cgcccgctca
     4261 aataagcaat aaaccgtcaa acaaaatgcc gtctgaaacc cgatgttttc aagttccaga
     4321 cggcattttt cattttttgg cagtgatttt gcccggctgt cgccatttcc aattttaatc
     4381 caccatattt gaacctgacc ggagcataag ccgccatcaa agccccttgc acgccacttc
     4441 gcgccgcccg atttcctctt tcaacggcac ggcgttcaac atccgcagac gttcggcaaa
     4501 atccgcaaac ggcagcagct ccgaaccgaa acggcgcata tgttccgtgt cctgctggca
     4561 gtctatcagt tccacaccca aatccgccaa aaacggcacg gcgcaggcaa acgcgatttt
     4621 cgacgcatcc ggttgtaatg cgaacatcga ttcgccgtaa aacaccctgc cgatttgcac
     4681 gccgtaaaag ccgcccgcca acctcgtttc accgctttca tcgggataat ggcactcgaa
     4741 cgaatgcgcg tgtcccattt cgtgcagctt caaatatgcc gtctgaaact cgggcgcaat
     4801 ccaagttccg tcctgattcg ggcgcgccgc tgccgcacaa tgcgcgacca cttccgcaaa
     4861 acagccgttg accgcaaccc gatagctgcc gttgcgcagc gttttcgcca gcgagcgcgg
     4921 aacgtgcaga cgttcgggaa caatcaccgc acgcgggccg accgcatacc aaaaaaacca
     4981 accgtcccga gaaaaccacg gaaacacgcc gttccgatac gcctcgagca gccgccccgc
     5041 atccaaatcg ccgctcacgc cgaccagccc gtcgcaccgg gccaaagcat aggtaggatc
     5101 gggaaaggca taattgtcag gggcaagcag cggaatacgc atggcagttc tccaaaaaca
     5161 cagacggcat ccaaaatcat gaatgccgtc tgaacaacaa accgtccgga tttaacgttt
     5221 gcccttggcc tgacagtcgc tgcacacgcc gtacatataa agcgcgtgat cgacgatgcg
     5281 gtagccgttt tcctcagcga ttttgtcttg cagggcttcg atttcgggat tgtggaattc
     5341 cgttacctcg ccgcacttca cgcagacgat gtggtcatgg tggtcgcctt tgtccaactc
     5401 ataaaccgcc ttgcccgttt caaaatgatg gcgttgcaga atacccgcct gctcaaactg
     5461 ggtcagcaca cggtaaatcg tcgccacacc gatttccaca ccctcttcca acaaaatgcg
     5521 gtacacatct tccgcactca aatgctcttc cgaatgcgtc tcgaacaaat ccaaaatctt
     5581 caaacgcggg ccggtaacct tcagaccgct gtctttcagt tgtgcaatat tgttgaattt
     5641 ttccataata ttcaataccc ctgtaaaaca atagacgtta taatacgcaa tttcggcctg
     5701 tttgcccact atcgcaccat agcagtttgc aatagtaaaa ccgcaccggc ggccgatgcg
     5761 cggacagggc ggataccgct taatcgtatg attatcgttc gcttttataa aatattcaag
     5821 cagtgttaca ctacccatcc cgatttgcac agaaaggcat ttccgtgaac aaaaccctca
     5881 tcctcgccct ttccgccctc cttggccttg ccgcgtgcag tgccgaacgc gcctcgctgt
     5941 tcccctcata caagctcaaa gtcatacagg gcaacgaaat cgacccccgc gccgccgccg
     6001 cactccgcct cggtatgacc aaagaccaag tcctgctcct gctcggcagc cccctgttgc
     6061 gcgacgcgtt ccacaccgac cgctgggact ataccttcaa cacctcccgc aacggcatca
     6121 tcaaagaacg cagcaatctg accgtctatt ttgaaaacgg cgtactcgtc cgcaccgaag
     6181 gcgacgccct gcaaaacgct gccgaagccc tcaaagaccg ccaaaacaca gacaaaccat
     6241 aaggaacaca catgacaccg ctcaaaatcg ccatcgccgg cgcaaacggc cgtatgggac
     6301 gcgtattggt tgaagccgtc aacaaccatc ccgacaccgt cctttccggc gcgctcgaac
     6361 actcaggctc agaagccctc ggactggacg caggctacgc cgtcggactc aaaaccggca
     6421 tcgccatttc agacgacgtt gacgccgttc tcgcacaaag cgacgtactc atcgacttca
     6481 cccgccccga gcccaccctc aaacacctgc aaaaatgcgt tgaaaaacaa gtcaacatca
     6541 tcatcggcac aacaggcttc gacgatgcgg gcaaagccgc tatccacact gccgccgaac
     6601 aaacaggcat cgttttcgcc gccaacttca gcgtcggcgt caacctcacc ttccacatcc
     6661 tcgacaccgt cgcacgcgta ttaaacgaag gctacgacat cgaaatcatt gaaggccacc
     6721 accgccacaa agtcgatgcc cccagcggca ccgcgttacg catgggcgaa gtcatcgccg
     6781 gcgcgctcgg cagagacctc aaacaatgcg ccgtttacgg ccgcgaaggc cacaccggtc
     6841 cgcgcgatcc gtcgaccatc ggctttgcca ccgtccgcgc aggcgacatc gtcggcgacc
     6901 acaccgccct cttcgccacc gacggcgagc gcgtggaaat cacccacaaa gccggcagcc
     6961 gcatgacctt tgccgccggc gccgtccgcg ccgcagtttg ggtaaacggc aaaacgggtt
     7021 tgtacgatat gcaggacgta ctcgggctga acaaccgtta acccccatac aaaatgccgt
     7081 ctgaaaagat attgttcaga cggcattttg ccgacaggct ccgtatcggc atatgtttca
     7141 acacacggga cgatacataa agcgtcgccc tatgtgtcgt cctgatttgc aagggattac
     7201 gcccctccca aataaagtct gattctaccg ccccgaagga cagatgtccg agtggcgggg
     7261 tttcaaccga aaaggaaata cgataaagtt gcctgcgcgg cataacaagc tacggctcgt
     7321 ttaattgaaa ccctcctgat ctaaaaattc taactctatt tcccggcaaa ctatatctat
     7381 cctaaaagca gtcggaaaat catacctacc gcctatcact tccagcgcac ctccataatc
     7441 caagatttca tcatcctgct ttaattcgcc aagttccaat gtattatcga tatctttatc
     7501 tcggtttttt gtggcgtatc catagacaaa tttcaaatag ctgaactgct tgaatttaat
     7561 ttttacccag tctgaataat taggcatagg gatttcttga ggtaaatccg gataatccac
     7621 acaattgacg atgatatgga attcatcgtt tttcaaagta tagtttaata gagtgccctc
     7681 atatatatac agaaattgat aatctttttt tggaatggta taagttgtca tattatttta
     7741 ccttttcaaa aacaatgagt ttaagatttt ttgagtccaa gttggttcta ctactcttat
     7801 gaaatttcag ttgtttaaac tcttccttta acagaccatt atattttaac cttaatccca
     7861 ctcgagccag ttctgcttca tttggaattc ctcttaaata cttattgttt gatgtgccat
     7921 taatcacaat ttctccccct ttttttgtaa tacgtgctgc ttcgggaaaa taatccatta
     7981 accgctcaac atcccgcctc ttccaaaacc gcgcgcgcgg ccaaatccgc cgtatctttt
     8041 ttcaacagca ggtgcaacgc cctgaaatcc tgttgcagcg cggcaacctt atcggggtgt
     8101 tcgtaccagt ccgccaacgc cgccgccagt ttttccggtt ttgcttcaga ttgcaataat
     8161 tccggcacag cctccttacc caacaggata ttcggcaggc cgacatgcgg cactttgatt
     8221 ttgcgtttca cataagcata agtcagcggc gaaatcttgt agctgatgac catcggacgc
     8281 ttgcacaacg ccacctccaa agtcgccgta ccgctcgtta ccagcaccgc atccgccgcc
     8341 ctgcacactg tttcagactg tctgtcgatt accgtcagcg gcaatccggc aaactccggc
     8401 cgctgcaaaa cttccgccaa acgccgcttc gtcgcctccg ttgcggcagg cagcaggaag
     8461 catgcggcag gatagcgttc caacaacaat aatgccgtct gaaaaaacac cggcgccata
     8521 tagtcgattt cgctgacgcg gctgccgggc agcagggcga atacggggat gccggcatcc
     8581 acgcccaaag tttgccgcgc cgtttcacgg tcgtcttcca agggcataag ctgcgccatc
     8641 ggatgaccga caaactccgc acgtccgccc gcatcgagat aaagctgcgg ctccatcggg
     8701 aacaggcaca acacgcggtt gacctgatgc acgattttgc ccacacgttc ccgccgccac
     8761 gcccacaccg acgggctgac ataatgcacg gtcggaatcc ccgaccgttt cagcttttcc
     8821 gccacaccca aattaaaatc gggcgcatcg ataccgacaa agacatcagg tttcaacgac
     8881 agcaaatccc gtaccagccc cctgcgtatc cgtaaaattt ccggcagccg cctgaccact
     8941 tcgacaaagc cgcgcaccgc cagccgctcc tgatcataaa ggctctcgaa accttccgcc
     9001 ttcatcagtt cgccgccgat accgacaaaa cgcgcctgcg gacaacgctt gcggatggcg
     9061 cgtatcaggt gcgcccccaa caggtcgccc gacgcttcgc cgacactgac ggcaatcaaa
     9121 gggctttttt tatcaaccat attcgtctgt ccccacatac tttcacgtcc cgatgccgtc
     9181 tgaaggcttc agacggcatc ggggttcaca ttttcgtccc gttttccaac atcaccgcaa
     9241 actgtgccaa gtccggcggc agctccgcct tcaacaccag cggctcgccc gtgagcggat
     9301 ggttcaagtg cagctcggac gcgtgcaaaa acatccgctt caaacccaac ttctgcaaac
     9361 gacggttcgc ctgataatcg ccgtagcgtt cgtcgcccgc aatcggacag ccttgagatt
     9421 gcaggtggac gcggatttgg tgcgtacgac ccgttttcag cgttgcccgc accaaagtca
     9481 ggtgcgacag cccgacaccg tgcaaaatgc cgtctgaaaa acggcttaac acacggaaca
     9541 ccgtgtgcgc cgactgcccg tcctcgctga cgcgtaccat cttttcgcct tgtgcgccgg
     9601 tatatttgaa caggggcagt ttgacatgga aattgtcgtc cggcagtttg cccaccccca
     9661 gcgcaaggta gatttttttg gggtggtcgt tacggatggc ttcgtgaagt ttgacgagcg
     9721 cgctgcgttt cttcgccacc atcaacaagc cgctcgtatc cttgtccaaa cgatgaacca
     9781 actccaaata cttcgcctcc ggacgggcgc ggcgcaactg ttcgataacg ccgaaactca
     9841 cgccgctgcc gccgtggacg gcaacgccgg acggtttgtc gatgaccaaa agcgcatcgt
     9901 cttcgtaaac aacgtcaaac gcacgcgccg gtacggcggc acgcctttca gacggcattt
     9961 ccttctccgc cacgcgcaca ggcggaatcc gcaccgtatc cccctccgca atacggctgt
    10021 cgggtttgca gcgtttcttg ttcaaccgca cctcgccggc gcggataatg cggtggatat
    10081 ggctcttggg aacacccttg aggattttta tcagatagtt atcaaggcgt tgacccgcct
    10141 catgttcggc aacccctatc aagctgaccg aatctttgct tatttcgtgc gttttcatct
    10201 ataatccgaa catccgtttc agcaaaaagc gcgcccgccg cgcccccctg aaacggttta
    10261 ctttaaaacg gaattttata ttaaaaacgc actccgcaaa gcattttccc tgcgcctgtt
    10321 cccagccggc aggcgcagaa cgtaatcaag tttgaattga ttttgccgtt tcggcgcgga
    10381 agtaagacgg cagccgggcc ccaagtccca aacgcaaacc gcccaaaaca caggcatcac
    10441 gataacaaga agaagccggc ccccattttt ccgaccgcag cgttcggaac gcggcagaca
    10501 aaccgccgca tcgatcttta tagccttctg tatccgaccc ttccgcacac ggttctccgg
    10561 aacgtgcatc cctgcggatt ttcaactcaa aaactgatta ccggttttat ccgaaaacat
    10621 cggaaaaccc agccttacgg aatgccgaac cggaccggcg cgcccgaatg ccgcccgtcc
    10681 acgaggtgat catgaaaaga atgttattca acgcaacgca ggccgaagag ctgcgcgttg
    10741 ccatcgtcga cggacaaaac ctgctggatt tggacatcga aacgctgggc aaagaacagc
    10801 gcaaaggcaa tatctacaaa ggcatcatta cccgcatcga gccgtcgctg gaagcgtgtt
    10861 tcgtggatta cggaaccgac cgccacggct tcttgccgtt taaagaagtc tcccgctcat
    10921 acttccaaga ctacgaaggc ggacgcgcgc gcatccaaga cgtgctcaaa gaaggcatgg
    10981 aagtcatcgt ccaagtcgaa aaagacgagc gcggcaacaa aggcgcggcg ctgaccacct
    11041 tcatcagcct cgccggacgc tatctggtat tgatgccgaa caacccgcgc ggcggcggcg
    11101 tatcccgccg tatcgaaggt gaagagcgtc aagagttgaa agccgccatg gcggaactcg
    11161 acattccgaa cggcatgagc atcatcgccc gtaccgccgg catcggccgc agcgcggaag
    11221 agttggaatg ggatttgaac tatctcaaac aactctggca ggcgattgaa gaagcaggaa
    11281 aagcgcatca cgacccttac ctgctcttta tggaaagctc gctgctcatc cgcgccatcc
    11341 gcgactattt ccgccccgac atcggcgaaa ttctggtgga caatcaagaa gtttacgacc
    11401 aagttgccga gttcatgagc tacgtcatgc cgggcaatat aggccgtctg aaactctacg
    11461 aagaccacac gccgctgttt tcccgcttcc aaatcgaaca ccaaatcgaa agcgcgtttt
    11521 cgcgcagcgt cagcctgccc tccggcggcg cgatcgtcat cgaccatacc gaagccctcg
    11581 tctccatcga cgttaactct gcacgtgcca cacgcggatc tgacattgaa gacactgcgt
    11641 tcaaaaccaa tatggaggcc gccgaagaag tcgcccgaca aatgcgcctg cgcgacttgg
    11701 gcggcttggt cgtcatcgac ttcatcgaca tggaaaaccc caaacaccag cgcgatgtgg
    11761 aaaacgtcct gcgcgacgcg ctcaaaaaag accgcgcccg cgtacagatg ggcaaactct
    11821 cccgtttcgg acttttagaa ttgagccgcc aacgtttgaa accggctttg ggcgaaagca
    11881 gccacgtcgc ctgtccgcgc tgcgccggca ccggcgtgat tcggggcatc gaatccaccg
    11941 ccctgcacgt tttacgcatc attcaagaag aagcgatgaa ggacaacacc ggagaagtgc
    12001 gcgcccaagt gcccgtcgat gtcgccacct tcctgctgaa cgaaaaacgc gccgagctgt
    12061 ttgcgatgga agagcgtttg gatgtcaacg tcgtcctgat tccgaacatc cacctcgaaa
    12121 atccgcacta cgaaatcaac cgcatccgca ccgacgacgt agaagaagac ggcgaaccga
    12181 gctacaaacg cgtcgccgag cctgaagaag acgaatccgc caaaccgttc ggcggcgaaa
    12241 aagccaaagc cgcccgtccc gaacccgccg tcaaaggcgt gcgccacacc agccccgccc
    12301 cgactgccgc ccccgagaaa aaaacctctt ggtgggacag cttcaaagct tggctcaaac
    12361 gcattttcgg cggcagcgaa acccaagccg cgcccgctgc cgaaacctcc gaaaaacgca
    12421 gcacggcaaa ccgcagcggc agccgcgcca acaaccgccg ccaaaacccg cgccgcagca
    12481 aacgcgaagg cagcaaagta gaagtccgcg aagtggcagg caaaactgcc ggacaggaag
    12541 cgcgtgccga caaagccgaa acgcgcaaca acggcaaccg ccgccgcaac gaacgcggcg
    12601 accgtgccgc cggacgcgcc gacgaagcgg aaatccaaga ccgcaacata cagcctgccg
    12661 caaccgttgc agatgccgca ccgtccgaaa ccgaagtgca aaccggaaaa cgccgccgca
    12721 acggcagccg cagcgaacgc ggccaaaccg cgccggaaac cgccaccgtt gccgaaacaa
    12781 ccgttcagac agcggaaaac acgccgtccg aaccgcatac cgcagaagac aaaggcagca
    12841 agcccaaatc cgaacgcaac cgccgcgaac gcgacagccg agatgccaaa gaacgccgcg
    12901 agcgcaacaa tcagcgcgac cgccgtcaaa acggcaaaaa acgcaatatt ccgtctgccg
    12961 ccaaaatcga gcagtacctg aatattcacg acaccgccga caaagtccgt tccgccgccg
    13021 cgcacgtttt cggcgaaacc gacgcaaacg cgccgattac cgtcagcatt gccgatccgg
    13081 ttgcagaaag ggatcttccg acagcatctc ccgccgtttc aaacggcgac gcaccggttt
    13141 atgatgcggc ggaaaaaatc cgccgtgcca ccgccgccat cctgcccgaa ggcgcgacac
    13201 cgaaagccga agcacaggaa atgccgtctg aaaacgcaac ctttacggct gcggcggaac
    13261 aggcacggga aaccgcacaa accggcggac tcgtcctgat cgaaaccgac cctgccgcat
    13321 tgaaggcatg ggcggcacaa cccgaagtcc aagccggacg cggtttgcgc cgttccgaac
    13381 agcccaagcc gtctgaagcc gcaaccgtcc ctgccgaaga aatgatccaa gtcgaaaccc
    13441 ggcaaggctg aaccgacggc ggcaaaaaga ggttctgttc cgcagaacct cttttttaca
    13501 tgggttcgga tacctgcaat gccgtctgaa acttcgccat tcccgtgatt accgaaacat
    13561 tccgccattc ccatgattcc cgcaacattc cgtcattccc atgattcccg caacattccg
    13621 tcattcccat gaaaacggga atctagaacc tcaaactttc ggataatctt tgaatattgc
    13681 cgtcgcccaa aggcctggat tcccgcctgc gcgggaatga cggcggaggg tggacgatgc
    13741 cgtctgaaac ttcgccattc ccatgattac cgcaaccttt cgtcattccc gccacctttc
    13801 gtcattcccg tgaaaacggg aatctagaac ctcaaacttt cggataatct ttgaatattg
    13861 ccgccgccca aaggtctgga ttcccacaac att
//
LOCUS       DAWKJW010000036        13574 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.036, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000036 DAWKJW010000000
VERSION     DAWKJW010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13574
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.036"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(247..582)
                     /locus_tag="WJJ54_000789"
     CDS             complement(247..582)
                     /locus_tag="WJJ54_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEZ7341680.1"
                     /translation="MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKI
                     TMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARDKAEETANKTMGAFTQGL
                     PPGVGDFFR"
     gene            complement(663..2792)
                     /gene="dnaX"
                     /locus_tag="WJJ54_000790"
     CDS             complement(663..2792)
                     /gene="dnaX"
                     /locus_tag="WJJ54_000790"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEZ7341681.1"
                     /translation="MAYQVLARKWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLT
                     GTRGVGKTTIARILAKSLNCENAQHGEPCGVCESCTQIDAGRYVDLLEIDAASNTGID
                     NIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPH
                     KVPVTVLSRCLQFVLRNMTSQQVADHLAHVLDSEKIAYEPVALQLLGRAAAGSMRDAL
                     SLLDQAIALGSGKVAENDVRQMIGAVDKQYLYELLTGIINQDGAALLSKAQEMAACAV
                     GFDNALGELAILLQHLALIQAVPSALAHYDPDSDILHRLAQTISGEQIQLYYQIAVHG
                     KRDLSLAPDEYAGFMMTLLRMLAFAPLAAASCDANAVIENTELKSPSAQTAEKETAAK
                     KPQPRPEAETAQTSVQTASAAAMPSEGKAAEPVSNQENNDVPPWEDAPDEAQAAAGTA
                     QTSAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPNDEAVETEAF
                     AHEAPAEPFYGYGFPDNDCPVEDGAEIPPPDWEHAAPADTAGGGADEEAEAGGIGGNN
                     TPSAPPPEFSTENWVAIVRHFARKLGAAQMPAQHSAWTEYHPDTGLMVLAMTAEARAT
                     ADKKRLDKIRDTLAQAYGLQLTLQTQDWQDEAGRETPAMQDKRVQIEDRQKAQALLEA
                     DPAAQKILQAFGAQWQPESLELAANRP"
     misc_feature    complement(1564..1603)
                     /gene="dnaX"
                     /locus_tag="WJJ54_000790"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01843"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="This ribosomal frameshift element is known only in
                     the genus Neisseria; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01843"
     gene            complement(2887..4863)
                     /gene="mutL"
                     /locus_tag="WJJ54_000791"
     CDS             complement(2887..4863)
                     /gene="mutL"
                     /locus_tag="WJJ54_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEZ7341682.1"
                     /translation="MPRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAID
                     VELAGGGIRLIRVSDNGSGIHPDDIKLALHRHATSKIKTLNDLEHVASMGFRGEGLAS
                     IASVSRLTLTSRQDGSAHATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKF
                     LKSEATEYAHCATMLERLALAHPHIAFSLKRDGKQVFKLPAQSLHERIAAIVGDDFQT
                     ASLEIDSGNGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH
                     NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTE
                     SVGNAGEVLHDITGVTPAPMPSENNSENLFDRASNYPTGNKPDTRNAFGASGKTAPMP
                     YQAARAPQQRSLSLRESRAAMNTYAELYKKTDDIDLELNRLEQARFGNMPSETPTPKT
                     DAPLSDGIPSQSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQR
                     QENGNLQSQRLLIPVTFAASHEECAALADYAETLAGFGLELSDMGGNTLAVRAVPAML
                     GKADVVSLAKDVLNELAQVGSSQTIEEHENRILATMSCHGSIRAGRRLTLPEMNALLR
                     DMENTPRSNQCNHGRPTWVKLTLKELDALFLRGQ"
     gene            5006..5191
                     /locus_tag="WJJ54_000792"
     CDS             5006..5191
                     /locus_tag="WJJ54_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HEZ7341683.1"
                     /translation="MYHYQSEATQFLNRLIEEKPELEQQRLENRGLLWDVELNPEEQE
                     NFEAAKVAKKPYTYYQD"
     gene            5202..5870
                     /locus_tag="WJJ54_000793"
     CDS             5202..5870
                     /locus_tag="WJJ54_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HEZ7341684.1"
                     /translation="MTTHLSNVAPDLQNYLNAIGEPEHPVLTRLREKTGHHRMGKMAI
                     AREQAAVLVWLAKLIRAEKYLEVGVFTGYSSTALALALPKHGRITACDINVTFTDTAR
                     QVWNEAGVAHKISLHLQPALLTLDDLIAQGEAGSYDLALIDADKPPTPQYFERCLKLV
                     RQGGIIAIDNILLNGRVMREAASDAPPSVGILKDFNQNLPNDTRIVPITLPVGDGLTL
                     LLKK"
     gene            5870..6586
                     /locus_tag="WJJ54_000794"
     CDS             5870..6586
                     /locus_tag="WJJ54_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system YbgF family protein"
                     /protein_id="HEZ7341685.1"
                     /translation="MKTKLPLFIIWLSVSAACSSPVSRNIQDMRLEPQAEAGSSDAIP
                     YPVPTLQDRLDYLEGRIVRLSNEVETLNGKVKALEHAKTHPSSRAYVQKLDDRKLKEH
                     YLNTEGGSASAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGDGGSIAQRSMYL
                     LLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSL
                     IQAYPSSPAAKRAAAAVRKR"
     gene            6634..7119
                     /gene="purE"
                     /locus_tag="WJJ54_000795"
     CDS             6634..7119
                     /gene="purE"
                     /locus_tag="WJJ54_000795"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEZ7341686.1"
                     /translation="MIQIGIIMGSNSDWPVMRQAAQFLEEFGVEYEACVVSAHRTPDL
                     MFQYAETARARGIKAIIAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIV
                     QMPKGVPVATFAIGEAGAANAALFAVSMLANETPELAQKLADFRAKQEQAVLSMELEQ
                     I"
     gene            complement(7302..8756)
                     /locus_tag="WJJ54_000796"
     CDS             complement(7302..8756)
                     /locus_tag="WJJ54_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HEZ7341687.1"
                     /translation="MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRK
                     AVLTDEEELQSLRDLCEHVRQRSLSKLPALLEQLEENLTKLGVKVHWAETPTEACQII
                     HDIITAKNGKLMVKGKSMVSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVM
                     PAIHKTKEQVSELFHQNLGTPLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAET
                     GTLCLVENEGNGRLSTTVPPVHIAITGIEKVVAKLSDIPPLYSLLPRSAIGQNITTYF
                     NMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRI
                     GGAAYGTTYPGPIGEIISPHLLGLDATRDLPTACTMCGACVEVCPVRIPITEQMQRLR
                     VEAQRSPTETVPHPIRGQGASHTFGEQMAWRTFNGIFSGSKTYRAFGWAATKFRNLTP
                     RKQLGWTQNRVPMKPAKKTLHELMAEKMRQKEQA"
     gene            complement(8753..9454)
                     /locus_tag="WJJ54_000797"
     CDS             complement(8753..9454)
                     /locus_tag="WJJ54_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HEZ7341688.1"
                     /translation="MSARENILAKLKKADALPMEEPAVFDYYREMGVSWGSEVERLKH
                     WAAAMRAVKTEIYWVTKSNWMQVFREAAEGKGLKNILLPLATEHGQIARAALADSNIE
                     PIAFEREIDTWKTEFFTNIDAGFSGAQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCL
                     FDTSKMYNEFHNAVEGEKLVENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILA
                     ILPDHISPADLEENA"
     gene            complement(9451..10230)
                     /locus_tag="WJJ54_000798"
     CDS             complement(9451..10230)
                     /locus_tag="WJJ54_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEZ7341689.1"
                     /translation="MSATIPPKIIRYDSNPTDVYFFGTCVLDLFMPEAGMDAITLIEQ
                     QGIRVHFPMAQSCCGQPAYSSGHPTEAFDVARAQLDLFPEEWPIVVPSGSCGGMMKHH
                     WPTLFKGSEYEERAVDCAGRIIEFTHFLLAIGFKPEDKGEPLKVAVHTSCAARREMNV
                     HLSGWQLIDGMENVERIVHDHESECCGFGGTFSVKQADISGAMVTDKVAALKETGATE
                     IISADCGCMMNIGGKIAKDEPDMPRPKHIASFLLERTGGKA"
     gene            10514..11920
                     /locus_tag="WJJ54_000799"
     CDS             10514..11920
                     /locus_tag="WJJ54_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ7341690.1"
                     /translation="MEKNTLSARAPSPWLPLLLAIAIFMQMLDATILNTALPEIAADL
                     NESPLNMQLAVISYTLTVALLIPLSGYLADRFGTKKVFFGSIAVFMLGSALCAASGSL
                     FELTLSRVVQGIGGSMLVPIPRLTILRVYDKSKLLNAINYAVMPALIGPVLGPLAGGY
                     LVEYASWHWIFLLNLPIGLLGFILGRNIMPDVKGNDTALDFKGYLIFSAAACLLLLSA
                     ESLSHALPPYFALLPLCGGLLFARRYFRHMKTASKPIYSADLFLIRTFRLGLAGNLFS
                     RLGISSIPFLMPLMFQVAFGFGASLSGWLVAPVALSSLLVKPLISTLMKRFGYRKVLL
                     WNTKLLAAFIMLLALPDGNSPLWIWIFLSLAIGACNSLQFSAMNTLTLADLRPQQTGS
                     GNSLMAVNQQLAISMGIVVGALILKNWTFLIPASSGLHSAFRMTLLSIGGITLASSLV
                     FKRLHVSDGANLTRNTPS"
     gene            12032..13558
                     /locus_tag="WJJ54_000800"
     CDS             12032..13558
                     /locus_tag="WJJ54_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HEZ7341691.1"
                     /translation="MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVRLDNI
                     LQIRHTTHTNGLSDIYLLNDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNL
                     VYLAAERGVRVRLLLDDNNTRGLDDLLLALDSHPNIEVRLFNPFVLRKWRALGYLTDF
                     PRLNRRMHNKSFTADNRATILGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDF
                     DRYWASHSAHNATRIIRSGNIGKGLQALGYNDETSRHALLRYRETVEQSPLYQKIQAG
                     RIDWQSVQTRLISDDPAKGLDRDRRKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGT
                     DALAKLVQDGIDVTVLTNSLQATDVAAVHSGYVKYRKPLLKAGIKLYELQPNHAVPAT
                     KDKGLTGSSVTSLHAKTFIVDGKRIFIGSFNLDPRSARLNTEMGVVIESPKIAEQMER
                     TLADTTPEYAYRVTLDRHNRLQWHDPATRKTYPNEPEAKLWKRIAAKILSLLPIESLL
                     "
BASE COUNT         2740 a         3664 c         3828 g         3342 t
ORIGIN      
        1 taagcggtac ggatgtgtaa ataatggtag ggtgggcttc agcctgccga ttcccgctat
       61 tcttgccgtt tttgcgttct tatcattctc actgttttta ccgttcacgc cgaatcctgc
      121 aaactgatgc cgtcattccc gcgaaggcgg gaatctagac ccgtcggcac ggaaatttat
      181 cgagtaaaac ggtttcttag attctacgtt ctagattccc gcctgcgtgg gaatgacggt
      241 cgggtatcag cggaagaagt cgcccacgcc ggggggtaga ccttgcgtga atgcgcccat
      301 tgttttgttt gcggtttctt cggctttgtc acgggcggat ttgagggcgg cgaggatgag
      361 gtcttcgagc atttctttgt cgtcggcggc ttcttgaatc aaatcggggc tgatgtcgat
      421 tttgcgtact tcgtgcgcgc aggtcattgt gattttgacc aagccgttgc ctgcttcgcc
      481 ttcgatttcg gtttcggcaa gtttggcttg cgcttttttc atattttcct gcatttgctg
      541 cgcctgtttc atcaggccgc ctaatccggc ttttccgaac atactgaata ctcctgtttg
      601 tgtttgaatg aatgagggaa acggcaatgc cgtccgaagg gttcgggcgg cattatatct
      661 gtttatggcc ggtttgccgc caattccagt gattcgggct gccattgcgc gccgaatgct
      721 tggaggattt tttgtgcggc ggggtcggct tcgagcaatg cttgtgcttt ttgcctgtct
      781 tcgatttgga cgcgcttgtc ctgcattgcg ggggtttctc tgccggcttc gtcctgccag
      841 tcttgggttt gcagggtgag ttgcagcccg taggcttggg caagggtgtc gcggattttg
      901 tcgaggcgtt ttttgtcggc ggtggcgcgt gcttcggcgg tcatcgccaa aaccatcagg
      961 ccggtgtcgg gatggtattc cgtccacgcg gagtgttgcg ccggcatttg cgccgcgccg
     1021 agtttgcggg cgaaatgccg gacgatggct acccagtttt cggtggaaaa ctcgggcggc
     1081 ggggcggacg gtgtgttgtt tccgccgatg ccgcctgctt ctgcttcttc gtccgcgcct
     1141 ccgcctgcgg tatcggcagg ggcagcgtgt tcccaatcgg gcggcgggat ttctgcgccg
     1201 tcttctacgg ggcagtcatt atccggaaag ccgtaaccgt agaaaggttc tgcaggggct
     1261 tcgtgcgcaa atgcttccgt ttcaacggct tcatcattcg gtgttgcctg aatggggttt
     1321 tcagacggca cttcggacaa gggggcatcg gtttcgttgt cggctgcctt gttcttggaa
     1381 acttggtttt cgggcggcgt ttcggcttcg gatgccgtct gaatgctttt tgccgacgtt
     1441 tgcgccgtgc cggctgcggc ttgggcttcg tccggtgcgt cttcccaagg cggaacatcg
     1501 ttgttttctt gattggaaac gggttcggca gctttgcctt cagacggcat tgccgctgcg
     1561 gatgccgtct gaacggatgt ttgggcggtt tctgcttcag ggcgcggttg gggctttttt
     1621 gcagcggttt ccttttcggc ggtttgtgcc gatggggatt ttagttcggt attttcaatc
     1681 acggcgtttg catcacacga agctgccgcc aagggcgcaa acgccagcat acgcagcagg
     1741 gtcatcataa agccggcgta ttcgtcgggg gcgaggctca ggtcgcgttt gccgtggacg
     1801 gcgatttggt agtaaagctg gatttgttcg ccgcttatgg tttgggcgag gcggtgcaaa
     1861 atatcggaat cggggtcgta gtgcgccaag gcggagggca ccgcctgtat cagggcgagg
     1921 tgttgcagca gtatggcaag ttcgcccaag gcgttgtcaa agccgacggc acacgccgcc
     1981 atttcctgcg ctttggagag cagggctgcg ccgtcttggt tgatgatgcc tgtcaagagt
     2041 tcgtaaaggt attgtttgtc aaccgcgccg atcatttggc ggacatcgtt ttcggcaact
     2101 ttgcccgaac ctagggcgat ggcttggtcg agcaggctca aggcatcgcg catcgatccg
     2161 gcggcggcgc gtcccaaaag ttgcagggcg acgggttcgt aggcgatttt ttcgctgtcg
     2221 aggacgtggg cgaggtggtc ggcaacctgc tgcgaagtca tattgcgcaa gacgaattgc
     2281 aggcagcggc tcaagacggt aacggggact ttgtgcggat cggtcgtggc aaggatgaat
     2341 ttgacgtgtt cgggcggctc ttccagcgtt ttgagcatag cgttgaacgc gcttttggaa
     2401 agcatatgca cttcgtcgat gatatagact ttgtatttgc cggcggtcgg cgcgtattgg
     2461 gcgttttcca agacttcgcg gatgttgtcg atgcctgtgt tggaggcggc gtcgatttcg
     2521 agcaggtcga catagcgtcc ggcatcgatt tgggtgcagc tttcgcacac gccgcaaggt
     2581 tcgccgtgtt gcgcgttttc gcagttgagg cttttggcaa ggatgcgggc aatggtggtt
     2641 ttgcctacgc cgcgcgtacc ggtcagcagg taggcgtggt gcagcctgcc ttcgtctaga
     2701 gcgttttgca gggctttgac gacgtgttcc tgaccgacta agtcggaaaa ggttttgggc
     2761 cgccattttc gggcgagaac ttgataggcc atgtttttct cttggtttcg gtcgtgatgt
     2821 ttctgtcggt gcgtcggaat gccgtctgaa cggcggtctc gggcggcgta ttctagcact
     2881 ttcggcttac tgtccgcgca agaacagtgc gtccaattct ttcaaagtca gtttgaccca
     2941 agtcggcctg ccgtggttgc actggttgct gcgcggcgta ttttccatat cgcgcagaag
     3001 ggcgttcatt tcgggcaggg tgagccggcg gccggcgcgg atcgagccgt ggcaggacat
     3061 ggtggcgagg atgcggtttt cgtgttcctc gatggtttgg ctgctgccga cttgggcgag
     3121 ttcgtttaat acgtctttgg cgagcgagac gacatcggct ttgccgagca tggcgggaac
     3181 tgcacggacg gcgagggtgt tgccgcccat atcggataat tccagcccga agcctgccag
     3241 cgtttcggca taatcggcaa gggcggcgca ttcttcgtgg gacgcggcaa aggttacggg
     3301 aataagcagg cgctggcttt gcagattgcc gttttcttga cgttggcgtt tcattttttc
     3361 gtagttgacg cgttcggcgg cagcgtgcat atcgatgagc aacagactgt cttcggcttg
     3421 ggcaaggatg tagatgccaa gtaattgagc aatggcgaag ccgagcggcg gcagttcgga
     3481 ttgggacggg atgccgtctg aaagcggcgc atctgttttg ggagtaggcg tttcagacgg
     3541 catattgccg aaacgtgcct gctctaatcg gttcaactca aggtcgatgt cgtcggtttt
     3601 tttgtaaagc tcggcgtaag tattcatggc tgcgcggctt tcgcgcaagg acaggctgcg
     3661 ttgttgcggc gcacgagcgg cttggtaagg cataggcgcg gttttgcctg atgcaccaaa
     3721 ggcattgcgt gtatcgggtt tgttgcccgt cgggtagttg gatgcgcgat caaacagatt
     3781 ttcgctgttg ttttcagacg gcattggtgc aggcgtaacg ccagtaatgt catgcaacac
     3841 ttcgcctgcg ttgccgacgc tttcggtcag gtcggcgcgt gtgtcggcaa gggctttgtt
     3901 gagcgtgtgg aacacgagtt ggtgcacctg ctggctgtcg cggaagcgga tttcggtttt
     3961 ggtagggtgg acgttgacat ccacggcttc gggcggcagg tcgagaaaga ggacgaaagc
     4021 aggcgtcagc gcgttgtgca atacgtcgcg gtatgcctgt ttgacagcat ggagcatgac
     4081 tttgtcgcgg acaaaacgat ggttgacgaa gcagtattgt ttgtcggttt tgcctttggc
     4141 gaaagtcggc ttggcaatcg cgccatagag ccgcaatgcg ccgttgccgc tgtcgatttc
     4201 taaggatgcc gtctgaaaat catcgccgac aatggcggca atacgttcat gcaggctttg
     4261 ggcaggaagt ttgaacactt gtttgccgtc gcgtttgagc gagaaggcaa tgtgcggatg
     4321 cgccagcgcg aggcgttcga gcatcgtggc acagtgggcg tattcggtgg cttcagactt
     4381 gaggaacttg cgccgcgcag gggtattgaa gaagagttcg gcggcttcga tggtcgtgcc
     4441 gacggggtgg gcggctgccg tagggctgct gagtttgccg tcttcggctt tgacttgtgt
     4501 cgcgtgtgcg ctgccgtctt ggcggctggt cagggtcagg cggctgacgg aggcgatgct
     4561 tgccaagcct tcgccgcgaa agcccatact ggcgacgtgt tccaaatcgt ttaaggtttt
     4621 gattttgctg gtagcgtggc ggtggagtgc gagtttgatg tcgtccggat ggataccgct
     4681 gccgttgtcg ctgacgcgga tgagacggat gccgccgccc gccagttcga catcaatcgc
     4741 cgtcgcgcct gcgtctatgc tgttttcaac gatttctttc agggcgttgg cagggcgttc
     4801 gaccacttcg ccggcggcga tttggttgac gagatggtcg ggcagggcgg caatgcgtgg
     4861 cataaggtag gcttccgttg caaaaacgct ttattctata ataaaacccc ttacttttct
     4921 gcctgtattc ttgataaaag ccgtttatcc cgtttggaaa ataccagtat aatcacgccg
     4981 tatcccgtaa aattggagcg caaagatgta tcactaccaa tccgaagcca cacaattcct
     5041 caaccgcctg attgaagaaa aacctgagtt ggaacagcag cgtttggaaa accgggggct
     5101 tttgtgggat gtcgaactca atcccgaaga acaggaaaac ttcgaggcgg caaaagtagc
     5161 gaaaaaacct tatacctatt accaagactg aacccgccga aatgacgacc catctgtcca
     5221 atgtcgcccc cgacctgcaa aactatttga acgccatcgg cgaacccgaa catcccgttt
     5281 tgacgcggct gcgtgagaag accgggcatc accgtatggg caaaatggcg attgcgcgcg
     5341 aacaggcggc ggttttggtt tggctggcaa agctgattcg cgcggaaaaa tatctggaag
     5401 tcggcgtatt taccggatac agcagcaccg cgcttgcatt ggcgttgcca aaacacgggc
     5461 ggattaccgc ctgcgacatc aatgtaacct ttaccgatac ggcgcgtcag gtttggaacg
     5521 aggcaggcgt ggcacataaa atcagcctgc atctgcaacc cgcattgctg acattggatg
     5581 atttgattgc acagggtgaa gccggaagct acgatttggc actgatagac gcagacaaac
     5641 cgcccacgcc gcaatatttc gagcgttgcc tcaagcttgt ccggcaaggc ggcatcattg
     5701 ccatcgacaa tattttgttg aacggaaggg tgatgcgcga agcggcttcc gatgcgccgc
     5761 ccagcgtcgg catcctcaaa gattttaatc aaaacctgcc gaacgatacg cggattgtcc
     5821 ccatcaccct gcccgtcggc gacggtttga ccctgcttct gaaaaaataa tgaagaccaa
     5881 attaccgctt tttatcattt ggctgtccgt atccgccgcc tgttcttccc ctgtttcccg
     5941 caatattcag gatatgcggc tcgaaccgca ggcagaggca ggtagttcgg acgctattcc
     6001 ctatcccgtt ccgaccttgc aagaccgttt ggactatctg gaaggcagaa tcgtccggct
     6061 gtcgaacgaa gtggaaacct taaacggcaa agtcaaagca ctggagcatg cgaaaacaca
     6121 cccttccagc agggcatacg tccaaaaact cgacgaccgc aagttgaaag agcattacct
     6181 caataccgaa ggcggcagcg catccgcaca taccgtcgaa accgcacaaa acctctacaa
     6241 tcaggcactc aaacactata aaagcggcag gttttctgcc gctgcctccc tgttgaaagg
     6301 cgcggacgga ggcgacggcg gcagcatcgc gcaacgcagt atgtacctgt tgctgcaaag
     6361 cagggcgcgt atggggaact gcgaatccgt catcgaaatc ggagggcgtt acgccaaccg
     6421 tttcaaagac agcccaaccg cgcctgaagc catgttcaaa atcggcgaat gccaatacag
     6481 gttgcagcag aaagacattg caagggcgac ttggcgcagc ctgatacagg cttacccgag
     6541 cagcccggcg gcaaaacgcg ccgccgcagc cgtacgcaaa cgatagtttt tccatttttc
     6601 cgctttttac cccatccgca ccaaggagga tttatgattc aaatcggcat catcatgggc
     6661 agcaacagcg attggcccgt tatgcggcag gcagcgcagt ttcttgaaga gttcggcgta
     6721 gaatatgagg cgtgcgtcgt ttccgcacac cgcaccccgg atttaatgtt ccaatacgcc
     6781 gaaaccgcac gggcgcgcgg catcaaagcc atcatcgcgg gtgcgggcgg cgcggcgcat
     6841 ttacccggta tggttgccgc caagaccacc gtccccgttt tgggcgtacc cgtccccagc
     6901 aaatacctgc gcggcgaaga ttcgctttta tcgattgtac aaatgcccaa aggcgtaccc
     6961 gtcgccacat tcgccatcgg cgaggcaggc gcggcaaatg ccgcattgtt cgccgtttcc
     7021 atgctcgcca acgaaacccc cgaactggcg caaaaactgg cagacttccg agccaaacag
     7081 gaacaggctg ttttgagtat ggaattggaa cagatttaaa acccgccgtc cgcgaatata
     7141 tagtggctta aatttaaacc agtacggcgt tccctcgcct tgccgtacta tttgtactgt
     7201 ctgcggcttc gtcgccttgt cctgattttt gttaatccac tatacaaatg ccgtctgaag
     7261 ccctgtttcg ggtttcagac ggcatttttg cgaacaactt tttatgcctg ttctttttgg
     7321 cgcatttttt ctgccattag ttcgtgcagg gttttcttcg ccggtttcat cggcacgcgg
     7381 ttttgcgtcc aacccaactg tttgcgcggg gtcaggttgc ggaacttggt ggctgcccaa
     7441 ccgaaggcgc ggtaggtttt gctgccgctg aaaataccgt tgaatgtgcg ccacgccatt
     7501 tgttcgccga aggtatgcga tgcgccttgc cctcggatgg ggtgcggcac ggtttcggtc
     7561 ggcgaacgtt gcgcttcaac gcgcaaacgc tgcatttgtt cggtaatcgg gatgcgtacc
     7621 ggacagactt ccacacacgc accgcacatg gtacaggcgg tcggcaggtc gcgggtggca
     7681 tccagaccca acaggtgagg ggaaataatc tcgccaatcg ggccgggata ggttgtgccg
     7741 tatgccgcgc cgccgatgcg ggtataaacc gggcaatggt tcatacacgc gccgcaacgg
     7801 atacattgca gggtgcggcg catttggtct tcggcataag cctggctgcg gccgttgtcg
     7861 agcagaacca agtgcatttc ttgcggaccg tctaattctt cactgcggcg cgggccggta
     7921 atcatattga aataggttgt gatgttctga ccgatggcgg agcgcggcag cagactgtac
     7981 aagggtggga tgtcggacaa tttcgccacc actttttcaa tgccggtaat agcgatatgc
     8041 acgggcggaa cggtggtact caagcgaccg ttgccctcgt tttccaccag acacagcgta
     8101 cctgtttcag caacggcaaa gtttacgcca ctcaagccga catcggcagt gctgtaaata
     8161 tcgcgcaggg ctttgcgggc gaagccggtc agttggtcca catcgtctgt aagcggtgtg
     8221 ccgaggtttt ggtggaacag ttcgctcacc tgttctttgg ttttatggat tgcaggcatc
     8281 acgatatggg tcggtttttc gcctgccatt tggacgatga actcgcccaa gtcgctttct
     8341 accgctttaa tgccttttgc ttcaagataa tggttcagct cgatttcctc gctgaccatc
     8401 gatttgcctt tgaccatcag cttgccgttt ttggctgtga tgatgtcgtg gataatttgg
     8461 caggcttcgg tcggggtttc tgcccagtgc actttcacgc ccaacttagt caggttttct
     8521 tccagctgct ccagcagggc tggcaattta gacaatgagc gctgacggac gtgttcgcac
     8581 aaatcgcgca ggctttgcag ctcttcttcg tcggtcaaaa cggctttgcg tttggtcatc
     8641 agcatatcca tcgcggtacg caggcttttg cgcaaaggct tgtcttgaag ggaaattgcg
     8701 gcgttttgct tgaaagtttc cggcttcatg tgaaatttga tggtttgcgt agtcatgcgt
     8761 tttcctccaa atcggcaggg gaaatgtggt cgggcaggat ggcgaggatg accaaatcgc
     8821 gcgggccgtg cgcgccgtaa gcaagcgtca gttggatgtc tgcggttttg gacgggccgg
     8881 aaatcaggaa tacattggtc ggcataccgt tttccaccag tttttcgcct tcgacggcat
     8941 tatgaaactc gttgtacatc ttggacgtat cgaacaggca gaaatgcacg ggcggaacga
     9001 gactcaaagt acgcggttct tcggggctgg aaaacagcat cagcgtgccg gtgcgggcga
     9061 tgccgcattg cgcgccgctg aagcccgcat cgatgttcgt gaaaaactcg gttttccaag
     9121 tatcgatttc gcgctcgaag gcaatcggtt cgatattgct gtccgccaat gcggcacggg
     9181 caatttgtcc gtgttcggtc gccaagggca gcaggatgtt tttcaaaccc ttgccttctg
     9241 ccgcttcgcg gaaaacctgc atccaattgc ttttcgtcac ccaataaatt tcggttttga
     9301 ccgcgcgcat tgcggcagcc caatgtttca gacgctcaac ttcgctgccc caagaaacac
     9361 ccatttcacg gtaataatca aaaaccgcag gttcttccat cggcaatgcg tcggcttttt
     9421 tcagttttgc caaaatattt tcgcgcgcgc tcatgctttg cctccggtgc gttccaacaa
     9481 gaaggatgcg atatgtttcg gacgcggcat atccggctcg tccttggcga ttttgccgcc
     9541 gatgttcatc atacagccgc agtccgcgct gatgatttcg gttgcgccgg tttctttcag
     9601 cgcggcgact ttgtctgtta ccattgcgcc ggaaatatcg gcttgtttga cggagaatgt
     9661 gccgccgaag ccgcaacatt cgctttcgtg gtcgtggacg atgcgttcga cgttttccat
     9721 accgtcaatc agttgccagc ctgaaagatg gacattcatt tcgcggcggg cggcgcagga
     9781 agtgtgaacg gcgactttga gcggttcgcc cttgtcttcg ggtttgaaac cgatggcaag
     9841 caggaaatgg gtaaactcga tgatgcggcc ggcgcaatcc acagcccttt cctcgtactc
     9901 gctgccttta aacagcgtcg gccaatggtg cttcatcata ccgccgcacg aaccggacgg
     9961 tacgacaatc ggccactcct cggggaaaag gtcgagttgc gctctggcga catcgaaggc
    10021 ttcggtcgga tggccggatg aataggcggg ctggccgcag cagctttgcg ccatcgggaa
    10081 atggacgcgt atgccctgtt gctcgattag ggtaatggca tccatgcctg cttcgggcat
    10141 aaaaagatca aggacgcaag tgccgaaaaa atagacatcg gtcggattgc tgtcgtatcg
    10201 gatgattttt gggggaatgg ttgcgctcat gttttttgat aacgggaaac ccgttttttt
    10261 ctgtagaaag gtaagcgttt actttaagta attgactgtt gcgggtcaag tctaatttta
    10321 aaaaataatc cggtttttct tacaaactac cccataacgc ttactgtacc ttaatctgat
    10381 agttttcgat aataattatc attacaatgc aatgccggtt cgtttgcttg tgaacattca
    10441 agatgccgac tctgacggca ttcagacagc atctgaaaac aataacggca caaggatggg
    10501 gtacaatcgc tctatggaaa aaaacaccct atccgcccgc gcaccatccc cttggctgcc
    10561 gcttctgctg gcaattgcca tttttatgca gatgttggat gcgaccattt taaataccgc
    10621 actgcctgaa attgccgccg acctgaatga gtcgccattg aacatgcagc tggcggttat
    10681 ttcctacacg ctgacggttg ccctgctgat tcctttgagc ggttatttgg cggacaggtt
    10741 cggaacgaaa aaagtctttt tcggttcgat tgccgttttt atgctcggat cggcattgtg
    10801 cgccgcatcg ggttcgctgt ttgaattgac gctttcccgt gtcgttcagg gcatcggcgg
    10861 ttcgatgctg gttccgatac cgcgtctgac catcttgcgt gtgtacgaca agtccaagct
    10921 gctcaacgcc atcaattatg cggttatgcc cgcattaatc ggaccggttt tagggccttt
    10981 ggcgggcggt tatctggtcg aatacgcttc gtggcactgg attttcctgc tcaacctgcc
    11041 catcggtctt ctgggtttca tattgggacg caacatcatg cccgatgtca aaggcaacga
    11101 taccgctctg gattttaaag gctatctgat tttttctgcc gccgcgtgcc tcttgttact
    11161 ttcggcagaa agcctgtcgc acgcgctgcc tccgtatttt gcactgttgc cgctgtgcgg
    11221 cggactgctg tttgcacgcc gttatttccg acatatgaaa accgcgtcca aaccgattta
    11281 ttccgccgac ctgtttctga tacgcacttt ccgtctagga ctggcgggca atctgttcag
    11341 ccgtctcggc atcagctcga ttccttttct gatgcccctg atgtttcaag tcgctttcgg
    11401 cttcggcgca agcctgtcgg gttggctggt cgcacccgtc gccctgtctt cgctgctggt
    11461 caagccgtta atctccacct tgatgaagcg tttcggctac cgcaaggtgc tgctttggaa
    11521 caccaaactg cttgccgcct tcatcatgct gctcgccctg cctgatggaa actcgccgct
    11581 gtggatttgg attttcctct cgctggcgat cggcgcgtgc aactccctac agttttctgc
    11641 catgaacaca ctgaccctcg ccgatttgcg cccgcaacag accggcagcg gcaacagcct
    11701 gatggcggtc aaccaacagc ttgccatcag catgggcatt gttgtcggcg cattaatcct
    11761 taaaaactgg acatttctga taccggcttc ttcaggtctg cattccgcct tccgtatgac
    11821 cctgctcagc atcggcggca tcacccttgc ctcgtcgttg gttttcaagc gtctgcacgt
    11881 ttcagacggc gcaaacctga cacggaacac accgtcctaa agcggtccgc acgcaaaact
    11941 tttacccctt tcaacgtttg gattatgatg ccgcacttcc atgcgcgcca accccaaaac
    12001 acaggcaatg ccgtctgaaa ccatatccct gatgaaaaca cgcagcctaa tttccctttt
    12061 atgcctcctt ctctgttcat gttcttcatg gttgccccca ctggaagaac ggacggaaag
    12121 ccgtcatttc aatacttcca aacccgtccg cctggacaac atcctgcaaa tccggcacac
    12181 cactcatacc aacgggctat ccgatatcta tctgctgaac gacccccacg aagcctttgc
    12241 tgcccgcgcc gcccttatcg aatctgccga acacagcctc gatttgcaat actacatctg
    12301 gcgcaacgac atttccggcc gactgctgtt caacctcgtg taccttgccg cagaacgcgg
    12361 cgtgcgcgta cgcctgctgt tggacgacaa caacacgcgc ggcttggacg acctcctgct
    12421 cgccctcgac agccatccca atatcgaagt gcgcctgttc aaccccttcg tcttacgaaa
    12481 atggcgcgca ctcggctacc tgaccgactt cccccgcctc aaccgccgca tgcacaacaa
    12541 atcctttacc gccgacaacc gcgccaccat actcggcgga cgcaatatcg gcgacgaata
    12601 cttcaaagtc ggtgaggaca ccgttttcgc cgacctggac atcctcgcca ccggcagcgt
    12661 cgtcggcgaa gtatcgcacg acttcgaccg ctactgggca agccattccg cccacaacgc
    12721 cacgcgcatc atccgcagcg gcaacatcgg caagggtctt caagcactcg gatacaacga
    12781 cgaaacgtcc agacacgcgc tcctgcgcta ccgcgaaacc gtcgaacagt cgcccctcta
    12841 ccaaaaaata caggcaggac gcatcgactg gcagagcgtc caaacccgcc tcatcagcga
    12901 cgaccctgca aaaggactcg accgcgaccg ccgcaaaccg ccgattgccg ggcggctgca
    12961 agacgcgctc aaacagcccg aaaaaagcgt ctatctggtt tcaccctatt tcgtccccac
    13021 aaaatccggc acagacgcac tggcaaaact ggtgcaggac ggcatagacg ttaccgtcct
    13081 gaccaactcg ctacaggcga ccgacgttgc cgccgtccat tccggctatg tcaaataccg
    13141 aaaaccgctg ctcaaagccg gcatcaaact ctacgagctg caacccaacc atgccgtccc
    13201 tgccacaaaa gacaaaggcc tgaccggcag ctccgtaacc agcctgcatg ccaaaacctt
    13261 cattgtggac ggcaaacgca tcttcatcgg ctcattcaac ctcgaccccc gttccgcacg
    13321 gctcaatact gaaatgggcg ttgttatcga aagccccaaa atcgcagaac agatggagcg
    13381 cacccttgcc gataccacac ccgaatacgc ctaccgcgtt accctcgaca ggcacaaccg
    13441 cctgcaatgg cacgatcccg ccacccgaaa aacctacccg aacgaacccg aagccaaact
    13501 ttggaaacgc atcgccgcaa aaatcctatc cctgctgccc atagaaagtt tattatagaa
    13561 atatagtgga ttaa
//
LOCUS       DAWKJW010000037        13546 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.037, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000037 DAWKJW010000000
VERSION     DAWKJW010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13546
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.037"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            309..1145
                     /locus_tag="WJJ54_000801"
     CDS             309..1145
                     /locus_tag="WJJ54_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEZ7341692.1"
                     /translation="MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIA
                     EARAEADRLGLRLINGVEISVTWRGRTIHVVGLDFDEQDENLQNLLAQVRQGRLKRLE
                     AIAAKLEKRGISGAYDGALALAANKEMVSRTHVAEFLIRVGHVKNKQQAFTKYLGDGK
                     SCAVRHEWATLADCVSAVNGAGGMAVIAHPMRYDLSATAKRNLFEEFKNLGGAGIEVH
                     SGNCCKNDRLNYALLAERFGMLASAGSDFHRLNDFSGGILGACPELPENCRPVWAHFS
                     RH"
     gene            complement(1197..2489)
                     /locus_tag="WJJ54_000802"
     CDS             complement(1197..2489)
                     /locus_tag="WJJ54_000802"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HEZ7341693.1"
                     /translation="MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARI
                     PEIDRAFADIFSKLAAEHAVENIGNYSNPQGDAALIDALTAFLNREYGWNLTADNIAL
                     TNGSQNAFFYLFNLFGGKFNLSDGTSAEKAILLPLAPEYIGYADVHIEGQHFVSVKPK
                     IENVEHEGEAGFFKYRVDFDALENLPELKAGKIGAICCSRPTNPTGNVLTDGEMARLD
                     ALAREHGIPLIIDNAYGMPFPNIIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAA
                     PEVVKAVSSLNAIVNLAPTRFGAAIAAPLLESGEMKRLADQVIRPFYRNQAQTAVSLL
                     KRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTQ
                     DYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKLYDNV"
     gene            complement(2547..4457)
                     /gene="pglD"
                     /locus_tag="WJJ54_000803"
     CDS             complement(2547..4457)
                     /gene="pglD"
                     /locus_tag="WJJ54_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent dehydratase PglD"
                     /protein_id="HEZ7341694.1"
                     /translation="MTLETLIALPRNIKKICFLIHDFLMIFIAFWFTQSLKADYSNEW
                     FDPANWQSFLLTAPLTIGLFVRMGLYRAVTRFVSFHVLTTAFAGSIVSAVLFFLNTLI
                     FEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSEHPKKQMTPVIIYGAGQAGRQLLEA
                     VKQMREYSAAAFVDDDPKLWHTVIYDLAVYQPDAIAFLIERYGVEKILLAIPGATQEQ
                     RRRIISKLEAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVAPDNRLMSAD
                     IEGKTVMVTGAGGSIGSELCRQIIRRRPEKLLLFELSEFALYAIEKELRETCIQKRLD
                     TEILPFLGSVQNRTLLEHVMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLEC
                     ALAATASGVRTFVLISTDKAVRPTNTMGAGKRMAELCLQALAAEPGQQTRFSMVRFGN
                     VLGSSGSVVPLFEKQIAQGGPLTLTHPEITRYFMTIPEAAQLVIQAGAMGKGGDVFVL
                     DMGESVKIIDLARQMITLSGLKPKTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRK
                     TGHPRIMTANETMLPWRELSALLDRIRAACDRYDQQAIRTLLINAPTGFAPSDGICDL
                     LWVRETHRKNAV"
     gene            complement(4505..5680)
                     /locus_tag="WJJ54_000804"
     CDS             complement(4505..5680)
                     /locus_tag="WJJ54_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HEZ7341695.1"
                     /translation="MLNTFLSPWPCFTQEEADAVSKVLLSNKVNYWTGNECRKFEKEF
                     AAFAGTRYAVALSNGTLALDVALKAIGIGAGDDVIVTSRTFLASASCIVNAGANPVFA
                     DVDLNSQNISAETVKAALTPTTKAIIVVHLAGMPAEMDGIMDLAKEHDLWVIEDCAQA
                     HGAKYKGKSVGSIGHVGAWSFCQDKIMTTGGEGGMVTTNDKTLWEKMWSYKDHGKSYD
                     AVYHREHAPGFRWLHESFGTNWRMMEMQAAIGRIQLKRLPEWTACRQAHAAKLAESLG
                     KFKSIRLVEVADYIGHAQYKFYAFVKPEHLKDGWTRDRIVGELNARKVPCYQGSCSEV
                     YLEKAFDNTPWRPKERLKNAVELGDTSLMFLVHPTLTDGEIAFCKEHIEAVLTEATR"
     gene            complement(5758..6999)
                     /locus_tag="WJJ54_000805"
     CDS             complement(5758..6999)
                     /locus_tag="WJJ54_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NeuD/PglB/VioB family sugar acetyltransferase"
                     /protein_id="HEZ7341696.1"
                     /translation="MSKAVKRLFDIIASASGLIVLSPVFLILAYLIRKNLGSPVFFIQ
                     ERPGKDGKPFKMVKFRSMRDALDSDGIPLPDSERLTPFGKKLRAASLDELPELWNVLK
                     GEMSLVGPRPLLMQYLPLYDNFQNRRHEVKPGITGWAQVNGRNAASWDERFACDIWYI
                     DHFSLCLDIKILLLTVKKVLIKEGISAQGEATMPPFTGKRKLAVVGAGGHGKVVADLA
                     AALGTYGEIVFLDDRVQGSVNGFPVIGTTLLLENSLSPEQFDIAVAVGNNRIRRQIAE
                     KAAALGFALPVLIHPDSTVSPSATVGQGGVVMAKAVVQADSVLKDGVIVNTAATVDHD
                     CLLDAFVHISPGAHLSGNTRIGEESWIGTGACSRQQIRIGSRATIGAGAVVVRDVSDG
                     MTVAGNPAKPLAGKNTETLRS"
     gene            complement(6992..8158)
                     /gene="pglH"
                     /locus_tag="WJJ54_000806"
     CDS             complement(6992..8158)
                     /gene="pglH"
                     /locus_tag="WJJ54_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminyl-a1,3-N,
                     N'-diacetylbacillosaminyl-a1-diphospho-di-trans,
                     octa-cis-undecaprenol synthase PglH"
                     /protein_id="HEZ7341697.1"
                     /translation="MNITIVAPYCSLPSEPYFNRFWYLAERLSQSHDVLLITSRFRHY
                     DKSFRRHEDAAATSNGRLRVKLLDEPGYRKNVSLARVASHRVFVRNLARWLHSPQAAE
                     QDIVYSAYPLMATNLLLGKHKARLGYKLIVDVQDVWPESFSSVVPFLKKVPHKLLPFA
                     SRANRAYRCADALVAVSQTYLDRAKEANPNVPGEAVYIGTDFAAIAPPPRFRSKTTRL
                     FYLGTLSYSYDVETVCKGVRKLLDDGENVELHIMGGGPDLEKLKQYENRAIKFYGYLP
                     YSEMMSIAKGCDIAVNAIHSHAMQSVTNKLSDYMALQKPILNSQTNAEVLSLLNLLPH
                     ENYRSGDVDSFVQAAKDILKRKNDPVQSDEIVRRFRRDISYRKIVNLIERLANE"
     gene            complement(8178..9251)
                     /locus_tag="WJJ54_000807"
     CDS             complement(8178..9251)
                     /locus_tag="WJJ54_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEZ7341698.1"
                     /translation="MKIVWTTSMAGLGGTETATVRLGRLLRQHGHDIMLASSDGPLLK
                     EAQALGIRWQPVDFYRGGLFGYLKGMIAYARMLRREQPDIIDCQMARVVPACAIAAKI
                     VSPKTKIIYHSHGLDAATYPKIAKLFDKLGVYIIGNCKHEREKLIRHGFPADRIVYAY
                     NALPPPPEFPFWKTVKGCVMLGTLSRLDTVRAVHLMLDIFKKMVDRDMPVRLNVAGIG
                     EEMDNLKAQAERLGIDGKVTFLGGVRDLTAYFKDVDILVNTPHCIGDHGAGVGNNILE
                     AGLYDTPVVTYDMAGISEMVVNGETGYCIPFGEDEAFIEAVDTLIKHPELRGQMGKAL
                     HKHVETLCSDDEIYRTTMAAYTM"
     gene            complement(9248..10669)
                     /locus_tag="WJJ54_000808"
     CDS             complement(9248..10669)
                     /locus_tag="WJJ54_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HEZ7341699.1"
                     /translation="MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQT
                     AAGLTVSVLCLGLDQAYVREYYAAADKDTLFKTLFLPPLLSAAAIAALLLSRPSLPSE
                     ILFSLDDAAAGIGLVLFELSFLPIRFLLLVLRMEGRALAFSSAQLVSKLAILLLLPLT
                     VGLLHFPANTAVLTAVYALANLAAAAFLLFQNRCRLKAVRRAPFSSAVLHRGLRYGIP
                     IALSSIAYWGLASADRLFLKKYAGLEQLGVYSMGISFGGAALLFQSIFSTVWTPYIFR
                     AIEANAPPARLSATAESAAALLASALCLTGIFSPLASLLLPENYAAVRFIVVSCMLPP
                     LFCTLVEISGIGLNVVRKTRPIALATLGALAANLLLLGLAVPSGGARGAAVACATSFW
                     LFFAFKTESSCRLWQPLKRLPLYTHTLLCLTSSAAYTCFGTPANYPLFAGVWAVYLAG
                     CILRHRKDLHKLFHYLKKQGFPL"
     gene            complement(10864..11973)
                     /gene="ribD"
                     /locus_tag="WJJ54_000809"
     CDS             complement(10864..11973)
                     /gene="ribD"
                     /locus_tag="WJJ54_000809"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEZ7341700.1"
                     /translation="MFSDTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQG
                     FHVKAGEPHAEVHALRQAGEMAQGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAA
                     MRDPNPLVAGKGLAMLEAAGIKTECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSL
                     DGKTALSDGSSFWITGEDARADVQVLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQP
                     ARIVLDSRLRLPLDSHLLTDGQSPTYIATLERDEDKLRPYREHAHIRILMPSETADGK
                     IDLHHLMRLLADEGFGEIMVEAGSELTSAFLAEDLADEIVLYRSPKILGGGSGLFCLP
                     ENRAALSAPPLWTPVSSEILGHDIKTVFRKNGNAF"
     gene            complement(12005..12469)
                     /gene="nrdR"
                     /locus_tag="WJJ54_000810"
     CDS             complement(12005..12469)
                     /gene="nrdR"
                     /locus_tag="WJJ54_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HEZ7341701.1"
                     /translation="MKCPFCAHPDTRVADSRLMEERNAVRRRRHCPNCGKRFGTLETA
                     ELKMPAVIGPDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQRD
                     IPSAALADMVLKELLRQDTEAAVRFAALHKRFDNPADFASWLAQAVKTGGKA"
     gene            complement(12498..13340)
                     /locus_tag="WJJ54_000811"
     CDS             complement(12498..13340)
                     /locus_tag="WJJ54_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HEZ7341702.1"
                     /translation="MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGK
                     GVRLFHDDKPSANSPVADLVRAYQIKSENVVAHIRKASQGQTSLANTHPFMREMWGGY
                     WLFAHNGHLIDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAG
                     LTHEIRKFGLFNFMLSDGIALFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTP
                     NDRVAVIATLPLTRDESWSQLAVNELVMFREGNIVRHDRPENPVYMSAEEGLEIARAA
                     GVSV"
BASE COUNT         2725 a         3454 c         4319 g         3048 t
ORIGIN      
        1 caacgctgta ccggtttaaa tttaattcac tataaaacca cgttttcaga cagtctttta
       61 tagtagatta aaattgaaaa catccctatc gtcattcccg cgcaggcggg aatccggaag
      121 tttgaaatag cggttaacct taaacatttc caataaatca aagtctggat tcccgcctgc
      181 gcgggaatga cggtataggg actttttctt tgcatttgcc atacacctgt tttttaaaat
      241 gaccgccgcc gccacactgc ccgacaatat tgccccccga ccttcattca ccacacatat
      301 aacaccccat gatagacctg cactgccatt ccaccgtttc cgacggtatg ctttcccccg
      361 ccgaagtcgt gcgcctcgcg catcaaaacg gctgcacgct gctggcgttg accgaccacg
      421 accacaccgg cggcatcgcc gaagcgcgtg ccgaagccga caggctcggt ttgcgcctga
      481 ttaacggcgt ggaaatctcc gtaacgtggc gcgggcgtac catacacgtt gtcggcttag
      541 actttgacga acaagacgaa aacctgcaaa acctgttggc gcaagtgcgg caaggccgtc
      601 tgaaacgcct cgaagccatc gccgccaagc tggaaaaacg cggcatttcg ggcgcatacg
      661 acggcgcgct cgcgctggcg gcaaacaaag aaatggtcag ccgcacacac gtcgccgagt
      721 tcctcattcg ggtgggacac gtcaaaaaca agcagcaggc gttcaccaaa tacttgggcg
      781 acggcaaatc ctgcgccgtc cgacacgaat gggcgacgct ggcagactgc gtctccgccg
      841 tcaacggcgc gggtggcatg gcagtcatcg cccaccccat gcgctacgac ttgtccgcca
      901 ccgccaagcg caatctgttt gaagaattta aaaacctcgg cggcgcaggc atcgaagtcc
      961 acagcggaaa ctgttgcaaa aacgaccgcc tcaactacgc gcttttggca gaacgtttcg
     1021 gtatgctcgc cagcgcgggc agcgacttcc accgtttaaa cgacttcagc ggcggcatcc
     1081 tcggcgcgtg tcccgagctg ccggaaaact gtaggccggt gtgggcgcat ttctcccgac
     1141 attgaatgcg gataaaaatg ccgtctgaaa ggctttcaga cggcattttt tgcggcttaa
     1201 acgttgtcgt acagttttcg gacggtttta ccgatggcgg caatgccttt ttccagcgtt
     1261 tgagcgtcct gcgcgatgct catacggatg cactcgcccg cgtgcgggta atcctgtgtg
     1321 tcgatgccga cgaagaaatg ttcgcccgga ataatcagcg taccttcggc tttgagcatt
     1381 tcgtacaggg tttgcgaaga aacgggcagg ttttcaaacc agagccacag gaaaatcgcg
     1441 ccttcgggtt tgtggatttt catcgggtac gcgcccagct cgcgcttgag cagcgagacg
     1501 gcggtttgcg cctgattgcg gtaaaacggc cggatgactt ggtcggcaag ccgtttcatc
     1561 tcgccgcttt ccagtagcgg ggcggcgatg gccgcgccga agcgcgtggg ggcaaggttc
     1621 acaatcgcgt tcaggctgct gacggctttg accacttccg gcgcggcgac gatgatgccg
     1681 gtgcgaacgc ccggcaggcc gactttggaa aggctgaagc agaggatgat gttttcatgc
     1741 caattcagcg ttacgtcgct gtaaatgatg ttggggaacg gcattccgta ggcgttgtcg
     1801 ataatcagcg gaatcccgtg ttcacgcgcc aaagcgtcca aacgcgccat ttcgccgtcg
     1861 gtcaacacat tgccggtcgg gttggtcggg cgcgaacagc aaatcgcgcc gattttgccc
     1921 gctttgagtt cgggcaggtt ttccagtgcg tcaaagtcca cgcggtattt gaagaagcct
     1981 gcttcgcctt cgtgttcgac gttttcgatt ttgggcttga cggaaacgaa gtgctgccct
     2041 tcgatatgta cgtcggcata gccgatgtat tcgggcgcga gcggcaacaa aatggctttt
     2101 tctgcggatg tgccgtctga aaggttgaat ttgccgccga agaggttgaa taaatagaaa
     2161 aacgcgtttt gcgaaccgtt ggtcagcgcg atattgtcgg cggtcaggtt ccagccgtat
     2221 tcgcggttga ggaaggcggt caacgcgtca atcagcgcgg catcgccttg ggggttggag
     2281 tagttgccga tgttttcgac ggcgtgttct gccgccagtt tggagaatat gtcggcgaac
     2341 gcccgatcga tttccggaat gcgcgccggg ttgccgccgc cgagcatgtt gacgggcttg
     2401 tcgcttttga gcgcgtcgcc gaggtcgtcc atcagttgga ggatgccgct gtgttgcgtg
     2461 aatttttcgc cgaatgccga aaactgcatg tcaaactccg tgtgtgtgta aggtaggttg
     2521 gtttgtacgt tatgccgtct gaaggttcag acggcatttt ttctgtgtgt ttcgcgaacc
     2581 caaagcaggt cgcagatacc gtcgctcggg gcaaagccgg tcggggcgtt gatgagcagg
     2641 gtgcggattg cctgctggtc gtaacggtcg caggccgcac ggatgcggtc gagcagggcg
     2701 gagagctcgc gccacggcag catggtttcg ttggcggtca tgatgcgcgg atggccggtt
     2761 ttgcggacgt tgtcgccgat gagcagctct tcgtagagtt tttcgccggg acgcagtccg
     2821 gtaatgagga tttcgatgtc gccgtcgggt tgttcgggtg ttttgggttt gaggccgctt
     2881 aaggtaatca tttggcgggc aaggtcgatg attttgacgg attcgcccat atcgaggacg
     2941 aacacgtcgc cgcctttgcc catcgcgccg gcttggataa ccagttgcgc cgcttcgggt
     3001 atggtcatga aatagcgcgt gatttccggg tgggtcaggg tgagcgggcc gccttgggca
     3061 atctgttttt caaacagcgg gacgacggag ccggacgaac ccaaaacatt gccgaaacgc
     3121 accatactga agcgggtttg ctgtccgggt tcggcggcga gcgcctgaag gcagagttcc
     3181 gccatacgtt tgcccgcgcc cattgtgttg gtggggcgga cggctttgtc ggtggagatg
     3241 aggacgaagg ttcttacgcc cgaagccgtg gcggcaagcg cgcattcgag tgtgccgaag
     3301 atgttgttgc gtatgccttc gacggtgttg aactcgacca tggggacgtg tttgtaggca
     3361 gcggcgtgat agacggtcgc aacggaaaag gcggtcatga cgtgttcgag cagcgtgcgg
     3421 ttttgcaccg aaccgagaaa gggcaggatt tcggtgtcga ggcgtttttg gatgcaggtt
     3481 tcgcgcaatt ctttttcgat ggcgtacagg gcgaattcgg ataactcgaa cagcagcagc
     3541 ttttcggggc ggcggcggat aatctggcgg cagagttccg aaccgatgga gccgcccgcg
     3601 ccggttacca tgacggtttt gccttcgatg tcggcactca tgaggcggtt gtcgggcgcg
     3661 acggaatcac gcccgagcag gtcggacaca gagatttttt tgagcgtgcc gatgctgatt
     3721 ttcccgtcca tcaggtcttt cattccggga atggtcaaca cttcgcaggg ataggcttcc
     3781 agtttgctga tgattcggcg gcgttgttcc tgggtcgcgc cggggatggc gagcaggatt
     3841 ttttccacgc cgtagcgttc gatgaggaag gcgatggcat cgggctggta aacggcaagg
     3901 tcgtagatga cggtgtgcca cagtttgggg tcgtcgtcca caaaggcggc ggcggaatat
     3961 tcgcgcattt gtttgacggc ctcgagaagc tgtctgcccg cctgccctgc gccgtaaata
     4021 atgacggggg tcatctgttt tttggggtgt tcggacagca gcccgcgcaa aaccatacgc
     4081 gagccggtta cggagacaaa cagcagtaag aaatagacaa tcggcagggc gaggcgcagc
     4141 ctttcttcaa aaatcaatgt gttgaggaag aacaggacgg cggaaacaat gctgccggca
     4201 aaagcggtgg tcaggacgtg gaaactgaca aagcgtgtaa cggcacggta gagtcccatt
     4261 ctgacgaaca ggccgatggt caacggcgcg gtcaatagga aagactgcca gttggcaggg
     4321 tcgaaccatt cgttcgagta gtcggccttt aggctttggg tgaaccaaaa ggcaatgaaa
     4381 atcatcagaa aatcgtgtat gaggaaacag attttcttga tgttgcgcgg cagggcgatc
     4441 agggtttcca gagtcatatc gtggggcggt atgtgctttc aggcggcata tgccgtctga
     4501 agggttatcg tgtggcttcg gtcaatacgg cttcgatgtg ttctttgcag aacgcgattt
     4561 cgccgtcggt cagcgtcgga tgcaccaaga acatcaggct ggtgtcgccc aactcgacag
     4621 catttttcag ccgctctttc ggtcgccacg gcgtgttgtc gaaggctttt tccaaataga
     4681 cttcggagca gctgccttga tagcagggga ctttgcgcgc gttcagttcg ccgacgatgc
     4741 ggtcgcgcgt ccagccgtct ttgaggtgtt cgggtttgac gaaggcgtag aacttatatt
     4801 gcgcgtgtcc gatgtagtcg gcgacttcaa ccaagcggat acttttgaat ttgcctaggc
     4861 tttccgccag cttggcggcg tgcgcttgac ggcaggcagt ccattcgggc aggcgtttga
     4921 gctggatgcg cccgattgcc gcctgcattt ccatcatacg ccagtttgtg ccgaaacttt
     4981 cgtgcagcca gcggaaaccg ggcgcgtgtt cgcggtggta cacggcatcg tagcttttgc
     5041 cgtggtcttt gtacgaccac attttttccc acagggtttt gtcgttggtc gtaaccatgc
     5101 cgccttcgcc gcccgtggtc atgattttgt cttggcagaa cgaccatgcg ccgacgtgtc
     5161 cgatgctgcc gacggatttg cctttgtatt tcgcgccgtg cgcttgggcg cagtcttcga
     5221 tgacccacaa atcatgttct tttgccaagt ccatgatgcc gtccatttcg gcgggcatac
     5281 cggcgaggtg gacgacgatg atggctttgg tagtcggtgt cagcgcggct ttgacggttt
     5341 ccgcgctgat gttttggctg ttcaaatcca catcagcaaa caccggattt gcgcccgcgt
     5401 tcacaatgca ggacgcggaa gccaagaaag tgcgcgaggt aacaatcaca tcgtcgcccg
     5461 cgcctatgcc gattgctttg agcgcgacat cgagtgccag cgtgccgttg gaaagggcga
     5521 cggcgtaccg cgtgccggca aaggcggcga attctttttc aaatttgcgg cattcgtttc
     5581 ccgtccagta gttgactttg ttggacagca ggactttgga aacggcatcg gcttcttctt
     5641 gggtgaagca gggccacggg gaaaggaaag tgttcagcat ggtgtttggt ccgtcggttt
     5701 tcagacggca tttcctcatt tctgccgtct gttgcttagg ctgtttattt taatcgttta
     5761 cgaccgcagg gtctcggtat ttttgcctgc caatggtttt gccgggttgc ccgcgacggt
     5821 catgccgtct gaaacgtcgc gcacgacgac tgcgcccgct ccaatggttg cgcggctgcc
     5881 gatacggatc tgctggcggc tgcacgcgcc tgtgcctatc cagctttctt cgccgatacg
     5941 cgtgttgccc gacaggtgcg cgcccgggct gatgtggacg aaagcatcaa gcaggcaatc
     6001 gtgatcgacg gtggcggcag tgttcacaat cacgccgtct ttcaatacgc tgtcagcctg
     6061 tacgacggct ttcgccataa cgacgccgcc ttgtccgact gttgcagaag gcgagacggt
     6121 cgagtccgga tgaatcagga cgggcagggc gaagccgagc gcggcggctt tttcggcgat
     6181 ttggcggcgg atgcggttgt tgccgacggc gacggcgatg tcgaattgtt cgggcgataa
     6241 actgttttca agcagcagcg tcgtgccgat gacggggaag ccgttgacgc tgccttggac
     6301 gcggtcgtcc agaaaaacga tttcgccgta tgtgccgagt gcggcggcaa ggtcggcaac
     6361 gacttttccg tgtccgcccg cgccgacgac ggcaagtttg cgttttcctg tgaaaggggg
     6421 catggtggct tcgccctgtg cggaaatccc ttctttgatt aatacttttt taaccgtcag
     6481 cagtaggatt ttgatgtcga ggcacaggct gaagtggtcg atataccaga tgtcgcatgc
     6541 gaagcgttcg tcccatgagg cggcgttgcg cccgttgacc tgcgcccagc cggtaatgcc
     6601 gggtttcact tcgtggcggc ggttttggaa gttgtcgtac agcggcagat attgcatcag
     6661 cagcgggcgc gggccgacca ggctcatctc gccttttaag acattccata attcaggcag
     6721 ttcgtccaaa ctggcggcgc gcagtttttt gccgaagggc gtgagccgct cgctgtcggg
     6781 cagcggaatg ccgtctgaat caagcgcgtc gcgcatggaa cggaatttga ccattttaaa
     6841 aggttttccg tcctttccgg ggcgttcttg aatgaagaag acgggcgaac ccagattctt
     6901 gcggatgagg tacgccaaaa tcaggaaaac gggtgagagg acaatcagcc ccgatgcgga
     6961 tgcgatgatg tcgaacaggc gtttgacggc tttactcatt tgccaatctt tcaatcaggt
     7021 tgacgatttt ccgataggaa atgtcgcgcc tgaagcggcg gacgatttca tcggactgaa
     7081 cggggtcgtt tttgcgtttc aaaatatctt tggcggcttg aacgaagctg tccacgtcgc
     7141 cggaacggta gttttcgtgc ggcagcaggt tcaagaggct aaggacttcg gcattggtct
     7201 ggctgttcag aatcggtttt tgcaaagcca tatagtcgga gagtttgttg gtaaccgact
     7261 gcatggcgtg gctatggatg gcgttgacgg caatgtcgca gcctttggca atcgacatca
     7321 tttcagaata gggtaaataa ccgtaaaact tgatggcgcg attttcatat tgtttgagtt
     7381 tctccaaatc gggtcctccg cccataatgt gcaattcgac gttttcgccg tcgtctaaaa
     7441 gtttccgaac acctttgcac acggtttcca cgtcgtagct gtaactgagc gttcccaagt
     7501 agaaaaggcg ggtggttttg gagcggaatc gcgggggggg ggcgatggcg gcaaaatccg
     7561 taccgatata gacggcttcg ccgggtacgt tcggattggc ttctttggcg cggtcgagat
     7621 aagtctgcga tacggcaacc agcgcgtcgg cgcagcggta ggcacggttg gcgcgtgaag
     7681 caaagggcag cagcttgtgc ggtacttttt tcaaaaatgg tacgaccgag gagaaagact
     7741 ccggccatac gtcctgcaca tcgacaatca gtttgtagcc caaacgcgct ttgtgtttgc
     7801 ccaacagcag gttggtcgcc atcagcggat aggcagaata gacgatgtcc tgttccgccg
     7861 cctgcgggct gtgcagccag cgtgccaaat tgcggacgaa tacgcggtgg ctggcgacgc
     7921 gggcgaggga gacgtttttt cggtagccag gttcgtccag cagcttgacg cgcagcctgc
     7981 cgtttgaagt ggcggcagca tcttcatgcc gtctgaatga tttgtcgtag tggcggaaac
     8041 ggctggtaat cagcaacacg tcgtgcgatt gcgacaatcg ttctgccaga taccaaaagc
     8101 ggttgaaata cggttcggac ggcagcgagc aataaggggc gactatggtg atgttcatcg
     8161 gcggctttca gacggcatta catggtatac gccgccatgg tggtacggta gatttcgtcg
     8221 tcggaacata aggtttcgac gtgtttgtgc agggctttgc ccatttgacc gcgcaactcc
     8281 ggatgcttga tgagtgtatc gacggcttcg ataaacgctt cgtcttcgcc gaaaggaatg
     8341 cagtaacccg tttccccgtt gacgaccatt tcggaaatgc ccgccatatc gtaggtaacg
     8401 acgggcgtgt cgtaaagtcc ggcttctaag atgttgttgc ccacgcctgc gccgtggtcg
     8461 ccgatgcagt ggggcgtgtt caccaaaata tccacgtctt tgaagtaggc ggtcaaatcg
     8521 cgcacgccgc cgaggaaggt aactttgccg tctatgccca gacgttccgc ctgcgctttc
     8581 aaattgtcca tttcttcgcc tatgcccgcc acgttcaggc gtacgggcat atcgcggtcg
     8641 accatttttt tgaaaatgtc cagcatcaga tgcacggcgc ggacggtgtc cagacgcgac
     8701 agcgtgccga gcatgacgca gcctttgacg gttttccaga aaggaaattc cggggggggg
     8761 gggagtgcgt tgtaggcgta gacaatccgg tcggcgggga aaccgtggcg gatgagtttt
     8821 tcgcgttcgt gtttgcagtt accgatgatg tacacgccca gcttgtcgaa gagtttggcg
     8881 attttggggt aggttgccgc gtccaaaccg tgcgagtggt agatgatttt ggttttcggc
     8941 gaaacgattt tggcggcaat ggcgcaggcg ggtacgacgc gcgccatttg gcagtcgatg
     9001 atgtcgggtt gttcgcgccg cagcattcgg gcgtaggcaa tcataccttt gaggtagccg
     9061 aaaaggccgc cgcgatagaa atcgacgggt tgccaacgta tgcccaaggc ttgcgcctct
     9121 ttgagcaacg gtccgtccga agaggcaagc atgatgtcgt gtccgtgctg cctgagtagc
     9181 ctgccgaggc ggacggtggc ggtttccgtg ccgcccaagc ctgccataga tgtggtccaa
     9241 acgattttca taatgggaaa ccttgttttt tcaaataatg aaacagtttg tgcaaatctt
     9301 tccggtggcg caggatgcag cctgccagat ataccgccca tacgccggca aacagggggt
     9361 agtttgccgg tgtgccgaag caggtgtagg ccgccgagga ggtcaggcag agcaatgtgt
     9421 gcgtataaag cggcaggcgt ttgagcggct gccacaggcg gcaggagctt tcggtcttga
     9481 aggcaaaaaa caaccagaat gaggtggcac aggcaaccgc cgcgccgcgc gcgccgccgg
     9541 acggtacggc aagccccagc agcagcaggt ttgccgccag cgcgcccaag gtggcgagcg
     9601 cgatcgggcg tgtttttcgg acgacgttca aaccgatgcc gctgatttct accagcgtgc
     9661 aaaacagcgg cggcagcata cacgatacga cgataaaccg gacggcggcg tagttttccg
     9721 gcagcaggag ggaggcgagg ggcgagaaaa tgccggtcag gcagagggcg gaggcaagca
     9781 gggcggcggc ggattctgcc gttgccgaga ggcgggcggg cggggcgttt gcttcgattg
     9841 cgcggaaaat atacggtgtc cagaccgttg aaaagatgct ttggaacaat aatgccgccc
     9901 cgccgaacga aatacccatc gaataaacgc cgagctgttc taggccggca tattttttca
     9961 ggaacaaacg gtcggcggat gccagccccc aataggcgat gctgcttagt gcgatcggta
    10021 tgccgtagcg caggccgcga tgcaggacgg cggatgaaaa cggtgcgcgc cggacggcct
    10081 tcagacggca tcggttttga aacagcaaaa aggcggcggc ggcaaggttt gccagcgcgt
    10141 aaacggcggt caggacggcg gtgttcgccg gaaagtgcag cagcccgacc gtcagcggca
    10201 gcagcagcag gatggcgagc ttggacacga gttgcgcgga cgaaaaggca agggcgcgtc
    10261 cttccatacg caaaaccagt aagagaaagc ggatgggcag gaagctcagt tcaaacagca
    10321 ccagcccgat gccggcggcg gcatcgtcga gcgaaaacag gatttcagac ggcagggacg
    10381 ggcgggaaag cagcagggcg gctatcgcgg cggcagacag cagcggcggc aggaacaggg
    10441 ttttgaacaa agtgtctttg tcggcggcgg catagtattc gcggacgtat gcctgatcca
    10501 gcccgaggca caataccgac accgtcagtc ccgccgccgt ctgcatcagc acgatgcgcc
    10561 cgatgtcgtc ggcagggaaa taccacgaca gcagcggcag gatgatgacg gctaaaaccg
    10621 cgctgccgat cgagcctgcc gcgtagccga ggatttcttt tgtgtccatt tttgatgtcc
    10681 ggtcggcagc gggattctgc ctgtgtcgtc tgaagccttt cttgatcgga atttgacggc
    10741 tttcaggccg tcgcggctgc cggcggggtg cggcagtccg ggttgcgctt tttcgggtgg
    10801 gcggcggtct gaatggtgcc gttttttatc ggcgttatta tatagtgaaa tggcgcaaac
    10861 cctttaaaag gcgttgccgt tttttcggaa cacggttttg atgtcgtgtc cgaggatttc
    10921 gcttgaaaca ggtgtccaca agggcggtgc ggaaagggcg gcgcggtttt cgggcaggca
    10981 aaataaaccg ctgccgccgc cgaggatttt gggcgagcgg tataaaacga tttcgtccgc
    11041 caaatcttct gccaaaaatg cggatgtgag ttcggagcct gcttcgacca tgatttcgcc
    11101 gaaaccttcg tcggcaagga ggcgcatcag gtggtgcagg tcgattttgc cgtctgccgt
    11161 ttcagacggc atcaggatgc ggatgtgtgc gtgttcccga taggggcgga gtttatcttc
    11221 atcgcgttcc aaggtggcga tgtaggttgg agattgtccg tcggtcagaa ggtggctgtc
    11281 caagggcagg cgcaggcggc tgtctaaaac gatgcgtgcg ggttggcgca aagttggaaa
    11341 agcgcggacg ttgagccggg gattgtccgc caacaccgtg ccgatgccgg tcagcaccgc
    11401 gcagctttcg gcacgcaaaa cctgtacgtc ggcacgcgcg tcttcgccgg taatccaaaa
    11461 gctgctgccg tctgaaaggg cggttttgcc gtccagcgaa acggcgcatt tgaggcggac
    11521 gaaggggcgg cggcgttcga tgcgcgacag gaagcctcgg ttgagttccc ttgcctgatg
    11581 ttcgagtaaa ccgcattccg tcttgatgcc tgctgcttcg agcatggcaa gccctttgcc
    11641 ggcaaccagc gggttggggt cgcgcatggc ggcaacgacg cgtgttacgc cggaacggag
    11701 cagagcttcg gcgcagggcg gggtacgccc gtaatggctg cacggttcga gggtaacaaa
    11761 ggcggtcgcg ccttgtgcca tttcgcccgc ctgacgcagg gcgtggactt cggcatgggg
    11821 ttcgcccgct ttgacgtgga agccttgccc gacaatttgg ctgccgtgtg cgataacgca
    11881 gccgacgcgc ggattgggcg aagtggaaaa acgccccaaa gcggcaagtc ggagggcgtt
    11941 ttccatcatg gatatatctg tgtccgaaaa catagggata ccgtatcagt atgggttggg
    12001 ggaatcaggc tttgccgcct gttttgacgg cttgcgccag ccacgaggca aagtctgccg
    12061 gattgtcgaa gcgtttgtgc agggcggcga aacggacggc ggcttccgta tcttgtcgga
    12121 gcagttcttt tagcaccatg tcggcaagtg cggcagaggg gatgtcgcgc tgacccgaag
    12181 tgtagagcct gtgttccgtc aggcggacgg tttcgtcgat ctgttcgggt gtcagggcgg
    12241 attttcgggc ggcggcggtc aggtcgttgc ggaggcgttg tgcattaaag ggcgagcgtt
    12301 ttttgtccgg accgatgacg gcgggcattt tgagttcggc ggtttcgagc gtgccgaagc
    12361 gtttgccgca gttggggcag tggcggcggc ggcgcacggc gttgcgttct tccatcagac
    12421 gcgaatcggc gacgcgggtg tcggggtggg cgcaaaacgg gcatttcata gcgtttcttc
    12481 ctgatgccgt ctgaacgtca aaccgatacg ccggcggcgc gggcgatttc cagaccttct
    12541 tcggcactca tatagacggg gttttcggga cggtcgtgtc ggacgatgtt gccttcgcgg
    12601 aacatgacca gttcgttcac ggcaagttgg gaccatgatt cgtcgcgggt cagcggcagg
    12661 gtggcgataa cggcgacgcg gtcgttgggc gtggttactt cggcaaaatc gaccatcacg
    12721 tcgtcgtcga gcaggcgcgc cttgccgaac ggggcttggc ggacgatgta gtgcagtagt
    12781 gtgctggcgt gggcaaacag ggcaatgccg tctgaaagca taaagttaaa cagcccgaac
    12841 ttgcggattt cgtgcgtcag ccccgcaatc gcgtcaaaca gcgtgtcgtc gtcgggacgg
    12901 gcggcaaagc gggtgcgcag gcggttgagg atgtggcaga acgcgcgttc ggaatcggtt
    12961 gtgccgacgg ggtggaaaaa ttcgccctgt tcgggaaaaa aatcaatcaa atgtccgttg
    13021 tgggcaaaca gccagtagcc gccccacatt tcgcgcataa agggatgggt gttcgccagc
    13081 gaggtttgtc cttgtgatgc tttgcggata tgggcgacga cgttttccga tttaatctgg
    13141 taggcgcgca cgaggtcggc gacgggcgaa ttggcactgg gtttgtcgtc atggaacagg
    13201 cgcacgcctt tgccttcgaa aaagccgatg ccgaaaccgt cggcatggtg gtcggtaatg
    13261 ccgcccctgc ggcggaagcc ttcaaaggaa aacataatat cggtcggcgt attgcagttc
    13321 atgcccagca gttgacacat ggtttgtccc aatgattcag atggtcgcaa gtattcggat
    13381 tataccccga actgaaaatg ccgtctgaaa tacggcttgt tccccgttat tccctcgaaa
    13441 acagaaaaca gaaaacaaag acggaaactt aagattccgt cattcccgcg caggcgggaa
    13501 tccgacttgt ccggttttgg ttgtttttcg ttccgtaact tttgag
//
LOCUS       DAWKJW010000038        13378 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.038, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000038 DAWKJW010000000
VERSION     DAWKJW010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13378)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13378)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13378
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.038"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(100..528)
                     /locus_tag="WJJ54_000812"
     CDS             complement(100..528)
                     /locus_tag="WJJ54_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family phosphatase"
                     /protein_id="HEZ7341703.1"
                     /translation="MAILKLDEHLYISPQLTKADAEQIAQLGIKTVICNRPDREEESQ
                     PDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAESPVLAYCRTGTRCS
                     LLWGFRRAAEGMPVDEIIRRAQAAGVNLENFRERLDNARV"
     gene            complement(593..2341)
                     /locus_tag="WJJ54_000813"
     CDS             complement(593..2341)
                     /locus_tag="WJJ54_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HEZ7341704.1"
                     /translation="MIHYKITPSPLDHEWHILLTFTQDDDLPIEISLPNWVPGSYLIR
                     DFSRHITSIHASCNGTSMPLEQIAKNRWHAAAVRGEWQIRYTVYAFDLSVRGSFLTTE
                     RGFFDGSCLFLKVEGTETLPHRLELTGIPSEWRIATTLPETGRFVFQAASYAELIDRP
                     VEMGLIEFLDFEAAGIPHTIALSGIYPDFDRNRLVSDIKKICETELAVFSSPAPFQKY
                     LFLLHVGDHIYGGLEHTDSTALLADRHSLPPYGMTDADDTYTTLLGLFSHEYFHAWNV
                     KSIKPAAFVPYDLDKENYTEQLWAFEGITSYYDDLFLARSRTISPESYLNLLAQGITR
                     VQQTRGRLRQTLAESSFTAWNKFYKPDENSPNAIVSYYQKGALAALCLDLIIRNRSNG
                     RHSLDTLMDKLYREWRDTHSGIPEKHWQIRCQEITGLDLEDFFQKALYSTEDLPLAEC
                     LATAGVGLTFLPLPRQHGGGYAEHICPVPPAGDFGARFKQNTDHIVLTHVFNSGSAES
                     AALCPQDKIIALDGYACTDFTAQWARYHVNAKINIHFFRAGILRQTVLTVQAAAADTA
                     ILHITDRNLLDNWLFG"
     gene            2668..4101
                     /gene="ccoN"
                     /locus_tag="WJJ54_000814"
     CDS             2668..4101
                     /gene="ccoN"
                     /locus_tag="WJJ54_000814"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HEZ7341705.1"
                     /translation="MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPALDLS
                     NIGPWFHFGRLRPLHTNAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTFWGWQ
                     AVIVAAVVSFPMGWTQGKEYAELEWPIDILITLVWVAYAIVFFGTIAKRKIKHIYVAN
                     WFYGGFILAVALLHIVNNISIPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFL
                     GMMYYFVPKQAARPVYSYRLSVVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVLSL
                     ILFAPSWGGMINGIMTLSGAWDKLRTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNAL
                     SHYTDWTVAHVHAGALGWVGFVTIGSVYYMIPRLFGKEQMHSTKLVEAHFWIATIGVV
                     LYIAAMWIAGVMQGLMWSSLNDDGTLTYSFVESVKRTMPYYVIRFAGGLLYLSGMCIM
                     AYNVYRTAIGGKAVDAEIPAVSQTQHH"
     gene            4128..4739
                     /gene="ccoO"
                     /locus_tag="WJJ54_000815"
     CDS             4128..4739
                     /gene="ccoO"
                     /locus_tag="WJJ54_000815"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HEZ7341706.1"
                     /translation="MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAP
                     GVKPYNALQVAGRDIYIREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGS
                     KRTGPDLARVGGRYSDEWHRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKAL
                     RKVGTPYSDEEIAKAPEALANKSELDAVVAYLQGLGLALKNVR"
     gene            4744..4914
                     /locus_tag="WJJ54_000816"
     CDS             4744..4914
                     /locus_tag="WJJ54_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcoQ/FixQ family Cbb3-type cytochrome c oxidase
                     assembly chaperone"
                     /protein_id="HEZ7341707.1"
                     /translation="MDINGIRALFTVWIFICFLLVLYIVFNRRNKKNYDNAANSIFDE
                     NQDAQDKKSENR"
     gene            4938..6035
                     /gene="ccoP"
                     /locus_tag="WJJ54_000817"
     CDS             4938..6035
                     /gene="ccoP"
                     /locus_tag="WJJ54_000817"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HEZ7341708.1"
                     /translation="MNTTSQFTSNFWNIYIAVIVLLSFIALAWLLLSQNVVKRPKKGE
                     EVQTTGHEWDGIAEYDNPLPRWWFWLCVLTWLFGIGYLVMYPGVGDYKGLLKWTSHNQ
                     YEKEVKKADEQYGKLYAKFADMPIEKVAKDPQAKQIAQNLFNTYCIQCHGSDAKGSKG
                     FPNLTDSDWLWGGDPDKIHETIEKGRVATMPAWGPALGEEGVKDVAHYVMSLSKPEGQ
                     YDEERAARGQALFSGPPANCFTCHGDKGQGIQGLGPNLTDDVWLWGGTQKSIIETITN
                     GRSSQMPAWGHFLDKDKLHIMTAYVWGLSDKDGKAPVKKAEPAPTPAPAAEPAASAPA
                     EAAQAASEAKPAAAEPKAEEKAAPAAKADGK"
     gene            6075..6269
                     /locus_tag="WJJ54_000818"
     CDS             6075..6269
                     /locus_tag="WJJ54_000818"
                     /inference="COORDINATES: protein motif:HMM:NF024834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HEZ7341709.1"
                     /translation="MPGIPHVGIKADWADRIKKGKDTLHKHAIEGFNTMPAKGGRGDL
                     SDDEVKAAVDYMVNQSGGKF"
     gene            6471..7880
                     /locus_tag="WJJ54_000819"
     CDS             6471..7880
                     /locus_tag="WJJ54_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ7341710.1"
                     /translation="MDTQIKTEADNQSNRRYLTVWRWHFYAGLLVMPFLTLLAVTGLG
                     MLLFANITGKEGERIHVVPQATVQPLSVQAEAARSAVNPETSSVVQYIAPRADDMVAV
                     FRVNNEGKATMVAVDPYTAKVVNTMPRNQGWYHTMDEIHSDMMLGSTGDYLLETAASL
                     TIIMIISGLYLWWVKRRGIKAMLLPSKGRARSWWRNLHGTFGTWVSLILLLFCLSGIA
                     WAGIWGGKFVQAWSQFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWVLELTPMPVS
                     GTTVGKDGINPDEPMTLETVDRFAREIGFKGRYQLNLPKGEDGVWTLSQDSMSYDMIS
                     PFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGTLGWWSVLANVLFCLAV
                     IFIGISGCVMWWKRRPTGAVGIVPPAQKVKLPVWWMMALPLLAIALLFPTALLAIAVI
                     WLLDTLLLSRIPVLRRWFK"
     gene            7981..11190
                     /gene="recC"
                     /locus_tag="WJJ54_000820"
     CDS             7981..11190
                     /gene="recC"
                     /locus_tag="WJJ54_000820"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HEZ7341711.1"
                     /translation="MFYLYQSNRLETLAALFARIQKVKPLKSALQPEQIIVQSQGMRR
                     YLNTCLARDLGVAANLSFSLPAGLTWKLMKKLIPGIPELRPFAPEVMRWRLLDLFRSE
                     AFRNTAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRRLG
                     LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLAALDKDKLPERYFVFGISTMAPMYL
                     QLLHKLSEHCDVFVFALNPSGMYWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGR
                     DFFDFLNEMEIEGETPVFEEGGRDTLLHALQTDIQNLKMPSENVGSVNTGDGSIRIVS
                     AHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPHIESYTPFIEAVFGQAQPGAQAL
                     PYSVSDVKISRRQPLFHALSCLFDLLESRFEVDKVLVLLETAPVLRRFGLTEDDLPLL
                     HDMVADLNVRWGLDGEMRGGTDQLFTWKQAVERMILGWMLPEGGNPMWQDVSAWYADV
                     NQTALFGRFAALLETLSDIVRIWQQPATIGEWVARCRDLLETLFQAEADDQKSVQNLE
                     NEWVKWQAETELAQFSGQLPQQTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPF
                     KVICLLGLNDGDFPRNTKAAVFDLIAKHPAKGDRARRDDDRYLFLEALISAREILYLS
                     YIGRDIRKDEELAPSSLLGELIDTVAAMTGTNSRQLAQNLIEQHPLQAFSRRYFQEGG
                     RSDGIFGTRTDYAAALGQTPEPPQPFFDQPVENAEPVAEIGQDEFIRFWRNPVKVWLQ
                     QQLAWSEPHIGEAWEPAEPFEPQHADQIAETYIEARREGRDFAQTAARIGAESLLPSG
                     ELGRLWQQNFQTAAKQIDTAVLNSPKLPPLSYAIPSDGQILKGSLGNLYRCGQVFYAY
                     GKPNAPQRIAFLLEHLIFCAVMPSEAETRQTFIVQSGETEILAEIAQDRALQLLSEWM
                     AFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKAQTAYYGNKVSKGQKDYTEVA
                     LVFGNASQNPLEQPLFENLARLLADTLAAAEKREGAGAA"
     gene            complement(11260..12828)
                     /gene="mtrF"
                     /locus_tag="WJJ54_000821"
     CDS             complement(11260..12828)
                     /gene="mtrF"
                     /locus_tag="WJJ54_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041421321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family antimetabolite efflux transporter
                     MtrF"
                     /protein_id="HEZ7341712.1"
                     /translation="MSQTDTQRDGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAVG
                     AYFGLSVPDPRPVGAKGRADDGLIYVVSLLNADGLIKILTHTVKNFTGFAPLGTVLVS
                     LLGVGIAEKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAVI
                     FHSLGRHPLAGLAAAFAGVSGGYSANLFLGTIDPLLAGITQQAAQIIHPDYVVGPEAN
                     WFFMVASTFVIALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWA
                     GVVFVALSALLAWSIVPADGILRHPETGLVSGSPFLKSIVVFIFLLFALPGIVYGRVT
                     RSLRGEQEVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGATFLKEVG
                     LGGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDS
                     VTNIITPMMSYFGLIMATVIKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLG
                     LPVGPGAPTFYPAP"
     gene            13162..13374
                     /locus_tag="WJJ54_000822"
     CDS             13162..13374
                     /locus_tag="WJJ54_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341713.1"
                     /translation="MKNEIQKIMDKYDPWHEDDFESYEDIARDVSLMTDKTFIEHYLL
                     EVYSEENGHFDQENVHAMIEEIKNAI"
BASE COUNT         3355 a         3234 c         3543 g         3246 t
ORIGIN      
        1 actgtaaaaa cggagaagga cagaagacgg cagtaaggtt tgccgtcctc tttttcaagt
       61 tgcggtggaa tgccgcttga aggtgttttc ggcttgtaat cagacgcggg cgttgtccag
      121 ccgctctctg aagttttcca aatttacgcc tgccgcttgg gcgcggcgga tgatttcgtc
      181 aaccggcata ccttctgccg cccggcggaa gccccacagg agggagcagc gcgtaccggt
      241 ccggcaatag gcaaggacgg gagattcggc ttgtccgatg agttggcgga aggtttcgac
      301 atcgtgtttt tggatgtcgc gtgcggtaac gggttggtga tggaatccag taacgcctgc
      361 ttgttccagc cactgtttga tttgggcgaa gtcgggttgc gattcttctt cgcggtcggg
      421 gcggttgcag atgacggttt tgatgcccag ttgcgcgatt tgttccgcat cggctttggt
      481 cagttgcgga gaaatataga ggtgttcgtc aagtttcaga atggccattt tgtttccttt
      541 actttgcggt tgtttttcag acggcatttt gtgtgcaatg ccgtctgaaa gtttaaccga
      601 acaaccagtt gtccaacagg ttccggtctg tgatatgtag gatggcagta tccgctgccg
      661 ctgcctgaac cgtcaagacg gtttgacgca atatgccggc acggaagaag tggatattga
      721 tttttgcatt gacgtggtat cgggcccatt gtgcggtaaa gtcggtgcag gcataaccgt
      781 ctaaagcaat gattttgtct tgcgggcaca gtgccgcaga ttccgcgctg ccgctgttga
      841 agacatgggt caggacgatg tggtcggtgt tttgtttgaa acgtgcgcca aaatcgcctg
      901 ccggcgggac ggggcagatg tgttctgcgt atccgccgcc gtgttgtcgg ggaagtggca
      961 ggaaggtcag tcccacgcct gcggttgcca ggcattcggc aagcggcaaa tcttcggtac
     1021 tgtataacgc tttttggaaa aaatcttcca aatccaagcc ggtaatttcc tgacagcgga
     1081 tttgccagtg tttttccgga atacccgagt gtgtgtccct ccactcccga tagagtttgt
     1141 ccattaacgt atcgagagaa tgtctgccgt tgcttcggtt gcgtattatc agatcaaggc
     1201 acaatgcggc aagcgcgcct ttctggtagt agctgacgat ggcgttgggg ctgttttcat
     1261 ccggtttgta aaatttgttc cacgcggtaa aactcgattc cgccaaggtc tgcctcaaac
     1321 ggccgcgggt ttgttgtacg cgcgtaatgc cttgtgccag caggtttaaa taagattcgg
     1381 gcgagatggt gcggctgcgt gccaaaaaca aatcgtcgta ataggatgta ataccttcga
     1441 atgcccatag ttgttcggta tagttttctt tgtcgaggtc ataagggacg aacgcggcag
     1501 gtttgatgga tttgacgttc cacgcgtgaa aatattcgtg ggagaaaagt ccgagcaatg
     1561 tggtgtaggt atcgtcggca tcggtcatac cgtacggcgg aaggctgtgg cggtcggcga
     1621 gcagggcggt gctgtcggtg tgttccaaac cgccgtaaat atggtcgccg acgtggagca
     1681 ggaacaaata tttttgaaac ggggcagggg aggaaaacac cgccagttct gtttcgcaga
     1741 tttttttgat atccgaaacc agcctgttgc ggtcgaaatc gggatatatg ccgcttaagg
     1801 caattgtgtg cggaatgcct gccgcctcaa aatctaaaaa ttcaatcaag cccatctcga
     1861 caggtcggtc aatcaattcg gcataagatg ccgcctgaaa gacaaacctc cctgtttccg
     1921 gcagcgttgt ggcaatacgc cattcggacg gaatacccgt caattccaag cggtgcggca
     1981 gcgtttccgt tccttcgact ttcaaaaaca ggcacgatcc gtcaaaaaaa ccgcgttctg
     2041 tcgtcaggaa agaacctcga accgacaaat cgaatgcata tacggtgtag cggatttgcc
     2101 actcgccgcg tacggcggca gcgtgccagc ggttttttgc aatttgttcg agcggcatgg
     2161 acgtgccgtt acaggatgca tggatagaag tgatgtggcg ggaaaaatcc cgaatcagat
     2221 agctgcccgg aacccagttt ggcaggctta tttctatagg aagatcatca tcttgtgtga
     2281 atgtcagcag gatgtgccac tcgtggtcga gaggggacgg ggttatttta taatgaatca
     2341 taactatcaa atatatcgtt aaacgggatg gattaaatac ctttaaaatg cagcttaacc
     2401 tacatcaata aagtgccaca aaaagggaaa attggaaaca aaagcaatgg cggtcgggtt
     2461 gtaatttatt ataacaatat gatttatatg taataaaaaa cagattaagc aaagggctcg
     2521 ccggcggcgc gaatgtaatt ccgcttggcg taataaggca gatatgttaa atttagaaaa
     2581 aattacgctt gcccggattg caccttaaac aggctgcgga agcggcagga taaaaatctt
     2641 tattcccata aattcatgga gactctcatg gacacacaaa cttacaacta caaagtggtg
     2701 cgccagttcg ccatcatgac tgtagtttgg gggattgtgg gtatgttggt cggcgttatc
     2761 gtcgccgccc agctttttgc tcctgccctc gacttgtcta atatcggacc ttggttccac
     2821 ttcggccgcc tgcgtccgct gcacaccaat gcggttattt tcgcatttgg cggttgcggc
     2881 ctgatcggca catcatacta cgttgtccaa cgtacttgta atacccgtct tttcggcggt
     2941 tggctgccgg catttacctt ttggggctgg caggcggtaa tcgttgccgc cgtcgtcagc
     3001 ttccctatgg gttggactca aggtaaggaa tatgccgaac tggaatggcc gatcgatatt
     3061 ctgattactt tggtttgggt ggcttacgcc atcgtattct tcggtacgat tgccaaacgt
     3121 aagattaaac atatttacgt tgccaactgg ttctacggcg gctttatttt ggcggtcgca
     3181 cttttacaca tcgtcaacaa tatcagcatc ccggcagggt tgatgaagtc ataccccgtc
     3241 tattccggtg cgattgatgc tatggttcaa tggtggtacg ggcataacgc cgtgggcttc
     3301 ttcctgactg ccggcttctt gggtatgatg tactatttcg tacccaaaca agcagcccgc
     3361 cccgtttact cctaccgcct gtccgtcgtt cacttctggg cgttgatttt cacctatatg
     3421 tgggcgggtc cgcaccatct tcactacact gcgctgcctg actggacgca atctttgggt
     3481 atggttctgt ctttgattct gttcgcaccc tcttggggcg gtatgattaa cggcatcatg
     3541 accttgtccg gcgcgtggga caaactgcgt acagacccga ttcttaaatt cctgattgta
     3601 tccttgtcct tctacggtat gtctaccttt gaaggcccga tgatgtcgat taaaacggtc
     3661 aatgcattga gccactatac ggactggacc gtcgcgcacg ttcatgcggg tgcgttgggc
     3721 tgggtaggct ttgtaaccat cggttccgtc tattacatga ttccccgtct gttcggcaaa
     3781 gaacagatgc acagcaccaa gctggtagaa gcacattttt ggattgcgac catcggcgtg
     3841 gttctgtata tcgctgccat gtggattgcc ggtgtgatgc agggtttgat gtggagttct
     3901 ttgaacgatg acggtacgct gacctactcg tttgtcgaat ccgtaaaacg caccatgcct
     3961 tactacgtga tccgttttgc aggtggttta ttgtatctga gtggtatgtg cattatggcg
     4021 tacaacgtgt accgcacagc catcggtggt aaagcagtcg atgccgaaat ccctgcggtt
     4081 tcccaaacac agcaccacta aaatactaag aaagataggc taccaaaatg aaattacaac
     4141 aattggctga agaaaaaatc ggcgttctga ttgtgttcac gctgcttgta gtcagtgtcg
     4201 gtctgttgat tgaagttgtg cccttggcct ttaccaaggc ggcaacacag ccggcaccgg
     4261 gcgtgaagcc ttacaatgcc ttgcaggttg ccggacgcga tatttacatc cgtgagggct
     4321 gttacaactg ccactctcaa atgattcgtc cgttccgtgc ggaaaccgag cgttacggtc
     4381 attactctgt tgccggagag tcggtttacg accatccttt ccaatggggt tccaaacgta
     4441 ccggtcctga tttggcacgt gtaggcggcc gctattccga cgaatggcac cgtatccacc
     4501 tgctgaatcc ccgtgatgtc gtgcctgagt ccaatatgcc ggcattccca tggcttgcac
     4561 gcaataaagt cgatgtcgat gcaaccgttg ccaacatgaa ggctttgcgt aaagtaggta
     4621 ctccttacag tgatgaggaa attgcgaaag cgcctgaggc tttggcaaac aaatccgagc
     4681 tggatgctgt agtcgcctat ctgcaaggat tgggtctggc tttgaaaaac gtaaggtaac
     4741 atcatggata ttaacggtat tcgcgctctt ttcacggtat ggatctttat ctgtttcctg
     4801 ttggtactct atatcgtctt caacaggcgg aataagaaaa actacgataa tgccgcaaac
     4861 agcatttttg atgaaaacca agatgcgcaa gataagaaaa gcgaaaaccg ttaatattgt
     4921 gataacggag caaaacaatg aacacaacat cccaatttac cagtaatttc tggaatatat
     4981 atattgcagt tattgtctta ctgagcttta tcgctttggc ttggctgctg ctgtctcaaa
     5041 atgttgtcaa acgtccgaag aagggcgaag aagtacaaac tacgggtcat gagtgggacg
     5101 gcattgccga atacgacaat ccgctgcccc gctggtggtt ttggctgtgt gttttgacgt
     5161 ggctgttcgg tatcggttat ttggttatgt atccgggtgt cggcgactac aaaggtctgc
     5221 tgaaatggac cagccataac caatatgaaa aagaggtcaa aaaagccgat gagcaatacg
     5281 gcaaactgta tgccaagttt gcggatatgc cgattgaaaa agtggcaaaa gaccctcaag
     5341 ccaagcaaat cgcccaaaac ctgtttaaca cttattgtat ccagtgccac ggctctgatg
     5401 ctaaaggctc taaaggtttt ccgaatctga ccgatagcga ttggttgtgg ggcggtgatc
     5461 ccgataaaat ccacgagacc atcgaaaaag gccgtgttgc gactatgcct gcctggggtc
     5521 ctgctttggg cgaagaaggc gtgaaagacg ttgcccatta tgtgatgtcc ctttcaaaac
     5581 ccgaaggtca gtatgatgag gaacgtgccg cgcgcggaca agccttgttc agcggtccgc
     5641 ctgccaactg tttcacttgc cacggcgata agggacaagg tatccaaggt ttgggtccga
     5701 acctgactga tgacgtgtgg ttgtggggcg gtacgcaaaa atccattatc gaaaccatta
     5761 ccaacggtcg cagcagccaa atgcccgctt ggggacattt cttggataaa gacaaactgc
     5821 atattatgac tgcttatgta tggggtcttt ccgataaaga cggtaaagct ccggtgaaaa
     5881 aagccgagcc tgcaccgact cccgcaccgg cggcagaacc cgcagcctct gctcctgcag
     5941 aagcagcaca agccgcgtcc gaagccaaac ctgccgcagc agaacctaaa gccgaggaaa
     6001 aagctgcacc tgctgccaaa gcggacggca aataggttta tgaaaccgtt tgtgccgcct
     6061 gccatggcaa tgcgattccg ggtattcccc atgtaggcat caaagccgat tgggccgacc
     6121 gcatcaaaaa aggcaaggac acgttgcaca aacacgcgat cgaaggtttc aatacgatgc
     6181 ccgcaaaagg cggtcgcggc gatttgagcg atgatgaggt taaagctgcg gttgactata
     6241 tggtcaacca gtcaggcggc aaattctaac ttgactgagt ttccgatatt atcggttatg
     6301 aaaatccaga ttcagtattg aatctggatt ttttgtttta acgggcatcc ggttttaaac
     6361 gcagactgcc tatttgttgt aatgaatttt gactttagtc ataaagaatt agtctttatt
     6421 gtttataatc gcgcatcatc acgatagccc tattttcaaa aggacgatta atggatacac
     6481 aaatcaaaac tgaagccgac aatcagagca accggcgtta tctgaccgtt tggcggtggc
     6541 atttttatgc cggtctgctg gttatgcctt ttcttaccct gcttgccgtt acgggtttgg
     6601 gtatgctgct gtttgccaat attaccggta aggagggcga gcggattcat gttgtgccgc
     6661 aggcaacggt acaacctctg tctgttcagg cggaagcggc acgcagtgcc gttaatccgg
     6721 aaacttcgtc cgtcgttcag tatattgcgc cgcgtgccga tgatatggtt gccgtgttcc
     6781 gtgtcaacaa tgagggcaag gcaacgatgg tcgcggtcga tccttatacg gcaaaagtgg
     6841 tcaacaccat gccgcgcaat cagggttggt atcacacgat ggatgaaatc cacagcgata
     6901 tgatgctcgg ttcgacaggc gattatcttt tggaaacggc tgcatcgctg acgattatca
     6961 tgataatcag cggtttgtac ctttggtggg tgaaacggcg cggcatcaag gcgatgctgc
     7021 tgccgtcaaa aggcagggcg cgttcttggt ggcggaatct gcacggcacg tttggaactt
     7081 gggtgtcgtt gattttgctg ttgttctgcc tgtcgggtat tgcttgggcg ggtatttggg
     7141 gcggcaagtt cgtacaggct tggagtcagt tccctgccgg taaatggggt gtcgaaccga
     7201 accccgtttc agtcgtgccg acccacggcg aggtattgaa tgacggcaag gttaaggaag
     7261 tgccgtgggt tttggagctt acgcctatgc ctgtttcagg gacgactgtg ggcaaagacg
     7321 gcattaaccc tgacgagccg atgacattgg aaaccgtcga ccgctttgcg cgggaaatcg
     7381 gtttcaaagg gcgttatcag ttgaatttgc ccaaaggcga ggacggcgta tggactttgt
     7441 cgcaggattc tatgagttac gacatgatca gcccgtttgc cgaccgcacg gtacatatcg
     7501 accagtacag cggcaaaatc cttgccgaca tccgttttga cgattacaac ccgttcggca
     7561 aatttatggc ggcaagcatt gcgctgcata tggggactct gggctggtgg agcgtgttgg
     7621 cgaacgtctt gttctgcctt gccgtcattt ttatcggtat cagcggctgc gtgatgtggt
     7681 ggaaacgccg tccgaccgga gcggtgggca tcgttccgcc ggcgcagaaa gtcaagctgc
     7741 cggtttggtg gatgatggca ttgccgctat tggcaatcgc actgctcttc ccgaccgcac
     7801 tgcttgccat tgccgtgatt tggctgttgg atacgctgct gttgtcgcgg attcctgttt
     7861 tgaggagatg gtttaaatga ccaaatgccg tctgaaaggt tcagacggca ttttgtttga
     7921 aggcggacgg gggaaaggct atataatccc gaatactttt ccgcaacttt tgtcgaaatc
     7981 atgttttatc tgtatcaatc caaccgtctt gaaacgctgg cggcattgtt tgcccgcatt
     8041 caaaaagtca aaccgctgaa atcggcttta cagcccgaac agattattgt gcagagtcag
     8101 gggatgcgcc gctatctcaa tacctgcctc gcccgcgatt tgggcgtggc ggcgaatttg
     8161 tcgttcagcc tgcccgccgg cctgacgtgg aagctgatga aaaaactgat tcccggtatt
     8221 ccggaactcc gcccgtttgc acccgaagtc atgcgctggc ggctgctgga tttgttccgc
     8281 agtgaagcat tccggaatac ggcagaattt gaagatgtga ggaatgtgct gcaagactat
     8341 ctgggcagcg gcgaatcggc agattaccag cttgcgggac agcttgcgga catattcgac
     8401 caatacctcg tgtaccgtcc tcagtggata gacgcttggc agcagggcag gcggctcggt
     8461 ttgggcgacg acgaaatctg gcagtccaaa ctgtggcgtt acctcgacga tggcaggcag
     8521 agcgcgccgc accgtgtcgc gttgtgggaa aagctgcttg ccgcgttgga caaggataag
     8581 ctgcccgagc gttatttcgt gttcggcatt tccacgatgg cgccgatgta tcttcagctt
     8641 ttgcacaagc tgtccgaaca ttgcgatgtg ttcgtgttcg cactcaatcc gagcgggatg
     8701 tattggggca acgtcatcga agcggcgcaa atcctcaaag gcggcggcga tcccgattta
     8761 actcaggcag ggcatccgct gctcgcctca ttgggcaagc aggggcgcga ctttttcgac
     8821 tttttgaacg aaatggaaat agaaggagaa acgccggtat ttgaagaagg cgggcgcgat
     8881 acgcttttgc acgccctgca aaccgatatt caaaacctga aaatgccgtc tgaaaatgtg
     8941 ggaagcgtca acacgggcga cggctcgata cgcatcgtct ccgcacacag ccccttgcgc
     9001 gaattgcaga tactcaaaga caagctgttg aaaattctgc atgaacatcc cgattggcag
     9061 ccgcatgata tcgccgtatt aaccccgcac atcgaatcct atacgccttt tatcgaagcc
     9121 gtgttcggac aggcgcagcc cggtgcgcag gcattgccgt attccgtttc agacgtgaaa
     9181 atcagccgcc gacaaccgct gtttcatgct ttgtcatgcc tgttcgactt gttggaaagc
     9241 cgatttgaag tcgataaagt gcttgtgctt ttagaaaccg cacccgtgtt gcgccgtttc
     9301 ggactgactg aggacgattt gccgcttttg cacgacatgg ttgccgattt gaacgtccgc
     9361 tggggtttgg acggagaaat gcgcggcggc acggatcagc tgtttacctg gaagcaggcg
     9421 gtagaacgca tgatattggg ctggatgctg cccgaaggcg gcaatccgat gtggcaggat
     9481 gtcagcgcgt ggtatgccga cgtgaaccaa accgccctgt tcggacgttt tgccgccctc
     9541 ctcgaaaccc tgtcggatat tgtacggata tggcagcagc ccgcaacgat cggcgaatgg
     9601 gtggcgcgtt gccgggattt gcttgaaaca ttgttccaag ctgaagccga tgaccaaaag
     9661 tcagtccaaa accttgaaaa cgaatgggtc aaatggcagg cggaaacaga attggcgcaa
     9721 ttttccggac agttgccgca acaaaccgtc atccgccaca tccgccgctt tctcgacagc
     9781 gaaagcgagg caggcttttt acgcggcggc atcacctttt gcagtatggt gccgatgcgg
     9841 agcctgccct ttaaagtcat ctgtctgttg ggtttgaacg acggagattt tccccgcaat
     9901 accaaagccg ccgtattcga cctgattgcc aaacatcccg ccaaaggcga ccgcgcccgt
     9961 cgcgatgacg accgctacct gttccttgaa gctctcatca gcgcgcgtga aatcctgtat
    10021 ttgtcctaca tcgggcgcga tatccgcaaa gacgaagagc ttgccccgtc ttcgctgttg
    10081 ggcgaactca tcgataccgt tgccgccatg accggcacaa acagccgcca acttgcacaa
    10141 aacctgatag aacagcatcc gctgcaagcc ttctcgcgcc gatattttca agaaggcgga
    10201 cgttcagacg gcatattcgg cacgcgtacc gactacgccg ccgcgctcgg acaaacgccc
    10261 gaaccgccgc aacccttttt cgaccaaccc gtagaaaacg ccgaacctgt tgccgaaatc
    10321 ggacaggacg aatttatccg tttctggcgc aaccccgtca aagtatggct tcagcagcag
    10381 cttgcgtgga gcgaacccca tatcggcgaa gcctgggagc ctgccgaacc cttcgagccg
    10441 caacacgccg atcaaatcgc cgaaacctac atcgaagcac ggcgcgaagg acgggatttt
    10501 gcccaaaccg ccgcccgcat cggggcggaa agcctcctgc cgtcgggaga gttgggcaga
    10561 ctttggcagc agaacttcca aactgctgcc aaacaaatcg acacggcggt tttaaacagc
    10621 cccaaactgc caccgctttc atatgccata ccgtcggacg ggcaaatcct gaaaggcagc
    10681 ttgggcaatc tgtaccgctg cggacaagtg ttttacgcct acggcaaacc caacgcgccg
    10741 caacgtatcg cttttctgct ggaacacctg atattttgcg ccgttatgcc gtctgaagcc
    10801 gaaacgcggc aaacctttat cgtccaatcc ggagaaaccg aaatattggc ggaaatcgcg
    10861 caagacaggg cattgcagct attgtcggaa tggatggcgt ttttcaatat cgggcaaaac
    10921 cgcccgctgc cgttttttgc caagacctcg cttgccgctg ccgaagcgtt tgcccaaaaa
    10981 caagattggg aagccgccct gaaaaaagcc caaaccgcct attacggcaa caaagtcagc
    11041 aaagggcaga aagactatac cgaagtcgcc ctcgtgttcg gcaacgcaag ccaaaaccca
    11101 ctcgaacaac ccctgtttga aaacctcgcc cgcctgcttg ccgacacgct tgccgcagcg
    11161 gaaaaaaggg aaggggccgg agcagcctga cgggatggaa aggcaaatgc cgtctgaaaa
    11221 cagcaaaaag gttttcagac ggcattttgt ttatcgtgtt taaggtgcgg gatagaatgt
    11281 gggcgcgccg ggaccgacgg gcaggcccaa aacaaatacc caaatgcaga ataaggcaat
    11341 ccacgcaatc aagaagaaag cggaatacgg caacatcata gaaatcagcg tacccacgcc
    11401 cgcatctttt ttgtatttga tcaccgtcgc cataatcagc ccgaaataac tcatcatcgg
    11461 cgtaataata ttggtaacgg aatcaccgat gcggtaagcg gcttgaatga cttcgggcgc
    11521 gtagccggcc aacatcagca tagggacgaa aatcggcgca gttaccgccc attgcgcgga
    11581 ggcggagcct atcatcagat tgataaaagc acaaattaaa ataaaaccga taaacaacac
    11641 gctgccgccc aagccgactt cttttaagaa cgtcgcccct ttaacggcaa tatattgccc
    11701 aatattcgtc caattaaaaa atgcgacaaa ctgtgcggca aaaaagatga tgaccaaata
    11761 aagccccaga gtactcatcg attcggccat cgcattaacg acttcctgtt cgccgcgcaa
    11821 acttcgggtt acccggccat aaacaatgcc cggcagtgca aacaacaaga aaataaaaac
    11881 aacaattgat tttaaaaacg gcgaaccgga aaccaatcct gtttcaggat gacgcaaaat
    11941 accgtcggca gggacgatgc tccaagccaa tagggcggat aaggcaacaa acaccacgcc
    12001 agcccaaatt aatcctttat attccaaagg cgtgatttca ttggaatgtc gaatgtcttt
    12061 ttcttcttgt gacaaatctg attgataagg gcccaattgc ggttcgacga ttttttcagt
    12121 aacaaaataa ccaatcaaag caatcacaaa cgtactggct accataaaaa accagttggc
    12181 ttcagggcct acgacgtagt cgggatggat gatttgcgcc gcctgttggg tgatgcctgc
    12241 caagagcgga tcgattgtgc ctaagaacag attggccgaa taaccgcccg aaacgccggc
    12301 gaaagccgca gccaaaccgg caagcggatg gcggccgagc gaatgaaaga tgacggcgga
    12361 caaagggatt aggacgacat agcccaattc agaagcggta ttagataaaa tccctgtaaa
    12421 aacaaccata aaagtagtga gtttgcgtgg agattttgtg agcaataagc gcattaatgc
    12481 ggaaatcaag cccgattttt ccgcaatccc cacgcccaat aaagaaacca acaccgttcc
    12541 caacggcgcg aaaccggtga aatttttaac ggtatgcgtc aggattttga tcaaaccgtc
    12601 ggcattgagc aggctgacaa cgtaaatcaa accgtcatcg gcacgtcctt tcgcaccaac
    12661 agggcgcgga tcggggacgg atagtccgaa atacgcaccg acggcagagg caatcagcaa
    12721 taacacaatg aaaataataa aaagcgtaac cggatgcggc aacatattgc ccagccattc
    12781 gactgtgcgt aaaaatcgcc cgtcccgttg cgtatcggtt tgactcatct gcttctcctt
    12841 aaaaaaaata tattgagtgc attaaatttt tgaatgtaac atgaagtgtt ttgtaagcaa
    12901 actaaaataa tcgtatatgt atataaccgt aatagattaa aacagaaaat gcccacatcg
    12961 ttattctcat aaaggcggta atccgaaaac ttgacgttaa agccttatca ggaatgactg
    13021 gaactcaaaa aaacggattc ccgcctgcgc gggaatgacg ggattttcgg tttttgtttg
    13081 caagaatgcc ggagaagaat gcagtttaca ttttgaatgg tattgttatt aattgtaaat
    13141 aaatattgga aggtaaatga tatgaaaaat gaaattcaaa aaattatgga caaatatgat
    13201 ccctggcatg aagatgattt tgagtcgtat gaagacattg ccagagatgt atcgctgatg
    13261 acagataaaa cgttcattga acattatttg ttagaagttt attcagaaga aaacggacat
    13321 tttgaccaag agaatgtcca tgcaatgata gaagaaatta aaaatgcaat ttagtgaa
//
LOCUS       DAWKJW010000039        13279 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.039, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000039 DAWKJW010000000
VERSION     DAWKJW010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13279)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13279)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13279
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.039"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            304..583
                     /locus_tag="WJJ54_000823"
                     /pseudo
     CDS             304..583
                     /locus_tag="WJJ54_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246300.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            complement(672..1196)
                     /locus_tag="WJJ54_000824"
     CDS             complement(672..1196)
                     /locus_tag="WJJ54_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEZ7341714.1"
                     /translation="MQTRILSAVLLAFSTAAFAGGAFTLQFDNPSEDGGFTQNQLLSA
                     PYGFGCSGDNAPPALSWKNPPAGTKSFVLTVYDKDAPTGLGWMHWVVADIPADVRRRN
                     AASLQLSRCANIADDQPAAISAVISLRICRIRLTPSYTAKPMPSCCNHANTPQSAASA
                     TLCGTFSSASTAAA"
     gene            1507..2259
                     /locus_tag="WJJ54_000825"
     CDS             1507..2259
                     /locus_tag="WJJ54_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEZ7341715.1"
                     /translation="MITLPSLNNLPSKWDEIRYWLETRVCECGVMPHPNLTECEAGQF
                     ERDFWDNIGCAPEEYVRIRRAIRLLEASYPDSLNELVCAAIATPLGEMLAVFGSKGLC
                     LLEFVGQKHLEQEIAAVQKALRGRFVFREDERTQLLRQELDLYFKGRLKTFATPLEQI
                     GTEFQKQAWDALLAIPYGETRSYKEQAQRLGNPNAVRAVAAANGQNKVSILIPCHRVI
                     GSDGKLTGYAGGLNRKQFLLALERGEVQTALF"
     gene            2450..2525
                     /locus_tag="WJJ54_000826"
     tRNA            2450..2525
                     /locus_tag="WJJ54_000826"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2483..2485,aa:Asn,seq:gtt)
     gene            2656..3666
                     /gene="waaF"
                     /locus_tag="WJJ54_000827"
     CDS             2656..3666
                     /gene="waaF"
                     /locus_tag="WJJ54_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEZ7341716.1"
                     /translation="MSIKILIISPSWIGDCVMTQPLFRRLKELHPGCTIDVFAPKWSM
                     AVFERMPEVNEILENPFGHGALELKRRWRVGRDLGRRGYDQVIVLPGSLKSAVIALAT
                     GIAKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHPSQEDFDGHSGFPEFSID
                     ERRREISVETFGLNLGKPVLAFCPGAEFGPAKRWPTRHFAELGKHYLAAGWQVWLFGS
                     QKDDEIAEEINCLSDGMCVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKV
                     VAVYGSSSPTHTPPLSDRAKIVSLHLECSPCFKRECPLGHTDCLNRLYPEKIVQAVEE
                     AV"
     gene            3721..4167
                     /gene="smpB"
                     /locus_tag="WJJ54_000828"
     CDS             3721..4167
                     /gene="smpB"
                     /locus_tag="WJJ54_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEZ7341717.1"
                     /translation="MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESY
                     IYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVP
                     LDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR"
     gene            4533..6566
                     /locus_tag="WJJ54_000829"
     CDS             4533..6566
                     /locus_tag="WJJ54_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011272064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HEZ7341718.1"
                     /translation="MYYETRSKQKFKKIIYCKSIFSILYTSPLLAVDYVYDNSKLTNE
                     QIDRLKKLRDKSSEYWKQETYLLKPTNGSSQNSLKVPALYSKTHQFENINNSKKISFY
                     DKEYTEDYLVGFARGFGVEKRNGEEEKTLQQYFKDYVNTENSNNDKCKQPSLGSYAQM
                     LIKSDIFSLAPQIKNSHINSEILSVGNYIEWLRPTLNQLTSWQEQLYSGLDPFHYIDV
                     TDNSHVIGQTISLDEFRLENSLWEPRWDSDVGELKTTNADIRFNTKSESLLVKEDYAG
                     GARFRFAYGLKDKVPETPILTFEKNITGTSDIIFEGKALDNLKHLDGHQIIKVNGTAD
                     KHAFRLSGKHQKGIYTLSLQQRPEGFFTKVQERDDIAIYAQQAQAANTLFALRLNDKN
                     SDIFDRTLPRKGLWLRLISGHLSQDVQGKTAPVEGNRKGVQLGGEVFTWQNESNQLSI
                     GLMGGQAEQRSTFRNPDTDNLTTGNVKGFGAGVYATWHQLQDKQTGAYADSWMQYQRF
                     RHRINTEDATERFTSKGITASIEAGYNALLAEHVTKKGNSLRVYLQPQAQLTYLGVNG
                     KFSDSENAHVNLLGSRQLQSRVGVQAKAQFSLYKNIAIEPFAAVNALYHNKPFGVEMD
                     GERRVINNKTAIESQLGVAVKIKSHLTLQASFNRQTGKHHQAKQGALNLQWTF"
     gene            complement(6747..8114)
                     /locus_tag="WJJ54_000830"
     CDS             complement(6747..8114)
                     /locus_tag="WJJ54_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEZ7341719.1"
                     /translation="MPDLHTEFSRLLPADEIAELSPTLLKDQRNRFTSAPDIILQPRS
                     VESVQTIMRFCYEHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCIT
                     VEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLVIG
                     LEVVLPNGELVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAW
                     VGIPDIESAVRLLTETQAHFAERLCSFELIGRFAAELSSEFSKFPLPTHSEWHILLEL
                     TDSLPDSNLDDRLVEFLYKKGFTDSVLTQSEQERIHMWALRENISASQRKLGTSIKHD
                     IAIPIGRVADFVRRCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFLPEILSNEVYRYEN
                     DINDAVYRNVLACNGTIAAEHGIGIIKKQWLDKVRTPAEIALMKSIKQHLDPYNIMNP
                     GKLLP"
     gene            complement(8224..8520)
                     /locus_tag="WJJ54_000831"
     CDS             complement(8224..8520)
                     /locus_tag="WJJ54_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341720.1"
                     /translation="MKKSLFAAALLSLVLAACGGEKAAEAPAAEAPAAEAPATEAPAA
                     EAPAAEAPAAEAPATEAPAAEAPAAEAAATEAPAAEAAATEAPAAEAPAAEAAK"
     gene            8993..9475
                     /locus_tag="WJJ54_000832"
     CDS             8993..9475
                     /locus_tag="WJJ54_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ7341721.1"
                     /translation="MAIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLV
                     EEALHGKDAGDTVDVALSPDDAFGEQDPELVRIEDVGVFPVEVEVGMMFEADDPETGD
                     VVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGPHGHHHH
                     "
     gene            9562..10374
                     /gene="hpnC"
                     /locus_tag="WJJ54_000833"
     CDS             9562..10374
                     /gene="hpnC"
                     /locus_tag="WJJ54_000833"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HEZ7341722.1"
                     /translation="MSVGHYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMP
                     SEARLAGLEGLQRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDV
                     VKTRYAHFGELADYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVA
                     VDWQKGRVYIPQDDLLKFGVSEEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARE
                     LKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKKALWK"
     gene            complement(10447..10917)
                     /locus_tag="WJJ54_000834"
     CDS             complement(10447..10917)
                     /locus_tag="WJJ54_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HEZ7341723.1"
                     /translation="MYDVNTHDVRRFFARVWQQRLNPLQLSALEQKALRIIEAHPEYH
                     RYLERIEDHLDTDWLPENGESNPFLHMSLHLSVQEQAGIDQPHGIRAIHDTLCAKHGW
                     LEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAENQARLNPHEIA"
     gene            11008..12849
                     /locus_tag="WJJ54_000835"
     CDS             11008..12849
                     /locus_tag="WJJ54_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HEZ7341724.1"
                     /translation="MQTNYLSETDSIMKKLICLFAVFLMLCGRAFALDANDLLPPEKA
                     FVPELAVADDGVNVRFRIADGYYMYQAKIVGKTDPADLLGQPSFSKGEEKEDEFFGRQ
                     TVYHHEAQVAFPYAKAVGEPYKLVLTYQGCAEAGVCYPPVDTEFDISGNGTYHPQTDE
                     PASAKDRFLQPSSQNGSGALPPPKGDEGGDSRFKLSWDTLNANLLAFFLAGLGLSFTA
                     CMYPLLPIVSSIVVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQ
                     QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSA
                     LIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPKAGD
                     WMNAVKYAFGFILLAVAVYLATPHLPYYLVVALYTLLMLVPACMLLVNGRRQKRRPKA
                     VAFALGGILLIGGAWFGWQGANGKTTALHHFLTLNPPAEAGKSSEHGKMFADTAALKA
                     AMDTALKEHPDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDMERFFQIDVTANTP
                     EHQALLKEYGLFGPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQNR"
BASE COUNT         3248 a         2925 c         3719 g         3387 t
ORIGIN      
        1 acattgattt ttatgtagat ttttttattt aaacggcaat ccattccctc tttcgtggga
       61 gagggttagg gagagggcat cggggcggca acggaaatat tgcctgtatc tgccccgttt
      121 taccctctcc ccgaccctcc ccgacagggg aggggtcaag tttcaggcac gccgacggaa
      181 tatggttgaa acccggccat tcggggcggt gggattttgg tttatttttt gggaagtaac
      241 cctttccaaa tcagggtaaa cagggctgcg ccttatgtgc ggccctgcgt gttggagata
      301 atagtgccgt caaattactt tcatacgcgc gaacgattgg gtgctttggg cggcatcgtg
      361 caacatcata ccgccttgta ccgcagcgtg gcggtatatg aaccggctgt gcttatcgtg
      421 cggcgcggaa gcaagaagct gcggtgagcg aggcgcgaat tgaggattgc ggcgggtgag
      481 gcggttgcgt tggcaggcgg gcagacgttt gacgtcatca atattcccga ttcagacgac
      541 ctctatcagg cgcaatggat tgctttcgaa caggaagcca tagaaaggtt tgccgcacaa
      601 tacgggacgg cgcaggcagt gtgcgatgcg gtgaagctgc cgcatcccag gcagatgaac
      661 gcggcgtttg attatgcggc tgcggtgctg gcggatgaaa aagtgccgca caatgtggcg
      721 gaggccgcgc tttgcggcgt gttggcgtgg ttgcagcatg acggcatcgg ttttgccgtg
      781 tacgaaggcg tcaacctgat gcggcaaatc cgcaaactga ttactgccga tatggctgcg
      841 ggctggtcgt cggcgatgtt ggcgcagcgg cttaattgca gcgaggccgc gttgcggcgg
      901 cggacatcgg cgggaatgtc ggcgaccacc cagtgcatcc agcccagtcc ggtcggcgcg
      961 tctttatcgt aaacggtcag gacgaaactt tttgtcccgg cgggcggatt tttccacgac
     1021 agcgcgggcg gagcattgtc gcctgaacag ccgaagccgt aaggcgcact caaaagctgg
     1081 ttttgcgtga agccgccgtc ttcggacggg ttgtcgaatt gcagcgtgaa tgcgcccccg
     1141 gcaaaggcag cggttgaaaa agccagcagt acggcggaga ggatgcgggt ttgcatagat
     1201 gattcctttg cttgatgaat aagtggattc attataggct gtcaacggcg gcaggaatgt
     1261 gccgaaacgg ttggatgatg tgccggaatg cgtaaatgca aaaatcgtgg tttcagacga
     1321 ccctttgcag gtcgtctgaa gtctttaatt cctttccctg aggctttaga aatatcgcat
     1381 atttaggcat tgccgcaacc taaccctcaa gatttacgtc atagcccgtt cctgctccgg
     1441 cgtgcgggaa tggcaaaaat tggggatttt gccgccaaat ccatgataga gatacggagc
     1501 aaacgaatga ttaccctgcc ttccttaaac aatctgccgt caaaatggga tgaaatccgc
     1561 tattggctcg aaacccgggt ttgtgagtgc ggcgttatgc cgcatcccaa tttgacggaa
     1621 tgcgaagccg ggcagttcga gcgggatttt tgggacaata tcggctgtgc gcctgaagaa
     1681 tatgtccgta tccgccgcgc catccgtctg ctggaagcga gttatcccga cagtttgaac
     1741 gagctggtgt gtgccgccat tgccacgcct ttgggcgaga tgctggcggt gttcggcagt
     1801 aaaggcttgt gtctgctgga gtttgtcgga cagaagcatt tggaacagga aattgccgcc
     1861 gtccaaaaag ccttgcgcgg acggtttgtg tttcgggagg atgagcggac gcaacttttg
     1921 cggcaggaat tggacttata cttcaagggt cgtctgaaaa cctttgccac gcctttggag
     1981 cagattggca ccgagtttca aaagcaggca tgggacgcgc tcttggcgat tccttacggc
     2041 gaaacgcgca gctacaaaga gcaggcgcag cgtttgggca accccaacgc cgtccgcgcc
     2101 gttgccgccg ccaacgggca gaacaaggtg tctatcttga ttccctgcca ccgcgtcatc
     2161 ggcagcgacg gcaaactgac cggctacgcg ggagggttga accgcaaaca gtttttactg
     2221 gctttggaac gcggcgaagt tcagacggca ttgttttaag cgggggaggg cagaacggct
     2281 catcgggctt aaatatggtg tgatgacggc tgtggaaatt catacaacgg caatcctttt
     2341 aaggcatcgg tcttaatgtc tttctgattc atatgcttgt cgttttgtcg cccatttttc
     2401 caaaattaag gattgacaca ttttttccgg acgctataat acgccccatt ccccgatagc
     2461 tcagtcggta gagcgacgga ctgttaatcc gcaggtccct ggttcgagcc caggtcgggg
     2521 agccagaatt ttgaagcccg aacttgaatg ttcgggcttt ttcatatttg cacgtacggc
     2581 gttcggaatg agacaagata ggttttccaa cggtttcgcg gtaaaattct gcctgtctga
     2641 tttcggtttc ttgttatgtc catcaaaatc ctgattattt ctcccagttg gataggcgac
     2701 tgcgtgatga cccagccctt gttccgccgt ttgaaggaac ttcaccccgg ttgcacgatt
     2761 gatgtgttcg cgccgaagtg gtcgatggcg gtgttcgagc gtatgccgga agtgaatgaa
     2821 attcttgaga atccgttcgg acacggtgcg ttggagttga aacgccgctg gcgggtcggc
     2881 agggatttgg ggcggcgcgg atacgatcag gttatcgtgt tgcccggttc tttgaaatcg
     2941 gcagtcatcg cgctagcaac gggtattgcc aaaaggacgg gttatgtcgg tgaaagccgt
     3001 tattttctgt tgaacgatat acgcaggctg gataaggaac gtctgccttt gatggtggac
     3061 agatatacgg ctctcgcgca tccgagtcag gaagattttg acgggcattc gggattcccc
     3121 gagttttcca ttgatgaacg gcggcgggaa atttctgtcg aaactttcgg tttgaatctt
     3181 ggaaagcctg ttttggcatt ttgcccgggc gcggaattcg ggccggcaaa gcgttggccg
     3241 acaaggcatt ttgccgagtt gggcaaacat tatctggcgg cgggttggca ggtttggctg
     3301 ttcggttcgc aaaaagatga tgaaattgcc gaggaaatca actgcctttc agacggtatg
     3361 tgtgtcaatt tgtgcggcaa aaccgatttg tcgcaggcaa tggatttgct gtcgttggcg
     3421 gacacggttg tgtgcaacga cagcgggctg atgcacttgg cggcggcatt gggcaggaag
     3481 gtggtggcgg tttacggttc ttccagcccg acgcatacgc cgcctttgag cgacagggcg
     3541 aaaatcgtca gcctgcactt ggaatgttcg ccctgtttta agcgggaatg tccgctgggg
     3601 cataccgact gcctcaacag gctgtatccc gagaagattg tgcaggcggt tgaagaggcg
     3661 gtatgatggg ttctgttttc gggtttatgc cgtctgacgg cggatattga taggatgttt
     3721 atggctattg cgaacaataa aaaagcattt cacgattttt tcattgaaga ccggattgaa
     3781 gccggtttgg tcttggaagg ctgggaagtc aaagcaatcc gcgccgcgcg cgtacagctt
     3841 aaagagagtt atatctattg gaaaaaagac gcgttttatc tggtcggctg ccatattacg
     3901 gctttgccca cagcctcgac acacattaaa ccagatgccg tacgtccgcg caagctcttg
     3961 ttgaaccagt cggaaatcaa caaattaatc ggcaaaaccg aacgtgccgg ctacaccatc
     4021 gtgccgctgg atttgcattt ttcgcgcgga aaaatcaaga tggaaatcgg tttggcaaaa
     4081 ggtaagaaac agcacgacaa acgtcagagt atgaaagagg cggattggaa acgcgagaaa
     4141 cagcggttga ttaagcatac gcgctgattg tggaaacagt gcttcagagg gtatgggcaa
     4201 ggctgccgcc tgatgtgtaa acgttctaca cctaaaccag catccgcttt aatcagcaca
     4261 gcatgatgcc ccaaaccttc gtcaaaggtt tgagcaattt gatgataaat tggcattagc
     4321 caagggtaaa gtgcggtcat ttttcctgaa atttttgtaa ataacgaggg caattataca
     4381 cattttcaaa ctggcttgac aaaatagcaa aaagcaaacg tttaccttta ataaataaga
     4441 aataaataga gaaaaatgtg agctaaatga cattttttgt tcagttttat gctaaaatcc
     4501 acgccccatt tatttttact tgacaaagga aaatttatta tgaaactcga agcaagcaga
     4561 agtttaaaaa aatcatttat tgtaagtcta ttttttctat tctttatacc tctccgcttt
     4621 tggctgttga ttacgtttac gacaattcta aattaacaaa tgagcaaatt gatcgcttaa
     4681 aaaaacttag agataaaagc agcgaatact ggaaacaaga aacttatctt ctaaaaccga
     4741 cgaatggtag ctctcagaac tctctcaaag ttcccgcact atactctaaa acacaccaat
     4801 tcgaaaacat caacaactca aaaaagattt ctttttatga caaggaatac actgaagatt
     4861 accttgttgg cttcgcccga ggtttcgggg ttgaaaaaag aaatggggaa gaagaaaaaa
     4921 cactccagca atattttaag gactatgtaa atactgagaa ttccaataat gataagtgta
     4981 aacaaccatc cttaggaagc tatgcccaga tgctcataaa gagcgatatt ttctccttag
     5041 ctccacaaat aaaaaatagc catatcaaca gcgaaatttt atctgtaggt aattatatcg
     5101 aatggcttcg cccaacactt aatcagctta ctagttggca agagcagcta tattctggtt
     5161 tagatccatt ccactatatt gatgttacag acaactcaca cgttatcgga caaacaatta
     5221 gtttggatga attccgctta gaaaattctc tctgggaacc ccgttgggat tctgatgttg
     5281 gggaattaaa aacaacgaat gcagacatcc gttttaacac taaaagtgaa agtttactcg
     5341 taaaagaaga ttatgctggc ggagctcgtt ttcgttttgc ttacggtcta aaagataaag
     5401 tccctgaaac accaatttta acttttgaaa aaaatataac tggcacatca gatattattt
     5461 ttgagggaaa agcgttggat aatttaaaac acctagacgg gcatcaaatt atcaaagtaa
     5521 atggcacagc agataaacac gcattccgtc tttctggcaa acaccaaaag ggaatttata
     5581 cgctttcttt acaacaacgc ccagagggct tttttaccaa agtgcaagaa cgcgatgata
     5641 ttgcgattta tgcacaacag gctcaagccg ccaatacctt attcgccttg cgtttgaacg
     5701 acaaaaacag cgatattttt gaccgcactt taccacgcaa aggcttgtgg ttgcgtttaa
     5761 ttagtggtca cttaagccaa gatgtacaag gtaaaaccgc accagtagag ggaaatcgaa
     5821 aaggtgtgca actcggcggc gaagtattca catggcaaaa cgaaagtaat caactttcta
     5881 ttggcttaat gggcggacag gcagaacaac gcagtacttt ccgcaatcca gatacagaca
     5941 atcttacaac gggaaatgtg aaaggctttg gtgcaggcgt ttacgccact tggcatcagc
     6001 ttcaggacaa acagacaggt gcgtatgcgg atagctggat gcaatatcaa cgcttccgcc
     6061 accgtatcaa cactgaagat gctacagaac gttttacttc aaaaggtatt actgcctcaa
     6121 ttgaagcagg ttacaacgct ttattggcgg aacacgtaac taaaaagggc aacagccttc
     6181 gtgtttacct acaaccacag gcacaattga cttatttggg ggtaaacgga aaattcagcg
     6241 atagcgaaaa tgcccacgtg aatttacttg gctcccgcca attacaaagc cgagtgggcg
     6301 ttcaagctaa agcgcaattt tcactctata aaaatatcgc tattgaacct ttcgccgctg
     6361 tgaacgcgct ttaccacaac aaacctttcg gtgtggaaat ggacggagag cgtcgagtga
     6421 taaacaataa gacggcaatt gagagccaat taggtgtagc agtgaaaatc aaatctcact
     6481 taaccttaca agcctcattc aaccgccaaa caggcaaaca tcatcaggct aaacaaggtg
     6541 cgttgaattt gcagtggacg ttttaagtta agttgtaaca aaataaaatc ggcagggaaa
     6601 ttcactgccg atttttttat tttaaaaatg cggtcatttt tcgtgtcatt tccaccaatt
     6661 ttttaccgca ctcacgagct cgcgctaaac cgacaatcgg atctattgtc cctttctttg
     6721 ttgtgtatgc aaatcagaaa tgccggttac ggaagcagtt tgcccggatt cataatgtta
     6781 tatggatcaa ggtgttgttt gatgcttttc atcagggcga tttcggcagg cgtgcgtact
     6841 ttgtccagcc actgtttttt gatgatacct atgccgtgtt cggcggcaat cgtgccgttg
     6901 caggcaagaa cgttgcgata aactgcgtcg ttgatgtcgt tttcgtaacg atagacttca
     6961 ttgctgagga tttcgggcag gaaagtattg tagtgcaggc tgccgtcgcc aagatgtccg
     7021 aagcagacga tttgtatgcc tttaaaattc tgttccaaat ctttggcgca ccggcggaca
     7081 aagtcggcaa cgcgtccgat aggaatggca atatcgtgtt tgatgctggt gcccagtttg
     7141 cgttgcgatg cggagatgtt ttcgcgcaat gcccacatat ggatacgttc ttgttcgctt
     7201 tgtgtcaata cgctgtcggt aaatcctttt ttataaagaa attcgacaag ccgatcatca
     7261 agattgctgt cgggtaatga gtcggtcaac tcaagtaaaa tatgccattc tgaatgtgtc
     7321 ggcaggggga atttgctgaa ttcggaagac aactcggcgg caaaacggcc gatcagctca
     7381 aaactgcata ggcgttcggc aaagtgagct tgggtttcgg tcagcaggcg gacggcggat
     7441 tcgatgtcgg gtatgccgac ccatgccgtt gccttgtccg agggacgggc aaaaagcttg
     7501 agcgtggcgg cagtgatgat gcccagtgtg ccttcgctgc cgataaacag atggcgcagg
     7561 tcgtagccgg tggtgttttt atgcagggga tggagatggg aaaccagctc gccgttgggg
     7621 aggacgactt ccaaaccgat aaccaggtcg cgcatcgtgc cgtaacgcaa tacgttcaaa
     7681 cctccggcat tgcaggcgat gttgccgccg atttgacagg agccttcgct ggcgagactg
     7741 agtgggaaca gcctgtttga ggcttcggct gcctgttgga cggtttggag tacggaacct
     7801 gcttcgacgg ttatgcagtt gtctgacaaa ttgatgctgc ggatgcggtt gagtttggaa
     7861 aggttcagca atacgccgtt ttccgatact gccgcgccgc acaaaccggt attgccgcct
     7921 tgcggcgtaa ccggaatacg gtgttcgtaa caaaaacgca taatggtttg cacgctttca
     7981 acgctgcgcg gctgcaaaat gatgtctggt gcagacgtaa agcggttgcg ctggtctttt
     8041 aaaagcgtcg gagaaagttc ggcaatttca tctgccggca ggagtcggga aaattcggta
     8101 tgaaggtcag gcatgtttgt cggaagggta gggagaagat tgaggaaggg aatctgatgc
     8161 cgtctgaaaa atcaaaaaag caggatactg aacgtatcct gcttttttgc aagcggaaaa
     8221 tgcttatttt gcagcttcgg cagcaggagc ttcagcggca ggtgcttcgg tagcggcagc
     8281 ttcagcggca ggtgcttcgg tagcggcagc ttcagcagcg ggagcttcgg cggcaggtgc
     8341 ttcagtagca ggagcttcgg cggcaggtgc ttcagcagcg ggagcttcgg cggcaggtgc
     8401 ttcagtagcg ggagcttcgg cggcaggtgc ttcagcagcg ggagcttcag cggctttttc
     8461 accgccgcag gctgccagaa ccaaagacaa caaagcagcg gcaaacaggg attttttcat
     8521 tttagtaacc tttagaacca atttaaatta ttgaaacaaa taggtcttta tcgaccatac
     8581 tacaaaccgg gttggaaatt catcgctgaa tttgcgtaat tatgcactat ggaataaggg
     8641 attgcaatgt cgtacagatg ggaaaaaggt ttgaatgaaa agttttctgg cgggcggatt
     8701 gataaatcct gtaaaacggt tttgctgtta aaaattcgat agggataaat attatagaga
     8761 ttaatataat ttcagtatct tgtatgattt attaaggcgg attgggaaag tcggcagaca
     8821 ggtcggaatg gttttaagaa tgttgtaaaa aagttacacc gcaataaaat aacaaagatt
     8881 tacattgaaa tatgtgctgt acagtttatg aataggttaa cggtaatcgg ccggcgcggc
     8941 ggttgtgtta gaatgcgcct gtaattaatc tgctgttcct gaaaggacaa atatggctat
     9001 cgtgaaaaat tccgtggttt cgctgcatta tgagatgtat gatgccaaca atcagctttt
     9061 ggacaaaacc gaagaaccga ttgcgtatct gcacggcggt tacgacggca ttttcccttt
     9121 ggtggaagag gcgttgcacg gtaaggatgc cggcgatacg gtcgatgtgg cgctgtcgcc
     9181 cgacgatgcg ttcggcgagc aggatccgga gttggttcgt attgaagatg tgggcgtgtt
     9241 ccctgttgaa gtcgaagtcg gcatgatgtt tgaagccgac gatcctgaaa ccggcgatgt
     9301 tgtcgtctat cgtgtaaccg atgttgccga cggcaaggcg gtggtggacg gcaaccatcc
     9361 tttggcaggc atgaaaatcc gctttaaggc tacggttgaa agcgtgcgcg atgcatccga
     9421 tgaggaaatc gcacacggtc atgtccacgg cccgcacggt catcaccacc actgattgcc
     9481 ggcagcttgg aggtatctga tgccgtctga aaagggtttg ttccgtttca gacggcattt
     9541 tgtttgatgg atggagaagg tatgtcggtt gggcattatg agaattttcc cgtcggttcg
     9601 ctgattttgc cgcgcaggtt gaggaagccg gttcacgcgg tgtacgcgtt tgcacggacg
     9661 gcggacgata tggcggacga gggcagtatg ccgtctgaag ccaggttggc ggggttggag
     9721 ggtttgcagc gcgagttgga cgtgttggca tcgggcggcc ggtcggcgca tcctttgatt
     9781 gcacgattgg atgccgaggc ggttgtgccg ttcggtttgg atttgcagcc gttttatgat
     9841 ttgctttcgg cgttttcgca ggacgtggtt aaaacgcggt acgcgcattt cggcgaactg
     9901 gccgattact gccggcgttc cgccaaccct gtcggacgca ttatgctggc tttgtacggg
     9961 aaaacggatg cggtgtgcgt ggcgcaaagc gacggcatct gtacggcttt gcaactggtg
    10021 aatttttggc aggatgtggc tgtggattgg caaaagggca gggtttatat tccgcaggac
    10081 gatttgttga aattcggtgt ttctgaggaa cagatcgcgg caggacgggc ggatgcggcg
    10141 tttcagcggc tgatggcgta tgagtgccga cgcgcattcc gtatgctgaa ggcgggttcg
    10201 cctttggcaa gggaactgaa ggggcgtatc ggtttggaac tccgtatgat tgtgttgggg
    10261 gcgcagttga ttttgcagaa actggacgcg tgccgatacg atgtgtttgc acaacgcccc
    10321 gttttggata agaaggattg gttgattatg ctgaaaaagg cgttgtggaa atgattgggg
    10381 gaaaatgaat gccgtctgaa aggggttgtt ccgcttcaga cggcattttg caggcggttg
    10441 gtatggtcag gcgatttcat gcgggttcaa cctggcttga ttttctgcac ccaagccgat
    10501 gagtttgcgc agtcgggtca tgtagaaatt gacatccaaa ccggtgccgt agcgttgcgc
    10561 cgtccacagt gtttccgcca gtgcctccat catttcgtgt tcggcttcca gccagccgtg
    10621 tttggcgcac agggtgtcgt ggattgcgcg tatgccgtgc ggctggtcta tgcccgcctg
    10681 ttcttggacg gacagatgca gcgacatatg caggaagggg ttgctttcgc cgttttcggg
    10741 tagccagtcg gtgtccagat ggtcttcgat gcgttcgaga taacggtggt attcgggatg
    10801 ggcttcgata atgcggaggg ctttctgttc cagtgcgctc agttgcagcg gattgagccg
    10861 ctgctgccac acgcgggcga aaaagcggcg gacatcgtgg gtattgacat cgtacatggc
    10921 gggttcgata agatgtttat ggaaataggt tcggataatg gcgggtttta cataaattaa
    10981 atcccaccgt caaccttacc atttataatg cagacaaatt atttgtctga aacggattcg
    11041 attatgaaaa aactgatttg cctgttcgcc gtatttttga tgttgtgcgg acgagctttc
    11101 gcgctggatg cgaacgatct gctgccgccg gaaaaggcat tcgtgccgga gcttgccgtt
    11161 gccgacgacg gtgtgaacgt ccgtttcagg attgccgacg gatactatat gtatcaggcg
    11221 aaaatcgtcg gcaagaccga tccggcggat ttgttgggac agccttcttt cagcaagggc
    11281 gaagagaagg aagacgagtt tttcggcagg cagacggttt accatcacga agcgcaggtt
    11341 gcctttcctt atgcaaaggc tgtcggcgaa ccgtataaat tggttttgac ctatcagggc
    11401 tgtgccgaag ccggcgtgtg ctatccgccc gtggataccg agtttgatat ttccggcaac
    11461 ggcacttacc atccgcaaac cgacgaaccg gcatccgcca aagatcgctt tttgcagcct
    11521 tcctctcaaa acggcagcgg ggcgctgccg cccccgaagg gggatgaggg cggcgacagc
    11581 cgtttcaagc tgtcttggga tacgctcaac gccaatcttt tggcgttttt tctcgccggt
    11641 ttgggtctga gttttaccgc ctgtatgtat cccctgttgc cgattgtttc cagtattgtg
    11701 gtcggcgaca aaaaggcggg caaggcgcgg gcgtttgtgc tgtccgtcgt ttatgttcag
    11761 ggtttggctc tgacttatac gctggtcggc attgttgccg gactgacggg cgcgctgctg
    11821 accgtatggt tgcagcaggc ttgggtcgtg ttggcggcat cggctttgat ggtcgtcttg
    11881 gcactgtcta tgttcgggct gttcaacatc cagcttccca acgccgtgca gtcgtatttt
    11941 cagaatcaaa gcagcaggct ttcaggcggt aaaatcgttt ccgtctttat tatgggcata
    12001 ttgtccgcgc tgattgtcgg gccgtgcgtc gccccgccgc tggcatttgc tttgggctac
    12061 atcggtcaga cgggcgatgc ggttttaggc ggtttggcac tttacacttt ggcgttgggc
    12121 accggcgttc cgctgattgc catcggcacg ttcggcgggc atatcctgcc taaggcaggc
    12181 gattggatga atgccgtcaa atacgctttc ggctttatcc tgcttgccgt cgccgtttac
    12241 ctcgccacgc cgcacttgcc ctattatctc gtcgtcgcgc tgtacacgct gctgatgctg
    12301 gttcctgcct gtatgctgct ggtcaacgga cgcaggcaga aacgccgtcc gaaagctgtg
    12361 gcattcgcat tgggcggcat attgctgata ggcggcgcgt ggttcggctg gcagggcgca
    12421 aacggcaaaa cgaccgcgct gcaccatttc ctgaccctca atccgccggc cgaagcaggc
    12481 aaatcttcgg aacacggaaa aatgtttgcc gatactgccg cgctgaaggc agcgatggat
    12541 acggcgttga aagaacatcc cgacaaaccc gtcgttttgg atttttatgc cgactggtgc
    12601 atttcctgca aagaaatggc ggcttacacg cttaatcagc cggaagtgca tcaggcagtc
    12661 gatatggaac gctttttcca aatcgacgta accgccaaca cgcccgaaca tcaggcgttg
    12721 ttgaaagaat acggtctgtt cgggccgccg ggcgtgtttg tcgtccgctc cgacggcagc
    12781 cgcagcgagc cgctgctggg ttttgtcaaa gcagacaagt ttatcgagtg gtatgaacaa
    12841 aaccgctgat tccgatgttt caaatgccgt ctgaagttct cagacggcat ttttgtcaga
    12901 aaggaaaacg gcaatatccg ctatacacac ggaagcagtc caaagatgtg aaaaccgtgt
    12961 gtataagtta gtttgcgtat tgaaattaaa agataaaaat acgatgatta aaaaataggc
    13021 ataagaaaag ataaacacag ccggtgtttg ccggtgtgtg tatcttttgt ggaaaaacat
    13081 cttaatgtca tgtattttat ggaaaataat aacatgatta aaaaatagtc aatcattaag
    13141 gttcaggtag tcggctgcaa ccgtcaatgt ctgaaaagag gcagtgctgt ttaagcatgg
    13201 aaagtcggat atagtggatt aacaaaaatc aggacaaggc gacgaagccg cagacagtac
    13261 aaatagtacg gaaccgatt
//
LOCUS       DAWKJW010000040        13159 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.040, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000040 DAWKJW010000000
VERSION     DAWKJW010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13159)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13159)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13159
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.040"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            169..624
                     /locus_tag="WJJ54_000836"
     CDS             169..624
                     /locus_tag="WJJ54_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341725.1"
                     /translation="MKTDIQTELTQALLSHEKVWANEEKTILAKNILLDLVEKTDPTI
                     IGLLLNNDELKRHFFVEVNGVLVFKLQDLRFFLDKHSVNNSYTKYANRIGLTDGNRFL
                     KDNSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRSNSQPASQPANQPIIH"
     gene            527..2320
                     /locus_tag="WJJ54_000837"
     CDS             527..2320
                     /locus_tag="WJJ54_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ7341726.1"
                     /translation="MADKAPKKAKRFILNAVIASQPANQPTSQLYTKLTRKRQEIFFN
                     QTLAFDEIDRLFDAKAFSKFSRYTADGKQAVGEIKRHSDGTPAENLIIKGNNLIALHS
                     LAKQFKGKVKLIYIDPPYYFVKKKQQDSFGYNTNFKLSTWLTFMKNRLSIAKELLTDD
                     GIIVISIDDDGNAYLKILLDEIFGFENFIGNLPTIMNLKGNNDEYAFAGTHEYTLVFA
                     KNKDKSTFYEFPIDEDNFLEKWEEDEIGFYKKGAPMRATGTEDKREDRPEMFYPFLVK
                     NNTVSTITDEEFSQIYNKDLEVFNDDFIQKLKEKYENLGYNFILPIADKQWGRWRWGY
                     SIKNKARLQTDIIVSQSKNGISLYKKQRPELDDLPTKKPKTIFYKPEYSSGNGTEQMK
                     NLFGEKAFKNPKPEELIQDFITITTNESDIVLDHHLGSGTTAAVAHKMNRQYIGIEQM
                     DYIETLAVERLKKVIDGEQGGISKAVNWQGGGEFVYAELAPFNETAKQQILACEDSDG
                     IKTLFEGLCERYFLKYNVSVNEFSQIIQEPEFQSLALDEQKQMVLEMLDLNQMYVSLS
                     EMDDEQFAGCLNDDDKALSRAFYQTEKKDGE"
     gene            2310..5048
                     /locus_tag="WJJ54_000838"
     CDS             2310..5048
                     /locus_tag="WJJ54_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEZ7341727.1"
                     /translation="MANNKMLFEVIENRKAVYLEDGDDEKCRLPEFVERNLKYPFFEW
                     QKSALENFVIFDRTSKLKDFPDIKNRPTHLLFNMATGAGKTMMMAALILYYFEKGYRH
                     FLFFVNQNNIVDKTENNFIGSTHAKFLFTEKILQGDTVIPIRKVEMFSPHSDGIEIKF
                     TSIQKLYNDIHTERENQTTLADLHKLNLVMLGDEAHHLNAPTKSKKRDAEIEHKGWEH
                     MVLELLLNKNGNPSENVLLEFTATPPEKADVQQKYADKIITKFGLKEFLQKGYTKEIN
                     LVSSTLSKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKTVDESKADYLAFLNW
                     VENVQVDDFSFLKTFSTSLNDSDNANEQGKTRTEQALKFMQDNKFGFAHLANWVKQNY
                     QKHNIIITNSENNKTKTEKTDSETEKLLNNLEAADNPIRAIFTVGRLTEGWDVLNLFD
                     IVRLYEGQNGGGSNKKSCKTANTTVSEKQLIGRGVRYFPFAFEGKQPNKRKFDNDMQH
                     ELRILEELFYYAHDEQSRYISELKNELRKDGYLPEKDDDKVLATFKLKSEFAANKDFR
                     ELLIWANKKIPNPNAKSNNADSLKANPQTLSFQVHGNQLLQETQFTADENDETARQIG
                     TQNNFTQTIKMSEMERHIFNKALHIKGKNSQSLFHFNRLQSKLDIQNRNELQNNLLKD
                     WQIEFLGLGQDKQVRLDDKLAGCLKILEMVEKHLNESDMPFIGTKEFTPKKLWEIFGT
                     PKQKWVKKDDVKTTIATQNDWYVMNNFAGTGLEEALIQFISARLGDLKSKYDVHLIRN
                     EEVFKLNNFADGEGFMPDFILLLKDKQKSSSNGVNDFLHYQIFIEPKGEHLVETDGWK
                     EEFLEAITVEYGMDKILQKDTPHYRLIGLPFFTDHQKNGQFTESFPLGAASLEKMK"
     gene            complement(5192..6364)
                     /locus_tag="WJJ54_000839"
     CDS             complement(5192..6364)
                     /locus_tag="WJJ54_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HEZ7341728.1"
                     /translation="MKRDLSKMTCIEDLRRVAKRKMPRMFYDYIDSGSWTETTYRENT
                     SDFKDIRFRQKVLVNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGEILAARAAE
                     KFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLT
                     ADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKN
                     VGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALV
                     VSNHGGRQLDDTVSAIKALPDIVSAVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIG
                     RAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGHRDIQDVDASILRGKDWGRETV"
     gene            6654..7100
                     /gene="iscR"
                     /locus_tag="WJJ54_000840"
     CDS             6654..7100
                     /gene="iscR"
                     /locus_tag="WJJ54_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HEZ7341729.1"
                     /translation="MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
                     LFGKLRRAGLVESLRGPGGGYILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGA
                     PCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQFTHIH"
     gene            7129..8343
                     /locus_tag="WJJ54_000841"
     CDS             7129..8343
                     /locus_tag="WJJ54_000841"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HEZ7341730.1"
                     /translation="MTVKTPVYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHSFG
                     WEAEEAVEKARADIAALINADSKEIVFTSGATESNNLAIKGAAHFYKSKGNHLITVKT
                     EHKAVLDTMRELERQGYEVTYLDVQENGLVDLDVLKAAIREDTILVSVMWVNNEIGVV
                     QDIPAIGEICRERKIIFHVDAAQACGKVPVDVEAAKVDLLSMSGHKVYGPKGIGALYV
                     RRKPRVRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFRIAKEELEQDMAHYRKLRDI
                     FLKGIEGIEEVYVNGDLEHRAPNNLNVSFNFVEGESLIMAVKELAVSSGSACTSASLE
                     PSYVLRALGRNDELAHSSLRITFGRMTTEEEVQFAAELIKSKIGKLRELSPLWEMFKD
                     GIDLNSIEWAAH"
     gene            8603..8989
                     /gene="iscU"
                     /locus_tag="WJJ54_000842"
     CDS             8603..8989
                     /gene="iscU"
                     /locus_tag="WJJ54_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HEZ7341731.1"
                     /translation="MAYSDKVIDHYENPRNVGTFDKNDESVGTGMVGAPACGDVMRLQ
                     IKVNDEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPV
                     KIHCSILAEDAVKAAVADYRKRQENR"
     gene            9076..9396
                     /gene="iscA"
                     /locus_tag="WJJ54_000843"
     CDS             9076..9396
                     /gene="iscA"
                     /locus_tag="WJJ54_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HEZ7341732.1"
                     /translation="MITLTENAAKHINDYLAKRGKGLGVRLGVKTSGCSGMAYNLEFV
                     DEADGDDLIFEGHGARIYIDPKSLVYLDGTQVDYTKEGLQEGFKFENPNVKDSCGCGE
                     SFHV"
     gene            complement(9356..9577)
                     /locus_tag="WJJ54_000844"
     CDS             complement(9356..9577)
                     /locus_tag="WJJ54_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HEZ7341733.1"
                     /translation="MGGKVQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQE
                     AKKWRDGFDTVPPFLCLKHGSFRRSRRSL"
     gene            9659..10159
                     /gene="hscB"
                     /locus_tag="WJJ54_000845"
     CDS             9659..10159
                     /gene="hscB"
                     /locus_tag="WJJ54_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HEZ7341734.1"
                     /translation="MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFE
                     QKQAVMMSSTINDAYRTLKNPIDRAAYLLKKSGIDADAPEHTAFAPEFLMQQMEWRET
                     LMEARAGNDLESLKNLDNEIRDEQEKLLCGLKQSFARQDYDTAAQQVRQGRFLDKLRN
                     EISSAL"
     gene            10257..13007
                     /gene="gyrA"
                     /locus_tag="WJJ54_000846"
     CDS             10257..13007
                     /gene="gyrA"
                     /locus_tag="WJJ54_000846"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEZ7341735.1"
                     /translation="MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPD
                     VRDGLKPVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQ
                     NFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEETVNFGPNYDGS
                     EHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLSDTVNACLRLLDAPDTEIDELID
                     IIQAPDFPTGATIYGLSGVREGYKTGRGRVVMRGKTHIEPIGRNGEREAIVIDEIPYQ
                     VNKAKLVEKIGDLVREKTLEGISELRDESDKSGMRVVIELKRNENAEVVLNQLYKLTP
                     LQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGK
                     AVALSNIDEIIRLIKESPNAVEAKDKLLAHPWRSSLVEEMLTRSGLDLEMMRPEGLAA
                     NIGLKEQGYYLSEIQADAILRMSLRNLTGLDQEEIVESYKNLMGKIIDFVDILSKPER
                     ITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMVVTLTHGGYIKTQPTT
                     DYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCHWIKVYKLPEGGRN
                     SRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQLSAFKNVRAQGI
                     KAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISD
                     GIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQV
                     LTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGG
                     VLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESELSDASVISNVTEPEV
                     EN"
BASE COUNT         4030 a         3218 c         2871 g         3040 t
ORIGIN      
        1 cgcaaaattc cgacacactc ggacacccgc cccgcttatc gcaactttgc gaacgccccc
       61 ggaaacagca aagacatcaa aggattgatt ttattagaat ttatttgcaa agccatttgc
      121 cgttacacaa gaatggcaca ttaaaatgac tgatgaggat ttataacgat gaagacagac
      181 attcaaaccg aattaaccca agccctgcta tcacacgaaa aagtatgggc gaacgaagaa
      241 aaaaccattt tagccaaaaa cattctgttg gatttggtgg aaaaaaccga cccgaccatt
      301 atcggtttgt tattgaataa tgatgagtta aaacgccatt tctttgtgga agtgaatggt
      361 gttttggtgt ttaaattgca ggatttacgt tttttcttgg acaaacacag cgtcaataat
      421 tcctacacaa aatacgccaa ccgcattggt ttgacggacg gcaaccgctt tttgaaagac
      481 aattcggata ttgtgttgga ttttccgttt aaagattgcg tattgaatgg cggacaaagc
      541 accgaagaag gcgaagagat ttattttaaa cgcagtaata gccagccagc cagccaacca
      601 gccaaccagc caattataca ctaaattaac ccgaaaaaga caagaaatct tttttaatca
      661 aacgcttgct tttgatgaaa tcgatcggct ttttgacgca aaagcattct caaaattctc
      721 tcgctatacc gcagacggca aacaagcggt tggcgaaatc aaacgtcatt cagacggcac
      781 acccgccgaa aatctcatta tcaaaggcaa taatctgata gccctacatt cgcttgccaa
      841 acagtttaaa ggcaaagtga agttgattta tattgatccg ccttattatt ttgttaaaaa
      901 gaaacaacaa gatagttttg gttataacac taactttaaa ttatctactt ggcttacatt
      961 tatgaaaaat cgtttatcaa ttgccaaaga attattaact gatgatggga ttattgttat
     1021 ttccattgat gatgacggaa atgcttattt aaagattttg ttagatgaaa tttttggatt
     1081 tgaaaatttt atcggaaatt tacccactat tatgaattta aaaggtaata atgatgaata
     1141 tgcttttgca ggcactcacg aatacacact agtctttgct aaaaataaag ataaatctac
     1201 tttttatgaa tttccaatag atgaagataa ttttttagag aaatgggaag aagatgaaat
     1261 tgggttttat aaaaaaggag ctccaatgcg agcaacagga accgaagata aaagagaaga
     1321 tagacctgaa atgttctatc cttttttggt aaaaaataac acagttagta caattacaga
     1381 tgaagaattt tctcaaatct ataataaaga tttagaagta ttcaatgatg attttattca
     1441 aaaactaaaa gagaaatacg aaaatcttgg atacaatttt attttaccta ttgctgataa
     1501 acaatggggg cgttggcgtt gggggtattc aataaagaat aaggcaaggc tgcagacgga
     1561 tattattgtt agccaatcta aaaatggaat ttccttgtat aaaaaacaaa gacctgaatt
     1621 agatgattta cctacaaaaa aacctaaaac tattttttat aaacctgaat acagtagtgg
     1681 taatggaact gaacagatga aaaatctttt tggtgaaaag gcatttaaaa atcctaaacc
     1741 agaagaactt atccaagatt ttattaccat cacaaccaac gaatccgaca tcgtcttaga
     1801 ccaccatctt ggtagtggca caaccgccgc cgttgcccac aaaatgaacc gacaatatat
     1861 cggtattgaa caaatggatt atattgaaac gcttgccgtt gaacgcttga aaaaagtgat
     1921 tgatggcgag caaggcggta tttccaaagc cgtgaattgg caaggtggtg gcgagtttgt
     1981 ttatgccgaa cttgccccat ttaacgaaac cgcaaaacaa caaattttgg cttgcgaaga
     2041 ttcagacggc atcaaaacgc tgtttgaagg tttatgcgaa cgctatttct tgaaatacaa
     2101 cgtcagcgta aatgaattta gtcaaattat tcaagagcct gaatttcaat ccttggcatt
     2161 agacgaacaa aaacaaatgg tgcttgaaat gttggattta aatcaaatgt atgtttcatt
     2221 atccgaaatg gatgatgagc aatttgcagg ttgcttaaat gatgacgata aagcgttaag
     2281 ccgtgcgttc tatcaaacgg agaaaaaaga tggcgaataa taaaatgttg tttgaagtga
     2341 ttgaaaaccg caaagctgtg tatttggaag acggcgatga tgaaaaatgc aggctgcctg
     2401 aatttgtaga acgcaattta aaatatccgt tttttgaatg gcaaaaatcg gctttagaaa
     2461 actttgtgat ttttgaccgc acttcaaaat taaaggattt tcccgatatc aaaaaccgcc
     2521 ctacccattt gctgttcaat atggcaacag gtgcaggcaa aacgatgatg atggcggcgt
     2581 tgattttgta ttattttgaa aagggttatc ggcattttct gtttttcgtc aatcaaaaca
     2641 atatcgtaga taaaacggaa aataatttta ttggctcaac gcacgcaaaa tttttattta
     2701 ccgagaagat tttgcaaggt gatacggtaa ttcctattcg caaagtggaa atgtttagcc
     2761 cacattcaga cggcattgaa attaaattta ccagcattca aaaactatat aacgatattc
     2821 acaccgaacg ggaaaaccaa accacattgg cggatttgca taaattgaac cttgtgatgc
     2881 tgggcgatga agcgcaccat ttaaacgccc caactaaaag caaaaaacgc gatgccgaaa
     2941 ttgaacacaa aggctgggag catatggttt tggaattgtt actcaataaa aatggcaatc
     3001 ccagcgaaaa tgtgctgttg gaatttaccg ccacgccacc tgaaaaagct gacgtgcaac
     3061 aaaaatacgc tgataaaatc atcacaaaat ttggtttaaa agaatttttg caaaaaggtt
     3121 ataccaaaga aatcaatttg gtatccagta cactgagcaa gaaagagcgg gtgttgcacg
     3181 ctttattgtt tgcttggtat cgccatcaaa tcgctttgaa atatggcatt gccaatttca
     3241 aacctgtgat gttgtttaga agtaagacgg ttgatgaatc aaaagcggat tatttggcat
     3301 ttttaaattg ggtagaaaat gtgcaagtag atgatttttc gtttttaaag acattttcaa
     3361 caagtttaaa cgatagcgat aacgccaacg aacaaggcaa aacccgcacc gaacaagccc
     3421 taaaatttat gcaggacaat aaatttgggt ttgcacattt agcaaattgg gtaaaacaaa
     3481 attatcaaaa acacaatatc attattacca actccgaaaa caacaaaacc aaaaccgaaa
     3541 aaaccgacag cgaaacggaa aaattgctaa acaatctgga agcggctgat aatccaatcc
     3601 gtgccatttt tacggtgggt agattaaccg aaggttggga cgttttaaat ttgtttgata
     3661 ttgtgcgttt gtatgaaggg caaaacggcg gcggttcaaa taaaaaatca tgcaaaacgg
     3721 caaatacaac ggtatcagaa aaacagttga ttggtcgagg cgtgcgttat tttccatttg
     3781 cgtttgaagg taaacagccg aataaacgca aatttgacaa cgacatgcaa cacgaattgc
     3841 gtatcttgga agaattgttt tattacgcgc acgatgagca atcccgctat atttcagaac
     3901 tgaaaaatga gttgcgaaaa gacggttatt tgcctgaaaa agacgatgat aaggtattgg
     3961 caacatttaa actcaaatct gaatttgccg ctaataagga ttttagagaa ttgttaattt
     4021 gggcgaataa aaaaatcccc aacccaaacg ccaaaagcaa taatgcagac agcctaaaag
     4081 ccaatccaca aacgctttca ttccaagttc acggtaatca actgttgcag gaaacgcaat
     4141 ttacagccga tgaaaatgat gaaacagccc gacaaatcgg cacacaaaat aattttactc
     4201 aaaccataaa aatgagtgaa atggagcggc acattttcaa taaagcatta catatcaaag
     4261 ggaaaaatag tcaatcttta ttccatttca accgtttgca aagcaagctc gacattcaaa
     4321 atcgcaatga attgcaaaat aacttgttga aagactggca aattgaattt ttaggattag
     4381 ggcaagacaa acaggttcgc ctggacgata aacttgcagg ctgcctgaaa atcttggaaa
     4441 tggttgaaaa acatctgaat gaaagtgata tgccgtttat cggtacaaaa gaatttacac
     4501 ctaaaaaatt atgggaaatt ttcggcacgc caaaacaaaa atgggtcaaa aaagatgatg
     4561 taaaaacgac tattgccacg caaaatgatt ggtatgtgat gaataatttt gccggaacgg
     4621 gtttggaaga agcgttaatt caatttattt cagcgcgttt gggcgatttg aaatctaaat
     4681 atgacgttca tttaatccgt aatgaagaag tgtttaaatt gaataacttt gccgatggtg
     4741 aaggatttat gccggacttt attttattgc tgaaagataa acaaaaatct tcttccaatg
     4801 gtgtgaacga ctttttgcat taccaaattt tcattgagcc caaaggtgag catttagtgg
     4861 aaactgatgg atggaaagaa gaatttttag aagccatcac tgtggaatat gggatggata
     4921 agatcctgca aaaagataca ccgcattatc gtttgatcgg tttaccgttt tttactgatc
     4981 atcagaaaaa tggacaattt acggagtcat tccctttagg tgcggcatcg cttgaaaaaa
     5041 tgaagtagtg cattgcaggc aaccccgttt gacaaaactt cctttacaaa agggcgtttt
     5101 gtcagatatt taatcaacac attattaaaa tacagccaaa ttttaatgcc gtccgaaccc
     5161 tgtgttcaga cggcatcgta tttttcagta tctaaaccgt ttccctgccc caatctttgc
     5221 ctctcaaaat cgaagcatcg acatcttgaa tatcgcggtg tcccgtaaac gccatagata
     5281 tatccatttc tttatacagg atttccagcg cacgggttac gccttcttca ccatacgcac
     5341 ccaaaccata cagaaacgcc cgacctatca ttgtaccttt cgcacccaaa gcccacgcct
     5401 tcaaaatatc ctgaccgctg cggatgccgc tgtccatcca aacttcgatg tcgctgccga
     5461 ctgcactaac gatgtcgggc aaggctttga tggcggacac ggtatcgtcg agctggcggc
     5521 cgccgtggtt ggaaacgacc aatgcgtccg caccgctttt cgctgctttt tccgcatctt
     5581 caggttccat aatgcctttg ataatcagct tgccacccca caaatcttta atgcgtgcaa
     5641 cgtcgtccca gctcaggcgc gggtcgaatt gttcggaagt ccatgaagac agcgaggaca
     5701 aatcgccgac gtttttggcg tgtccaacga tattgcggaa cgtgcggcgt tccgtgttca
     5761 gcattttcat acaccattcg ggcttggtcg ccagattgat taaattggcg atggtcggtt
     5821 tcggcggcgc ggacaggccg tttttgatgt ctttgtggcg ttgccccaaa acctgcaaat
     5881 cagcggtcaa taccaatgcc gaacatttgg catccttcgc gcgcttaatc aggttttcca
     5941 taaactcgcg gtcgcgcatc acataaagct gaaaccaaaa tggtgcggaa gtgttctcgg
     6001 caacgtcttc aatcgagcag atagacatcg tggacagcgt aaacggaatg ccgaacttct
     6061 ccgccgcccg cgccgccaag atttcaccgt cggcgtgtgc cataccggta aaacccgtcg
     6121 gcgcaatcgc caccggcatt ttcacatcct gcccgatcat tttggtttcc aggcttcgac
     6181 cttccatatt gaccaatacc ttttgtcgga agcggatatc tttaaaatcc gaagtgtttt
     6241 cgcggtaggt agtttccgtc cacgaacccg aatcgatgta atcgtaaaac atacgcggca
     6301 ttttgcgctt ggcaacgcgg cgcaagtctt cgatgcaggt cattttgctc aaatcacgtt
     6361 tcatttgtcg ccccctgaat acctgaataa ctttatatga aatagataat gtatatcaat
     6421 attgattata aggcaaatca tttcaacatt tactgcaccc gccgccgctc ccacttcaag
     6481 cggcataagg tttagaattc aaaaataata tattaaaatc aaaatattaa aaatcaatca
     6541 atctgccgat ttaaacagcc aatcgcgcaa tccgccccca tacttgactg aaacactcag
     6601 atattggaca attccgccca ctataaaaaa agccgacacg ggcaaccacc accatgagac
     6661 tgaccaccaa agggcgtttc gccgttaccg ctatgctgga tttggcgatg aacgcgcaaa
     6721 ccggcgccgt caaactcagt gccatcagcg aacgccaaaa catatccctc tcctatctcg
     6781 agcaattgtt cggcaaactc cgccgcgccg gacttgttga aagcctgcgc gggcccggcg
     6841 gcggctacat cctcgccgca ccggcggcac gcatcaacat cgcccaaatc atcgccgccg
     6901 ccgaagaccg gctggacgca acccaatgcg gcagcaaagc caactgccac cacggcgcgc
     6961 cctgcctgac gcacgatctt tgggagaatt taaacaaaac catcaacgac tacctcggca
     7021 gcgttaccct gcaaagcatc atcgaacaga aaaacaacgg cgacggcagc cgcgtcgtcc
     7081 aatttacaca catccattaa ataacacccg aaaaagaaag agcaaaccat gaccgtcaaa
     7141 acccccgttt acctcgacta cgccgccacc acccccgttg acaaacgcgt tgccgaaaaa
     7201 atgattccct atctgaccga aaccttcggc aacccagcct ccaacagcca cagcttcggc
     7261 tgggaagcag aagaagctgt agaaaaagca cgtgcagaca ttgccgccct gattaacgcc
     7321 gactctaaag aaatcgtttt caccagcggc gcaaccgagt ccaacaacct cgctatcaaa
     7381 ggcgcggcgc acttctacaa atctaaaggt aatcacctca tcactgtaaa aaccgaacac
     7441 aaagccgtac tcgacaccat gcgcgaactc gaacgccaag gttacgaagt aacttatctg
     7501 gacgtacaag aaaacggttt ggttgattta gacgtactga aagccgccat ccgcgaagac
     7561 accatcctcg tttccgtaat gtgggtaaac aacgaaatcg gcgtggttca agatattcct
     7621 gccatcggcg aaatctgccg cgaacgcaaa atcattttcc acgttgacgc agcacaagca
     7681 tgcggcaaag tgcctgttga tgttgaagcc gcaaaagttg atttgctgtc tatgtccggc
     7741 cacaaagtat acggccctaa aggcatcggc gccctgtatg tacgccgtaa accacgtgtc
     7801 cgcctcgaag cccaaatgca cggcggcggt cacgaacgcg gcttccgcag cggcacattg
     7861 ccgacccacc aaatcgtcgg tatgggcgaa gccttccgca tcgccaaaga agaactcgaa
     7921 caagatatgg cgcactaccg caaactgcgc gacatcttcc tcaaaggcat cgaaggcatc
     7981 gaagaagtct atgtcaacgg cgacctcgaa caccgcgccc cgaacaacct gaacgtcagc
     8041 ttcaacttcg tcgaaggcga aagcctgatt atggcggtga aagaactcgc cgtatccagc
     8101 ggctccgcct gtacttctgc cagtctcgaa cccagctacg tcctgcgcgc gctcggccgc
     8161 aacgatgaac tggcgcactc atccctgcgc atcaccttcg gtcgcatgac caccgaagaa
     8221 gaagtgcaat tcgccgccga actgattaaa tccaaaatcg gcaaactgcg cgaactgtcg
     8281 ccgctgtggg aaatgttcaa agacgggatt gatttgaact cgattgaatg ggcagcgcat
     8341 taaagcgtac caacatgccg tccgaacctt tagacggcat tccaaaaaca aagcaatcaa
     8401 gagaaaatat gaacgaacaa gatttagatt tggacaatct cgacaacctg cttgaagatt
     8461 ttgacggcgt taccgtggaa ggcggcgtcg attcggaaaa cgacgacggc tgtgaaggcg
     8521 gcgcgtgcaa aatctaactc aggccgtctg aaaaccggca aacaaaccac ttaaatcatc
     8581 aaaacattaa ggaaaccaca tcatggcata cagcgataaa gtaatcgacc actacgaaaa
     8641 tccccgcaac gtcggtactt tcgacaaaaa cgacgaatct gtcggcaccg gcatggtcgg
     8701 cgcaccggcc tgcggcgacg tgatgcgcct gcaaatcaaa gtgaacgatg aaggcatcat
     8761 cgaagatgcg aaattcaaaa cttacggctg cggttccgcc atcgcttcgt ccagcctgat
     8821 taccgagtgg gtcaaaggca aaagcctgga tgacgcgctg gcaatcaaaa acagcgaaat
     8881 cgccgaagag ttggaattgc cgccggtaaa aatccactgc tccatcttgg ctgaagatgc
     8941 ggtaaaagcg gccgttgccg actaccgcaa acgtcaggaa aacagataaa gcccttcaga
     9001 cggcatcgtc ccgcaatgcc gtccgaacca cccgccgctt caggtccgtc cggggcggta
     9061 caacaaggaa gaaatatgat tacccttacc gagaatgccg caaaacacat caatgactat
     9121 ctcgccaaac gcggcaaagg cttgggcgta cgcttgggtg tgaaaaccag cggctgctcg
     9181 gggatggcgt acaaccttga atttgtcgat gaagccgacg gcgacgacct gattttcgaa
     9241 ggacacggcg cacgcattta tatcgacccg aaaagcctgg tttatctgga cggcacacaa
     9301 gtcgattaca ccaaagaagg tttgcaggaa ggtttcaaat ttgaaaaccc caatgtcaaa
     9361 gactcctgcg gctgcggcga aagcttccat gtttaagaca taaaaatggc gggaccgtat
     9421 caaaaccgtc ccgccatttt ttcgcttcct gcctgttgta gctgcctttg cctttccttt
     9481 tccgttccac cttgtgccgg aacaaatcgg atttcactaa ggcttttaaa gcattgtcgc
     9541 gtattttgcc tttattgtgc tgcactttgc cgcccatatt cagtcctttc gtttaagaag
     9601 ctgcagatta taaggcaaaa acagttttct gccaaaatct tacatttatc atcctactat
     9661 gtcccaatat ttcaccctct tccggattga acccgctttc gatatcgaca ccgaaaactt
     9721 ggaacaaacc taccgcgcct tggccgcccg tttccatccc gataaattcg cttcagcttc
     9781 cgcctttgag caaaagcagg cagtgatgat gtcttccacc atcaacgatg cctaccgcac
     9841 cttgaaaaac cccatcgacc gcgccgccta cctgctgaaa aaatcgggca tcgatgccga
     9901 cgcgccggag cataccgctt tcgcccccga attccttatg cagcaaatgg aatggcgcga
     9961 aacgctgatg gaggcacggg caggcaacga ccttgaatcc ttgaaaaatc tcgacaacga
    10021 aatccgcgac gaacaagaaa aactgctctg cggtctgaaa cagtcgtttg cccgacaaga
    10081 ttacgacaca gccgcacaac aagtccgcca aggcaggttt ctcgacaaac tccgcaacga
    10141 aatttcctcg gcattataat ccgcaccgtg tttcagacgg cgtaaccgcc gcaccgttcc
    10201 gcgtcaaaat atgctaaaat aagcaacaat tttttgccat acgaaacatt gaaaccatga
    10261 ccgacgcaac catccgccac gaccacaaat tcgccctcga aaccctgccg gtaagccttg
    10321 aagacgaaat gcgcaaaagc tatctcgact acgccatgag cgtcattgtc gggcgcgcgc
    10381 tgccggacgt tcgcgacggt ctcaagccgg tacaccgccg cgtactgtac gcgatgcacg
    10441 aattgaaaaa caactggaat gccgcctaca aaaaatcggc gcgcattgtc ggcgacgtca
    10501 tcggtaaata ccacccccac ggcgataccg ccgtatacga caccatcgtc cgtatggcgc
    10561 aaaatttcgc tatgcgttat gtgctgatag acggacaggg caacttcgga tcggtggacg
    10621 ggcttgccgc cgcagccatg cgctacaccg aaatccgcat ggcgaaaatt tcccacgaaa
    10681 tgctggcaga cattgaggaa gaaaccgtca atttcggccc gaactacgac ggtagcgaac
    10741 acgagccgct tgtactgccg acccgtttcc ccacactgct cgtcaacggc tcgtccggca
    10801 tcgccgtcgg catggcgacc aatatcccgc cgcacaacct ttccgatacc gtcaatgcct
    10861 gcctgcgcct gctcgatgca cccgacaccg aaatcgacga actgatcgac attatccaag
    10921 cccccgactt cccgaccggg gcaaccatct acggcttgag cggcgtgcgc gaaggctata
    10981 aaacaggccg cggccgcgtc gttatgcgcg gtaagaccca tatcgaaccc ataggcagaa
    11041 acggcgaacg cgaagccatc gttatcgacg aaatccccta tcaggtcaac aaagccaagc
    11101 tggtcgagaa aatcggcgat ttggttcggg aaaaaacact ggaaggcatt tccgagctcc
    11161 gcgacgaatc cgacaaatcc ggtatgcgcg tcgttatcga gctgaaacgc aacgaaaatg
    11221 ccgaagtcgt cttaaaccaa ctctacaaac tgactccgct gcaagacagt ttcggcatca
    11281 atatggtggt tttggtcgac ggacaaccgc gcctgttgaa cctgaaacag attctctccg
    11341 aattcctgcg ccaccgccgc gaagtcgtta cccgacgtac gcttttccgg ctgaagaagg
    11401 cacgccatga agggcatatc gccgaaggca aagcggtcgc actgtccaat atcgatgaaa
    11461 tcatccggct tatcaaagaa tcgcccaacg cggtcgaggc caaagacaaa ctgcttgcgc
    11521 acccttggcg cagcagcctc gttgaagaaa tgctgacgcg ttccggtctg gatttggaaa
    11581 tgatgcgtcc ggaaggattg gctgcaaaca tcggcttgaa agagcaaggt tattacctga
    11641 gcgagattca ggcagatgct attttacgca tgagcctgcg aaacctgacc ggcctcgatc
    11701 aagaagaaat tgtcgaaagc tacaaaaacc tgatgggtaa aatcatcgac tttgtggaca
    11761 tcctctccaa acccgaacgc attacccaaa tcatccgcga cgaactggaa gaaatcaaaa
    11821 ccaactatgg cgacgaacgc cgcagcgaaa tcaacccgtt cggcggcgac attgccgatg
    11881 aagacctgat tccgcaacgc gaaatggtcg ttaccctgac acatggcggc tatatcaaaa
    11941 cccagccgac caccgactat caggcgcagc gtcgcggcgg gcgcggcaaa caggcggctg
    12001 ccaccaaaga cgaagacttt atcgaaaccc tgtttgttgc caacacgcat gattatttga
    12061 tgtgctttac caatttgggc aagtgtcatt ggattaaggt ttacaaactg cccgaaggcg
    12121 gacgcaacag ccgcggccgt ccgattaaca acgtcatcca gttggaagaa ggcgaaaaag
    12181 tcagcgcgat tctggcagta cgcgagttcc ccgaagacca atacgtcttc ttcgccaccg
    12241 cgcagggaat ggtgaaaaaa gtccaacttt ccgcctttaa aaacgtccgc gcccaaggca
    12301 ttaaagccat cgcgctcaaa gaaggcgact acctcgtcgg cgctgcgcaa acaggcggtg
    12361 cggacgacat catgctgttc tccaacttag gtaaagccat ccgcttcaac gaatactggg
    12421 aaaaatccgg caacgacgaa gcggaagatg ccgacatcga aaccgaaatt tcagacggca
    12481 tcgaagatga aaccgccgac agcgaaaacg cactgccgag cggcaaacac ggtgttcgcc
    12541 cgtccggtcg cggcagcggc ggtttgcgcg gtatgcgcct gcctgccgac ggcaaaatcg
    12601 tcagcctgat taccttcgcc cctgaaaccg aagaaagcgg tttgcaagtt ttaaccgcca
    12661 ccgccaacgg atacggaaaa cgcaccccga ttgccgatta cagccgcaaa aacaaaggcg
    12721 ggcaaggcaa tattgccatt aacaccggcg agcgaaacgg cgatttggtc gccgcaacct
    12781 tggtcggcga aaccgacgat ttgatgctga ttaccagcgg cggcgtactt atccgcacca
    12841 aagtcgaaca aatccgcgaa accggccgcg ccgcagcagg cgtgaaactg attaacttgg
    12901 acgaaggcga aaccttggta tcgctggaac gtgttgccga agacgaatcc gaactctccg
    12961 acgcttctgt aatttccaat gtaaccgaac cggaagtcga gaactgaaaa tcatctcccg
    13021 atgccgtctg aagattcaga cggcatttat tttatccctc atccgtcatc cagcttctca
    13081 caatatagcg gattatagtc aattaaaaac aaggggctgt cctagataac tagggaaatt
    13141 caaattaagt tagagttgc
//
LOCUS       DAWKJW010000041        13139 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.041, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000041 DAWKJW010000000
VERSION     DAWKJW010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13139)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13139)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13139
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.041"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     regulatory      77..121
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            125..598
                     /gene="queF"
                     /locus_tag="WJJ54_000847"
     CDS             125..598
                     /gene="queF"
                     /locus_tag="WJJ54_000847"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HEZ7341736.1"
                     /translation="MSRNTEELQGISLLGNQKTRYPTGYAPEILEAFDNKHPDNDYFV
                     KFVCPEFTSLCPMTGQPDFATIYIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNI
                     IMKDLIALMDPKYIEVFGEFTPRGGIAIHPFANYGKAGTEFEALARKRLFEHDAQ"
     gene            673..1359
                     /locus_tag="WJJ54_000848"
     CDS             673..1359
                     /locus_tag="WJJ54_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HEZ7341737.1"
                     /translation="MYAFTDAQQQKALFWLVLFHILIIAASNYLVQFPFQIFGIHTTW
                     GAFSFPFIFLATDLTVRIFGSHLARRIIFWVMFPALLLSYVFSVLFHNGSWTGLGALS
                     EFNTFVGRIALASFAAYALGQILDIFVFNKLRRLKAWWIAPTASTVIGNALDTLVFFA
                     VAFYASSDEFMAANWQGIALVDYLFKLTVCGLFFLPAYGVILNLLTKKLTTLQTKQAQ
                     DRPAPSLQNP"
     gene            complement(1708..3000)
                     /locus_tag="WJJ54_000849"
     CDS             complement(1708..3000)
                     /locus_tag="WJJ54_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEZ7341738.1"
                     /translation="MAVFPLSAKHRKYALRALAVSIILVSAAYIASTERTERVRPQRV
                     EQNLPPLSWGGSGVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLR
                     HLRADQSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTL
                     RSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLIYDSLYFHGQQ
                     VAAGDILAAEVVKGGTRHQAFYYRSDKEGGGGGNYYDEDGRVLQEKGGFNIEPLVYTR
                     ISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHA
                     NGVETLYAHLSAFSQAQGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVAL
                     PTPELTQADKAAFAAQKQKADALLARLRGIPVTVSQSD"
     gene            3078..4043
                     /locus_tag="WJJ54_000850"
     CDS             3078..4043
                     /locus_tag="WJJ54_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341739.1"
                     /translation="MKLTLALPSLNLDEDEIRIPLCLHAFNKILQYGSPYRQSCTASA
                     FYARYLWCGRLAERAAQSLNMPSEAVALATPVWQKMGLHQANVLTAEYLNVGTDEAER
                     LCRDLSEFYADTPWHFTPVLPELWLVSLPRAYRWGAKPVLDLGGLLGADDQPDGKDSL
                     EWLRVQTEIQMWLAAHPVNHNRKKRGLPELNGLWLWDSLHGSSQGGTLFADTVWSRFH
                     PDRRALPDNFRAYEETAAHLPDTHHILFMDDLRLTALTGDRERYASVLQQWEEHWFAP
                     IYEAVRTGKIKRLDITTDGQHGGTLTFKPADRWKFWRGAKTFDGI"
     gene            complement(4247..5713)
                     /locus_tag="WJJ54_000851"
     CDS             complement(4247..5713)
                     /locus_tag="WJJ54_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ7341740.1"
                     /translation="MVIFYFCGKTFMPARNRWMLLLPLLASAAYAEETPREPDLRSRP
                     EFRLHEAEVKPIDREKVPGQVREKGKVLQIDGETLLKNPELLSRAMYSAVVSNNIAGI
                     RVILPIYLQQAQQDKMLALYAQGILAQTDGRVKEAISHYRELIAAQPDAPAVRMRLAA
                     ALFDNRQNEAAADQFDRLKAENLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNI
                     NQAPKRQQYGKWTFPKQVDGTAVNYRLGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKF
                     NDMTAGVSGGIGFADRRKDAGLAVFHERRTYGNDAYSYTNGARLYFNRWQTPKWQTLS
                     SAEWGRLKNTRRARSDNTHLQISNSLVFYRNARQYWMGGLDFYRERNPADRGDNFNRY
                     GLRFAWGQEWGGSGLSSLLRLGAAKRHYEKPGFFSGFKGERRRDKELNTSLSLWHRAL
                     HFKGITPRLTLSHRETRSNDVFNEYEKNRAFVEFNKTF"
     gene            complement(5955..8069)
                     /locus_tag="WJJ54_000852"
                     /pseudo
     CDS             complement(5955..8069)
                     /locus_tag="WJJ54_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581764.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(8752..8997)
                     /locus_tag="WJJ54_000853"
     CDS             complement(8752..8997)
                     /locus_tag="WJJ54_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341741.1"
                     /translation="MLKSIELNSHIRNRLAEYLKGRGMDFQTAMQEEKGNKEIAAIVH
                     SGLPTLVRKLYSEQKMQKFFWEKRDLIADYISRRMQG"
     gene            9109..9537
                     /locus_tag="WJJ54_000854"
     CDS             9109..9537
                     /locus_tag="WJJ54_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEZ7341742.1"
                     /translation="MMFSWFKLFHLFFVISWFAGLFYLPRIFVNMAMIDVPRGNPEYV
                     RLSGMAVRLYRFMSPLGFGAVVFGAAIPFAAGWWGSGWVHVKLCLGLMLLAYQLYCGV
                     LLRRFQDYSNAFSHRWYRVFNEIPVLLMVAALYLVVFKPF"
     gene            9549..10025
                     /locus_tag="WJJ54_000855"
     CDS             9549..10025
                     /locus_tag="WJJ54_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HEZ7341743.1"
                     /translation="MPIEIERRFLIENDNWRQYADEPLLLRQGYLSVEKERTVRVRIA
                     GQRAWLTLKGYISELSRSEFEYEIPLADAEKMMETMCPFKMEKWRYPVRWGGSLFEID
                     VFLGDNAPLVVAEIELPDENADFDRPDWLGREITADGMFTNAYLSRHPFSSWKNAV"
     gene            complement(10375..10863)
                     /locus_tag="WJJ54_000856"
     CDS             complement(10375..10863)
                     /locus_tag="WJJ54_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEZ7341744.1"
                     /translation="MLKITLIAACAENLCIGAGNAMPWHIPEDFAFFKAYTLGKPVIM
                     GRKTWESLPVKPLPGRRNIVISRQADYCAAGAETAASLEAALALCAGAEEAVIMGGAQ
                     IYGQAMPLATDLRITEVDLSVEGDAFFPAIDRTHWKEAERTERRVSSKGTRYAFVHYL
                     RY"
     gene            complement(10931..11986)
                     /gene="aroG"
                     /locus_tag="WJJ54_000857"
     CDS             complement(10931..11986)
                     /gene="aroG"
                     /locus_tag="WJJ54_000857"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HEZ7341745.1"
                     /translation="MTHHYPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQE
                     ISDLVHGRDKRLLVIIGPCSIHDPKAALEYAERLLKLRKQYENELLIVMRVYFEKPRT
                     TVGWKGLINDPHLDGTFDINFGLRQARSLLLSLNNMGMPASTEFLDMITPQYYADLIS
                     WGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLSVTKAG
                     HSAIVHTGGNPDCHVILRGGKEPNYDAGHVSEAAEQLRAAGVTDKLMIDCSHANSRKD
                     YTRQMEVAQDIAAQLEQDGSNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWGATEE
                     LLALLAGANKKRMARAG"
     gene            12338..12537
                     /locus_tag="WJJ54_000858"
                     /pseudo
     CDS             12338..12537
                     /locus_tag="WJJ54_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697603.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            12626..12904
                     /locus_tag="WJJ54_000859"
     CDS             12626..12904
                     /locus_tag="WJJ54_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341746.1"
                     /translation="MRGKTKVMTTQMGASRDVSKSAKGWSVGIGLNVGKQLTDSVDLE
                     FDPYYRHKTICKPREIVLDGDKTKMGRSKSNEYGFRVAATFYSQLKSK"
     gene            complement(12886..13107)
                     /locus_tag="WJJ54_000860"
                     /pseudo
     CDS             complement(12886..13107)
                     /locus_tag="WJJ54_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755953.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         3002 a         3721 c         3162 g         3254 t
ORIGIN      
        1 acacggaaaa cgccgccgtc caaaccatgc cgtctgaaga aaactacaca gataccgccg
       61 cttatattac aatcgccgcc ccgtggttcg aaaacctccc acactaaaaa actaaggaaa
      121 ccctatgtcc cgcaataccg aagagctgca aggcatctcg cttttgggta atcagaaaac
      181 ccgatatccg accggctacg cgcctgaaat tctcgaagca ttcgacaaca aacatcccga
      241 caacgactat ttcgtcaaat tcgtctgccc agagttcacc agcctctgcc ccatgaccgg
      301 gcagcccgac ttcgccacca tctacatccg ctacattccg cacatcaaaa tggtggaaag
      361 caaatccctg aaactctacc tcttcagctt ccgcaaccac ggcgattttc atgaagactg
      421 cgtcaacatc atcatgaaag acctcattgc cctgatggat ccgaaataca tcgaagtatt
      481 cggcgagttc acaccgcgcg gcggcatcgc cattcatccg tttgccaatt acggcaaagc
      541 aggcaccgag tttgaagcat tggcgcgtaa acgcctgttt gagcacgacg cacaataaac
      601 catccttccc gtatttcaga cggcattcct tcgatacggt atgccgtctg aacgcttttc
      661 cgaaagattt ttatgtacgc atttaccgac gcacagcaac agaaggcact cttctggctg
      721 gtgctttttc atatcctcat catcgccgcc agcaactatc tggtgcagtt ccccttccaa
      781 attttcggca tccacaccac ttggggcgca ttttccttcc ccttcatctt ccttgccacc
      841 gacttgaccg tccgcatttt cggttcgcac ttggcacggc ggattatctt ttgggtcatg
      901 ttccccgccc ttttgctttc ctacgtcttt tccgttttgt tccacaacgg cagttggacg
      961 ggcttgggcg cactgtccga attcaacacc tttgtcggac gcatcgcgct ggcaagtttt
     1021 gccgcctacg cgctcggaca aatcctcgat atttttgtat tcaacaaatt acgccgtctg
     1081 aaagcgtggt ggattgcccc gaccgcatca accgtcatcg gcaacgcctt ggatacgctg
     1141 gtatttttcg ccgttgcctt ctacgcaagc agcgatgaat ttatggcggc aaactggcag
     1201 ggcatcgcct tggtcgatta cctgttcaaa ctcaccgtct gcggtctgtt tttcctgccc
     1261 gcctacggcg tgattctgaa tctgctgacg aaaaaactga cgaccctgca aaccaaacag
     1321 gcgcaagacc gccccgcgcc ctcgctgcaa aatccgtaac acagccctgc cgggaatcgg
     1381 gacggttggg ttttctttta tttgcaaaca ctgccggaac ggataaatcc ggattcccgc
     1441 cacttcgtca ttcccgcgaa agcgggaatc cggtgcgttg ggtttcagtc atttccgata
     1501 aactcctgcc gcgttgtatt tctagattcc cgctttcgcg ggaatgacgg cggatgggtt
     1561 tccgtgccgt ggtgtccgga ttcccgcccg tacgggaatg acggcagtgc ttccttggct
     1621 taattttatt ttaatcaact gcaaatgccg tctgaaaacc ggtttgcaga ttttcagacg
     1681 gcattgtttt cgtcgccggt tcaaacttca atccgattgc gacacggtaa ccggtatgcc
     1741 gcgcaagcgc gcaagcagcg cgtccgcctt ctgtttctgc gcggcaaacg ccgccttgtc
     1801 cgcctgcgtc aattcgggtg tcggcaatgc gactgaaaca ggattgacgg gctgcccgtt
     1861 gatgcgtgcc tcgtaatgca ggtgcggccc ggtcgaacgc cctgtcgaac cgacaaaacc
     1921 gatgacctcg ccgccgcgca cattgccttg tgcctgcgaa aacgcgctca agtgcgcgta
     1981 cagcgtttcc acgccgttgg cgtggcgtat catcaccgcg ttgccgtatc cgcccttccg
     2041 gcctttaaag gtaatcacgc cgtcggcgga agccctgacc ggcgttccct gcggtgcggc
     2101 ataatcgatg cccgtgtgca gccgccaagt gtgcaggatg gggtgcatgc ggtagccgaa
     2161 cggcgaagaa atgcgcgtat agaccagcgg ctcgatgttg aagccgcctt tttcctgcaa
     2221 caccctgccg tcttcatcgt aataattgcc gccccctccg ccttccttgt ccgaacggta
     2281 atagaacgcc tgatgccttg tgccgccctt aacgacttca gccgccaaaa tatcgcccgc
     2341 cgccacctgc tgcccgtgga aatacaggct gtcgtaaatc aggcgcacgg catcgccttc
     2401 cttcaaaccg tcaaggctga agcggccggc gaaaatcccg cttaaggatt cgcggatttc
     2461 gacgggcact tccgcccgcg ccagcgaacc gcgcgccgac gttttgacca cgaccgaacg
     2521 cagcgtcggc aaaaccttca tatccgcctc agaagccgac cgccgccata tgccgccttt
     2581 cttttccaaa gcgaccagat tgcgctcgcc gtcttcgtcg gtaaaaaact gcacttcgcg
     2641 cgcgccgccg tcgccgccga ccaaaacatg aaccgactgg tcggcacgca aatgccgcaa
     2701 atcggcttcg ccgccatatt tttccgtgat tcgggcaatc tcgtcccgcg ccatacccga
     2761 acgcgccagc acgtccgcca gcgagtcgcc cggctgcacc gcctcctgca cccaatatgc
     2821 cgtctgaacg ccgctgccgc cccaagacag cggcggcaga ttttgttcca cgcgctgcgg
     2881 tctgacgcgc tccgtcctct ctgtcgaagc aatgtatgcc gccgacacca aaataatcga
     2941 aacggcaagc gcacggagcg cgtatttccg atgttttgcc gaaagcggga agacagccat
     3001 attgttcctt tttgacggcg tttgcgccga atcctctata atgttgcgcc tgacctgcat
     3061 ttctgaaacg tcaaacgatg aaactcaccc tcgccctccc ctcgctcaat ttggatgaag
     3121 acgaaatccg aatacctcta tgcctgcacg ccttcaacaa aatcctgcaa tacggctcgc
     3181 cgtatcgcca aagctgcacg gcttcggcat tttacgcgcg ttatttgtgg tgcggcagac
     3241 tggcggaacg cgcggcgcaa agcctgaata tgccgtctga agccgtcgcg ctcgccacgc
     3301 ccgtctggca aaaaatgggg ctgcatcagg caaatgtact gacggcggaa tatctgaacg
     3361 tcggtacgga tgaagccgaa cgcctctgcc gcgatttgtc tgaattttac gccgatactc
     3421 cctggcattt cacgcccgtc ctgcccgaat tatggctggt ttcccttccc cgcgcgtacc
     3481 gctggggcgc gaagcccgtt ttggacttgg gcggattatt gggcgcggac gatcagccgg
     3541 acgggaaaga ctcgttggaa tggctgcgcg tccaaaccga aatccaaatg tggctggcgg
     3601 cacaccccgt caaccataac cgcaagaaac gcgggctgcc cgagttgaac ggcttatggc
     3661 tttgggacag tctgcacgga agcagtcaag gcggcacgct tttcgccgat acggtttgga
     3721 gccgtttcca ccccgaccgc cgcgcattgc ccgacaactt ccgcgcctat gaagaaacgg
     3781 cggcacacct gcccgacacg caccatatcc tgtttatgga cgatttgcgc ctgaccgccc
     3841 tgacagggga cagggagcgg tatgcatcgg ttttacagca gtgggaagaa cactggttcg
     3901 caccgatcta cgaagccgtc cgtaccggca aaatcaaacg gctggacatc accacggacg
     3961 gacaacacgg cggtacgctg accttcaaac ccgccgacag gtggaaattt tggcgcggcg
     4021 cgaaaacctt tgacggaatc tagtgaaccc gcccgccgca accgcgacaa tgccgtctga
     4081 agcccgaatc gggtttcaga cggcatttta cctcgcatcg ccgttatgcc ggaaaaaccg
     4141 gaatgcgttt ccgcacacgc ggcggcacgc aaagcaccgc ccgaaagccg ccgatgcccg
     4201 ccgtgatacc gccgccggca gggtttcctc cgaaaaggaa cagcaatcag aacgttttat
     4261 taaactcgac aaacgcccga tttttctcgt attcgttgaa cacatcgtta ctccgcgttt
     4321 cgcggtgcga caacgtcagg cgcggcgtga tgcctttgaa atgcaatgcc cggtgccaaa
     4381 ggctcaagga tgtgttcaat tctttatccc tgcgcctttc ccctttaaaa ccgctgaaaa
     4441 agccgggttt ttcataatgc cgtttcgccg cgccgaggcg caacagcgaa gacaggccgc
     4501 tgccgcccca ttcctgcccc caggcaaagc gcaggccgta acggttgaaa ttgtcgcctc
     4561 ggtcggcggg gttgcgctcg cggtaaaaat ccaaaccgcc catccaatat tggcgcgcat
     4621 tccggtaaaa caccagcgaa ttggaaattt gcaaatgggt attgtcggaa cgcgcccggc
     4681 gcgtattctt caaacgcccc cactccgccg aagacaacgt ttgccatttc ggggtttgcc
     4741 aacggttgaa ataaaggcgt gcgccgttgg tgtaagaata agcgtcgttg ccgtaggtgc
     4801 ggcgttcgtg gaacactgcc agcccggcat ctttgcgccg gtcggcaaaa ccgatgccgc
     4861 cggaaacgcc tgccgtcata tcgttgaatt tcttattccc cggataaacc ctgccggaca
     4921 cgtcgccgcc cgccgtcgtg taccagccgt ttttcagcga ccattttttc tccgcgccga
     4981 gccggtaatt gaccgccgtg ccgtccacct gtttcgggaa agtccatttg ccgtactgct
     5041 gccgtttcgg ggcttggttg atattgtgtt cgcgggtgac gctgaagccg ccatttacct
     5101 tccacgcatc gcgttcgcgc aatgccttgc ggtacagctc gacctgctcc atcagctgcg
     5161 gcggcaggtt ttccgccttc aggcggtcga actggtctgc cgccgcctcg ttctgcctgt
     5221 tgtcaaacaa tgccgccgcc aaacgcatac ggacggcggg cgcgtcgggt tgggcggcaa
     5281 tcaattcccg gtaatgggaa atcgcttctt tcaccctacc gtctgtctgc gccaaaatcc
     5341 cttgtgcata aagtgccaac atcttatcct gctgcgcctg ttgtaggtaa atcggcaaaa
     5401 taacgcggat accggcaata ttgtttgaga ccactgcgga atacatcgcg cgggacagca
     5461 attcgggatt tttcagcagg gtttcgccgt caatctgcaa aacttttcct ttttcccgca
     5521 cctgccccgg taccttctcc ctgtcgattg gtttgacctc cgcttcatga agcctgaact
     5581 cgggacggct tctcaaatcc ggttcgcgcg gtgtttcttc ggcatatgcc gcgcttgcca
     5641 ataaaggcag cagcagcatc catctgtttc gtgcaggcat aaatgtcttc ccacaaaaat
     5701 aaaaaataac cattatcaac cggcggattg tatcagtttt ttatgccgct gttccaaacc
     5761 ctgccgcccg atgccgcgac aatgccgtct gaagccagaa tcgggtttca aacggcggca
     5821 aaaaaccggc ggttttccgc cggtttcatc atgatgcccc gcccttcggg gcggcagggt
     5881 tcggattggt ttgcggggcg gcgcgcggtg ccgtgccggt gtgccgcctg tacgtcaaaa
     5941 catttcccga cgcatcaaaa cagccatttg agcgacaatg cggcttcttt gtcgccgtcc
     6001 gtccttttgc cgtatccaat gcgtgcggac atatggcctt tccaaccggc ttcaatgccg
     6061 aaccgccctt cgagtgccgt cctgcctgcc agcgtctgtt tttcgccgtc catttccacg
     6121 ccgaaagatt ttgacctgtg caaaacatta aaagcggcaa aaggctgaag attgacaccg
     6181 ttacgcaaag caaaacgggt ttttgcccga atgccagcgc ggctttgcca ctgaccgctg
     6241 ccgagcagtc cgaccgccgt cccctcgctg tcggtaaagc cgccgtttac gcccaagtag
     6301 gtaaactgag cctgcggttg caggtaaaac cgcacattat tgccttttcc gacaacgcct
     6361 tccgccacaa gcgcgttgta gccgccttcg acagaagccg tccaaccttt ggttttgtag
     6421 cgttccgcac ggttttcatc attgatgcga tgtttgaaac gttggtattg caaccagccg
     6481 tccaaatacg cacccgtttg tttatcgcgc aactgatgcc acgcagcata aacacccccg
     6541 ccataaccat gcaaataact gcctgccgca ccgcctttgc cgttgactga tgcgtgctgg
     6601 ccggccctgc cgcccatcac gccgattgcc agtcggctgc cttcattttg ccgtacaaac
     6661 acctcgccgc cgatttgcac gcctttgcgc cgcccgtccg cagccgcgcc gccccgtata
     6721 ttttgatgcg accgaccgcc gatgaagcgc agccacaatt tttgacggga cggatcggcg
     6781 gcatacacgt cgtcgcccct gtcggcggca cgcagcccaa acaaagtatt tgccgcataa
     6841 gcctgttggg catataaaac cgcttccgcc tcggggatag ccaaacgctg cacgcccaag
     6901 caaaatccgc cttcgcattg cttgagcaat aattcgtaca gtccctgccg gtaattttgt
     6961 ttaaacgcaa acgaattaga gtctgccttt tccgccgcaa tcagtttgcg cccgtcgagc
     7021 gttttcagat tttccggccg gcgttccaaa accacgccgg attttccgct gactttttct
     7081 tcaaaggtca gggcgggttc gtccgactcc cgcacgtcgt agccgaacag gaaatccgca
     7141 ccgcccttat acgctttatg gacggtcagt ttttcatctt tcgtgttcag gcggatgcgg
     7201 gcattatcgg aagtttccag cgtatggatg tcggaatggc ggcgcggttc ccaaagggaa
     7261 tctttcagcg tcatcttggt cagttccaac acctgtccgg cgacgtggga tttgttttcg
     7321 attttgacgt gtaatttttt attgaagatg ttgttgagac tagtctgtga tgtattacta
     7381 tgaggagtga gtacggaatc ttctaccaat ttattaatta aatcggggtt tttctgtttg
     7441 agtatactaa attttggtcc aagctgttct atatacgcct cctcagtccg ttttttattt
     7501 tcttcccaag cttcgggtct tgttttgtat aaatcctgta attgcttctt aaccgcatcc
     7561 tttaaattat ccccgtaagt atctgtaata tatttcttaa caacgggcat attatcgacg
     7621 gcgagtatgc cgctattgta gtttttacct tggatattga tttcgtcata cccatattcg
     7681 gatgaatttt gatcggtttt accgctggaa aaataatggg aagtgccggg tttcggcttg
     7741 tctgaaaatg aaaaatcggc atcgtcgccg attttggtag aacgagtatt tgaaccaagc
     7801 tgagctctga acataccgaa gcaatcaaaa gatatgctgc acgggccgcg ccaaacgtgg
     7861 gaatttctgt cttccgccgc ttctaaaata aatttgtttt taatctcggc ttctttgacg
     7921 ggatcgtacg catccgaacc tcaaacatat ggcgtgcaaa acagcgataa aacagataat
     7981 gttaatagat taacccgacc gcttgcttgc ttgcttgctt gcttgcttgc ttgcttgctt
     8041 gcttgcttgc tttcagtgtc atgagaaatt ttcctttgtc aagtgttaaa attataatga
     8101 ttatatacta catcacacta catcacacta catcgcaatg aaaaatcagg aaaaacaaaa
     8161 aacctctccg ccgtcattcc cgcgcaggcg gaaatctaga attttaatgc ggcaagaatt
     8221 tatcggaaaa aactgaagtt taaagaccta gattcccgcc tgcacgggaa tgacggttta
     8281 gaaatcacct gaaacgagaa aaagaaccga aaccagataa gtcggattcc cgcacgggag
     8341 ggaaggacgg gatttcaggt tactgttttt gattttctgt tttgtgggaa taacgggatt
     8401 ttggatgatg tgcattttcg ggaaaactaa aaaccctccg ccgtcattcc cgcgaaagcg
     8461 ggaatctaga attttaatgc ggcaaaaatt tatcggaaaa aaccgaagtt taaagaccta
     8521 gattcccgcc tgcgcgggaa tgacggttta gaaatcaccc gaaacgagaa aaagaaccga
     8581 aaccgaacaa gccggattac cgcctgcgcg ggaatgacgg ctcaaaagtt acgaaacgaa
     8641 aaataaccga aaccaaacaa gtcggattcc cgcgcgggcg ggaatgacga taagcgtaat
     8701 ttcaatctgc catattgtct tttcacttgc ctgaaaacag atttcagcca cctatccctg
     8761 catccggcgg ctgatgtagt cggcaatcaa atcccgcttt tcccaaaaaa acttctgcat
     8821 tttttgttcg gaatacagtt tgcggaccag agtgggcaaa ccgctgtgga cgatggcggc
     8881 gatttctttg ttgccttttt cttcctgcat tgccgtctga aaatccatac ccctgccttt
     8941 cagatattct gcaaggcggt tgcggatgtg ggaattgagt tcgatggatt tgagcatttt
     9001 gcctccgttt tgcggtaagg atttattcga tttgtttatc cgcctgattt tatcacgttt
     9061 cccaagcggt ttgcctgtac aataccgctt ttcggcaggg tgtgggcgat gatgttttct
     9121 tggttcaagc tgtttcactt gttttttgtc atttcgtggt ttgcagggct gttttacctg
     9181 ccgaggattt tcgtcaatat ggcgatgatt gatgtgccgc gcggcaatcc cgagtatgtg
     9241 cgtctgtcgg gcatggcggt gcggctgtac cgttttatgt cgccgttggg cttcggcgcg
     9301 gtcgtgttcg gcgcggcgat accgtttgcc gccggctggt ggggcagcgg ctgggtacac
     9361 gtcaaactgt gtttgggctt gatgctcttg gcttaccagt tgtattgcgg cgtgctgctg
     9421 cgccgttttc aggattacag caatgctttt tcacaccgct ggtaccgcgt gttcaacgaa
     9481 atccccgtgc tgctgatggt tgccgcgctg tatctggtcg tgttcaaacc gttttgacgg
     9541 agcatcttat gccgatagaa atcgaacgcc gttttttgat tgaaaacgac aactggcggc
     9601 aatacgccga tgagccgctg ctgttgaggc agggttatct atctgttgaa aaagaacgca
     9661 ccgtccgtgt ccgtattgcc ggacaacggg cgtggctgac gctgaaaggc tatatttcgg
     9721 aactcagccg cagtgagttt gaatacgaaa tcccgcttgc cgatgcggaa aagatgatgg
     9781 aaacgatgtg tccgtttaag atggaaaaat ggcgttatcc ggtcagatgg ggcggcagcc
     9841 tgtttgaaat cgatgttttt cttggcgata atgcgccttt ggtcgtcgcg gaaatcgagt
     9901 tgcccgacga gaatgccgat tttgaccgtc cggactggct gggacgggaa atcactgccg
     9961 acggtatgtt taccaatgcc tatttgagca ggcatccgtt ctcaagctgg aaaaatgccg
    10021 tctgaagcgg cttcagacgg cattctccga caaccatcgc aaatccaaag acagcctcta
    10081 tatccttatt tctgctttct ttgttccatt attcccaata aatccccata acctaaaatc
    10141 tcgtcattcc cgcgcaggcg ggaatccggt tctttaaact tcggtttttt ccgataaatt
    10201 gctttagctt ttcgtttccg gattcccgct tttgcgggaa tgacgatgga agattgttgt
    10261 tatttcggat aaattaccct aactttaaaa tcccggattc ccatcttcgg gggaataaca
    10321 atattttcta tttcagccca tcatttgcgg gggattttat agagagttta tatttcaata
    10381 tctcaaataa tgcacaaaag catagcgcgt gcctttgctg ctgacacggc gttccgtccg
    10441 ctctgcttct ttccaatgcg tccggtctat tgcggggaaa aatgcatctc cttccacaga
    10501 caaatccact tcggttatcc gcaaatcggt cgccaatggc atcgcttgtc cgtatatctg
    10561 cgcgccgccc ataatgacgg cttcttccgc gcctgcgcac aatgccaatg ccgcctccaa
    10621 acttgccgcc gtttccgcgc ctgccgcgca ataatccgcc tgccggctga tgacgatgtt
    10681 cctccgtcca ggcaggggtt tgacgggcag ggattcccac gttttccgcc ccataatgac
    10741 gggtttgccc aaggtatagg ctttgaaaaa tgcgaaatct tcggggatgt gccaaggcat
    10801 agcattgccc gccccgatgc acaggttttc cgcacacgcc gcaattaggg ttattttgag
    10861 catatttcct ccacaaaaat gccgtctgaa cgcttcagac ggcattttat gacattccgt
    10921 gtcaaaaatc tcaaccggcg cgcgccatac gttttttgtt tgcacctgcc aacaatgcca
    10981 acagttcttc agtcgcgccc caaccgatac acgcatcggt aatgcttttg ccgtacactt
    11041 ccggcttatc ctgtctgcct tcgaccaaat ggctttccac catcacgccc ataatattgc
    11101 tcccgtcctg ttccaattgg gcagcaatat cttgtgccac ttccatctgc cgggtgtaat
    11161 ccttgcggct gttggcgtgg ctgcaatcta tcatcagctt atcggttacc cctgccgcac
    11221 gcagttgttc cgccgcctcg ctgacgtgtc ccgcatcata attcggctct tttccgccgc
    11281 gcaaaatgac atgacagtcg ggattgccgc cggtatggac aatggcggaa tgtccggcct
    11341 tggttacaga caagaaatga tgcgaatggc tcgccgcacc gattgcgtcg atggcaatct
    11401 tcaaattgcc gtccgtaccg tttttaaagc cgacggggca ggacagcccg cttgccaatt
    11461 cgcggtgaac ttggctttcg gtcgtccgcg caccgattgc cccccaagaa atcaagtccg
    11521 cataatattg cggcgtaatc atatccaaaa actcggtaga ggcaggcata cccatattgt
    11581 tcagcgacaa caacaggctg cgcgcctgac gcaaaccgaa attgatatcg aacgtaccgt
    11641 ccaaatgcgg gtcgttaatc aaacctttcc aacccaccgt cgtcctcggc ttctcgaaat
    11701 aaacgcgcat cacaatcaaa agctcgtttt catactgctt gcggagtttc aacaaacgct
    11761 ccgcatattc caacgccgct ttcggatcgt gaatcgaaca cggcccgata atgaccaaca
    11821 gccgcttgtc cctgccgtga accaaatcgg aaatttcctg acgggtgcgg tgaaccaagc
    11881 ccgaagcctc tttggaaatc ggcagctcgt aaagatgggc aatcggcggc aacagctctt
    11941 taacttcttt aatcttaata tcgtctgtgg ggtaatggtg tgtcatcttg catctttcct
    12001 gatgggtttt tatacgcggc ttaggttaca tcgtttacct tgcacaaaca agtgcaacat
    12061 attactacaa agctatttta tttcaaaata actgatatat cttttttcat agattttaaa
    12121 tttcatattt ttaatatttt aggaatttta ttccaaagaa aaagaaacag attgataaaa
    12181 acaataccca ccattcattc ggacaaaacc gcacggaaca tccgttttcc catttccacg
    12241 acaatccggt acagaacacc ccgctgccga ttccgcctgc acatctggca aaatttcata
    12301 cacaaggaaa atgttgaaaa caaaaagaac tcattgcttg aaaaaagatt taattggaat
    12361 gcgggtattt cccacacttt ctccatttat ttatcctcat tataaaaaca tgaaaaaacc
    12421 ctgcttgcac tctcacttgc agccgtgtcc gccgttacgg tagccgatat tcccgagtct
    12481 aacggcaaag gcaaagccat catcggcgat aaggaaaaac accgttacca agcatgaaaa
    12541 ccttgctttg aaagtccatg gcgaaatccg ccaagatttg ggggacggat gatccctaac
    12601 cccttgggcg gatgcatatg cagatttgcg cggcaaaacc aaagtgatga cgacccagat
    12661 gggtgcttcc cgcgatgtca gcaaaagcgc caaaggttgg agtgtcggta tcggtctgaa
    12721 tgtaggcaaa cagttgaccg acagcgtcga tctcgagttt gatccatact accgtcacaa
    12781 aacaatctgc aaaccccgtg agattgtctt ggacggtgac aaaaccaaaa tgggccgctc
    12841 caaatccaac gagtacggct tccgcgtagc cgcaacgttc tatagtcaat taaaatcaaa
    12901 ataggacagt agtgcatcgt caaatcgggc gtaatcagac aaaacggttc gcagataccg
    12961 cttaatattc gcccacactt tctcaatcgg gttgagctca ggtgaataag gtgcaagagg
    13021 caatacctta tgtcccaatt tttccgccat ttcccgtaag acacccatac ggtgaaatca
    13081 cgcattatct aaaatatagt ggattaacaa aaatcaggac aaggcgacga agccgcaga
//
LOCUS       DAWKJW010000042        12150 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.042, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000042 DAWKJW010000000
VERSION     DAWKJW010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12150)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12150)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12150
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.042"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(60..482)
                     /locus_tag="WJJ54_000861"
     CDS             complement(60..482)
                     /locus_tag="WJJ54_000861"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEZ7341747.1"
                     /translation="MSIMQVEVVSSEQNIYSGEASFVVVPTVQGELGIYPRHEPIMSL
                     VRPGALRLTVPGEDKEVLVAVSGGVLEVQPDKVTVLADVAVRSAEMDQARAEEAKKAA
                     EAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK"
     gene            complement(493..1890)
                     /gene="atpD"
                     /locus_tag="WJJ54_000862"
     CDS             complement(493..1890)
                     /gene="atpD"
                     /locus_tag="WJJ54_000862"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEZ7341748.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTLEVQQL
                     LGDGVVRTIAMGSSDGLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGRIDT
                     DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLG
                     IYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDK
                     LTVMRARKIQRFLSQPFHVAEVFTGSPGKYVALRDTIAGFKAILNGEYDHLPEQAFYM
                     VGSIEEAVEKAKTLN"
     gene            complement(1928..2803)
                     /gene="atpG"
                     /locus_tag="WJJ54_000863"
     CDS             complement(1928..2803)
                     /gene="atpG"
                     /locus_tag="WJJ54_000863"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEZ7341749.1"
                     /translation="MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARP
                     YAEKVRMVMSHLAQTNTDHGIPLLESHREIRRVGFILITSDKGLCGGLNANVLKKFLA
                     QVQEYRNQGIEEEIVCLGSKGLMACQSIGLNVVASAVNLGDTPKMEMLLGPLTELFQR
                     YEKHEIDRIHLVYSGFVNTMRQEPRMEVLLPIGENVIGDSAPKSPFSWEYRYEPTALA
                     VLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAA
                     ITTELSEIVAGAAAV"
     gene            complement(2828..4375)
                     /locus_tag="WJJ54_000864"
     CDS             complement(2828..4375)
                     /locus_tag="WJJ54_000864"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEZ7341750.1"
                     /translation="MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGL
                     SDAMQGEMLEFPGNTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRE
                     LVGRVVDALGRPIDGKGPINTTLTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVG
                     RGQRELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAM
                     EHTIVVAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAYPGDVFYLHSRLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGG
                     IRLALAQYRELAAFSQFASDLDEATRKQLEHGEVVTELMKQKQFSTLNTAEMALTLWA
                     INNGSYSDVPVAKALAFESEFLSFVRTQHPEVLEAVNASGAMSDESEKTLEAAMKSFK
                     SSYAYQA"
     gene            complement(4386..4919)
                     /locus_tag="WJJ54_000865"
     CDS             complement(4386..4919)
                     /locus_tag="WJJ54_000865"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEZ7341751.1"
                     /translation="MAEFATIARPYAKALFGLAQEKSQIESWLGGLEKLAAVVQEGKV
                     ASLIDRPETNASEKADILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLS
                     FNHIKSAVIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
                     DLSVQGKLSALYTTMTN"
     gene            complement(4924..5394)
                     /locus_tag="WJJ54_000866"
     CDS             complement(4924..5394)
                     /locus_tag="WJJ54_000866"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEZ7341752.1"
                     /translation="MNINATLFAQIIVFFGLVWFTMKFVWPPIAKALDERAAKVAEGL
                     AAAERGKSDFEQAEKKVAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASSEAARIA
                     AQAKADVEQELFRARESLREQVAVLAVKGAESILRSEVDASKHAKLLDTLKQEL"
     gene            complement(5465..5701)
                     /gene="atpE"
                     /locus_tag="WJJ54_000867"
     CDS             complement(5465..5701)
                     /gene="atpE"
                     /locus_tag="WJJ54_000867"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEZ7341753.1"
                     /translation="MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPL
                     QTKLFLIAGLIDAAFLIGVAIALLFAFVNPFAGA"
     gene            complement(5758..6624)
                     /gene="atpB"
                     /locus_tag="WJJ54_000868"
     CDS             complement(5758..6624)
                     /gene="atpB"
                     /locus_tag="WJJ54_000868"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEZ7341754.1"
                     /translation="MAGETITAADYIKHHLQSLTSLSDVTQGQGLKNIADFSFINLDA
                     VFFAVLLGVIGSFLLWRGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHNEKSRKAV
                     APLGLTLFVWIFLMNAMDMLPVDLLPMVWQGITGNHHALLRVVPTADLNTTLALAVGV
                     LLICIYYNIKIKGLGGWFHELFSAPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMY
                     AGELVFLLIALLGGAWAASGSVEVMDPILFVFHIIAGLAWAIFHILVITLQAFIFMAL
                     AFVYIGQAHDAH"
     gene            complement(6614..6967)
                     /locus_tag="WJJ54_000869"
     CDS             complement(6614..6967)
                     /locus_tag="WJJ54_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HEZ7341755.1"
                     /translation="MKQIIILQSAVLSICAAVAFAVWGFAGFLSAVGGGLSYLLPTFV
                     AVLLLKLFRGNPFLQSRMFVFGEILKVVLSLLSMLAVFAIWHQSLVFAPFLMGLLGVS
                     HLVFLVLLRVKDYGR"
     gene            complement(7335..7673)
                     /locus_tag="WJJ54_000870"
     CDS             complement(7335..7673)
                     /locus_tag="WJJ54_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341756.1"
                     /translation="MNTRIIVSAAFVALALAGCGSINNVTVSDQKLQERAAFALGVSP
                     NAVKISNRSNEGIRINFTATVGKRVSQCYVTSVISTIGVTTSDAICLGGGTHKGKSQC
                     NALLKAAGRC"
     gene            complement(7808..8668)
                     /locus_tag="WJJ54_000871"
     CDS             complement(7808..8668)
                     /locus_tag="WJJ54_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEZ7341757.1"
                     /translation="MAKVKGGLGRGLDSLLANGADNSSGDRLTTVAVKDIRPGRYQAR
                     VQIDDEALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVI
                     KTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISN
                     SLRLLSLPEPVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQ
                     AALQNKRPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHI
                     LKQLGIDYRP"
     gene            8826..9395
                     /locus_tag="WJJ54_000872"
     CDS             8826..9395
                     /locus_tag="WJJ54_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEZ7341758.1"
                     /translation="MVRRLIIGISGASGFQYGVKALELLRAQDIETHLVVSKGAEMAR
                     ASETAYARDEVYALADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDN
                     LLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTAD
                     DIVAHSVAHALSLFGIDTPDSAEWQGMAD"
     gene            complement(9457..10320)
                     /locus_tag="WJJ54_000873"
     CDS             complement(9457..10320)
                     /locus_tag="WJJ54_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341759.1"
                     /translation="MKTFFKTLSAAALALILAACGGQKDSAPAASASAAADNGAAKKE
                     IVFGTTVGDFGDMVKEQIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKP
                     YLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVM
                     LDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAI
                     SSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYK
                     SPAAWNEGAAK"
     gene            complement(10480..11166)
                     /locus_tag="WJJ54_000874"
     CDS             complement(10480..11166)
                     /locus_tag="WJJ54_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ7341760.1"
                     /translation="MAGLTFEQTVSNIIGMKGEIVRALGETFVMVGLSTTFAVVFGTL
                     LGVLLFVTSSRQLHYNKPVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPVA
                     ASLVLSVSGLFYFARLVEQNLREVPKGVIEAAAAMGAPPIAIVCKVLLNEARAGMVSS
                     ITVLAIGLLSYSAAAGMIGGGGLGDLAIRYGYYRYQTEVIVFIVALLVLLVILIQSTG
                     NTLARKLDKR"
     gene            complement(11169..11906)
                     /locus_tag="WJJ54_000875"
     CDS             complement(11169..11906)
                     /locus_tag="WJJ54_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEZ7341761.1"
                     /translation="MIILDKVSKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAG
                     KSTLLRLINLLERPDTGKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLNNRTVAG
                     NVAFPLEIAGWPSEKIKARVKECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKP
                     QVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKG
                     KVVEIVEVRGNQIHARSDIGRELIRED"
BASE COUNT         2921 a         3143 c         3115 g         2971 t
ORIGIN      
        1 aaaacttgga aaaataaaaa gcacgaccaa acggtcgtgc ttttccaaac caaacaagtt
       61 tatttcttgt gcgaacggat atagtccaaa gttttgagct gtgcaatcgc agcagccaat
      121 gctttatgcg cctccgccaa agccttatcg tctttagctt gggaaatgcc cgcttctgcg
      181 gcttttttcg cctcttccgc acgtgcctga tccatctccg cactgcggac ggcaacatcc
      241 gccaagacag ttactttatc aggctgtact tccaaaacac cgccggaaac agcaaccaaa
      301 acctctttat cctcgcccgg aacggtcaaa cgcaaagccc ccggccgcac caaactcata
      361 atcggctcgt gtcgcgggta aataccaagc tcaccttgaa cggtcggaac cactacaaag
      421 ctggcttcgc ccgaatagat gttttgctcg ctactgacca cctcaacttg catgatgctc
      481 atgccgacct cctcagttta aggttttcgc tttctcaacc gcttcttcga tgctgccgac
      541 catgtagaat gcctgttcgg gcagatgatc gtattcgccg ttcaagatgg ctttgaagcc
      601 ggcaatggta tcgcgcaggg cgacatattt gcccggagaa cctgtaaaca cttcggcaac
      661 gtggaacggt tgggacagga agcgttggat tttacgcgca cgcattacgg tcagtttgtc
      721 ttcgtcagac aattcgtcca tacccaagat ggcgatgatg tcgcgcaatt ctttgtattt
      781 ctgcagggtg gactgtacgc cgcgcgccac gtcgtagtgc tcttgaccca agaccatcgg
      841 atccagttgg cgcgaagtgg aatcaagcgg atcgactgcc gggtaaatac ccaaagaggc
      901 aatatcgcgg ctcaatacga cggttgcgtc caagtgggcg aacgttgttg ccggagacgg
      961 gtcggtcaag tcgtccgcag gtacatatac ggcttggata gaagtaatag aaccggtttg
     1021 ggtagaggta atacgctcct gcaaacgacc catttcttct gccaatgtcg gttggtagcc
     1081 cactgcagac ggcatacggc ccaacaatgc ggatacttcg gtaccagcca gagtgtaacg
     1141 gtagatgttg tccacgaaga acaatacgtc gcggcctttg ccgttttcgt ctttttcgtc
     1201 acggaagtat tccgccatgg tcaaaccggt caatgcgacg cgcaaacggt tgcccggagg
     1261 ttcgttcatc tgaccgtaaa ccattgccac tttatccaat acgttggaat ctttcatctc
     1321 gtggtagaag tcgttacctt cgcgggtacg ctcacccacg cctgcgaaca cggacaagcc
     1381 gctgtgcgct ttggcgatgt tgttgatcaa ttccatcatg ttcacggttt tacccacacc
     1441 ggcaccgccg aacagaccta ctttaccgcc tttggcaaac ggacacagca agtcaatcac
     1501 tttaatgccc gtttcgagca attcggttgt ggaagacagt tcgtcaaact taggagcggc
     1561 ttggtggatg gcacggctct tgtcggtatc gattcgacct gcctcgtcaa caggcgttcc
     1621 caatacatcg acaatgcgtc ccaacgtacc tttacctacc ggcacagtaa tgggcgcacc
     1681 ggtattgctc acagtcatgc cgcgtttcaa accgtccgag ctgcccatcg caatggtacg
     1741 gactacgccg tcgcccaaaa gctgttggac ttccaaagtc agaccgtttt cgtctaattt
     1801 caaagcgtcg taaacgcgcg gaatcatgtc gcgtggaaat tccacgtcaa caaccgcacc
     1861 gataatttgt acgattttgc cttggctcat tatcgtatcc taatttccgt acaggattca
     1921 gacggcatca gacagccgcc gcacctgcta caatttctga caattccgtg gtaatcgcag
     1981 cttgacgcga tttgttatat accaaacgca actctttgat ggcattgcct gcattgtctg
     2041 ttgcagcttt catggcaacc atgcgggctg cctgttcgga tgccatattg tcgctcaacg
     2101 cctgataaac cacagactct aaatagcggc gaaccagata ttccaacact gcaagtgcag
     2161 tcggttcgta gcggtattcc cagctgaacg gtgatttggg agctgaatcg ccaatcacgt
     2221 tctcaccgat aggcagcaat acttccattc tcggttcttg acgcatggta ttgacaaaac
     2281 ccgaatacac cagatggatt ctgtcaattt catgtttctc ataccgttgg aagagttctg
     2341 tcaaaggtcc gagcagcatt tccatttttg gggtatcgcc caaatttacg gcactggcaa
     2401 ccacattcag accaatgctc tgacacgcca tcagaccttt actgccaagg catacgattt
     2461 cctcttcaat accttgattc cgatactctt gaacttgtgc caaaaacttt ttcagcacgt
     2521 tggcgttcaa accgccacac aaacccttat cagacgtaat caaaataaaa ccgacacgtc
     2581 tgatttcccg atgagattcc agtaacggaa taccatgatc ggtattggtt tgcgcaagat
     2641 ggctcatcac catacgcact ttttcggcat acggacgcgc caaacgcatc cgttcctgag
     2701 tcttccgcat tttagaggtt gacaccatct gcatcgcttt agtgatcttt tgggtattct
     2761 gaacactgcg gattttggtg agaatctctt ttcctactgc catttcagac tcctttcact
     2821 tcaagcctta tgcctgatag gcgtaagaag atttgaagga tttcatggct gcttcaagcg
     2881 ttttctcgct ctcgtcggac attgcacctg aagcattgac ggcttccaaa acttccggat
     2941 gttgggtacg gacaaagctc aaaaattcag attcaaaagc cagagctttg gcaaccggaa
     3001 catcagaata cgaaccgttg ttgattgccc aaagggtcaa agccatttca gccgtattca
     3061 acgtactgaa ctgtttctgt ttcatcagtt cggttacgac ttcgccatgc tccaattgtt
     3121 tgcgcgtagc ttcatccaaa tcggatgcaa attgcgagaa cgccgccaat tcacgatatt
     3181 gtgccaacgc caaacggata ccgccaccca gctttttaat cactttggtt tgtgcagcac
     3241 cgcctacgcg ggatacggaa ataccggcat tgattgcagg acggataccg gcgttgaaga
     3301 ggtcggtttc caagaaaatc tgaccgtcgg taatcgaaat gacgttagtc ggaacgaaag
     3361 cagatacgtc gcccgcttgg gtttcgataa tcggcaaagc agtcagagaa ccggttttgc
     3421 cttttacttc gccgttggtc aatttctcca cttcgtgttc attgacacgt gctgcacgtt
     3481 ccaacagacg ggagtgcagg tagaacacat cgccgggata ggcttcgcgg ccgggcggac
     3541 ggcgcaaaag cagggaaatt tgacggtaag ccacagcctg tttggacaaa tcgtcataaa
     3601 caatcaaggc atcttcgccg cggtcgcgga agaattcacc catcgtacaa ccggagtaag
     3661 gtgcgatata ttgcaatgcc gccgcttcag atgcagttgc agcaaccaca atcgtgtgtt
     3721 ccatcgcgcc atgctcttcc aatttgcgga ccacgttggc aatagaagat gctttttgac
     3781 cgatagcgac atagatacag ataacacccg tacctttttg gttgacgatg gcatccagcg
     3841 ctacggccgt tttaccggtt tgacggtcgc caataatcaa ctcacgctga ccgcgaccga
     3901 caggaaccat agagtcaatc gccttcagac cggtttgcat cggctggtca accgatttgc
     3961 gcgcaatcac gcccggtgcg attttttcga taggggcggt caaagttgta ttaatcgggc
     4021 ctttgccgtc gataggccga cccaatgcat caacgacgcg tccgaccagt tcgcgtccga
     4081 ccggcacttc caagatacga ccggtacagg taaccgtgtc gccttcttta atatgttcgt
     4141 actcgcccaa cactacggcg ccgacggagt cgcgctccag gttcatcgcc aagccgaaag
     4201 tgttacccgg gaattcgagc atctcacctt gcattgcatc tgacaaacca tggatgcgaa
     4261 cgataccgtc agttaccgaa atcaccgtac cacgggtacg cacttcggca tttacagaca
     4321 gattttcgat cttggcttta atcaaatcgc taatttcagc aggattaagc tgcatgaaaa
     4381 ctctcctaat tcgtcatagt cgtgtacaag gcactcaatt tgccttgtac agacaaatcc
     4441 aaaacctgat cacccacttc aacttttatg ccgccaatca gctccggttc gatttcgaca
     4501 gagattttca gctcgctgtc gaaacgctta ttcagcattt gcgccaactc gccgacctgt
     4561 ttgtcggtca acggataggc actgtaaatg acggcagatt tgatatggtt gaatgataag
     4621 gtcaagtctt gatattgagc atatacttcc ggcaatatcg acaaacgttt ctgcccggcc
     4681 aagacgataa caaagttttt caactccttg tctttcaaac cgaccaaatc gatgaggata
     4741 tctgcttttt ctgaagcatt cgtttcagga cggtcaatca atgaagccac cttcccttcc
     4801 tgaacaaccg ccgcaagttt ttccagtccg cccaaccaag actcaatttg gcttttttcc
     4861 tgagccagac cgaacaatgc ctttgcataa ggtctggcaa tcgttgcgaa ctctgccata
     4921 agattacagc tcctgtttca gggtatcgag cagttttgcg tgtttggaag catcgacttc
     4981 gctgcgcaaa atagattcgg cacctttgac agccaacacg gcaacctgct cgcgcaggga
     5041 ttcgcgtgcg cggaacaatt cctgctccac atcggccttt gcctgagctg caatgcgcgc
     5101 cgcctcggaa gaagcctgtt ctttggcttc ttcgacaatt ttggcggcac gtttttcggc
     5161 gttggcaacc atttcggaaa cctgattacg cccttctgcc aagagttctg caaccttttt
     5221 ttcagcctgc tcgaaatcgc ttttaccacg ctcggcggca gccaagcctt cggcgacttt
     5281 tgcggcacgc tcatccaaag cttttgcaat cggcggccac acgaatttca tggtaaacca
     5341 taccaaaccg aaaaagacga tgatttgagc gaataatgtt gcattgatat tcacgttact
     5401 taaccttcgt actggggtta atcaaacagg ctgcgcctgt acggaacgga cgaatccgtc
     5461 ctgattatgc acctgcaaac gggttaacga aggcgaacag cagtgcaatg gcgacaccaa
     5521 tcaagaatgc ggcatcaatc aaaccggcaa tcaggaacag tttggtttgc agcggaccga
     5581 tcagttcggg ctgacgggca gaagactcca aatatttaga accgaccatt gcgataccga
     5641 tagaggcacc caatgcaccc aatgcaacga tcaaaccaca tgcgatagca atcaaaccca
     5701 ttttaaactc cttaaagaaa caaaggttaa actacaaaaa caaactactt aggaaaatca
     5761 gtgcgcatca tgtgcctgtc cgatatagac gaacgccaac gccatgaaaa taaacgcctg
     5821 cagggtaatc accaaaatat ggaaaatcgc ccatgccaaa ccggcaataa tgtggaatac
     5881 aaacagaatc ggatccatga cttcgacgct gccggaagcc gcccaagcac cgccaagcaa
     5941 ggctatcagc aagaatacca actcgcccgc atacatattg ccgaacaacc gcataccgtg
     6001 ggatacggtt ttagaaagaa actcgaccaa attcaacaga aagttcgcag gtgcgagttt
     6061 tgcaccgaac ggcgcgctga acaactcgtg aaaccagcca cccaatcctt tgattttgat
     6121 gttgtaatag atacaaatca gcaacacgcc gacagcgagt gccaaagtgg tgttcaaatc
     6181 ggcagtcggt acgacgcgca gcagggcgtg atggttgccg gtaatgccct gccataccat
     6241 cggcagcaaa tcgaccggca gcatatccat cgcgttcatc agaaaaatcc agacaaacag
     6301 cgtcagaccc aacggcgcga cggcttttct agacttttcg ttgtgaatga tgctcttaca
     6361 catatcgtcc acaaactcaa acaagatttc cacggcagcc tggaaacgtc cgggaacgcc
     6421 tgccgttgct tttttcgcac cgcgccacaa cagaaagctg ccgattacgc ccaacaggac
     6481 ggcaaaaaag acggcatcaa ggttaataaa cgaaaaatca gcaatgtttt tcagtccctg
     6541 accctgagta acatccgaca aactggtcaa gctctgcaag tggtgcttga tgtagtcggc
     6601 agcggtaatg gtttcacctg ccataatctt tcactctcaa caatactaaa aaaaccaaat
     6661 ggctgacacc gagcagcccc atcagaaacg gggcgaacac cagcgattga tgccatattg
     6721 caaatacggc gagcatggac aacagcgaca gcactacttt taaaatctct ccgaagacga
     6781 acatcctgct ttgcaggaaa gggtttcccc tgaaaagttt taaaagtaaa actgcaacaa
     6841 acgtgggaag caggtaggac aaaccgccac cgaccgccga aaggaatccg gcaaaacccc
     6901 atacagcaaa ggcaactgcg gcgcatatgg acaatacggc ggattgtagg atgataatct
     6961 gcttcataaa gggaatgttt ccgcctcgga tttggggcgc ggctaatata atttagaagc
     7021 cttattacgt caagcgacag ttaatctttg tgaaacaacg tatcccaatc cgccgcgctc
     7081 gccgcctgaa taacggcgac aggtgtcatt ctaacacaca ttacatataa ttacaggata
     7141 ttaaggagtt tgtccgcaat ttctttacac ttttaatgtt cttacgtgat ttgtttgctt
     7201 tacgtggaaa taataaaaaa tcaacgcgaa attgtagcag tttatcggtc ggattgtcgg
     7261 cagtttgggg aatttgctca ataaataaaa ggtcgtctga aaatattttc agacgacctt
     7321 ttccgaataa aggattagca acggcctgcc gctttaagca aagcattgca ttgacttttg
     7381 cctttgtgcg ttccgcctcc caaacaaatt gcatcggaag tggtaacgcc gattgtgctg
     7441 attacactgg taacatagca ttggctcacg cgcttaccca cagttgcggt aaagttgatg
     7501 cgtatgcctt cattgctgcg gttgctgatt tttacggcat ttgggctgac gcccaaggca
     7561 aacgcggcac gttcctgaag tttctggtcg gaaacggtta cattattgat tgagccgcaa
     7621 cctgctaatg ccaacgcaac gaacgcagcc gaaacgatga tgcgtgtgtt cataatttcc
     7681 tcgaaaatta aaaatgaaaa caggaaaacg attcttacgt gaagcagaaa aatgtcaata
     7741 gaattatatt tcccacttaa aatctggaaa gctgttctct atatttcaga cggtatatcc
     7801 cgcaaaatta aggtcggtaa tctatgccca actgcttcaa gatatggtcg aaggtttcgg
     7861 gcgtgtcgaa atgcaggatg attctgcctt ttttatggtt ggcggttttg atttcggcgt
     7921 tgacacccag tttttcagtc agcaaatcat tcaggcggcc gatgtcggcg gcggcagttt
     7981 ttttgggctc gggacgtttg ttttgaaggg cggcttggct gcggcgttcg acttcgcgca
     8041 ccgaccagcc gtttttgaca gccttttgcg ccaattcgag ctgttcgacg acgggcaggg
     8101 tcagcagtgc gcgggcgtgc cccatttcga ggcggcgttg gtaaagcatt tcctgcacgg
     8161 gttcgggcag gcttaaaagg cgcaggctgt tggaaatcgc gcttcggctt ttaccgacgg
     8221 cttgggcgat ggtttcgtgg gtcagcccga actcgtcggc aaggcgtttc aagccttgtg
     8281 cttcttcgat ggggttgagg ttttcgcgct ggaggttttc gatcaaaccc attgccaacg
     8341 cggtttcgtc gctgatggtt ttgataacgg cggggatttc ggtcaggccg gcaatctgtg
     8401 cggcacgcca acgccgctcc cccgcaatca gttcgtatcg ggacagtccg tgttcgcgca
     8461 cgatgacggg ctgtatcacg ccttgcgcct taatcgaatc tgccagctcc tgcaaggctt
     8521 cgtcatcgat ttgaacacgc gcctgatagc ggccgggccg gatatcttta accgcaaccg
     8581 tggtcaatcg gtcgccgctg ctgttgtctg cgccgttggc gagcagcgaa tccaaaccgc
     8641 gccccaatcc gccttttact tttgccatac cgccctcccg tgcctattca gataggatgt
     8701 taaatcggat attttatcgg atattgggtg ttgccgacaa tttgtatccg tatttatcgg
     8761 atttctgttt tttcactata atagccggtt tgccgttgca ggcggtttta tgggaaaggc
     8821 ggatgatggt acggcgtttg ataatcggca tcagtggggc gagcggtttc caatacggcg
     8881 tgaaggcttt ggaactttta cgcgcgcaag atatcgaaac gcaccttgtg gtatcgaaag
     8941 gtgcggagat ggcgcgcgct tcggaaacgg cttatgcgag agacgaggta tatgccctcg
     9001 cggacttcgt gcatccgatc ggcaatatcg gggcgtgcat tgccagcggt acgtttaaaa
     9061 cggacgggat gctggtcgcc ccctgttcga tgcggacgct tgcctcggtc gcgcacggct
     9121 tcggcgacaa cctcttgacg cgtgcggcgg atgtggtttt gaaggaaagg cggcggctgg
     9181 tgctgatggt gcgcgaaacg ccgctgaacc ttgcccattt ggacaatatg aagcgggtaa
     9241 cggaaatggg cggcgtggtg tttccccctg ttcctgcgat gtaccgcaaa ccgcagacgg
     9301 cggacgacat agtggcgcac agtgttgcac acgctttgtc gctgttcgga atcgatacgc
     9361 cggattcggc ggaatggcag ggaatggcgg attaaaggac aaaaatgccg tctgaacacg
     9421 gatacggttc agacggcatc attttatacg actgccttat ttggctgcgc cttcattcca
     9481 tgcggcaggg gatttgtagc cctcgaagcg tttgtgcgcg taggctttga acgcgtcgga
     9541 gttataggcc tcggttacgt ctttaagcca ttggctgtct ttgtcggcgg ttttgacggc
     9601 agaccagttg acataggcaa agctcggttc ttggaacagg gcttcggtca gcttcatgcc
     9661 gctgcttatg gcgtagttgc cgttgacgac ggcaaaatcc acgtcggcgc ggctacgcgg
     9721 cagttgcgcg gcttcaagct cgacgatttt gatgtttttc aggttctcgg cgatgtccgc
     9781 tttggatgcg gtcaacggat tgatgccgtc tttgagtttg atccaaccca gttcgtcgag
     9841 catcaccaag acgcgggcga agttggacgg gtcgttgggc gcggatacgg tgctgccgtc
     9901 tttgacttct tccagcgatt tcagcttgcc cgggtacagt cccaaaggcg cggtcggcac
     9961 ttggaagact tcggtgatgt ccagattgtg ttcttttttg aagtcgtcaa gatagggttt
    10021 gtgttggaag acgttgatgt ccaactcgcc ctcagccaat gccagattcg ggcgtacata
    10081 gtcggtaaac tcgaccagtt tgacggtgta gccttttttc tccagctcgg gttggatttg
    10141 ttctttgacc atatcgccga agtcgccgac ggtcgtgccg aagacgattt cttttttcgc
    10201 cgcgccgttg tcggcggcgg cagaagcgga tgcggcgggc gcgctgtctt tttgaccgcc
    10261 gcaggcggcg aggatgagcg cgagtgcggc ggcggaaagg gttttgaaga aggttttcat
    10321 attttctcct gatgttgtgg cggtttcaaa caaaaatgac gggcagggag tcctgccgtc
    10381 cggattcggc gttcagacgg catttgccgc gaacagggga attttatagc atttttcgga
    10441 tagcggtggg ggttttggcg ttcagacggc attttgggtt caacgtttgt cgagtttccg
    10501 cgccaacgtg ttgccggtgc tttgaatcag gataacgagc agcacgagga gggcgacgat
    10561 gaagacgatg acttcggttt ggtagcggta gtagccgtag cggatggcga ggtcgcccaa
    10621 gccgccgccg cctatcatcc ctgccgccgc gctgtatgac aaaagcccga tggcaagcac
    10681 ggtaatgctg gaaaccatgc ccgcgcgcgc ttcgttcaag aggactttgc agacgatggc
    10741 aatcggaggc gcacccatcg cggcggcggc ttcaatcacg cctttgggga cttcgcgcag
    10801 gttttgttcc accagtcggg caaaataaaa caatcccgac acgctcaaca ccagcgaggc
    10861 ggcaaccggg ccgatggtgc tgccgacgat ggcgcgtgtg gcgggtatca tcgcaatcat
    10921 caaaatgacg aaggggaagg cgcgcatgag gttgacgagg ttgtcgagca ggaagttcac
    10981 cggcttgttg taatgcagtt ggcggctgga agttacgaag agcaacacgc ccagcaacgt
    11041 gccgaaaacg acggcgaatg tggtggacaa accgaccatt acgaaggttt cgcccaatgc
    11101 gcggacgatt tcgcctttca taccgatgat gttggaaacg gtttgttcaa atgttaagcc
    11161 tgccatattc agtcctcccg aatcagttcg cgcccgatgt cggatcgggc gtggatttgg
    11221 ttgccgcgta cttcgacgat ttcgacgact ttgcctttat ccaacagggc ggcgcggtcg
    11281 cacagtcgtc tgataacgct catttcgtgg gttacgatga cgatggttac gttgaatcgt
    11341 ttgttgatgt cttccaaaca ttccaagacg ctgcgcgtgg tggcggggtc gagggcggaa
    11401 gtgggttcgt cggcgaggat gacttggggt ttgggcgcga gtgcgcgggc gatgccgaca
    11461 cgttgtttct gcccgccgga aagctgggcg ggatagtggc cggcgcgttc ggtcaagccg
    11521 acgatttcaa ggcattcttt aacgcgcgct ttgatttttt cagacggcca tccggcgatt
    11581 tccaaaggaa aggcgacatt gccggcgacg gtgcggttgt tcaacaggtt gaactgctga
    11641 aacaccatgc cgatattctg ccgcgcctga cgcaatgcgg cggcatcaag cgcggtcagc
    11701 tcttgtccgc agacgttgac cttgcccgtg tcggggcgtt ccaacaggtt aatcagccgc
    11761 aacagggtgg atttgcccgc gccggaatag cccatcagcc cgaagatttc gccgtcgcgg
    11821 atttcaaggc tggtcggctc gacggcggca aaacgggtct tgtcgcgcgt ttggtaatgc
    11881 ttggaaacct tgtccaaaat aatcattgtc tttcccatac aacaaagccc gatgcaggac
    11941 acaacgggcg cggaagataa agctgaaatt gtcggaacgc tttagctgtt atgcccgcaa
    12001 gctgtgtcaa atcggcaggt taattttcgt aggatattat cgggaaagca tttttttgtc
    12061 aataaagcag gaagcgggca accatttcgg acaatgccgt ctgaaacggg caaaggcagc
    12121 ggttcgcacc aaaacggcaa ataattgaaa
//
LOCUS       DAWKJW010000043        11962 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.043, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000043 DAWKJW010000000
VERSION     DAWKJW010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11962)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11962)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11962
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.043"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            188..622
                     /locus_tag="WJJ54_000876"
     CDS             188..622
                     /locus_tag="WJJ54_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HEZ7341762.1"
                     /translation="MNFALSVITFTLASFLPVPPAEAAVFTWKDGGGNSYSDVPKQLH
                     PDQSQILNLRTRQTKPAVKPAQADAGKRTDGAAQENNPDTAEKNRQLEEEKKRIAETE
                     RQNKEENCRISKMNLKAVGNSNAKNKDDLIRKYNNAVNKYCR"
     gene            complement(671..2014)
                     /locus_tag="WJJ54_000877"
     CDS             complement(671..2014)
                     /locus_tag="WJJ54_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEZ7341763.1"
                     /translation="MFHSVNVFTGETLYRRPAQDYAEFERRLADLKMRGGAFAQLGVT
                     ERAARLQKFADRLEAEKERFAEMVCEEVGRCLHECRAEIGKSIELIRYYARLAPELLA
                     HKTIATQASLSQVRFEPLGVVFAVMPWNYPVWQVLRFAVPAMCAGNACAVKPAPSVAR
                     VSQALFDLASDGIPLAGVWLDEAGTLKAVEDTDAMAFTGSTHTGRILAAHAGANLKKT
                     VLELGGSNAFIVMPDADLERAAAEACYSRFRDAGQSCNAAKRIIVTEAAADRFITLFL
                     AECAKLKMGDPKHPDTTLAPLHREDLRDRVHGQVEDAVSNGAVCLTGGKIPQGRGWFY
                     PATVLDRVNPACRVWREEVFGPAALILRAENEEHAIALANDSPFGLGACIYTADTERA
                     WRFAEKIQAGSVFINRHTSSDLRLPFGGVKDSGYGRELSEFGLYEFVNVKTYWQK"
     gene            complement(2019..2672)
                     /locus_tag="WJJ54_000878"
     CDS             complement(2019..2672)
                     /locus_tag="WJJ54_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEZ7341764.1"
                     /translation="MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVAR
                     TAAVAVFAVIAVFALIGGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNL
                     GAQPETGQARPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYGDIALIIAAGL
                     VVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG"
     gene            2823..3113
                     /gene="gatC"
                     /locus_tag="WJJ54_000879"
     CDS             2823..3113
                     /gene="gatC"
                     /locus_tag="WJJ54_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEZ7341765.1"
                     /translation="MALTLADVDKIARLSRLHLTAAEKEKSLQELNDIFTMVEQMQTI
                     NTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAGAPEVRNRLYIVPQVIEE"
     gene            3176..4621
                     /gene="gatA"
                     /locus_tag="WJJ54_000880"
     CDS             3176..4621
                     /gene="gatA"
                     /locus_tag="WJJ54_000880"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEZ7341766.1"
                     /translation="MTQYTLKQASVLLQSKQISAVELASAYLAAIAEKNPALNGYITI
                     DQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTA
                     TVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVA
                     ARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQTGPMAQTAE
                     DCAILLNAMAGFDPKDSTSLEREKEDYTRDLNQPLKGLKIGLPKEYFGEGNSADVLTA
                     LQNTIDLLKAQGAELIEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFA
                     DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFAR
                     CDLILAPTAPTAAPKIGADASPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGV
                     QLVGNYFAEAKILGAAHQIQLNSDWHGKRPE"
     gene            4618..5550
                     /locus_tag="WJJ54_000881"
     CDS             4618..5550
                     /locus_tag="WJJ54_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HEZ7341767.1"
                     /translation="MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFE
                     QFVNASPIRQGLFLHCPQNAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILH
                     QMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHL
                     LTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQV
                     KLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLADIESKKRSMYRKRYE
                     MLDNMVAEMKDGLKTEARGISDGIQTEKPLRRTA"
     gene            5593..7023
                     /gene="gatB"
                     /locus_tag="WJJ54_000882"
     CDS             5593..7023
                     /gene="gatB"
                     /locus_tag="WJJ54_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEZ7341768.1"
                     /translation="MTWETVIGLEIHVQLNTKSKIFSGASTAFGAEPNAHAGVVECAL
                     PGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEH
                     GKLEIVVGDDVKTINVTRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMR
                     SAAEAVAYAKALHSLVTWLDICDGNMAEGSFRVDANVSVRPKGQAEFGTRREIKNLNS
                     FRFLEQAINYEVEAQIEILEDGGKVQQATMLFDPEKGETRVMRLKEDAHDYRYFPDPD
                     LLPVIISDAQMQKAKAEMPELPKEMAARFVADYGVSEYDARLLTASRAQAAYFEEAAK
                     ESGQGKPTANWMNGELAATLNKAGLELADSPITAPRLAALVGKIADGTLSGKLAKKAF
                     EAMWAEPEATIAEIIEKHGLQQMTDTGAVEAMVDEVLANNAKAVEQFKSGNEKALNAI
                     VGQVMKASKGKANPAQVQELIKAKLA"
     gene            7115..8125
                     /locus_tag="WJJ54_000883"
     CDS             7115..8125
                     /locus_tag="WJJ54_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster binding
                     domain-containing protein"
                     /protein_id="HEZ7341769.1"
                     /translation="MNHTVTLPDQTTFAAGDGETVLAAAARQNLNLPHSCKSGVCGQC
                     KAELVSGDIQIGGHSEQALSEAEKAQGKILMCCTTAQSDISLNIPGYKADALPVRTLP
                     ARIESMVFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANSPDQEGILE
                     LHIRRRENGVCSEMIFGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILLATGTGYAP
                     IRSILLDLIRQDSGRAVHFYWGARHQDDLYALEEAQGLACRLKNACFTPVLSRPGEGW
                     QGRKGHVQDIAAQDHPDLSEYEVFACGSPAMTEQAKNLFVQQHKLPENLFFSDAFTPS
                     AS"
     gene            complement(8254..8886)
                     /gene="pdxH"
                     /locus_tag="WJJ54_000884"
     CDS             complement(8254..8886)
                     /gene="pdxH"
                     /locus_tag="WJJ54_000884"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEZ7341770.1"
                     /translation="MDLHNIREDYSKRELSEGDCADNPIEQFERWLDEAVRAQVNEPT
                     AVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLDAHPFAAMTFFWPELE
                     RQVRVEGRVERLSEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKH
                     PLHVPRPPHWGGYIVIPDLLEFWQGRPSRLHDRIQYRLLDGGWIRERLSP"
     gene            9117..10166
                     /locus_tag="WJJ54_000885"
     CDS             9117..10166
                     /locus_tag="WJJ54_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEZ7341771.1"
                     /translation="MSKQPTSKRQWRDGVAPSAKKTAKPFKSKARPKDETGKTASQPY
                     GQKASDGIKPQNLPKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRMEPERLQKV
                     LAASGVGSRREMEEWINNGWVTVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRI
                     ILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQ
                     RFAHPSFEVEREYAVRVLGGLTGEQMRVLTEEGVMLEDGLAKVERIREQGGEGANKWY
                     NVVIKEGRNREVRRIFESQGLTVSRLVRVGFGPIGLPNRLKRGQFYELNPAEVANIIK
                     WADMLLPGERRRKKA"
     gene            complement(10235..11776)
                     /locus_tag="WJJ54_000886"
     CDS             complement(10235..11776)
                     /locus_tag="WJJ54_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HEZ7341772.1"
                     /translation="MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPL
                     TKLIGITESAAGDWKLTTVGWIFSIALAMLGASAALFGTWMERVGPRKAIFAAACCFS
                     LGFFVSAFGVSTHNLFLLYLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIM
                     GFGGGAMLASPLSVSLMNAFSNAASVGVVETFAVLGLLYLALMMFGAFTIRVPADGWK
                     PEGYTAPKTQNKLVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQEL
                     FSETSVGRQASVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLL
                     YFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAW
                     STAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMACLLIIGLLCNLAVKSVHEKHH
                     EKDIKTAAHSGNPDDETAISDAYLVGEKVSGGGISVWWRWALAVIPLAYGVVMIFVKA
                     LDLFS"
BASE COUNT         3058 a         3648 c         2963 g         2293 t
ORIGIN      
        1 tctgcggctt cgtcgccttg tcctgatttt tgttaatcca ctatattttt gggaatctgt
       61 tttaccccaa tatataaagc accatattaa ggcggagttt cttccccact ttgaaccgaa
      121 cccggaaaag acaccgccca agccaatcct gatgctgccc cggcagccaa ccatcaagga
      181 aaccctaatg aactttgctt tatccgtcat cacatttacc ctcgcctctt tcctgcccgt
      241 cccgcccgcc gaagccgccg tctttacttg gaaggacggc ggcggcaaca gctattcgga
      301 tgtgccgaaa cagcttcatc ccgaccagag ccaaatcctc aacctgcgga cgcgccaaac
      361 caaaccggcg gtcaaacccg cccaagccga cgcagggaag cgcacagacg gcgcggcaca
      421 ggaaaacaat cccgacactg ccgagaaaaa ccggcagctt gaggaagaaa agaaaagaat
      481 tgccgaaacc gaacggcaga acaaagaaga aaactgccgg atttcaaaaa tgaacctgaa
      541 agcggtggga aattcaaatg caaaaaacaa ggatgatttg attcggaaat acaataacgc
      601 cgtaaacaaa tactgccgtt aatcggctct agcgcaaacc ccatgccgtc tgaaacggca
      661 cggggtttgt ttatttctgc cagtaggttt tgacgttgac gaactcgtac agcccgaatt
      721 cggacaattc gcgcccgtaa ccggaatctt tgactccgcc gaaaggcagg cgcaaatcgc
      781 tgctggtatg gcggttgata aacaccgatc ccgcctgtat tttttcggca aaccgccaag
      841 cgcgttcggt atcggcggta taaatgcagg cacctagccc gaacggggaa tcattggcaa
      901 gggcgatggc atgttcttcg ttttcggcgc gcaaaatcag ggcggccggc ccgaatactt
      961 cttctctcca gacgcggcag gcaggattta ccctgtctaa aaccgtcgcg ggataaaacc
     1021 agcctcgccc ttgtgggatt tttccgccgg tcaggcatac cgcgccgttt gaaacggcat
     1081 cttcaacctg cccgtgaacc ctgtcccgca aatcttcgcg gtgcagcggt gcaagcgtag
     1141 tatcgggatg tttggggtcg cccattttca atttggcgca ttcggcaaga aacagcgtga
     1201 taaaacgatc ggctgcggct tcggttacga tgatgcgttt ggcggcgttg cacgattgcc
     1261 ccgcatcgcg gaaacgggaa taacaggctt ctgcggcggc gcgttccaaa tcggcatcgg
     1321 gcatcacgat aaaggcgttg ctgccgccga gttccaagac ggttttcttg aggtttgcgc
     1381 ccgcatgtgc cgcaaggatg cgccccgtat gcgtcgagcc ggtaaacgcc atcgcatcgg
     1441 tatcttcaac cgccttgagc gtgcccgcct catccagcca cacgcctgcc agaggaatgc
     1501 cgtctgaagc caaatcgaac agtgcctgac tgacgcgtgc cacgctgggc gcgggtttga
     1561 cggcgcacgc gttgcccgcg cacatagcgg gaacggcgaa acgcaatacc tgccagacgg
     1621 gatagttcca aggcatgacg gcaaacacca cgcccaaagg ctcgaagcgc acctgactca
     1681 aactcgcctg cgtcgcgatg gttttgtggg caagcagttc gggggcaagg cgggcgtaat
     1741 agcgtatcag ttcgatagac ttgccgattt ccgcacggca ttcgtgcaag cagcgtccga
     1801 cttcctcaca caccatttcc gcaaaacgct ctttctccgc ctccaaacgg tcggcaaatt
     1861 tttgcaggcg cgcggcacgt tcggttacgc ccagttgcgc gaacgccccg ccgcgcattt
     1921 tcaaatccgc cagccgccgt tcaaactccg cataatcttg agctggacgg cggtaaagcg
     1981 tttcgcccgt aaatacattg acactgtgaa acatcgaatc aacctgccag ttgcgggaat
     2041 atcgttttca gtcccgacac aataatctcc accgataccg ccgccagcat catacccata
     2101 atgcggttta aaatcgtcag ccccgtcgcg cccagcaggc ggctgacctt cccggcaacg
     2161 attaaaatgg cataacaaat cgcactgacc accaaaccgg ccgcgataat caacgcgatg
     2221 tcgccgtatg ttttagccgc cgaagcgtaa ataatcacgg tcgaaatacc gcccgggccg
     2281 atggtgatcg gtatggcgat gggcacgacg gcaatcgctc cggcattgcg ggcggggcgc
     2341 gcctgccccg tttccggctg cgcgccgaga ttctgcttgg cgggattgtc gttgccgttc
     2401 atcatagaaa tggcaatcag caacaccaaa attccgccgc cgacctgaaa cgaaccgacg
     2461 ctgatgccca aaaccttcag cagcgtaccg ccgatcagcg caaataccgc aatcacggca
     2521 aacacggcaa cggcggccgt ccgcgcgacc ttcctgcgct ccttcgtgct gtgcccgttg
     2581 gtcaggtcaa ggtaaagcga caacgcgcta aacggattga tcagcaccaa aaaagccaca
     2641 atcagcttgc cgatttccat gcccaatccc attatttccc cctccttcaa acccgtgcgg
     2701 caggcatccg atgctgcaaa ttgccgccgc aacggatttt tccgttataa ttaaaaattc
     2761 aagcaatacg ccccatcata cccgaacgac ggtatcttta ccatcagaca aggatgcttt
     2821 tcatggcact gacacttgcc gacgtagaca aaatcgcccg actctcccga ctgcacctga
     2881 ctgcggcaga aaaagaaaaa tcgcttcaag aattaaacga cattttcact atggtcgaac
     2941 agatgcaaac cattaacaca gacggcatcg aaccgatggc gcacccgcac gaggccgccc
     3001 tgcgcctgcg cgaagacgaa gtaaccgaaa ccgaccgcgc cgccgaatat caggcgggtg
     3061 ctccggaagt acgcaaccgt ctgtacatcg taccgcaagt tatcgaagaa taatccgaat
     3121 atgcttcaga cggcatcagc aataccgccc gaagcccttt aaggatggaa gatttatgac
     3181 ccaatacaca ttgaaacagg caagcgtcct gttgcagtcc aaacagattt ccgccgtcga
     3241 actggcaagc gcataccttg ccgccatcgc cgaaaaaaat cccgccctca acggctatat
     3301 caccatcgac caagataaaa cccttgcaga agcccgtgcc gccgacgaac gtatcgcgca
     3361 gggcaacgcc tccgcgctta ccggcgtacc cgtcgcctac aaggatattt tctgccaaac
     3421 cggctggcgc agcgcgtgcg cttccaaaat gctcgacaac ttcatctccc cctacaccgc
     3481 caccgtcgtc caaaacctgc tcgacgaagg tatggtaacg ctcggccgca ccaatatgga
     3541 tgagttcgct atgggttcga ccaatgaaaa ctcattctac ggtgcagcca aaaacccatg
     3601 gaatcttgag cacgtccccg gcggttcgtc aggcggttcc gccgccgtcg ttgccgcgcg
     3661 cctcgcccct gccgcgctcg gttcggacac cggcggctct atccgccaac ccgcatcgca
     3721 ctgcggcatt accggcatca aacccacata cggcacggtt tcccgcttcg gtatggtcgc
     3781 ctacgcctcc agcttcgatc aaaccggccc gatggcgcaa actgccgaag actgcgcgat
     3841 tctgttaaac gcgatggcag gtttcgaccc caaagactcc accagcctcg agcgcgaaaa
     3901 agaagactac acccgcgatt tgaaccaacc gctcaaaggt ttgaaaatcg gcctgcccaa
     3961 agaatatttc ggcgaaggca acagcgccga tgttctgacg gcattgcaaa acaccattga
     4021 tttgctgaaa gcccaaggcg cggaattgat tgaagtttcc ctgccgcaaa ccaagctgtc
     4081 catccccgcc tactacgtcc tcgcctccgc agaagccagc accaaccttt cacgttacga
     4141 cggcgtacgt tacggacacc gtgccgccca attcgccgat ttggaagaaa tgtacggcaa
     4201 aacccgcgcc gaaggtttcg gcagcgaagt caaacgccgc atcatgatcg gcacttatgt
     4261 actgtcgcac ggctactacg atgcctacta tctcaaagcc caaaaactgc gccgcctcgt
     4321 tgccgatgat tttcagacgg catttgcacg gtgcgacctc atcctcgcgc cgaccgcacc
     4381 cactgcagcc ccaaaaatcg gagcggatgc ttcgccggtt gaaacctact tgagcgatat
     4441 ctacaccatc gccgtcaacc tcgccggact gcccgcattg accctgcccg caggcttcag
     4501 cggcggcgga ctgcccgtcg gcgttcagct tgtcggcaac tacttcgccg aagccaaaat
     4561 cctcggtgcg gcgcatcaaa tccaactcaa cagcgattgg cacggcaaac gacccgaatg
     4621 aagcagaacc gcacctttac cttccccgat tttcgcaccg tttacagcta tgcgccttta
     4681 tatcggctgc aacatttaaa atacacattg cgaaaatttt tcggaaaaaa agaaatttac
     4741 gccttcgagc agtttgtcaa cgcctcccct atccgtcagg ggctgttcct ccactgcccg
     4801 caaaatgcct atccgctgct gcgcgaattt gttgacaggc gttttaactg caaacgccgt
     4861 ttagatgcga tgacggcaga ttttctcatg gcggaaaaac tgttcggcac agacatcctg
     4921 caccaaatgg aagactaccg cttccatttg gtcttggcgc acctttcaga cggcatcagc
     4981 ttgtggctca accgcaacga caactgcgtc gaagaaggcg cgtggtcttt atctttgcgc
     5041 gacgaagcag gcaaccggct gtatatggcg actttcgcct ttgtcggcac acacctgctg
     5101 acagcctccg tacaagggcc tgcgggtgaa gaagccaaag acactgtccg ccgcataacc
     5161 aaacaacttc acggcttgcg tccccaacaa ctgatggtaa ccgccctgca atatttcgcc
     5221 gccgtactcg gcttggacgg cgcaatgggc attgcacaaa aacatcaggt caaactgcgc
     5281 tggaaactta aaaagcgtgt caaaatgaat tacgacgcat tctggcagga atacggcgca
     5341 agtttggaac gggacggcta ctggcatctc ccccaaaccc ccgcccgcaa agaccttgcc
     5401 gacatcgaaa gcaaaaaacg ctcgatgtac cgcaagcgtt atgaaatgct ggacaacatg
     5461 gttgcagaga tgaaggacgg tctgaaaaca gaagcacgcg gcatttcaga cggcatccaa
     5521 acggaaaaac cgctccgccg gacagcctga cgcgaagact atcgaattga tattttagag
     5581 aaagaagctc ttatgacctg ggaaaccgta atcggcttgg aaatccacgt ccaattgaac
     5641 accaaatcca aaatcttcag cggcgcatcg accgcattcg gcgcagaacc caacgcgcac
     5701 gccggcgtgg tggaatgtgc tttgccgggc gtactgccgg taatgaaccg tgaagtcgtt
     5761 gaaaaagcca tcaaattagg cttggctttg gatgcgaaaa tcaaccggaa aaacgtgttc
     5821 gaccgtaaaa actacttcta tcccgactta ccaaaaggct atcaaatcag ccagttggac
     5881 ttaccgattg tcgaacacgg caaattggaa atcgtagtcg gcgacgatgt gaaaaccatc
     5941 aacgtaaccc gcgcccatat ggaagaagac gcgggcaagt ccgtacatga aggcttgaac
     6001 ggcgcgaccg gtatcgacct gaaccgcgcc ggcacgcctt tattggaagt ggtgtccgaa
     6061 cccgaaatgc gctccgccgc cgaagccgtt gcctacgcca aagccttaca cagcttagta
     6121 acctggctgg acatttgcga cggcaatatg gcggaaggtt cattccgcgt cgacgcaaac
     6181 gtatccgtgc gtccgaaagg tcaagcagag ttcggcacgc gccgcgagat taaaaacctc
     6241 aattccttcc gctttttgga gcaggcaatt aattacgaag tggaagcgca aatcgagatt
     6301 ttggaagacg gcggcaaagt acagcaggca accatgctgt tcgaccctga aaaaggtgaa
     6361 acccgcgtga tgcgcttgaa agaagacgcg cacgactacc gctacttccc cgaccctgat
     6421 ttgctgcccg tcatcatttc agacgcccaa atgcaaaaag ccaaagcaga aatgcccgag
     6481 ctgccgaaag aaatggcagc gcgtttcgtg gcggattacg gcgtgtccga atacgacgcg
     6541 cgcctgctca ccgcaagccg cgcacaggcc gcctattttg aagaagccgc caaagagagc
     6601 ggacaaggca agccgactgc caactggatg aacggcgaac tcgccgccac gctgaacaaa
     6661 gccggcctgg aacttgccga cagcccgatt accgccccgc gcctcgccgc gctggtaggc
     6721 aaaatcgccg acggcacatt aagcggcaaa ctggcgaaaa aagcctttga agccatgtgg
     6781 gcagaacccg aagccaccat tgccgaaatc atcgaaaaac acggtttgca acagatgacc
     6841 gataccggcg cggttgaagc gatggtggac gaagtgctag caaacaacgc caaagccgtg
     6901 gaacagttta aatccggcaa cgaaaaagcc ctgaatgcga ttgtgggaca agtgatgaaa
     6961 gccagcaaag gcaaagccaa ccccgcgcaa gttcaagaac tgattaaagc caaacttgcc
     7021 tgataagcaa gatgccgtct gaaacccaga tccgacgttc agacggcgtt ttcacagtct
     7081 gtccacatta aaacagcata aaaaacaata ttccatgaac cacaccgtta ccctgcccga
     7141 ccaaaccacc tttgccgccg gcgacggtga aaccgttttg gccgctgccg cccgtcaaaa
     7201 cctcaatctg ccccattcct gcaaaagcgg tgtctgcggg caatgcaaag ccgaactggt
     7261 cagcggcgat attcaaatag gcggacactc ggaacaggct ttatccgaag cagaaaaagc
     7321 gcaaggcaag attttgatgt gctgcaccac tgcgcaaagc gacatcagcc tcaacatccc
     7381 cggctacaaa gccgatgccc tacccgtccg caccctgccc gcacgcatcg aaagtatggt
     7441 tttcaaacac gatgtcgccc tcttgaaact tgccctgccc aaagccccgc cgtttgcctt
     7501 ctatgctggg caatacatcg atttactgct gccgggcaac gtcagccgca gctactccat
     7561 cgccaattcg cccgaccaag aaggcatttt ggaactacac atccgcaggc gcgaaaacgg
     7621 tgtctgctcg gaaatgattt tcggcagcga acccaaagtc aaagaaaaag gcatcgtccg
     7681 cgttaaaggc ccgctcggtt cgtttaccct gcaggaagac agcggcaaac ccgtcatcct
     7741 gctggcaacc ggcacaggct acgcccccat ccgcagcatc ctgctcgacc ttatccgcca
     7801 agacagcggc cgcgccgtcc atttctactg gggcgcgcgt catcaagatg atttgtatgc
     7861 cctcgaagaa gcacaagggt tggcatgccg tctgaaaaac gcctgcttca cccccgtatt
     7921 gtcccgcccc ggagagggct ggcagggaag aaaagggcac gtacaagaca tcgcggcaca
     7981 agaccacccc gacctgtcgg aatacgaagt atttgcctgc ggctctccgg ccatgaccga
     8041 acaagcaaaa aatctgtttg tgcaacagca taagctgccg gaaaacttgt ttttctccga
     8101 cgcattcacg ccgtccgcat cataattccc cggtataaaa aagattcagg ctttccgttc
     8161 ggaacacaaa aaacttcccg tccgtatttt ccccataaaa aatgccgtct gaaacccaat
     8221 tccggctttc agacggcata tgttttttcc tgttcaaggc gacagccgct cgcgtatcca
     8281 gccaccatcc agcaaacggt attggatgcg gtcgtgcagc ctgctcggcc tgccctgcca
     8341 gaactcaagc aaatcgggaa tcacaatata gccgccccaa tgcggcggac gcggcacatg
     8401 cagaggatgt ttgagtccga ccgccgccgc ctttgccacc aataccgcct tgttcggaat
     8461 cacctcgctc tgcgcgcttg cccacgcacc caaacggctc tgatacgggc ggctctcaaa
     8521 atattcgtcc gacaacttct ccgacagcct ttcaacacgc ccttccacgc gcacctgacg
     8581 ctccagctcc ggccaaaaaa acgtcatcgc cgcaaatgga tgagcatcca gcgaacgtcc
     8641 cttacggctg tgataattcg taaagaaaac aaaaccttca gaattaactt ccttcagcag
     8701 caccatacgg ctgttgggtc tgccgcgtcc gtcgaccgcc gccacattaa ccgccgtcgg
     8761 ctcgttgacc tgtgcgcgta ccgcctcgtc caaccaccgc tcgaactgct cgatcggatt
     8821 gtcggcgcaa tcgccttccg acaattcccg tttactgtaa tcttcccgaa tattgtgcaa
     8881 atccatttac cgctcctctt gtcatttgaa agattctacc cccgcacgca aaccgatttc
     8941 aaccgttgca caaactttgc ctcgcttctc caaacctcag gacacaacga tttcatccgc
     9001 aaaaccgccg cataaggtac aatatcgaac cgtccgaccg agggcggcat tttatcaacc
     9061 cgtcctgccg cacacgccgc agaagaaccg ccttatcagg cgagttagga aaaatgatgt
     9121 ccaaacagcc caccagcaaa cgccaatggc gcgacggcgt agccccgtct gccaagaaaa
     9181 ccgccaaacc tttcaaaagc aaagcccgtc ccaaagacga aacgggcaaa accgcatccc
     9241 aaccttacgg acaaaaagct tcagacggca tcaaacctca aaacctcccc aaacagcgcg
     9301 ccgccaaagc caaaaaactc gtcgtccgca atcccaacca aaaaattatg gaacacgcgc
     9361 gcgatttaaa agaacgccgc agcgacctat cgcgcatgga acccgaacgc ctgcaaaaag
     9421 tgcttgccgc gtccggcgtc ggctcgcgcc gcgaaatgga agaatggatc aacaacggct
     9481 gggtaacggt caacggcaaa accgcgcaac tgggcgacaa agtcaccccc gacgaccacg
     9541 ttaccgtcaa aggcagcatc atcaaactca aatgggccga ccgcctgccg cgcatcatcc
     9601 tatattacaa acaagaaggc gaaatcgttt cccgcgacga cccgcaaggc cgcgtcagca
     9661 tattcgaccg cctgccgcag gccgccagca gccgctgggt cgccatcgga cgcttggaca
     9721 tcaacaccag cggacttctg attctcacca cctccggcga actcgtccaa cgtttcgccc
     9781 accccagctt cgaagtcgaa cgcgaatacg ccgtgcgcgt actgggcggg ctgaccggcg
     9841 aacaaatgcg cgtcctcacc gaagaaggcg tgatgctcga agacggcttg gcaaaagtcg
     9901 aacgcatccg cgaacaaggc ggcgaaggcg cgaacaaatg gtacaacgtc gtgattaaag
     9961 aaggccgcaa ccgcgaagtg cgccgcattt ttgaaagcca aggactcacc gtcagccgcc
    10021 tcgtgcgcgt cggcttcggt cccatcggac tgcccaaccg cctcaaacgc gggcagttct
    10081 acgaactcaa ccccgccgaa gtcgccaaca tcatcaaatg ggcggacatg ctgctgccgg
    10141 gcgaacgccg ccgcaaaaaa gcctaaaccc gccaaaacac aaaaatgccg tctgaaacat
    10201 ctactgtttc agacggcatt ttgttcgggc gttttcagga gaaaaggtcg agtgctttga
    10261 caaagatcat caccacgccg taggcgagcg gtatgacggc caatgcccaa cgccaccaga
    10321 ccgatatgcc gccgccggaa actttttcgc ccacaaggta agcgtcggat atggcggttt
    10381 cgtcatcggg gttgccgctg tgtgcggcgg ttttgatgtc tttttcgtgg tgtttttcgt
    10441 gtacggattt gacggcgagg ttgcacaaca aaccgataat cagcaggcac gccatgatgt
    10501 acatggttac gctgtatgcc tgtgccgccg gtatgccgct gtcgatttgg ctttggcgta
    10561 tgtaattgac cagtaccggg ccgatgacgg cggcggttga ccaggccagc aggatgcgcc
    10621 cgtgaatcgc gccgacctga taggtgccga acaggtcttt caggtaggcg ggaatggcgg
    10681 caaatccgcc gccgtacatg gaaataatca cgcaaaagcc gatgatgaac agggctttgc
    10741 tgccgccctc gccgatggag ggaacggcga aatacagcag cgaaccgagt acgaagaaaa
    10801 tggtgtaggt gtttttgcgt ccgattttgt cggaaacgct cgaccataaa aagcgtccgc
    10861 ccatgttaaa caggctcagg aggctgacga agcctgccgc cgcacctgcg ccgactgacg
    10921 cctgcctgcc tacggaggtt tcggaaaaga gttcctgaat catcacggat gcctgaccca
    10981 atacgccaat gccggcggtt acgttcaggc acaataccca gaacaacagc caaaattgcg
    11041 gcgttttcat ggcttgtgac acgttgacat gattgctgct gaccagcttg ttttgcgttt
    11101 tcggcgcggt atagccttca ggtttccagc cgtcggcagg tacgcggatg gtaaacgcgc
    11161 cgaacatcat cagtgcgagg taaagcaggc ccaatacggc gaaggtttca acaaccccga
    11221 ctgaagcggc gtttgaaaag gcgttcatca gtgatacgga aagcggagag gccagcattg
    11281 cgccgccgcc gaaacccata atcgccaaac cggtcgccat acccggcttg tcgggaaacc
    11341 atttcatcag tgtggaaacc ggcccgatgt agcctaagcc taagcctacg ccaccgatga
    11401 cgccgttgcc caaataaagc aggaagaggt tgtgcgtact cacgccgaat gcggatacga
    11461 agaagcccag gctgaaacag caggcggcgg caaatatggc tttgcgcggc cctacccgtt
    11521 ccatccatgt gccgaacagg gcggccgacg cgcccagcat cgcgagtgcg atactgaaaa
    11581 tccaacctac ggtcgtcagc ttccaatctc cggccgccga ttcggttatg ccgataagtt
    11641 tggtcagtgg cgcgttgaat acggaatagg cgtaaatctg cccgatggca aggtgtaccg
    11701 ccaatgctgc gggcggtacg agccaacggt tgaaacccgg cttggcaatg cttgcctcac
    11761 ggtctaaaaa cttcataaca tcctctttct gtcagttgaa aaataaaatt tcatttgctc
    11821 aatggaaact tattgaaaac tataaaaaaa tatcggatcg gttttttatc cgccccaaga
    11881 tgccccgtct gaaacatttc gggtgtacgg aaaggtttct gttttttccg acaaattcct
    11941 gcggcttttc gcttccggat tc
//
LOCUS       DAWKJW010000044        11764 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.044, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000044 DAWKJW010000000
VERSION     DAWKJW010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11764)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11764)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11764
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.044"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            138..974
                     /gene="cysT"
                     /locus_tag="WJJ54_000887"
     CDS             138..974
                     /gene="cysT"
                     /locus_tag="WJJ54_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HEZ7341773.1"
                     /translation="MLLLKTPGVLPGFKLSLGLTVLCLSLLVVLPFAMMAAKAAEIGW
                     GGFWNTIAEPNVLAAVWLSLRMSFYAMLTNVVFGTLVAWVLVRYEFPGKGLANALVDL
                     PFALPTAVTGIALATLYAPNGWIGRFFEPLGIKIAFTPVGIWIALVVVSLPFIVRAVQ
                     PVLEELSGEYEEAAATLGANRFTTFRRVLLPEITPALLTGAGMMFARATGEYGSVIFI
                     AGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLVSFVILFALNVMQWALGRRSGA
                     KG"
     gene            1229..2089
                     /gene="cysW"
                     /locus_tag="WJJ54_000888"
     CDS             1229..2089
                     /gene="cysW"
                     /locus_tag="WJJ54_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HEZ7341774.1"
                     /translation="MKPYSANPNLTEPRRLRVLLIAAALGFLLLMLVVPLVAVFYEAL
                     KGGWDLYLKSLNDPEAWSAIKLTLITALIVVPVNAVLGVAMAWLLTRFDFRGKQLLTT
                     LLDLPFSVSPVVAGLMFVLLFGAHTALGGWLEAQGIQIIFAIPGIILATLFVTFPFVA
                     REIIPLMQAQGDSEEQAALILGASGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGA
                     VSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGVLALLALATLAVQNIITKLQDK
                     KLAAAERNTV"
     gene            2086..3159
                     /locus_tag="WJJ54_000889"
     CDS             2086..3159
                     /locus_tag="WJJ54_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HEZ7341775.1"
                     /translation="MSITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTL
                     LRIIAGLENADGGQILFDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVL
                     PKSERPSKGQIRAKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLL
                     DEPFGALDAKVRKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQT
                     GSAEAIYRKPENAFVTEFLGETDAFEGRIEKGFWHYSGFAWKLDAQYKWQEQTATGYI
                     RPHEWQIAAEHETPMICAEIEKVHAVGALTHILVKHGKQDVHITLAGSDAARYPIAEG
                     KALKLIPKQVYVFSQNELIEYSI"
     gene            complement(3216..4742)
                     /gene="ilvA"
                     /locus_tag="WJJ54_000890"
     CDS             complement(3216..4742)
                     /gene="ilvA"
                     /locus_tag="WJJ54_000890"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HEZ7341776.1"
                     /translation="MNTPLPYSDYLIRILTASVYDVAVETPLEPARSLSVRLKNNILL
                     KREDLQPVFSFKIRGAYNKMSKLPKDALACGVIAASAGNHAQGVALSAQRLGCRAVIV
                     MPETTPKIKVDAVKSHGGEVVLRGVSYNDAYDYAMELAEKEGLTYIAPFDDPDVIAGQ
                     GTVGMEIVSQHPDPIRAVFVPIGGGGLAAGVAAFIKQVRPEIKVIGVQTNDSCCMKQS
                     VEAGEIVHLKDVGLFSDGTAVKVVGDETFRLCKELLDEIITVDTDAVCGAVKDIFDDT
                     RSITEPAGALALAGLKAYIAREGAENQTLIAVTSGANMNFHRLRHVSERSELGEGNEG
                     IFAVTIPEERGSFLKFVNILGNRNITEFNYRYGDDEKAHIFVGLQAAGPQDLAVIGSR
                     LDEAGLPNVDLTDDEIAKIHIRYMVGGRTDKVENERLVSFEFPERPGALARFLNHMQG
                     GWNITLFHYRNHGADYGRILVGIDVPPHDAAAFDGFLESLGYSYHEETQNAAYKLFLA
                     "
     gene            4890..6059
                     /locus_tag="WJJ54_000891"
     CDS             4890..6059
                     /locus_tag="WJJ54_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEZ7341777.1"
                     /translation="MTAHKILPVLLSIILGVSHATAASPAPNRPTVHAAPTLQTPETL
                     TAAHIVIDLQSRQTLSAKNINTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPES
                     AWASEGSRMFVRPGDTVGTDKLLKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEA
                     RRLGMKNTVFKNPTGLSREGQVSTAKDLALLSEALMRDFPEYYPLFSIKSFKFKNIEQ
                     NNRNILLYRDNNVNGLKAGHTESGGYNLAVSYTGNGRHILVITLGSESAETRASDNSK
                     LLNWALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKTAEQIL
                     ETIQPIPAPVKKGQILGKIKIRQNGYTIAEKEIVALENVKKRSRWQRLWMRLTGQ"
     gene            complement(6184..6756)
                     /locus_tag="WJJ54_000892"
     CDS             complement(6184..6756)
                     /locus_tag="WJJ54_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEZ7341778.1"
                     /translation="MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVD
                     HKTVFYALEKESFHTALIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVR
                     IRVPLHIVNAENSQAVKLQGGRVSLLNTTVEVLALPANIPAFLDLDCAEVVAGDILHL
                     SDIKLPEGVESVSLKRNENLAVATVTGKKR"
     gene            complement(6823..7806)
                     /locus_tag="WJJ54_000893"
     CDS             complement(6823..7806)
                     /locus_tag="WJJ54_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEZ7341779.1"
                     /translation="MAAYDSLMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVA
                     VELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDR
                     RPRSVRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIK
                     QQRIENLTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGRTC
                     LIVDDMIDTANTLCKAAVALKERGAERVLAYASHAVFSGEAVSRIASSEIDQVVVTDT
                     IPLSEAAKNCDRIRQVTIAGLLAETVRRISNEESVSYLFNEEVMTGSMLLP"
     gene            complement(7973..8048)
                     /locus_tag="WJJ54_000894"
     tRNA            complement(7973..8048)
                     /locus_tag="WJJ54_000894"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8013..8015),aa:Gln,seq:ttg)
     gene            complement(8057..8132)
                     /locus_tag="WJJ54_000895"
     tRNA            complement(8057..8132)
                     /locus_tag="WJJ54_000895"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8097..8099),aa:Gln,seq:ttg)
     gene            complement(8145..8220)
                     /locus_tag="WJJ54_000896"
     tRNA            complement(8145..8220)
                     /locus_tag="WJJ54_000896"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8185..8187),aa:Gln,seq:ttg)
     gene            complement(8228..9073)
                     /gene="ispE"
                     /locus_tag="WJJ54_000897"
     CDS             complement(8228..9073)
                     /gene="ispE"
                     /locus_tag="WJJ54_000897"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEZ7341780.1"
                     /translation="MNIADGRQAFPAPAKLNLDLRITGKREDGYHNIESIFCLIDLQD
                     TVYLKLRDDGKIILHNPVDGMPQEADLSYRAASLLQKYARNPAGVEIWLDKKIPTGAG
                     LGGGSSDAATVLLVLNRWWQCGLTQRQLIDSGAALGADVPFFIFGKNAFARGIGDRLD
                     EMDIPKQWYVIVKPPVHVSTAKIFTHESLTRDSASSIMPTFQNLRPFRNDMQAVVFKE
                     YPEVWKAYSELSRYGFALMTGSGACVFTACQDRNSAYNIYRQVSGLYEAYLAEGLSKH
                     PLLSV"
     gene            complement(9083..9664)
                     /locus_tag="WJJ54_000898"
     CDS             complement(9083..9664)
                     /locus_tag="WJJ54_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein LolB"
                     /protein_id="HEZ7341781.1"
                     /translation="MKHTVSASVILLLTACAQLPQNNENLWQPSEHTRSFTAEGRLAV
                     KAEGKGSYANFDWTYQPPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAE
                     ELSRQLVGFKLPIQYLHIWADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTL
                     QLNNGNLNIRLVFTEIGMPSETETPERCAARTR"
     gene            complement(9804..11648)
                     /locus_tag="WJJ54_000899"
     CDS             complement(9804..11648)
                     /locus_tag="WJJ54_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341782.1"
                     /translation="MLPNRFKMLTVLTATLIAGQVSAAGGGAGDMKQPKEVVKVFRKQ
                     QRYSEEEIKNERARLAAVGERVNQIFTLLGGETALQKGQAGTALATYMLMLERTKSPE
                     VAERALEMAVSLNAFEQAEMIYQKWRQIEPIPGKAQKRAGWLRNVLRERGNQHLDGLE
                     EVLAQSDDVQKRRIFLLLAQAAVQQDGLAQKASKVVRRAALKYEHLPEAAVADVVFSV
                     QGREKEKAIGALQRLAKLDTEILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQ
                     EMEIMNLVSLHRLDDAYARLNVLLERNPNADLYIQAAILAANRKEGASVIDGYAEKAY
                     GRGTEEQRSRAAMTAAMIYADRRDYTKVRQWLKKVSAPEYLFDKGVLAAAAAVELDGG
                     RAALRQIGRVRKLPEQQGRYFTADNLSKIQMLALSKLPDKREALRGLDKIIEKPPAGS
                     NTELQAEALVQRSVVYDRLGKRKKMISDLERAFRLAPDNAQIMNNLGYSLLSDSKRLD
                     EGFALLQTAYQINPDDTAVNDSIGWAYYLKGDAESALPYLRYSFENDPEPEVAAHLGE
                     VLWALGERDQAVDVWTQAAHLTGDKKIWRETLKRHGIALPQPSRKPRK"
BASE COUNT         2790 a         3337 c         2843 g         2794 t
ORIGIN      
        1 aaaacatcgc gcccgcttga gaaactgcca accgctttat aacaaattcg tctttgcacc
       61 aaactttcca ttctttccgt ttttcggacg gcatcgttaa agtagtcctt ccttttcctt
      121 attttcagca ttgttttatg ttactgctca aaacgcccgg cgtactgccc ggcttcaaac
      181 tcagccttgg tctgaccgta ttgtgcctgt cgctgctggt ggttttgccg tttgcgatga
      241 tggcggcgaa ggcggctgaa atcggctggg gcggcttttg gaacacgatt gccgagccga
      301 acgtattggc ggccgtctgg ctgagtttgc ggatgtcgtt ttatgcgatg ctgaccaatg
      361 tcgtgttcgg cacgctggtg gcgtgggtat tggtgcgtta tgaattcccg ggcaagggtc
      421 tggcgaacgc gctggtcgat ttgccgtttg cgctgccgac ggcagttacg ggtatcgcgt
      481 tggcaaccct gtatgcgccc aacggttgga taggccgttt tttcgagcct ttgggcatca
      541 aaatcgcgtt tacgcccgtc ggcatttgga ttgcgctggt cgtcgtcagc ctgcccttta
      601 tcgtccgcgc cgtgcagccg gtgttggagg aattatcggg cgaatatgag gaagcggcgg
      661 cgactttggg cgcaaaccgc tttacgacgt tccgccgcgt gctgctgccg gaaatcacgc
      721 cggcactctt gaccggcgcg ggaatgatgt tcgcgcgggc aacgggggaa tacggctcgg
      781 tgatttttat cgcgggcaac attccgatgg tttctgaaat cctgccgctg attattacgg
      841 gcaagctgga acagttcgac gtgcagggcg cgtcggcggt ggcgttgttt atgctgctgg
      901 tttcgtttgt gattctgttt gcgctgaacg tgatgcagtg ggcgttgggc aggcgttcgg
      961 gcgcgaaggg ttgaggtcgt ctgaaatacc tgttaccgtc attcccgcgc aggcgggaat
     1021 ccattggtga atttcggctg ccttatttat tttctgtttt cctgttgccc tgcggtggat
     1081 tcccgcctgc gcgggaatga cggtagctag acgtttttat tcccttaatc aataaaaggt
     1141 tgtctgaaaa cgaatccgcc ccacaaaaaa cggtttttca gacggcatcc gaacacctta
     1201 aaacaaccaa ccggggaaca ccaccgccat gaaaccctat tccgccaatc ccaacctgac
     1261 cgaaccgcgc cggctgcgcg tgttgctgat tgccgccgcg ctgggctttc tgctgctgat
     1321 gctggtcgtg ccgctcgtcg ccgtgtttta cgaagcctta aaaggcggtt gggatttgta
     1381 cctgaaatcc ttaaacgatc ccgaagcgtg gtctgccatc aaattgacgc tgattaccgc
     1441 gctgattgtc gtccccgtca atgccgtctt gggcgtggcg atggcgtggc tgctgacccg
     1501 ttttgacttc cgaggcaagc agttgctgac taccctgctc gatttgccgt tttccgtatc
     1561 gcccgtggtg gccggtttaa tgttcgtctt attgttcggc gcgcacacgg cattgggtgg
     1621 ctggctcgaa gcgcaaggca tacagattat cttcgccatc cccggcatta ttctggcgac
     1681 gctgttcgtt accttcccct ttgtcgcgcg cgaaatcatc ccgctgatgc aggcgcaggg
     1741 cgacagcgaa gaacaggccg cgctgatact cggcgcaagc ggctggcaga tgttttggcg
     1801 cgttaccctg cccaacatca aatgggcgtt actctacggc atcatcctca ccaacgcccg
     1861 cgcgatgggc gaattcggcg cggtcagcgt ggtatcggga cacatacgcg gcgaaaccaa
     1921 caccgtcccg cttttggtcg aaatcttcta caacgaatac aactttaccg gcgcattcgc
     1981 cctctccggc gtattggcac ttttagcact ggcgacgctg gcggtgcaaa acatcattac
     2041 caaattacaa gacaaaaaac tcgccgccgc cgaaaggaac acagtatgag tatcaccatc
     2101 caaaacttaa acaaacactt cggcaatttt cacgcgctga aaaacatcaa cctcaacgtc
     2161 cccaccggca aactcgtttc cctactcggc ccgtccggct gcggcaaaac cacgctttta
     2221 cgcattatcg ccggactgga aaacgccgac ggcggccaaa tcctctttga cgggcaagac
     2281 gtaaccgcca aacacgtgcg cgagcgcaaa gtcggcttcg tgttccaaca ctacgccctc
     2341 ttccgccaca tgaacgtgtt tgacaacgtc gctttcggtt tgaccgtatt gcccaagtcc
     2401 gaacgcccgt ccaaaggaca aatccgcgcc aaagtcgaag aattactcaa gctcgtgcag
     2461 ctctctcatt tggcaaaatc ctatccgcac caactctccg gcgggcaacg ccagcgcatc
     2521 gccctcgccc gcgcgcttgc ggtcgaaccc aaactcttgc ttttggacga acccttcggc
     2581 gcgttggatg ccaaagtacg caaagaatta cgcacctggc tgcgcgacat ccatcacaac
     2641 ctgggtgtaa ccagcattct ggttacgcac gaccaagaag aagccctcga agtttccgac
     2701 gaaatcgtcg tgatgaacca cggcaaaatc gaacaaaccg gcagcgccga agctatttac
     2761 cgcaaacccg aaaatgcctt cgttaccgag ttcctcggcg aaaccgacgc ttttgaagga
     2821 cgcatcgaaa aaggcttctg gcattatagc ggcttcgcgt ggaaattgga cgcacaatac
     2881 aaatggcagg aacaaaccgc caccggctat atccgcccgc acgaatggca gatcgccgcc
     2941 gaacacgaaa caccgatgat ttgtgccgaa atcgaaaaag tccacgccgt cggggcattg
     3001 acgcatattt tggtgaaaca cggcaaacaa gacgtgcaca tcacgctggc tggcagcgat
     3061 gccgcgcgtt acccaatcgc cgaaggcaaa gcattgaagc tgattccgaa acaggtttat
     3121 gtcttctctc aaaacgaact gattgaatat tcgatttaac catgaaagcg caatgccgtc
     3181 tgaaaggctt tcagacggca ttgtgctttc aagcgtcagg caagaaacag cttgtacgcg
     3241 gcattttgcg tttcctcgtg atagctgtat cccagacttt ccaagaaacc gtcaaatgcg
     3301 gcggcatcgt gcggcggcac atcgataccg accagaatcc gcccgtaatc cgcaccgtgg
     3361 ttgcggtaat ggaagagcgt aatgttccaa ccgccctgca tatggttcaa aaaacgcgcc
     3421 aacgcccccg gacgctccgg aaactcaaaa ctgaccagac gctcgttttc tactttgtcc
     3481 gtccgccctc cgaccatata gcggatatgg attttggcaa tctcatcatc ggtcaggtcg
     3541 acattgggca atcccgcctc atccaaccgg ctaccgataa ccgccaaatc ctgcggacct
     3601 gccgcttgaa gtccgacaaa gatatgcgct ttttcatcgt ccccgtagcg gtagttgaac
     3661 tcggtaatat tcctatttcc caatatattg acaaacttaa ggaagctgcc gcgctcttcg
     3721 gggatggtaa cggcaaaaat accttcgttg ccctcgccca attcgctccg ttccgaaacg
     3781 tggcgcaaac ggtgaaaatt catattcgcg ccgctggtaa cggcaatcag ggtttggttt
     3841 tccgcgcctt ctcgggcgat ataggctttc agacctgcca atgccaatgc acccgccggc
     3901 tcggtaatgc tgcgcgtgtc atcgaaaata tccttgaccg cgccgcaaac cgcatcggta
     3961 tcgactgtaa tgatttcatc caaaagttct ttgcagaggc ggaaggtttc gtcgccgaca
     4021 actttgaccg cagtgccgtc tgaaaacagc ccgacatctt tcaaatggac gatttcgccc
     4081 gcttcaaccg attgcttcat acagcaggaa tcgttggtct gaacgccgat aactttgatt
     4141 tcggggcgga cctgcttgat aaatgccgcc acgcccgccg ccaaaccgcc accgcctatc
     4201 ggtacgaata cggcgcggat tggatcggga tgctggctga caatttccat ccccaccgtc
     4261 ccctgtcccg caatcacatc aggatcatca aacggcgcga tataggttaa cccttctttt
     4321 tccgccaact ccatcgcata atcgtaggca tcgttgtatg aaacgccccg caaaaccacc
     4381 tcgccgccat ggcttttaac cgcatccact ttgattttcg gcgtagtttc cggcataacg
     4441 ataacggcac ggcaacccaa acgctgtgcg gacaatgcca cgccttgtgc gtgattgccc
     4501 gcgcttgccg caatcacgcc gcaagcgagc gcatctttcg gcaacttgga cattttgttg
     4561 tacgcgccgc gtattttgaa cgaaaaaacc ggctgcaaat cttcgcgttt caaaaggatg
     4621 ttgtttttca aacgtacaga aaggctgcgt gccggttcca aaggcgtttc gaccgcgaca
     4681 tcatagacag atgccgtcag gatgcggatg aggtaatcgg aataaggaag gggcgtgttc
     4741 ataattcaat atgggataat cggtttatta aaatcgcaaa acccaaaacc atacgcccaa
     4801 gacggcgcga aagcaagaaa aatccgcccg atcagacacc ctaagcgtat aatcggcagg
     4861 ctgaaacacg cacacaatta gaatatttca tgacagcaca taaaatcctg cccgtcctac
     4921 tttccatcat cttaggcgtt tctcacgcaa cggccgcatc gcccgcgccc aacagaccga
     4981 cggtacacgc cgcccccacg ctccaaacac ccgaaaccct cacagcggca cacatcgtta
     5041 tcgaccttca aagcagacag actttatccg ccaaaaacat caatacccct gtcgaaccgg
     5101 cggcactaac ccaactgatg accgcatatt tagttttcaa aaacatgaaa tcgggaaata
     5161 tccgatctga agaaaactta aaaatacccg aatccgcatg ggcttcagaa ggaagcagaa
     5221 tgtttgtacg tcccggcgat acggtcggca ccgacaaact cttaaaaggc atgattgccc
     5281 tatccgcaaa cgatgccgcc ctaacccttg ccggccgact gggcaacggc tcgattgaaa
     5341 attttgtgca acaaatgaac aaagaagccc gacgcttggg catgaagaac actgtattca
     5401 aaaacccgac aggcttgagt agagaaggac aggtttccac cgccaaagac ctcgccctgc
     5461 tgtctgaagc attgatgcgc gactttccgg aatattaccc gctgttttcc atcaaatctt
     5521 tcaaattcaa aaatatagaa caaaacaacc gcaatatcct tttatatagg gacaacaatg
     5581 taaacggtct gaaagccgga cacacagaaa gcggcggcta caaccttgcc gtgtcataca
     5641 ccggaaacgg caggcatatc cttgtcatca cattgggttc ggaatcggcg gaaacacgcg
     5701 catcagacaa cagcaagctg ctgaactggg cattgcaggc cttcgatacg cccaaaatat
     5761 atccgaaagg caaaaccgtt gcccaaatcc aaatttccgg aggcagcaaa aaaaccgtcc
     5821 gcgcaggctt cctcaaagaa gcctacatca ctctgccaca taaggaagcg aaaacagccg
     5881 aacaaatttt ggaaaccata cagccgattc ccgccccggt aaaaaaaggg caaattttag
     5941 gaaaaatcaa aatcagacaa aacggataca ccattgccga aaaagaaatc gtcgcactgg
     6001 aaaatgtaaa aaaaagaagc cggtggcaaa ggctttggat gcgtctgacg ggacagtaat
     6061 ctgccgtttc aaatatcccg tttttccaac aaataaagaa atgccgtctg aaacacggtt
     6121 cagacggcat aaaacaacag ggcggtacgt attgcatacg caccgccctg ctgctgaaat
     6181 caattagcgt tttttaccgg taacggtggc aacagccaga ttttcgttac gtttcaagga
     6241 aacgctttct acaccttcag gcagtttgat gtcggacaaa tgcaaaatgt cgccggcaac
     6301 cacttcggca caatccaaat ccaagaaagc agggatattg gcaggcaacg caagcacttc
     6361 aaccgtcgtg ttcaacagag atacacggcc gccttgcagt ttgaccgctt gggaattttc
     6421 agcgttaacg atgtgcaggg gaacacggat acgtacaagt tgatcagctt tcacagcttg
     6481 gaagtcgata tgttgaactt cgcggcggaa cgggtgcatt tggaaatcgc ggacgataac
     6541 gtctttagtt tcaccgttca gagacaactt aatcaacgca gtatggaaag attctttttc
     6601 caatgcgtag aatacggttt tgtgatccac agcgattgca acaggctctt gaccttcacc
     6661 gtacagaatg ccggggattt ggccttcgcg acgcaggcgg cggctcgcac cagtgccttg
     6721 tgcttcacga acagaggctt gaatttcata agtcatgtta aatactccaa gttaggtaaa
     6781 atcgccgtca tcggccgcga ccagcttaag acggcttcgg gcttatggca gcaacatact
     6841 gcctgtcatc acttcttcat taaagagata tgaaacggat tcttcattgc tgatgcggcg
     6901 gacggtttcg gccaacagac cggcaatcgt tacctgacgg atacggtcgc agtttttagc
     6961 cgcttcagac aaaggaatgg tatcggttac gaccacctgg tcgatttcgg atgaggcgat
     7021 acggctgacc gcctctccgg agaatacggc gtggctggca tatgccaaga cacgttccgc
     7081 cccccgctct ttcagagcga cggcggcttt gcacagcgta tttgcagtgt caatcatatc
     7141 gtccacaatc agacaggttc tgccttgaat atcgccgatg atgttcatga cttctgccac
     7201 attggctttc gggcggcgtt tatcgatgat tgccaagtcg gcattcaagg attttgccac
     7261 ggcgcgggcg cggacgacac cgccgatgtc cgggctgacg acggtcagat tttcaatccg
     7321 ctgttgtttg atgtcgttca acagaatcgg ggtggcataa atattgtcca ccggaatatc
     7381 gaagaaacct tgaatctggt cggcatgcaa atcgacagtc aaaacacggt cgatccctgc
     7441 cgaatacagc atatttgcca ccagtttggc agaaatcgga acgcggacgg aacgcggacg
     7501 gcggtcttgg cgcgcatagc cgaaatacgg aatggctgtg gtaatacgac ctgccgaagc
     7561 acgcttcagt gcatccgcca tcgtcaggat ttccatcagg ttgtcattgg tcggcgcaca
     7621 ggtcggctga aggatgaaaa catcgcgccc gcgtacgttt tccaacagtt cgacggcaac
     7681 ttcgccgtct gaaaacttgg atacggaagc attgcccaaa gaaatgtcca aatgcctgac
     7741 aacacgttgt gccaattcgg gattggcatt gcctgtaaat accatcaaac tgtcgtacgc
     7801 agccatattc tcacctgatt ttatgtttaa cttccgctca gaaaacacaa tgcttccctc
     7861 tgcttgtacc aagcccgaca ttatacctgc aacatccgac acaaacaaag gcatttcaat
     7921 atttttattt ctatgaaata aaagcgtgta agcaggctta cacgctttta tctggctggg
     7981 gaggaaggat tcgaaccttc gcatgctgga atcaaaatcc agtgtcttaa ccgcttgacg
     8041 actccccaaa aagggctggc tggggaggaa ggattcgaac cttcgcatgc tggaatcaaa
     8101 atccagtgtc ttaaccgctt gacgactccc caactcgttt gacttggctg gggaggaagg
     8161 attcgaacct tcgcatgctg gaatcaaaat ccagtgtctt aaccgcttga ctactcccca
     8221 acaatgttta tacggacaac aaaggatgct ttgaaagacc ctctgccaaa tatgcctcgt
     8281 acaaacctga aacttgtcgg tatatattgt atgcgctatt cctatcttga cacgccgtga
     8341 atacacatgc cccggaacct gtcattaagg caaatccata tcgggacaac tcggaatagg
     8401 ctttccaaac ttcagggtat tctttaaata caactgcctg catatcattt ctaaacggtc
     8461 gcagattttg gaaagtcggc attatgcttg aggcagaatc ccgtgtcaag ctttcgtgtg
     8521 tgaaaatttt tgcagtggaa acgtggacgg gcggtttgac gatgacatac cactgtttcg
     8581 gaatatccat ttcgtccagc ctgtcgccta taccccgcgc aaacgcattt tttccgaaaa
     8641 taaaaaacgg tacgtccgcc cccagagccg cgcccgaatc aatgagctgc cgctgcgtca
     8701 gaccgcactg ccaccaacgg ttcaacacca gcaaaacggt tgccgcatcc gagcttccgc
     8761 cgcccaaacc cgcccctgtc gggatttttt tgtccagcca tatttccacg ccggcggggt
     8821 tgcgcgcata tttttgcagc aacgatgcgg cacggtagct caaatcggct tcctgcggca
     8881 tgccatcaac cggattgtgc aggatgattt tgccgtcgtc ccttagtttc aaatatacgg
     8941 tatcctgcaa atctatcagg cagaatatgc tttcgatatt gtgataaccg tcttcccgct
     9001 ttccagtaat cctcaaatcg agattcagtt ttgcaggtgc gggaaacgcc tgccgtccgt
     9061 ccgcaatatt catctgtccg ccttatctcg tgcgcgccgc acagcgttcc ggggtttcag
     9121 tttcagacgg cataccgatt tcggtgaaaa ccagcctgat gttcaaattt ccgttattca
     9181 gttgcaacgt tcggacttgc cccccactgt cggcggttct gccgacagtc caaccgtatt
     9241 gttccaatat gccgtccggc aggatgcggt aaggcgcgcc cgccacacgc ctgccatctg
     9301 cccagatatg cagatattgg attggcagtt tgaaaccgac cagctgcctg ctcaattctt
     9361 ccgcactttc cgcctgatag acatttcctt tgccgtccac tgccaatgcg ccgtccctgt
     9421 cttgacacaa ctgcccgagc gtactgccca aaggggtatt gatattgatg gtttccacgg
     9481 gcggttggta tgtccaatcg aaatttgcat acgaaccttt cccttccgct ttcactgcca
     9541 accgcccttc cgccgtgaaa ctgcgggtgt gttcggacgg ctgccacagg ttttcgttat
     9601 tttgaggcaa ttgcgcgcaa gcggtcaaaa gcaggatgac cgatgcggat acggtgtgtt
     9661 tcatcagaat ttccttaacg ggtgccatcc tgccggccgg cgggttcggc gtgccgtgca
     9721 aaacgcgtgc gaactgcgtg ccgtttgccc gaatgccccg gcttcccggc aaaccttatg
     9781 ccgtctgaaa ggatggacct gcattatttc cgaggttttc gggaaggttg gggcaatgcg
     9841 atgccgtgac gtttgagcgt ttcccgccat attttcttgt ctcccgtaag gtgtgccgcc
     9901 tgcgtccata cgtcaaccgc ctgatcgcgt tcgcccaatg cccacaacac ttcgcccaaa
     9961 tgggcggcaa cttcgggctc ggggtcgttt tcaaacgaat accgcagata cggcagcgcg
    10021 ctttccgcgt cgcctttcag gtaatacgcc cagcctatgc tgtcgttgac agcggtatcg
    10081 tccgggttga tttggtatgc cgtctgaagc agggcgaagc cttcgtccaa acgtttggaa
    10141 tcggaaagca ggctgtagcc cagattattc ataatctgag cgttatcggg tgcaagcctg
    10201 aacgcccttt caagatctga aatcattttt ttccgcttgc caagccgatc gtaaacaact
    10261 gaccgctgta ccaatgcctc tgcctgtaac tctgtattac tgccggcagg cggtttttcg
    10321 ataatcttgt ccaaccccct caaagcctcc cgtttatcgg gcagcttcga cagggcgagc
    10381 atctgtattt tggacaaatt gtctgccgta aaataccgcc cctgctgttc gggaagtttc
    10441 cgcaccctgc cgatctgccg caaagccgcc ctgccgccgt ccaactcgac agccgccgca
    10501 gccgccagca cacctttgtc gaacaggtat tccggcgcgg acactttttt caaccactgc
    10561 ctgactttgg tgtaatccct tcggtcggca tatatcatcg ccgccgtcat tgccgccctg
    10621 ctccgctgtt cctccgtccc cctgccgtat gccttttcgg cgtagccgtc gataacggaa
    10681 gcaccttctt ttcggtttgc cgccaatatc gctgcctgaa tatacaggtc tgcattcgga
    10741 ttgcgttcca acagcacgtt caaacgcgca taggcatcat ccagcctgtg cagggaaacc
    10801 agattcataa tttccatttc ctgccagacg gccgaaaggt tttgggtgtc tgtctgctcg
    10861 aaaaagccgt cgagtatttc gggatatttg cgtgcagtca gacgcaacgt cattaaagtg
    10921 gggggcaata tttccgtatc gagcttcgcc aaacgctgca aagctccgat tgccttttcc
    10981 ttttcgcgtc cctgtacgct gaacaccaca tcggcaaccg ccgcttcggg cagatgttca
    11041 tatttcaacg ccgcgcggcg aaccactttc gatgcttttt gcgccaatcc gtcctgctgc
    11101 acggcggctt gtgccagcag caaaaatatc ctgcgttttt gcacatcgtc cgattgtgcc
    11161 agcacctctt ccagtccgtc cagatgctga tttccccttt ccctcagcac gttccgcagc
    11221 caccccgccc gtttttgcgc cttacccggt ataggctcaa tctgccgcca tttctgataa
    11281 atcatttccg cctgttcaaa cgcgttcagc gacacggcca tttccaaggc gcgttcggcg
    11341 acttcggggg attttgtacg ctccaacatc agcatatagg ttgccagagc cgttcccgcc
    11401 tgcccctttt gcaaggcggt ttcccctccc agtaacgtaa atatctgatt aacccgctcg
    11461 cccactgccg caagccgtgc gcgttcgttt ttgatttctt cctcactgta acgctgctgc
    11521 tttctgaaaa cctttacgac ttccttcggc tgtttcatat cccccgcacc gcctccggcg
    11581 gcagatacct gtccggcaat caaggttgcc gtcaacacag ttaacatttt gaaacggtta
    11641 ggtaacataa tcatccttta tccgacagcc gtccgaacct tcagacggca tataatcagg
    11701 cgtaacttta tcacaagcag aatcgtttgt agatttgcga aaccccgttc aaaaaaataa
    11761 atgc
//
LOCUS       DAWKJW010000045        11738 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.045, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000045 DAWKJW010000000
VERSION     DAWKJW010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11738)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11738)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11738
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.045"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(338..760)
                     /locus_tag="WJJ54_000900"
     CDS             complement(338..760)
                     /locus_tag="WJJ54_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEZ7341783.1"
                     /translation="MQVTSKWIDGMCFVGTTEGGHSVVMEGSAAEGAAKRGPSPLEML
                     LLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVFGHDLKE
                     SAIERAVQMSAEKYCSASIMLGKAAKITHSFEIAGADK"
     gene            complement(878..1549)
                     /locus_tag="WJJ54_000901"
     CDS             complement(878..1549)
                     /locus_tag="WJJ54_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEZ7341784.1"
                     /translation="MMKTFKNIFSAAILSAALPCAYAAGLPQSAVLHYSGSYGIPATM
                     TFERSGNAYKIVSTIKVPLYNIRFESGGTVVGNTLHPTYYRDIRRGKLYAEAKFADGS
                     VTYGKAGESKTEQSPKAMDLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTG
                     KYSIGGVETEVVKYRVWRGDDTVMYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQING
                     QAAKP"
     gene            complement(1565..2191)
                     /locus_tag="WJJ54_000902"
     CDS             complement(1565..2191)
                     /locus_tag="WJJ54_000902"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEZ7341785.1"
                     /translation="MKNIVILISGRGSNMQAIVNAAIPNVRIAAVLSNSETAAGLQWA
                     AERGIPTDSLNHKNFESRLAFDTAMMEKIDAYQPDLVVLAGFMRILTPEFCARYEGRL
                     MNIHPSILPSFTGLHTHERALEAGCRVAGCTIHFVTAELDCGPIVSQGIVPILDGDTA
                     DDIAARVLAVEHKLYPKAVADFAAGRLIIEGNRVRNSENADAARFLTA"
     gene            complement(2298..3116)
                     /locus_tag="WJJ54_000903"
     CDS             complement(2298..3116)
                     /locus_tag="WJJ54_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ7341786.1"
                     /translation="MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASSAQGDT
                     SSIGSTMQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQ
                     EVMMKFLQEQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGE
                     GKQPTKDDIVTVEYEGRLIDGTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEA
                     TFYIPSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPAKQPAQVDIKKVN"
     gene            complement(3375..3815)
                     /locus_tag="WJJ54_000904"
     CDS             complement(3375..3815)
                     /locus_tag="WJJ54_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEZ7341787.1"
                     /translation="MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGQLQEL
                     DKMLWQYEAESFIPHEIWETEEAMPSEPSVLLACGGNLPRIPEGMTVLNLSDGFWNTA
                     PVLPARVLEIVGNSLEDLADARERFTAYRRSGFAIEHHGMEGKA"
     gene            complement(3878..5284)
                     /locus_tag="WJJ54_000905"
     CDS             complement(3878..5284)
                     /locus_tag="WJJ54_000905"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEZ7341788.1"
                     /translation="MEFSTKTEILQEQQAGAQLFVCTEEAQLNHPTALALLSSLEEGQ
                     TFADTKIPTGNGLQAVAVVRLEKTDRAALNKAAAEAAKWAQNQETVNVDVHAFEEAQA
                     AAVAEAFAIAFGNAAYRFDRYKKEAKPAKFAEAVFHSAHEAAVKEALRVAEAQVYGQS
                     LCRDLGNAAPNECTPEFLARTAKAEAEKLGAHVKIIEKDYIKENMGSFWSVAKGSVED
                     PYLVELSYFGAADKEAAPVVLVGKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTF
                     CAAVKLQLPINLIAIVATCENMPSGAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDA
                     LTYAEQFKPKAVIDVATLTGACIVALGHDVSGVMGNNQDLVDSLLAASYNVDDKAWQL
                     PLFETYKDQLKSNFADIPNIGTPGAGTITAATFLSYFTEDYPWAHLDIAGTAWKSGAE
                     KGATGRPVPLLLNYLRNL"
     gene            5454..6569
                     /gene="lptF"
                     /locus_tag="WJJ54_000906"
     CDS             5454..6569
                     /gene="lptF"
                     /locus_tag="WJJ54_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HEZ7341789.1"
                     /translation="MIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVA
                     IDAVLALVGFWVIGMTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPV
                     MQFAVPFAVLVAVMQLWVIPWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVY
                     FVETFDTESGIMKNLFLREQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPG
                     RADYNQVSFQKLNLIISTTPKLIDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVS
                     VLLLCLLAVPLSYFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLP
                     MHIIMFVIAIVLLRVRSMPSQPFWQAVGKSLTLKGGK"
     gene            6566..7636
                     /gene="lptG"
                     /locus_tag="WJJ54_000907"
     CDS             6566..7636
                     /gene="lptG"
                     /locus_tag="WJJ54_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HEZ7341790.1"
                     /translation="MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSY
                     GIWEMLGYTALKMPARAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLI
                     LSQFGFIFAIATVALGEWVAPTLSQKAENIKAAAINGKISTGNTGLWLKEKNSIINVR
                     EMLPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSI
                     AAEENWPISVKRNLMDVLLVKPDQMSVGELTTYIRHLQNNSQNTRIYAIAWWRKLVYP
                     AAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRFFGFTSQLYGIPPFLA
                     GALPTIAFALLAVWLIRKQEKR"
     gene            7946..10531
                     /gene="acnB"
                     /locus_tag="WJJ54_000908"
     CDS             7946..10531
                     /gene="acnB"
                     /locus_tag="WJJ54_000908"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HEZ7341791.1"
                     /translation="MLEAYRKAAAERAALGIPALPLNAQQTADLVELLKSPPAGEGEF
                     LVELLAHRVPPGVDDAAKVKASFLAAVAEGSASSPLISPEYATELLGTMLGGYNIHAL
                     IELLDDDKLAPIAAKGLKHTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFASRA
                     KVPEKITVTVFKVDGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVG
                     PIKLLEELKAKGHPVAYVGDVVGTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGG
                     KIAPIFFNTQEDSGALPIEVDVSALKMGDVVDILPYEGKIVKNGETVAEFELKSQVLL
                     DEVQAGGRINLIIGRGLTAKAREALKLPASTAFRLPQAPAESKAGFTLAQKMVGRACG
                     LPEGQGVRPGTYCEPRMTTVGSQDTTGPMTRDELKDLACLGFSADMVMQSFCHTAAYP
                     KPVDVKTHKELPAFISTRGGVSLRPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGIS
                     FPAGSGLVAFAAATGVMPLDMPESVLVRFSGKLQPGVTLRDLVNAIPLYAIKQGLLTV
                     AKAGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTVKLNKEPIIEYMKSN
                     VVLMKNMIANGYQDPRTLERRIKAMEKWLANPELLEADKDAEYAAVIEINMDDIKEPI
                     IACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRAASKLLEGKADTPVRLWIAPP
                     TKMDAKQLSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
                     KNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDKIYRYMNFNEIDSYNEVA
                     ETVNV"
     gene            10673..11668
                     /locus_tag="WJJ54_000909"
     CDS             10673..11668
                     /locus_tag="WJJ54_000909"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEZ7341792.1"
                     /translation="MNLKNRHFLKLLDFTPEEITAYLDLAAELKAAKKAGREIQRMKG
                     KNIALIFEKTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDA
                     IEYRGFGQEVVEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYV
                     GDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAH
                     EAVKNVDFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAF
                     HNRETKVGEWIYETFGLNGVEVTEEIFESPASIVFDQAENRMHTIKAVMVAALGD"
BASE COUNT         2693 a         3256 c         3054 g         2735 t
ORIGIN      
        1 gtactggttt ttgttaatcc actataattc aataaattaa tatatggctt aaaataacgg
       61 gattctcgcc tcccgcccgc ccgcagaagc aggcgggtat cattttaaaa cgcggcattt
      121 aaaatttgac cgaaaattgt tgacaatccg gaatcaagtc tgcacaatac cccgacaagt
      181 ccaagtatta taaaggctga ataaagagga aacagcaggc agatatattc gggaggtgca
      241 gtccgaatat atctgctttt ttatgcgcct ccggattgcc tgccgcacct ttcccttcag
      301 acggtatcag ccgtttcccc ataatgccgc ccgatgccta tttatctgcc ccggcaattt
      361 caaaactgtg ggtaatcttt gccgctttgc ccaacataat cgaagccgaa cagtattttt
      421 cggcagacat ctgaacggcg cgctcaatgg ccgattcttt caaatcatgc ccgaatactt
      481 tgaaatggat gtggatttcg gtaaacacgc gcggcgcatc gtccgcccgt ttcgccgtaa
      541 ccgtcgcacg gcagtcagtc actttctgac gctgtttttc ggcaatcatc accacatcga
      601 tgctcgaaca gcccgccacg cccaacagca gcatttccaa agggctgggc ccgcgcttgg
      661 ccgcaccttc tgccgccgaa ccctccataa cgacgctgtg cccgccttcc gtcgtgccga
      721 caaagcacat tccgtctatc cattttgatg taacctgcat ggtgtcattc ctgaaaatag
      781 cgttaaaacc gctttgcata tggcgttatt gtaaacaatt tcaagcggct tatgcagaaa
      841 tatggacaaa acggcaaaaa aacacttgaa aaccgattta cggtttggct gcctggccgt
      901 tgatctgcac cgatttgagt ttcagcgtat aggttttgcc gtcgtcggta tagccgattt
      961 gtgctggaat attgttcagg gacggtgcga agaaatacat taccgtatcg tcgccgcgcc
     1021 acacccgata tttgacgact tcggtttcca cgccgcctat gctgtatttt cctgtacccg
     1081 ccttattcaa accgccgacg gaataaagtt ttttgccgtt ggtgattttc agccccgggg
     1141 ggagtttcgc gtcatttgcc gccaactgcc aggcaagcgt gaacaaatcc atagccttgg
     1201 ggctttgctc ggttttgctc tcgcccgctt tgccgtaggt tacgctgccg tcggcgaatt
     1261 tggcttccgc atacagtttg cccctgcgta tgtctctata gtaggtaggg tgcagggtat
     1321 tgccgacaac cgtaccgccg gactcgaaac ggatattgta tagcggcact ttaatcgtcg
     1381 aaacgatttt gtaagcattg ccgctgcgtt caaatgtcat cgtggcggga atgccgtagc
     1441 tgccggaata gtgcagcacg gcggattggg gcagccctgc cgcatacgcg cacggcaggg
     1501 cggcggacaa aatggcggcg gaaaatatat ttttaaaagt cttcatcatt tgctcccgcc
     1561 cggtttacgc cgtcaggaaa cgggcggcat cggcgttttc cgaatttctg acgcggtttc
     1621 cctcgataat caggcggccg gcggcaaaat cggcaacggc tttcggataa agtttatgct
     1681 cgacagccaa aacccgtgcg gcaatatcgt ctgccgtatc gccgtcaagt atcggcacaa
     1741 tcccttgcga tacaatcggg ccgcaatcca gttcggcagt aacgaaatgg atggtgcagc
     1801 cggcaacgcg gcagcccgcc tccaaagcgc gttcgtgcgt atgaagtccg gtaaacgagg
     1861 gcaggatgga cgggtgaatg ttcatcagcc tgccttcgta acgggcgcaa aactcggggg
     1921 tcagaatccg cataaaacct gccaaaacca ccaagtcggg ttgatatgcg tcgatttttt
     1981 ccatcatggc cgtatcgaag gcaagtcgtg attcaaagtt tttatgattc aggctatcgg
     2041 tcgggatgcc gcgttcggcc gcccattgca aaccggcagc cgtttcgctg ttgctcaaca
     2101 cggcggcaat gcggacgttg ggaatggcgg cattgacgat tgcctgcata ttgctgccgc
     2161 gtccggaaat caggatgacg atgtttttca taatggtacg cttttgaaag ggatgccgtc
     2221 tgaaccgctg tttggtggtt tcagacggca tttgccgtaa aaatgcccga aaacctgttt
     2281 cgggcatgga ttcggactta atttactttt ttgatgtcga cttgagccgg ctgcttggcg
     2341 ggcgcgtttt cgggtgcgcc gattttgacc agtttcacat caaataccaa agtggcgttc
     2401 gggccgattt tgtcgcccgc accctgttcg cggtaggcaa ggttggacgg gatgtagaac
     2461 gtggcttcgc cgccttcttt cagaagctgt acgccttcgg tccaacccgg aatcacttgg
     2521 ctcaaaggga aggtgaccgg gccgccgttg gctttgctgc tgtcgaatac cgtaccgtca
     2581 atcaggcggc cttcgtattc cacggtaacg atgtcgtctt tggtcggctg tttgccttcg
     2641 ccctgtttgg tgattttgta ttgcaggccg gaagcagtgg tcttcacgcc gtctttggcg
     2701 gcattttctt tcagaaaggc ttcgcctttt tctttattgg ccttcgcgtc cgccttgtgt
     2761 ttttctacgg ctttagcctg ttgttcctga aggaatttca tcatgacttc ctgagcctgc
     2821 tcttcggtca ttttgatttc tttgccgtca tacactgcct gcatggcttc ggtaaagact
     2881 ttcaaatcga tttccgcgcc ctgttccttc atttgcttca gggagcgtcc gatgtccacg
     2941 cccatcgcat agcttgcctg ctgcatcgtg ctgccgatcg aagaggtgtc gccctgcgcg
     3001 gaagaagcgg cggcaggttc ggatgcagat gcgggggcgg cttctttttt gccgcaggcg
     3061 gaaagtgcca aagcggcgga aagggtcagt gcgctgattt tgaaaatggt gttcatgatg
     3121 gatcttcgct gtcgataagg tcggaaaaac gggattatag ccgagtttga atgtttcaac
     3181 acacaggatg acacataaag cgtcaatcgt gtgttgccct gttttggaaa ggattgaacc
     3241 ttccaaaata agttttgatt ctaccgcccc gagggacaga tgtccaagtg gcggggttca
     3301 accgataagg aaattttaat caaatagaat caagcctgtt taaattttgt aaatgcggca
     3361 tttcagacgg cattttatgc cttgccctcc atgccgtgat gttcgatggc aaaaccgctt
     3421 cggcggtagg cggtaaagcg ttcgcgcgcg tcggcgagat cttccaagct gttgccgacg
     3481 atttccaaaa cgcgcgcggg caagaccgga gcggtgttcc aaaaaccgtc ggacaggttc
     3541 aaaacggtca tgccttcggg aattcggggc agattgccgc cgcaggcaag caggacggat
     3601 ggttcagacg gcatggcttc ttccgtttcc caaatttcgt gcggaatgaa actctcggcc
     3661 tcgtattgcc aaagcatttt gtccaattcc tgaagctgcc cgaacgaatc ggaccacacc
     3721 agtatcctgc cgccgtcccg aatcgcacgg gcaatcaggc ggcaggtgaa aatcggaact
     3781 tgggcaacgt gcgtgtaaaa ggtggctttc ggcatattgt ttgagcattt ggcaggacga
     3841 tgccgtctga aaggcttcag acggcattgt ggcaaaatta aagattccgc agatagttca
     3901 gcagcaaggg aacgggacgg ccggtcgcac ctttttccgc accggatttc cacgccgtac
     3961 ccgcgatgtc aaggtgtgcc catggatagt cttcggtaaa gtaggatagg aatgttgcgg
     4021 cggtaatcgt gcccgcgccg ggcgtgccga tgtttggaat gtcggcaaag ttggatttga
     4081 gttggtcttt gtaggtctca aagagcggca gttgccacgc tttgtcgtcc acgttgtagg
     4141 aagcggcaag caggctgtcg accaaatctt gattgttgcc catcacgccg ctgacatcgt
     4201 gccccaaggc aacaatacac gcaccggtca gggtggcgac gtcgatgacg gctttgggtt
     4261 tgaactgttc ggcgtaagtg agcgcgtcgc acaaaatcag acggccttca gcatcggtgt
     4321 tcaacacttc gatggtcagg cctttcatgc tttttacgac gtcgcccggt ttgttggccg
     4381 cgccggaagg catattttca caagtggcga cgatggcaat caggttgatc ggcagttgca
     4441 gtttgacggc ggcgcagaag gtgctgatga cggttgccgc gccgcacata tcaaacttca
     4501 tttcgtccat gttcagaccg ggtttgaggg aaatgccgcc ggtgtcgaag gtaatgcctt
     4561 tgccgaccaa gacgacgggg gcggcttctt tgtcggctgc accgaaatag ctcagttcga
     4621 ccaaataggg atcttcgaca ctgcctttgg cgaccgacca aaacgaaccc atgttttctt
     4681 tgatgtagtc tttttcgatg attttgacgt gcgcgcccag tttttcggct tcggctttgg
     4741 cggtgcgcgc taaaaattcg ggcgtgcatt cgttcggcgc ggcattgccc aagtcgcggc
     4801 agaggctttg tccgtaaacc tgtgcttcgg caacgcgcag ggcttctttg acggcggctt
     4861 cgtgtgcgct gtggaacacg gcttctgcaa atttggcggg cttggcttct tttttatagc
     4921 ggtcgaaacg gtaggcggca ttgccgaaag caatcgcaaa cgcttcggca acggctgcgg
     4981 cttgcgcttc ttcaaaggca tgaacgtcca cattgaccgt ttcctgattt tgcgcccatt
     5041 tggcggcttc ggcagcggct ttgttcagcg cggcacggtc ggttttttca aggcggacga
     5101 cggcgactgc ctgcaaaccg ttgcctgtcg ggattttggt gtcggcaaaa gtttgacctt
     5161 cttcaagcga agacaaaagg gcaagggcgg tcggatggtt taattgcgcc tcttcggtgc
     5221 agacaaataa ctgtgcgcct gcctgctgtt cctgcaagat ttcggttttt gtgctaaatt
     5281 ccacgtttat tctcctgatt gagacggttg tcggtagttt tcggacggcc tttcgctcaa
     5341 aagaccgtct gaagacggct ggcacgattg taccccattt gaagcaccgt ctgaaacctt
     5401 gcgcggacaa tccgcctgcg ccgaaccgct taccgccccc tgaccgcgat tctatgattt
     5461 atcaaagaaa cctcatcaaa gaactctctt ttaccgccgt cggcattttc gtcgtcctct
     5521 tggcggtatt ggtctccacg caggcaatca acctgctcgg ccgtgccgcc gacgggcgtg
     5581 tcgccatcga tgccgtgttg gcattggtcg gcttctgggt catcggtatg acgccgcttt
     5641 tgctggtgtt gaccgcattt atcagtacgt tgaccgtgtt gacccgctac tggcgcgaca
     5701 gcgaaatgtc ggtctggcta tcctgcggat tggcattgaa acaatggata cgcccagtga
     5761 tgcagtttgc cgtgccgttt gccgttttgg ttgccgtcat gcagctttgg gtgataccgt
     5821 gggcagagct acgcagccgc gaatacgctg aaatcctgaa gcagaagcag gaattgtctt
     5881 tggtggaggc aggcgggttc aacagtttgg gcaagcgcaa cggcagggtt tattttgtcg
     5941 aaaccttcga taccgaatcc ggcatcatga aaaacctgtt cctgcgcgaa caggacaaaa
     6001 acggcggcga caacatcatc ttcgccaaag aaggtaactt ctcgctgaac gacaacaaac
     6061 gcacgctcga attgcgccac ggctaccgtt acagcggcac gcccggacgc gccgactaca
     6121 atcaggtttc cttccaaaaa ctcaacctga ttatcagcac cacgccaaaa ctcatcgacc
     6181 ccgtttccca ccgccgtacc attccgaccg cccaactgat tggcagcagc aacccgcaac
     6241 atcaggcgga attgatgtgg cgcatctcgc tgaccgtcag cgtcctccta ctctgcctgc
     6301 ttgccgtgcc gctttcctat ttcaacccgc gcagcggaca tacctacaat atcttgattg
     6361 ccatcggttt gtttttaatt taccaaaacg ggctgaccct gctttttgaa gccgtggaag
     6421 acggcaaaat ccatttttgg ctcggactgc tgcctatgca catcatcatg ttcgtcatcg
     6481 caatcgtact tctgcgcgtc cgcagcatgc ccagccagcc cttctggcag gcggttggca
     6541 aaagtctgac attgaaaggc ggaaaatgaa cctgatttca cgttacatca tccgtcaaat
     6601 ggcggttatg gcggtttacg cgctccttgc cttcctcgct ttgtacagct tttttgaaat
     6661 cctgtacgaa accggcaacc tcggcaaagg cagttacggc atatgggaaa tgctgggcta
     6721 caccgccctc aaaatgcccg cccgcgccta cgaactgatg cccctcgccg tccttatcgg
     6781 cggactggtc tctctcagcc agcttgccgc cggcagcgaa ctgaccgtca tcaaagccag
     6841 cggcatgagc accaaaaagc tgctgttgat tctgtcgcag ttcggtttta tttttgctat
     6901 tgccaccgtc gcgctcggcg aatgggttgc gcccacactg agccaaaaag ccgaaaacat
     6961 caaagccgcg gccatcaacg gcaaaatcag caccggcaat accggccttt ggctgaaaga
     7021 aaaaaacagc attatcaatg tgcgcgaaat gttgcccgac cataccctgc tgggcattaa
     7081 aatctgggcc cgcaacgata aaaacgaact ggcagaggca gtggaagccg attccgccgt
     7141 tttgaacagc gacggcagtt ggcagttgaa aaacatccgc cgcagcacgc ttggcgaaga
     7201 caaagtcgag gtctctattg cggctgaaga aaactggccg atttccgtca aacgcaacct
     7261 gatggacgta ttgctcgtca aacccgacca aatgtccgtc ggcgaactga ccacctacat
     7321 ccgccacctc caaaacaaca gccaaaacac ccgaatctac gccatcgcat ggtggcgcaa
     7381 attggtttac cccgccgcag cctgggtgat ggcgctcgtc gcctttgcct ttaccccgca
     7441 aaccacccgc cacggcaata tgggcttaaa actcttcggc ggcatctgtc tcggattgct
     7501 gttccacctt gccggacggt tcttcgggtt taccagccaa ctctacggca tcccgccctt
     7561 cctcgccggc gcactgccta ccatagcctt cgccttgctc gccgtttggc tgatacgcaa
     7621 acaggaaaaa cgctaaacca atgccgtctg acccccttcg gacggcattg gtttttatta
     7681 tcatattcct gtagacagat agccgttccc tattatagtg gattaacaaa aaccagtacg
     7741 gcgttgcctc gccttgccgt actattgtac tgtctgcggc ttcgtcgcct tgtcctgatt
     7801 tttgttaatc cactatacat tacctgtcat aacagttcca tttttgttaa aactagtcta
     7861 tgatagcggt acaaatattg tttacaatat ttaacgcaaa tcatttgcaa cccgacaaaa
     7921 gaaaaacaga aaaaggaaca aagagatgtt agaagcctat cgtaaagccg ccgccgagcg
     7981 cgccgccctc ggcattcccg ccctcccttt gaacgcgcag caaaccgccg atttggttga
     8041 gctgctgaaa agcccgcccg caggcgaagg cgagttcttg gtcgaactgc ttgcccaccg
     8101 tgttccgccc ggtgtggacg atgccgccaa agtcaaagcc tcattcctgg ctgccgttgc
     8161 cgaaggcagc gcgtccagcc cgctgatctc ccccgaatat gcgaccgaac tcttaggtac
     8221 gatgctcggc ggttacaata tccacgcctt aatcgaactc ttggacgacg acaaactcgc
     8281 gcccattgcc gccaaaggct tgaaacatac gcttctgatg ttcgattcct tccacgacgt
     8341 tcaggaaaaa gccgaaaaag gcaacaaata cgcgcaagaa gttttgcaat cttgggcaga
     8401 tgccgaatgg ttcgcctcac gcgccaaagt tcccgaaaaa atcaccgtta ccgttttcaa
     8461 agttgacggc gaaaccaata cagacgacct ctcccccgcg cccgacgcgt ggagtcgtcc
     8521 cgatattccg ctgcacgcgc tggcaatgct gaaaaacccg cgcgacggca tcacgcccga
     8581 caaaccgggc gaagtcggtc cgattaaatt gttggaagaa ctcaaagcca aaggccatcc
     8641 ggttgcttac gtcggcgacg tggtcggtac tggttcttca cgcaaatccg cgaccaactc
     8701 cgtcatttgg cataccggcg aagacattcc gttcgtgccg aacaaacgct tcggcggcgt
     8761 atgtttgggc ggcaaaatcg cgccgatttt cttcaatacc caagaagatt ccggcgcgct
     8821 gccgattgaa gtcgatgtat ctgctctaaa aatgggcgat gtcgtcgata tcctgcctta
     8881 tgaaggcaaa atcgtgaaaa acggcgagac tgttgccgag tttgaattga aatcacaagt
     8941 attgctggac gaagtgcaag ccggcggccg tatcaacctg attatcggcc gaggtctgac
     9001 cgccaaagcg cgcgaagccc tgaaactgcc tgcctctact gcattccgcc tgccgcaagc
     9061 gcctgccgaa agcaaagccg gtttcacctt ggcgcaaaaa atggtcggcc gcgcctgcgg
     9121 tctgcccgaa ggacaaggcg tgcgcccggg tacttactgc gaaccgcgta tgacgacggt
     9181 cggctcgcaa gacacgaccg gcccgatgac ccgcgacgag ttgaaagact tggcttgttt
     9241 gggcttctcc gccgatatgg tgatgcagtc tttctgccac accgccgcct atccgaaacc
     9301 tgtcgatgta aaaacccata aagaactgcc cgcctttatt tccacccgtg gcggcgtgtc
     9361 actgcgtccg ggcgacggcg tcatccactc gtggctcaac cgcctgctgc tgcccgatac
     9421 cgtcggcacc ggcggcgaca gccatacccg tttccccatc ggtatttcct tccccgccgg
     9481 ctccggcttg gttgcctttg ccgccgcaac gggcgtaatg ccgctcgata tgcccgagtc
     9541 tgtattggta cgcttcagcg gcaagctgca accgggcgta accctgcgcg atttggtgaa
     9601 cgccatcccg ctgtacgcaa tcaaacaagg tttgctgacc gttgccaaag ccggtaagaa
     9661 aaacatcttc tccggccgca tcctcgaaat cgaaggcctg cctgatttga aagtggaaca
     9721 agcctttgaa ttgaccgacg catccgccga acgctccgcc gccggctgta ccgtgaagct
     9781 caacaaagag ccgattatcg agtacatgaa atccaacgtc gtgttgatga aaaacatgat
     9841 tgccaacggc tatcaagacc cgcgcacttt ggaacgccgc atcaaagcta tggaaaaatg
     9901 gctggcaaat cccgagttgc tcgaagcgga taaagatgcc gaatacgccg ccgtgattga
     9961 aatcaacatg gacgacatca aagagccgat tatcgcctgc ccgaacgacc cggacgacgt
    10021 gtgcttcatg tccgaacgct ccggcaccaa aatcgacgaa gtattcatcg gttcgtgtat
    10081 gaccaacatc ggccacttcc gcgccgcctc caaacttttg gaaggcaagg cagacacccc
    10141 cgtccgcctg tggattgcgc cgccgaccaa aatggacgcg aaacaattgt ccgacgaagg
    10201 acactacggc gtactcggac gtgccggcgc gcgtatggaa atgccgggtt gctccttatg
    10261 tatgggtaat caggcgcaag tacgcgaagg tgcgaccgtt atgtccacct ccacccgcaa
    10321 cttcccgaac cgtttgggta aaaacacctt tgtttacctc ggttcggcgg aattggcagc
    10381 gatttgctcc aaactgggta aaatcccgac cgttgaagaa tatcaagcca atatcggcat
    10441 catcaacgaa cagggcgata aaatctaccg ctatatgaac ttcaacgaaa tcgacagcta
    10501 caacgaagta gccgagaccg tgaacgttta atccccgtca tccgtatgaa gtaagggatt
    10561 gaccgcaatg ccgtctgaac aaccttcaga cggcattgca acattccgct aacccttctt
    10621 tccgcaaacg ctgcaaatac ggcgttcacg cccccacata aaggaaacga cagtgaacct
    10681 gaaaaaccgc cattttctga aacttttaga cttcacgccg gaagaaatca ccgcctacct
    10741 cgaccttgcc gccgaattga aagccgccaa aaaagcaggg cgcgagattc agcggatgaa
    10801 agggaaaaac atcgccctga tttttgaaaa aacctctact cggacgcgct gcgcgtttga
    10861 agtcgccgcg cgcgatcaag gcgcgggagt gacttattta gagccgtccg ccagccaaat
    10921 cgggcataag gaaagcatca aagacaccgc ccgcgtgttg ggcaggatgt acgatgccat
    10981 cgaatatcgc ggtttcggtc aggaagttgt tgaagaattg gcgaaatacg cgggcgtacc
    11041 cgtgttcaac gggctgacca acgagttcca tcccacacaa atgcttgccg acgcactgac
    11101 tatgcgcgaa cacagcggca aacctttgaa ccaaaccgcg tttgcctacg tcggcgacgc
    11161 gcgttacaac atgggcaatt ccctgctgat tttaggggca aaattgggga tggacgtgcg
    11221 tatcggcgca ccgcaaagcc tgtggccgtc tgaaggcatt attgccgccg cacacgccgc
    11281 cgccaaagaa accggcgcaa aaattaccct gaccgaaaac gcgcatgaag ccgtgaagaa
    11341 tgttgatttt attcataccg atgtgtgggt cagcatgggc gagccgaaag aagtctggca
    11401 ggaacgcatc gatttgctga aagattaccg cgttacgccc gaactgatgg cggcatcggg
    11461 caatccgcaa gtcaaattca tgcactgcct gcccgccttc cacaaccgcg aaaccaaagt
    11521 cggcgaatgg atttacgaaa ccttcgggct gaacggtgtg gaagttacag aagaaatatt
    11581 cgaaagcccc gccagcatcg tgttcgatca ggcggaaaac cgtatgcaca cgattaaagc
    11641 ggtaatggtc gcggctctgg gcgactgaca gaactgtgcc tgtttaaatt catccgcaac
    11701 acagataccg tctgaacacg atgttcagac ggtatcca
//
LOCUS       DAWKJW010000046        11734 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.046, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000046 DAWKJW010000000
VERSION     DAWKJW010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11734
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.046"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(42..971)
                     /locus_tag="WJJ54_000910"
     CDS             complement(42..971)
                     /locus_tag="WJJ54_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ7341793.1"
                     /translation="MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLE
                     NHYGTPLFERKSTPLRFTPVGERLLRLAHELIPQVAVAERDLARITEGEAGELRIAVE
                     CHTCFDWLMPAMGEFRPMWPQVELDIVSGFQADPVGLLLQHRADLAIVSEAEKQSGIS
                     FQPLFAYEMVGICAKDHPLAAKTVWEAEDFIGETLITYPVPDEMLDLPKKILIPKNIN
                     PPRRHSELTIAIIQLVASRRGIAALPYWTVMPYLEKGYVVHRQITADGLQSKLYAAIR
                     TEDTDKSYLNNFCQIIRERGFADLPGLSELEPV"
     gene            1103..1852
                     /locus_tag="WJJ54_000911"
     CDS             1103..1852
                     /locus_tag="WJJ54_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEZ7341794.1"
                     /translation="MVLRRDFLTWCNETLQTASFKDYAPNGLQVEGREYIGKIVTSVT
                     ASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLD
                     AHPTLGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVI
                     GKPEREIRRVAWCSGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHH
                     ATERYGVRALAESAAEVFGLEVCHFDENNPA"
     gene            1975..2556
                     /gene="petA"
                     /locus_tag="WJJ54_000912"
     CDS             1975..2556
                     /gene="petA"
                     /locus_tag="WJJ54_000912"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEZ7341795.1"
                     /translation="MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAK
                     AAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQ
                     PEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
                     LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED"
     gene            2575..3924
                     /locus_tag="WJJ54_000913"
     CDS             2575..3924
                     /locus_tag="WJJ54_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HEZ7341796.1"
                     /translation="MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYY
                     FGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMH
                     STGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
                     FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAH
                     IIALHEVGSNNPDGVEIKKNKDENGIPRDGIPFHPYYTVKDILGVVVFLIVFCSVLFF
                     APEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGA
                     AVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARI
                     LSFVYFAFFLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI"
     gene            3939..4727
                     /locus_tag="WJJ54_000914"
     CDS             3939..4727
                     /locus_tag="WJJ54_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEZ7341797.1"
                     /translation="MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQ
                     RGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDA
                     AKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
                     GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVN
                     YLVYMGEPAQLQRKRIGYVVMIFLFAVMLPLAYFLKKEYWKDVH"
     gene            5066..6577
                     /locus_tag="WJJ54_000915"
     CDS             5066..6577
                     /locus_tag="WJJ54_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEZ7341798.1"
                     /translation="MELMTVLLPLAALVSGVLFTWLLMKGRFQGEFAGLNAHLAEKAA
                     RCDFVEQAHGKTVSELAVLDGKYRHLQDENYALGNRFSAAEKQIAHLQEKEAESARLK
                     QSYIELQEKAQGLAVENERLATQIEQERLASEEKLSLLGEARKSLSDQFQNLANTILE
                     EKSRRFTEQNREQLHQVLNPLNERIHGFGELVKQTYDKESRERLTLENELKRLQGLNA
                     QLHSEAKALTNALTGTQNKVQGNWGEMILETVLENSGLQKGREYVVQAASVRKEEDGG
                     TRRLQPDVLVNLPDNKQIVIDSKVSLTAYVRYTQAADADTAARELAAHVASIRAHMKG
                     LSLKDYTDLEGVNTLDFVFMFIPVEPAYLLALQNDAGLFQECFDKRIMLVGPSTLLAT
                     LRTVANIWRNEQQNQNALAIADEGGKLYDKFVGFVQTLESVGKGIDQAQNSFQTAFKQ
                     LAEGRGNLVGRAEKLRLLGVKANKQLARDLTERANETTALSESLEYAAEDEAV"
     gene            complement(6783..7415)
                     /locus_tag="WJJ54_000916"
     CDS             complement(6783..7415)
                     /locus_tag="WJJ54_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEZ7341799.1"
                     /translation="MTLRYEIFPVTPFRQNCTLIWDDESGEAVLTDVGGDVPFLLQAL
                     ANRKLTLTAIWLTHGHLDHAGGVVEMLKTHKVPVLGSHREDEFLLQSLPQTTAQYGFP
                     VSPAFAPNHWLEEGETLKVGRYAFQVLHIPGHTPGHVVFYCAEAELLIAGDVLFYETI
                     GRTDFPRGNHADLINNIRNKLFALPETVQVVAGHGRMTSIGHEKRHNPFF"
     gene            7507..8331
                     /locus_tag="WJJ54_000917"
     CDS             7507..8331
                     /locus_tag="WJJ54_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HEZ7341800.1"
                     /translation="MIKKTIGGIIPIFMAVFIPASAGAADLMLAQEYKDQEIAGWAMS
                     EKLDGVRAYWDGKHLISRQGYAFTPPKGFTAQFPPYPLDGELYSGRGQFEQISATVRS
                     ASSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQIKVRDRQHAMDF
                     LKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDECTVTRHYEGKGRNAGRLGA
                     VGCKNRHGEFRIGSGFKDKDRDNPPKIGTLITYRYRGFTRKGTPKFATFVRVRTDR"
     gene            8400..8963
                     /locus_tag="WJJ54_000918"
     CDS             8400..8963
                     /locus_tag="WJJ54_000918"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HEZ7341801.1"
                     /translation="MTDLETKRLETQAMLENADLLFDQGQCRAALQKVADEITRDLGG
                     KYPLLLPVMGGAVVFTGQLLPLLRFPLDFDYVHVSRYGDKLEGGAFNWKRMPDAEQIR
                     GRHVVVLDDILDEGHTMSAIQAKLLEMGAASCRAAVFANKLIDKPKPIRADYVGLDVP
                     NRYVFGYGMDAAGCWRNLGEIYALDGK"
     gene            9044..9481
                     /locus_tag="WJJ54_000919"
     CDS             9044..9481
                     /locus_tag="WJJ54_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEZ7341802.1"
                     /translation="MIGLLIITHETIGEAYRKLAHHFFPGGLPENVRILGVQPTEDQD
                     DIINNAIAALQEFPDNDGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMVKAV
                     QYSPAAEDLAAFTECVREAAVKGIFAITSAPEDLVCRRSGDAV"
     gene            9550..9819
                     /locus_tag="WJJ54_000920"
     CDS             9550..9819
                     /locus_tag="WJJ54_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEZ7341803.1"
                     /translation="MLKQSIEIINKLGLHARASSKFTQTASQFQSEVWVTKNGSRVNG
                     KSIMGLMMLAAAKGTVIELETDGADEAEAMRALTDLINGYFGEGE"
     gene            9819..11594
                     /gene="ptsP"
                     /locus_tag="WJJ54_000921"
     CDS             9819..11594
                     /gene="ptsP"
                     /locus_tag="WJJ54_000921"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEZ7341804.1"
                     /translation="MSIVLHGVAAGKGIAVGCAHLIARGTEEVPQYDVAEADTDAEAE
                     RFDAAVKATRKELEQLRSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILREQKIN
                     AEWALKQQSDKLAAQFDNMDDAYLRERKQDMLQVVRRIHNNLIGQGNELEVADNLFDE
                     TVLIANDLSPADTVLFKEQRIAAFVTDAGGPTGHTAILGRSLDIPSVVGLHNARKLIT
                     EGETVIVDGINGVLIIAPDESVLNEYRRRAREYRSHKRDLNKLKKTAAATADGVCIEL
                     VGNIESAEDVKPLHNLGADGIGLFRSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSV
                     TIRTVDLGVDKNPRWFGKNSTPNGSLNPALGMTGIRLCLAEPVMFRTQMRAILRAAVH
                     GPVRMMWPMITSVSEVRQCLIHLDTAQRQLAERGDAFGKVGIGCMIEIPSAALTVGSI
                     LKLVDFISVGTNDLIQYILSVDRGDDSVSHLYQPGHPAVLKMLQHVIRTANRMDKDVS
                     VCGEMAGDTAFTRVLLGMGLRRFSMNPNNILPVKNIILHSNVGQLESDIVKVIRCEDE
                     EKSEKLIKQMNSVSVEEEADFKGRK"
BASE COUNT         2827 a         2968 c         3309 g         2630 t
ORIGIN      
        1 tgaaaaaata gaaaaactgc cgggtatggt tgaataaggg gtcagaccgg ttccagttcg
       61 ctcagtccgg gcaaatctgc aaaaccgcgt tcgcgtatga tttggcaaaa attgttcaga
      121 tagctcttgt ccgtatcttc ggtacggatg gcggcataca gtttgctttg cagtccgtcg
      181 gcagtaattt ggcggtggac gacatagcct ttttcaaggt agggcatgac tgtccaatag
      241 ggaagggcgg caatgccacg tctgctggca accagttgga taatggcgat ggtcagttcg
      301 ctgtgtcggc gcggcgggtt gatgtttttc ggaatcagga tttttttggg caaatccagc
      361 atctcgtcgg gaacgggata agtaatcagg gtttccccga taaagtcttc ggcttcccag
      421 acagttttgg cggcaagcgg gtgatctttg gcgcagatgc cgaccatttc gtaggcaaac
      481 agtggttgga agctgatgcc gctttgtttt tccgcttcgg aaacaatggc aaggtcggcg
      541 cggtgttgca gcagcagccc gacgggatcc gcttggaatc ccgatacgat atccagttcg
      601 acttggggcc acatcgggcg gaattcgccc atggcgggca tcagccagtc gaaacaggta
      661 tggcattcga cggcaatccg cagctctccc gcctcccctt ccgtgattcg cgccaaatct
      721 cgttctgcaa cagcaacttg aggtatcagt tcgtgggcga ggcgcagcag cctttcgccc
      781 accggggtaa agcgcaaggg cgtggatttg cgttcgaaca gcggcgtgcc gtagtggttt
      841 tcgagcatac ggatctggtg ggaaagggcg gattgggtaa ggaaaacccg tttggcggca
      901 agggagacgc tgccggtttc ttcaagtgcc agcagggttt tgaggtggcg caattcgata
      961 atggaatcca tgggggcttc agacggcata ttgaaccggc gcatattaaa ataattcata
     1021 tgcgggtgca aatcggaaaa atgtgaattc cggacatttt gcgattagaa tgcccgcttg
     1081 tttaaagcga ttaggaaaaa agatggtatt gcgcagggat tttctgactt ggtgtaatga
     1141 aacgttgcag acggcatcgt ttaaagatta cgcccccaat ggtttgcagg ttgaagggag
     1201 ggaatatatc gggaaaatcg ttacgtcggt aacggcaagc agggcagcga ttgattttgc
     1261 tgtggagcag aaggcagatt tgcttttggt acatcacggt atgttctgga aaaacgagtt
     1321 gccgaccgtt actggttgga aaaaagaacg gattgccgca ctgttacggc acgacatcaa
     1381 tatggcaggc taccatctgc ccctggatgc acatcccaca ctgggcaaca atgcccaact
     1441 cgccgacaga ttgggttttg cgacagaaaa acggttcggc gaacaaaacc tgctcaactc
     1501 gggcagcctg aaacaagcca agacactcgg cgcattggcg gcgcatattg aaacagtttt
     1561 gcaacgtaag cctgtcgtca tcggcaaacc cgaacgcgaa atccgacggg ttgcatggtg
     1621 cagcggcggg gcgcaggggt tttttcagac ggcaatagac gaaggtgtcg atctgtattt
     1681 gacgggggaa atctctgaag cccaatacca ccttgccaat gaaacgggta cggctttcat
     1741 ttcggcaggg catcacgcga cggaacgtta cggcgtacgc gcgctggcag aatcggcggc
     1801 agaggttttc gggttggaag tgtgccattt tgacgaaaac aatccggctt gagtcttgag
     1861 aaatatcata aaactttacc ttattttaaa taatgctttg agtatcactg caaactgggt
     1921 aaaattgcaa cgtttaatgg ctcggtattc ccaaaatatt aggacgactg aataatggat
     1981 aatcaagaaa tcaacaacgg ccgccgccgt ttcctgacac tcgcgacctg cggcgcgggc
     2041 ggagtggcag cattgggtgt ggcaacgccg tttgtggcca gttttttccc ttcggaaaaa
     2101 gccaaggccg ccggtgctgc cgtcgaggtg gatgtcagta aaatcgaagc gggtcagctg
     2161 ctgaccgccg agtggcaagg caaaccgatt tgggtgctca accgtacaga tcagcagctt
     2221 aaagacctga aaggcctgaa cggcgaactt accgatccca attccgatgc ggaacagcag
     2281 ccggagtatg ctaaaaacga gacccgttcg attaagccga acatccttgt cgccatcggt
     2341 atctgcaccc atttgggctg ctcgcccacc ttccgtcccg acattgcccc tgccgatttg
     2401 ggtgcagact ggaaaggcgg cttcttctgc ccctgccacg gttcgaaatt cgacttggcc
     2461 ggccgcgtat ataaaggtgt tcctgccccg accaacctgg ttgtcccacc atataaatac
     2521 ttgagcgaca caactatctt ggtgggcgaa gactaagaat aaggaacgat aattatggca
     2581 aaccaaacca atagcaaagc aaaagcattg ttaggctgga tggacgctcg tttccccctg
     2641 tctaaaatgt ggaatgagca tttggctcaa tactacgcac cgaaaaactt taatttttgg
     2701 tactacttcg gctctttagc cttgcttgtc ctcgtgattc aaatcgtcag cggcattttc
     2761 ctgaccatga actacaaacc cgacggcaac ctgaacgcct accatctgcc tgccgccttt
     2821 accgcagtag aatacattat gcgcgacgtg tccggcggtt ggattatccg ctatatgcac
     2881 tccaccggcg catcgttctt cttcattgtt gtttatctgc acatgttccg tggtttgatt
     2941 tacggttcgt acaaaaaacc ccgtgagttg gtgtggattt tcggctccct gattttcttg
     3001 gcattgatgg cggaagcctt tatgggctac ctgttgcctt ggggtcaaat gtccttctgg
     3061 ggtgcgcagg taattattaa cttgttctcc gccatccctg ttatcggtcc tgatttgtcc
     3121 acttggatcc gcggcgactt taacgtttcc gacgttaccc tgaaccgctt ctttgccctg
     3181 cacgttatcg cggtaccttt ggtattgctc ggcttggttg tggcgcacat catcgccctg
     3241 cacgaagtgg gttctaacaa ccctgacggc gttgaaatca agaaaaacaa agacgaaaac
     3301 ggtatcccgc gcgacggtat cccattccat ccttactaca ccgttaagga catcttgggt
     3361 gtcgttgtat tcctgattgt cttctgttcc gtgttgttct ttgcaccaga aggcggcggc
     3421 tacttcctcg aagcgccgaa cttcgatgct gcgaatgcgc tgaaaacacc tccgcacatt
     3481 gcaccggtat ggtacttcac tccgttctac gccattttgc gtgcgattcc ctcgttcttg
     3541 ggaacacagg tatggggtgt aatcggtatg ggtgcggcag ttgtactgat tgccctgttg
     3601 ccttggctgg ataggggcga ggtgaaatcc gtccgttacc gcggcccgat tttcaaaacc
     3661 gcattggtct tgttcatcat ttcctttatc ggtttgggta ttttgggcgc gatggtggca
     3721 accgatacgc gtactttggt cgcgcgcatc ctgtccttcg tctatttcgc attcttcctg
     3781 ggtatgccgt tctataccaa gctggataaa aacaaaccgg ttcccgaacg cgtaaccatg
     3841 agcaccgcca aacaaaaaat catgttcttt gtttacgtcg gcattaccgc cgtgggtgct
     3901 tacctgtttg caaccaacat ctgatgaggg cagtcaaaat gaaacaagct atgaaaaatt
     3961 ggtttgctgc cttgctgttg gcagtaccca tgggtgcggc atttgcttcg ggcggtcatg
     4021 cacactatga gaaagtcgat atcgatttgc gcgaccaagt cagcctgcag cgcggcgcac
     4081 aaatctttac caactattgc ctgtcctgcc actcggcaag cggtatgcgt ttcaaccgtt
     4141 tgaaagacat cggtttgact gacgaagaaa tcaagaaaaa cctgatgttt accaccgata
     4201 atgtcggcga tgtcatgcat tcggcgatga acccgaaaga tgcggcaaaa tggtttggtg
     4261 ctgctccgcc cgatttgaca ttgattgcgc gttccaaagg tgcagactac ctttacgcct
     4321 atatgcgcgg cttctataaa gatccgaccc gtccgagcgg ctggaacaat accgtatttg
     4381 ataaagtcgg tatgcctcac ccgctgtggg aacagcaagg cgttcaagcc gttgagttgg
     4441 atgccaaagg tcagccggtt atggtaaaag acgaacacgg cgagatgaag cctaagctgt
     4501 attgggaatc taccggtttg cacagccgcc gtctgcctaa cggcaaagtg atccaaaaag
     4561 agtacgacgc atatgtacgc gatttggtca attaccttgt gtacatgggc gaacctgcac
     4621 aactgcaacg caaacgtata ggctatgtcg tgatgatttt cctatttgcg gttatgctgc
     4681 ctttggcgta tttcctgaaa aaagaatatt ggaaagacgt acactaagcg tttggaacaa
     4741 aagggcaaat cctttagggt ttgccctttt ttcattttgc ctgccgtttg aaaagcctga
     4801 atccgtatgc cgtctgaaca tagctgcaac atttcagacg gcatcattct aaaaatgtca
     4861 gacatcggga acttaatcag ggtttgcggc ggatggatat tgaattagga aaaggcctga
     4921 aaccgcaagc agcatggtaa ggcgatgtcg aacaggttta aagccaatcc gctatatttt
     4981 ttggagctat gtcgaacaaa caggtagaat cggaataagc ggcggttttg tccggtgtga
     5041 aaatgtttga atattaggat gattgatgga actgatgact gttttgctgc ctttggcggc
     5101 gttggtgtcg ggcgtgttgt ttacatggtt gctgatgaag ggcaggtttc agggcgagtt
     5161 tgccggtttg aacgcgcacc tggcggaaaa ggcggcaaga tgtgattttg tcgaacaggc
     5221 gcacggcaaa accgtgtcgg aattggcggt gttggacggg aaatatcggc atttgcagga
     5281 cgaaaattat gctttgggca accgtttttc cgcagccgaa aagcagattg cccatttgca
     5341 ggaaaaagag gcggagtcgg cgcggctgaa gcagtcgtat atcgagttgc aggaaaaggc
     5401 acagggtttg gcggttgaaa acgaacgttt ggcaacgcaa atcgaacagg aacgccttgc
     5461 ttctgaagag aagctgtcct tgctgggcga ggcgcgcaaa agtttgagcg atcagtttca
     5521 aaatcttgcc aacacgattt tggaagaaaa aagccgccgt tttaccgagc agaaccgcga
     5581 gcagctccat caggttttga acccgttgaa cgaacgcatc cacggtttcg gcgagttggt
     5641 caagcaaacc tatgataaag aatcgcgcga gcggctgacg ttggaaaacg aattgaaacg
     5701 gcttcaagga ttgaatgcgc agctgcacag cgaggcaaag gcactgacca acgcgctgac
     5761 cggtacgcag aacaaggttc agggcaattg gggcgaaatg attctggaaa cggttttgga
     5821 aaattccggc ctccagaaag ggcgcgaata tgtggttcag gcggcatccg tccgaaaaga
     5881 ggaagacggc ggcacgcgcc gcctccagcc cgacgttttg gtcaacctgc ccgacaacaa
     5941 gcagattgtg attgactcca aggtctcgct gacagcttat gtgcgctaca cgcaggcggc
     6001 ggatgcggat acggcggcac gcgaactggc ggcacacgtt gccagcatac gcgcgcatat
     6061 gaaaggcttg tcgctgaagg attacaccga tttggaaggt gtgaacacat tggatttcgt
     6121 ctttatgttt atccctgtcg aaccggccta cctgttggcg ttgcagaatg acgcgggctt
     6181 gttccaagag tgtttcgaca aacggattat gctggtcggc cccagtacgc tgctggcgac
     6241 tttgcggacg gtggcgaata tttggcgcaa cgagcagcaa aaccaaaacg cgctggcgat
     6301 tgcggacgaa ggcggcaagc tgtacgacaa gtttgtcggc tttgtacaga cgctcgaaag
     6361 cgtcggcaaa ggcatcgatc aggcgcaaaa cagctttcag acggcattca agcaacttgc
     6421 cgaagggcgc gggaatctgg tcggccgcgc cgagaaactg cgtctgttgg gtgtgaaggc
     6481 aaacaagcag cttgcacgcg atttgaccga acgtgccaat gaaacaacgg cgttgtcgga
     6541 atctttggaa tatgcggcag aagatgaagc agtctgactt gtgcggaaaa gcttgtttca
     6601 gcaggggcgg gaatgccgaa agcgcggcgt aactgtaccg gttctgattt ggggttggtt
     6661 tgaagtactt accaaagcct tgtccggcga ggtacaccgg caaggcggcg gttgtctgag
     6721 ccttttgcgt ttcagacggc atcagtgcag atgacgccgt ctgaagaccg tagtgaagtc
     6781 ggttagaaaa acggattgtg ccgtttttcg tgtccgatgg aagtcatacg cccgtgtccg
     6841 gcgacaactt gcacggtttc ggggagggcg aataatttgt tgcggatatt attgattaag
     6901 tcggcgtggt tgccgcgcgg aaaatcggtt ctgcctatgg tttcgtaaaa cagcacgtcg
     6961 cccgcaatca gcagctccgc ttcggcacaa tagaaaacca cgtgtcccgg cgtgtgcccc
     7021 ggaatatgca gcacttggaa ggcgtagcgt ccgactttga gcgtttcgcc ttcttcgagc
     7081 caatggttcg gcgcaaaggc gggcgagacg gggaatccgt attgcgcggt ggtttgcggc
     7141 agcgattgga gcaggaattc atcttcgcgg tgcgaaccga ggacagggac tttatgcgtt
     7201 ttcaacattt cgaccacgcc gcccgcgtga tcgagatggc cgtgcgtcag ccagattgcc
     7261 gtgagcgtaa gtttgcggtt tgccaacgct tgcagcagga acggcacatc gccgccgaca
     7321 tcggtcagga cggcttcgcc actttcgtcg tcccaaatca gggtgcagtt ttggcggaag
     7381 ggggtaacgg ggaagatttc gtaacgtagg gtcatcggcg tgttcctaaa cggtttttca
     7441 gacggcatcg ggtttgccgt ttgttttatg gcggtttgcc gcccgttttg atattggggg
     7501 aatcagatga ttaagaagac aatcggcggc atcataccga tttttatggc ggttttcatc
     7561 cctgcatcgg caggcgcggc ggatttgatg ttggcgcagg aatacaaaga ccaagagatt
     7621 gcaggctggg caatgagcga gaaactcgac ggcgtgcgcg cctattggga cggaaagcac
     7681 ctgataagcc gtcagggcta cgcgtttacg ccccccaaag gctttaccgc gcagtttccg
     7741 ccttatcctt tggacggcga attgtatagc ggacgcggtc agttcgagca gatttccgct
     7801 accgtgcgtt ctgcttcttc agactggcgc ggtatccgcc tgcacgtttt cgatgtaccc
     7861 aaggcgcagg gcaatctcta ccaacgtttg gcagtcgcaa cgcagtggct gaaaacgcat
     7921 ccgaacgcgc cgattaccat catcccacaa atcaaagtgc gcgaccggca gcacgcgatg
     7981 gactttttaa aacaaatcga agcgcagggc ggcgaaggcg tgatgctgcg tcagcccgaa
     8041 tcccgttaca gcggcggcag gagcagccaa ttattgaagc tgaaaagcca atacgacgac
     8101 gaatgcacgg taacgcggca ctatgagggc aaagggcgaa acgccggacg gctgggcgcg
     8161 gtcggctgca aaaaccgaca cggcgaattc cgcatcggca gcggtttcaa agacaaagac
     8221 cgcgacaacc cgcccaaaat cggcacactg attacctacc gctaccgtgg ttttacgcgg
     8281 aaaggcacgc cgaaatttgc cacatttgtg cgcgtgcgta ccgaccgctg agcaggacgg
     8341 ttcagacggc agccgatact ttggtttata attttccttt taccgaccga ttccgacata
     8401 tgaccgattt agaaaccaaa cgccttgaaa cacaggcgat gcttgaaaac gccgatcttt
     8461 tgttcgacca aggccaatgc cgtgccgcac tgcaaaaagt ggcggacgag attacgcgcg
     8521 atttgggcgg caaatatccg ctgctgctgc ccgtgatggg cggcgcggtg gtgtttacgg
     8581 ggcagttgtt gccgctgttg cgttttccct tagattttga ttatgttcac gtttcccgtt
     8641 acggcgacaa gctggagggc ggcgcgttca actggaagcg tatgcccgat gcggaacaaa
     8701 tccggggcag gcacgtcgtc gtgctggacg atattttgga cgaagggcat acgatgtccg
     8761 ccattcaagc caaacttttg gaaatgggtg cggcaagctg ccgtgcggcg gtgttcgcca
     8821 acaagctgat tgacaaaccc aagcctatcc gagccgatta tgtcggactg gatgtgccga
     8881 accgttatgt tttcggttac ggcatggatg cggcgggctg ctggcgtaat ttgggcgaga
     8941 tttacgcatt ggacggaaaa taaggacgcg atgccgtctg aaggcctttc agacggcatc
     9001 gcgcccatac gccggcagga taatgaagaa caggacgcat aatatgatag ggcttttaat
     9061 catcacacac gaaaccatag gcgaagccta ccgcaagctg gcacatcatt ttttcccggg
     9121 cgggctgcct gaaaacgtcc gcatactcgg cgtgcagccg acggaagacc aagacgacat
     9181 catcaacaac gccattgccg cgcttcagga gtttcccgac aacgacggcg tgctgattat
     9241 gaccgatatt ttcggcgcga ccccctgcaa tgcagcccgc cgcctcgtgc gcgaaaacaa
     9301 atcggcgatt ttgaccgggc tgaacgcgcc gatgatggtt aaggccgtcc aatattcgcc
     9361 ggcggcggaa gaccttgccg cctttaccga atgcgtcagg gaggcggcgg taaaaggcat
     9421 tttcgccatc acgtccgcgc ccgaagattt ggtgtgccgg cgcagcggcg atgccgtctg
     9481 aagaagcggc agggcaggaa aacattttaa acggcgtctg ctgccgatat acataacacg
     9541 ggaatcgaaa tgctcaaaca atccatcgaa atcatcaaca aactcggact tcacgcccgt
     9601 gcctccagca aattcaccca aaccgcgtct cagtttcaaa gcgaagtctg ggtaacgaaa
     9661 aacggcagcc gcgtcaacgg caaaagcatc atggggctga tgatgctcgc cgccgccaag
     9721 ggtacggtca tcgagctgga gacggacggc gcggacgagg cggaagcgat gcgcgccctg
     9781 accgacttaa tcaacggcta cttcggcgag ggcgaataat gagtatcgtg ctgcacggcg
     9841 tggcggcggg caaaggcatt gccgtcggtt gcgcccacct gattgcgcgc ggtacggagg
     9901 aagtgccgca gtatgatgtt gcggaggcgg acaccgatgc cgaagccgaa cgtttcgatg
     9961 ccgccgtcaa agccacgcgc aaagagttgg aacagctccg cagcgcgatt cccgaaaacg
    10021 ccccgaccga gttgggcgcg ttcatctcgc tgcacctgat gctcttgacc gatgttacct
    10081 tgtcgcgcga acccgtcgat attttaaggg aacaaaaaat caacgccgag tgggcattga
    10141 agcagcagag cgacaaactc gccgcccaat tcgacaatat ggacgatgcc tatttgcgcg
    10201 aacgcaagca ggatatgctg caagtcgtcc gccgcatcca caacaacctg atcgggcagg
    10261 gcaacgagtt ggaagttgcc gacaacctgt ttgacgaaac cgttctgatt gcaaacgacc
    10321 tttcgcccgc cgacacggtt ttgtttaaag agcagcgcat tgccgccttc gttaccgatg
    10381 ccggcggccc caccgggcat acggcgattt tgggcaggag cttggacatc ccgtccgtcg
    10441 tcgggctgca caacgcgcgc aaactgatta ccgagggcga aacggtcatt gtggacggta
    10501 tcaacggcgt gttgattatc gcgccggatg agtcggtgtt gaacgaatac cgccgccgtg
    10561 cccgcgaata ccgcagccac aaacgcgatt tgaacaagct caaaaaaacc gccgccgcca
    10621 ccgctgacgg ggtctgcatc gagcttgtgg gcaatataga atccgccgaa gacgtgaaac
    10681 cgctgcacaa cctcggcgca gacggcatcg ggctgttccg cagcgagttt ctttacctga
    10741 accgcgatac gatgccgtct gaagacgagc agtacgaagt gtacagcgcg attgtcaaaa
    10801 aaatgaaagg caaaagcgta acgatacgga cagtcgattt gggtgtggac aaaaacccgc
    10861 gctggttcgg gaaaaacagc acgcccaacg gcagcctcaa ccccgcgctg ggcatgaccg
    10921 gcatccgcct gtgccttgcc gaaccggtca tgttccgcac ccagatgcgc gccatcctcc
    10981 gtgcggcggt acacggcccc gtgcggatga tgtggccgat gattacctcc gtatccgaag
    11041 tgcgccagtg cctcatccac ctcgacaccg cgcaacgcca gcttgccgaa cgcggcgatg
    11101 ccttcggtaa agtcggcatc ggctgtatga ttgaaattcc gtctgccgcg ctgaccgtcg
    11161 gcagtatttt gaaactggtc gatttcatct ccgtcggtac caacgacctg attcaataca
    11221 tcttgtccgt cgatcgcggc gacgacagcg tcagccacct ctaccagccc ggccatcccg
    11281 ccgtgctgaa aatgctgcaa cacgtcatcc gtaccgccaa ccgcatggac aaagacgtat
    11341 ccgtatgcgg cgagatggcg ggcgataccg cgtttacccg cgttttattg ggtatggggc
    11401 tgcgccgttt ttccatgaac cccaacaaca tcctgcccgt caaaaacatc attctgcaca
    11461 gcaatgtcgg acagctcgaa agcgatattg tgaaagtcat ccgctgcgaa gacgaagaga
    11521 agtcggaaaa gctgatcaaa cagatgaaca gcgtgtctgt cgaggaagaa gccgacttca
    11581 aggggcggaa ataaatacgg caggtaaaaa atagaaatac ttaacaatgc ccgcaatctg
    11641 aaattttgcc attcttgcaa aatagaaaac cgaaacagaa acccaaaatc ggccattccc
    11701 tcaaaaacag aaaaccaaaa tcagaaacct aaaa
//
LOCUS       DAWKJW010000047        11066 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.047, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000047 DAWKJW010000000
VERSION     DAWKJW010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11066)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11066)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11066
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.047"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(60..1616)
                     /gene="dnaA"
                     /locus_tag="WJJ54_000922"
     CDS             complement(60..1616)
                     /gene="dnaA"
                     /locus_tag="WJJ54_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEZ7341805.1"
                     /translation="MTLAEFWPLCLRRLHDMLPQGQFAQWIAPLTVGEEGGVWVVYGK
                     NQFACNMLKSQFAGKIEAVREELAAGRSAFVFKPGEGVCYEMAAVEGAVEPAEPSLHA
                     GSEEMPVQEVLLDELPSEEPVKPAASKTAADILAERMRNLPHEPRQAAGSASRPESAA
                     VAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAESPGQSYNPF
                     FLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQY
                     KQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKS
                     RFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNR
                     VGASSRFMNRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
                     TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQD
                     YEKLLILIQN"
     gene            1908..2042
                     /gene="rpmH"
                     /locus_tag="WJJ54_000923"
     CDS             1908..2042
                     /gene="rpmH"
                     /locus_tag="WJJ54_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011289924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEZ7341806.1"
                     /translation="MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV
                     "
     gene            2045..2410
                     /locus_tag="WJJ54_000924"
     CDS             2045..2410
                     /locus_tag="WJJ54_000924"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEZ7341807.1"
                     /translation="MDYRFGRQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDH
                     PRIGLVVGKKTAKRANERNYMKRVIRDWFRLNKNRLPPQDFVVRVRRKFDRATAKQAR
                     AELAQLMFGNPATGCRKQA"
     gene            2475..2696
                     /gene="yidD"
                     /locus_tag="WJJ54_000925"
     CDS             2475..2696
                     /gene="yidD"
                     /locus_tag="WJJ54_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEZ7341808.1"
                     /translation="MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKK
                     YGAFKGGRLAIKRIARCHPFGGHGHDPVP"
     gene            2869..4506
                     /gene="yidC"
                     /locus_tag="WJJ54_000926"
     CDS             2869..4506
                     /gene="yidC"
                     /locus_tag="WJJ54_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEZ7341809.1"
                     /translation="MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTA
                     SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFILFGDGKEYT
                     YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKG
                     SYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKV
                     SFSDLDDDAKSSKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGECSIDI
                     KRRNDKLYSASVSVPLAAIPAGAKAETAVNLYAGPQTTSVIANIADNLQLAKDYGKVH
                     WFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQA
                     IKEKYGDDRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAP
                     WLGWITDLSRADPYYILPIIMAATMVAQTYLNPPPTDPMQAKMMKIMPLIFSVMFFFF
                     PAGLVLYWVVNNLLTIAQQWHINRSIEKQRAQGEVVS"
     gene            complement(4587..5300)
                     /locus_tag="WJJ54_000927"
     CDS             complement(4587..5300)
                     /locus_tag="WJJ54_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEZ7341810.1"
                     /translation="MVSPVLYLIPTPLGTPDTPCLLPHEQRAVVGLTDFVVEAEKTAR
                     AHLKHLGVTTPIRELNLQTLNEHTDLKTLPELLKPLQEGRSIGIVSEAGCPAVADPGA
                     NLVALAHKHGFEVRPLVGPSSLLLALMASGANGQSFAFKGYLPSEKNERIQSLKALEQ
                     RSRQQNETQLFIETPYRNDALLADAVENLHPETRLCVATDLTLPTQEIISQTIAQWRK
                     RKEMPNLKKRPTIFVMYAG"
     gene            complement(5359..5949)
                     /gene="maf"
                     /locus_tag="WJJ54_000928"
     CDS             complement(5359..5949)
                     /gene="maf"
                     /locus_tag="WJJ54_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation protein Maf"
                     /protein_id="HEZ7341811.1"
                     /translation="MGLELPLILGTSSVFRREQMERLGIAFQAASPDFDETPMLGESA
                     PQTALRLAEGKARSLAGRFPEALIVGADQVAWCDGRQWGKPMNLANAHKMLMHLSGRE
                     IEFYSAVVLLNTVTGRMQRHIDKTVVVMRKLDELHILRYLEREPDAVYCSCALKSEAL
                     GALLIERIESTDPNALIGLPVFRLVDFLKNEGVEVL"
     gene            6097..6600
                     /locus_tag="WJJ54_000929"
     CDS             6097..6600
                     /locus_tag="WJJ54_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEZ7341812.1"
                     /translation="MSDPNLIDPEIFAAEGQNLQGSFLLEELDERVSSHDYPADRQTK
                     ISFTLTGGRDRLQRLFLDLNVKADMPLICQRCIKPMPFMLDESSRIVLFSNEESLDES
                     MLADEELEGILIEKELDVRTLVEDQILMSLPFSPRHEDCGDNGTLEEVNRDKPNPFAV
                     LAGLKSS"
     gene            6634..6813
                     /gene="rpmF"
                     /locus_tag="WJJ54_000930"
     CDS             6634..6813
                     /gene="rpmF"
                     /locus_tag="WJJ54_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009889986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEZ7341813.1"
                     /translation="MAVQQNKKSPSKRGMHRSHDALTAPALSVDSTTGEVHRPHHISP
                     NGMYRGRKVVKAKGE"
     gene            6988..7515
                     /locus_tag="WJJ54_000931"
     CDS             6988..7515
                     /locus_tag="WJJ54_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HEZ7341814.1"
                     /translation="MKQKIWYTYDDIHRVIKALAEKIRNADIKYDAMIAIGGGGFIPA
                     RMLRCFLEIPIYAVTTAYYDSDNEGQVTEEVKKVQWLDPVPEALRGKNVLVVDEVDDS
                     RVTMEFCLTELLKEDFGTIGVAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDA
                     LDIDEHNRLAEAGRG"
     gene            7603..8658
                     /gene="plsX"
                     /locus_tag="WJJ54_000932"
     CDS             7603..8658
                     /gene="plsX"
                     /locus_tag="WJJ54_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEZ7341815.1"
                     /translation="MITLAVDAMGGDQGLAVTVPGATAFLQAHPDVRLIMTGDETQLR
                     QALTAAGAPKERIDICHTTQVVGMDESPQSALKNKKDSSMRVAINQVKEGKAQAAVSA
                     GNTGALMATARFVLKTIPGIERPAIAKFLPSDTDHVTLALDLGANVDCTPEQLAQFAV
                     IGSELVHALHPQKGQPRVGLVNVGTEDIKGTDTVKQTYKLLQNSKLNFIGNIESNGIL
                     YGEADVVVADGFVGNVMLKTIEGAVKFMSGAIRREFQSNLFNKLAAVAALPALKGLKN
                     KLDPRKFNGAILLGLRGIVIKSHGGTDETGFRYALEEAYHEAKSASLSKIEQGVAEQL
                     AALEAAKAVQNEIAADL"
     gene            8796..9068
                     /locus_tag="WJJ54_000933"
     CDS             8796..9068
                     /locus_tag="WJJ54_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HEZ7341816.1"
                     /translation="MKTLEKRMKALDKRMMKLGKSLEGRLDARLIESALDYIHYSERF
                     LAFEILCTYIEDFDIRLTEQESQEISFIDKEFRTESTLDYPIKSTG"
     gene            9074..9490
                     /locus_tag="WJJ54_000934"
     CDS             9074..9490
                     /locus_tag="WJJ54_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341817.1"
                     /translation="MKTSTVVFGGFFITDNGERIQIPVLENPGIKEINHFFSISNFEK
                     KAGVLVFRIIPEPEFGNTELTIYFEKGYYLPMIQTILEGGDIEVKHLKTENYSGNTME
                     IWGDSYPIEHISKNISTIQNIISEFMIQKQTPAPII"
     gene            9510..9713
                     /locus_tag="WJJ54_000935"
     CDS             9510..9713
                     /locus_tag="WJJ54_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341818.1"
                     /translation="MPSEACLVFRRHFLRLKQRIGNPALPVHGNLHLKTICIPNHTPI
                     PVSVICTLPVLGNHRFFAYNSRI"
     gene            9740..10702
                     /locus_tag="WJJ54_000936"
     CDS             9740..10702
                     /locus_tag="WJJ54_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HEZ7341819.1"
                     /translation="MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRH
                     IAAENEKTSDLAAEAARRALDAAGLDSGEIDLIIVATATPDMQFPSTATIVQQKLGIT
                     NGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFG
                     DGAGAVVLSAADKPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKF
                     AVKMLSKIADDVIEEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHG
                     NTSAASIPLALDTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY"
     gene            10749..>11066
                     /locus_tag="WJJ54_000937"
     CDS             10749..>11066
                     /locus_tag="WJJ54_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HEZ7341820.1"
                     /translation="MKRQAFFKPIACAAFLSAVSLRLPVLGACYAILSLYAFALYGID
                     KRRAVRGKRRIPEHRLLLPALFGGWAGAYLGSRIFRHKTAKKRFVVLFRLTVSGNVLA
                     TLIL"
BASE COUNT         2872 a         3290 c         2555 g         2349 t
ORIGIN      
        1 ctatatcttt acccttcgga cggcatgggc aatatcatgt cgtctgaaaa cgttttccat
       61 cagttttgaa tcagaatcag cagcttttca taatcctgag ccaattccgg atcttcttcg
      121 cgcagtttcg ccactgccct gatgccgtgc ataacggtcg tatgatcgcg cccgccaaac
      181 gaatcgccga tagacggcag gctcaaagtg gtcagttctt tggtcaggct catcgccacc
      241 tggcgcggac gggcaatgtt gcgcgtgcgt tttttgccga gtacgtcgct gattttgatg
      301 cggtaatatt tggcaacggc atcaataatg atatcggcgg taatgacctt atgcttctcg
      361 gcaataatgt cctgcaaagc ggtacgcgcc aaatcgatgt cgatgacggg acggttcata
      421 aagcggctgc tcgctccgac acggttaaac gcgccttcaa gctcgcgcac gttggaacgg
      481 atcagattgg caatgaacag cgcggcttcg tcttcaatac tgatgcccgc cgcttccgcc
      541 tttttctgca aaatggcgat gcgcatttcc aattcgggcg gctcgagttc caaagtcagt
      601 ccccatgaaa aacgggattt gaggcggtcg tccatgcctt cgattttggc gggtaaaaca
      661 tcgcaagtga ggatcagctg ttttttctcg ttgtggaaat ggttgtacag atagaaaaac
      721 tcttccatcg tacggtcttt tcctttaata aactgaatat cgtcgataat cagcaggtcg
      781 tattgcttgt attgctgctt gaatacgtca taggtattgt tgcgaaccgc cttcataaag
      841 ctgcggatat agtcgtccga atgcatatag cgcactttgg catcgggacg gtttttcaac
      901 agttcgttgc cgaccgcctg cacaaggtgg gttttaccca aacccgtact gccatagagg
      961 aagaacgggt tataactctg tcccggactt tccgcaatcg cctgcgcggc ggcagctgca
     1021 aggcggttgc ccttaccttc gaccaatgtg tcgaacgtat agtccggcga cagattggtc
     1081 tgctcgtaac gcgcctcttc cgcatcgcgc tgtgcatccg tccgtgcttt ggcaactgcc
     1141 gccgattccg gccgggaagc agacccggca gcctgacgcg gctcgtgcgg caggtttctc
     1201 atacgttctg ccaaaatatc cgccgccgtt ttcgacgcag cgggtttgac aggctcttca
     1261 gacggcagct cgtccaacag aacctcctgc acaggcatct cctccgaccc cgcgtgcaag
     1321 gacggctcgg caggttcgac agcaccttca accgccgcca tctcataaca cacgccttct
     1381 cccggtttga atacgaaggc ggaacggccg gcagccaact cttccctcac cgcttctatt
     1441 tttccggcaa actggctctt gagcatattg caggcaaact ggttcttgcc gtacaccacc
     1501 catacgccac cctcctcacc gacggtaagg ggcgcaatcc attgcgcaaa ctgcccttga
     1561 ggcaacatat cgtgaagacg gcggaggcac agcggccaaa actctgctaa tgtcatggat
     1621 aggctcgaat cggtaaaaat gaaatcgaaa acaaagaaaa tataatattt tcaaaaagaa
     1681 aacaaatctg ttgaacgcac atcggttcaa aacgcgactg cccgattata ccgactcacg
     1741 aatattttat ccacaacccg tgcaaaaatt tatccacaga aaggcggcga aaatccgcag
     1801 gcaatcgggc aatcttcctg caaagtttct atattgattg acaaaagcgg caaattggag
     1861 tgtaattcac ggtttaatta tctacccatt ctattttagg aaacatcatg aaacgcactt
     1921 atcaaccttc cgttaccaaa cgcaaacgca cccacggctt cctggtgcgc tccaaaacac
     1981 gcggcggccg cgcagtattg gccgcacgcc gtgccaaagg ccgcaaacgc ctggcggtat
     2041 aattttggac taccgcttcg gaaggcagta ccgcttgtta aaaacggatg atttttcatc
     2101 cgtttttgca ttcagaaacc gccgcagccg cgacctgctg caagtttcgc gttcaaacgg
     2161 caacgggctg gaccatcccc gcatcggtct ggtggtcggc aaaaaaaccg ccaaacgcgc
     2221 caacgaacga aattatatga agcgcgtcat ccgcgactgg ttcagattga acaaaaaccg
     2281 gctgccgccg caggatttcg tcgtgcgcgt ccgccgtaaa ttcgacaggg ctaccgcaaa
     2341 acaggcaagg gcggaactgg cacaactcat gttcggcaac cccgcaaccg gatgcaggaa
     2401 acaggcatga tcagaacggt actctgcagg caaggttcag acggcaacgg gtttcccata
     2461 caaggaacat cccgatgaac ttcctattgt ccaaactcct gctgggactg atacggttct
     2521 accaatattg catcagcccg ctgattccgc cgcgctgccg ttatacgccg acctgttcgc
     2581 aatacgcggt cgaagcggtc aaaaaatacg gcgcattcaa aggcggccgg ctcgccatca
     2641 agcgcattgc acgctgccac cctttcggcg gacacggaca cgaccccgtc ccctgaaccg
     2701 ccccgccgcc cgaactgcac gctttccttt tatttcccat cggtttctat ataatgccgt
     2761 ctgaaacttc gggctggcgg cacgaccgtc gggtatgaag cccgccctta ttccccgtct
     2821 atcggaacac gcaacctgcg gcatttccga ccattcagga aactctatat ggattttaaa
     2881 agactcacgg cgtttttcgc catcgcgctg gtgattatga tcggctggga aaagatgttc
     2941 cccactccga agcccgtccc cgcgccccaa caagcagcac aacaacaggc cgtaaccgct
     3001 tccgccgaag ccgcgctcgc gcccgcaacg ccgattaccg taacgaccga cacggttcaa
     3061 gccgtcattg atgaaaaaag cggcgacctg cgccggctga ccctgctcaa atacaaagca
     3121 accggcgacg aaaataaacc gttcatcctg tttggcgacg gcaaagaata cacctacgtc
     3181 gcccaatccg aacttttgga cgcgcagggc aacaacattc taaaaggcat cggctttagc
     3241 gcaccgaaaa aacagtacag cttggaaggc gacaaagttg aagtccgcct gagcgcacct
     3301 gaaacacgcg gtctgaaaat cgacaaagtt tatactttca ccaaaggcag ctatctggtc
     3361 aacgtccgct tcgacatcgc caacggcagc ggtcaaaccg ccaacctgag cgcagactac
     3421 cgcatcgtcc gcgaccacag cgaacccgag ggtcaaggtt actttaccca ctcttacgtc
     3481 ggccctgttg tttatacccc tgaaggcaac ttccaaaaag tcagcttttc cgatttggac
     3541 gacgatgcca aatccagcaa atccgaagcc gaatacatcc gcaaaacccc gaccggctgg
     3601 ctcggtatga tcgaacacca cttcatgtcc acctggatcc tccaacccaa aggcggacaa
     3661 agcgtttgcg ccgcaggcga atgcagcatc gacatcaaac gccgcaacga caagctgtac
     3721 agcgcaagcg tcagcgttcc ccttgccgcc atcccggccg gcgcgaaagc cgaaaccgcc
     3781 gtcaacctct acgccggccc gcagaccaca tccgtcatcg caaacatcgc cgacaacctg
     3841 caactggcca aagactacgg caaagtacac tggttcgcct cccccctctt ttggcttttg
     3901 aaccaactgc acaacatcat cggcaactgg ggctgggcga ttatcgtttt aaccatcatc
     3961 gtcaaagccg tactgtatcc attgaccaac gcctcttacc gctctatggc gaaaatgcgt
     4021 gccgccgcac ccaaactgca agccatcaaa gagaaatacg gcgacgaccg tatggcgcaa
     4081 caacaggcga tgatgcagct ttacacagac gagaaaatca acccgctggg cggctgcctg
     4141 cctatgctgt tgcaaatccc cgtcttcatc ggattgtatt gggcattgtt cgcctccgta
     4201 gaattgcgcc aggcaccttg gctgggttgg attaccgacc tcagccgcgc cgacccctac
     4261 tacatcctgc ccatcattat ggcggcaacg atggtcgccc aaacttatct gaacccgccg
     4321 ccgaccgacc cgatgcaggc gaaaatgatg aaaatcatgc ctttgatttt ctccgtcatg
     4381 ttcttcttct tccctgccgg tctggtattg tactgggtgg tcaacaatct cttaaccatc
     4441 gcccagcaat ggcacatcaa ccgcagcatc gaaaaacaac gcgcccaagg cgaagtcgtt
     4501 tcctaaatgc cgcagcatga aaaatgccgt ctgaaacctg ttcagacggc atttttattg
     4561 tccaccccct atcgggacgg aaatcttcaa cccgcataca tcacaaaaat cgtcgggcgt
     4621 tttttcaaat tcggcatttc ttttcttttt cgccactgag caatcgtctg gctgatgatt
     4681 tcctgagtcg gtaaggtcaa gtccgtagcc acacataagc gcgtttcagg atgcaggttt
     4741 tccaccgcat ccgccaacaa cgcatcgttg cgatatggcg tttcgataaa cagctgcgtt
     4801 tcattctgct ggcgcgaacg ttgttccaaa gccttcaaac tctgaatccg ctcatttttt
     4861 tcagacggca aataaccctt aaacgcaaaa ctctgcccat tcgcacccga agccatcagc
     4921 gccagcaaca agctggacgg accgaccaaa ggccgtactt caaaaccgtg tttatgcgcc
     4981 aatgccacca aattcgcacc cggatcagcc acagccgggc aacccgcctc actgacaatg
     5041 cctatactgc gcccttcttg caaaggtttc agcaattccg gcaaagtctt caaatccgtg
     5101 tgttcattca atgtttgcag attcagctcg cggataggcg tagtcacgcc caaatgtttc
     5161 aaatgcgcgc gcgccgtttt ttccgcttcc acgacaaaat ccgtcagccc gacaaccgcc
     5221 cgttgttcat gcggcaacag gcacggcgta tcgggcgtac ccaaaggcgt aggaatcaaa
     5281 tacaaaacag gagacaccat tccctcactc atcggttaaa aatgccgtct gaacccttca
     5341 gacggcataa acgggcagtt acagaacctc cacgccctca tttttcaaaa aatcaaccag
     5401 acggaaaacc ggcaaaccga ttaaagcatt cggatcggta ctctcaatcc tttcgatcaa
     5461 caatgcaccc aaagcctcgc tcttcaacgc acacgagcaa taaaccgcat caggctcgcg
     5521 ctccaaatag cggaggatgt gtagctcgtc caacttcctc atcacgacca ccgtcttatc
     5581 gatatgccgc tgcatcctgc ccgtaaccgt atttagcaga acgaccgcgc tgtaaaactc
     5641 aatctccctg ccgctcaaat gcatcaacat cttgtgcgca ttagcaaggt tcatcggctt
     5701 gccccactgc ctgccgtcgc accacgccac ctggtccgca ccgacaatca acgcctctgg
     5761 gaaacgcccg gccaacgacc gcgccttacc ctcggcaagg cgcaatgccg tctgaggggc
     5821 agactccccc aacatcggcg tttcgtcaaa atcgggggac gccgcctgaa aggcaatgcc
     5881 gagcctttcc atctgttcgc ggcggaaaac cgaactcgta cccaaaatca aaggcagttc
     5941 caaacccatc ccatcctcct taccgttgaa aacacgcccg aaggggcggt aaaatccagc
     6001 catgcgccga aacacggata cccgccttcg gcgtaccgca acatttttct taaaaatatt
     6061 gacgttagaa catctaaatt atatcatatc tcgtttatgt cagaccctaa tttgattgac
     6121 ccggaaattt tcgccgccga agggcagaat ctgcaaggca gttttctgct ggaagaattg
     6181 gatgaacgcg tcagttcgca cgattatccc gccgacaggc agaccaaaat atcgtttaca
     6241 ctgaccggcg gtcgcgatcg gctgcaacgc ctgttcctcg acctgaacgt caaagccgat
     6301 atgcccctga tttgccagag atgtatcaaa cccatgccgt tcatgcttga tgaaagcagc
     6361 cgtatcgtcc tgttttccaa cgaagagtcc ttggacgaat ccatgcttgc cgacgaagaa
     6421 ctcgaaggca tactgattga aaaagaactc gacgtgcgca cattggtaga agaccaaatc
     6481 ctgatgtccc tgcccttttc gccgcgacac gaagactgcg gcgacaatgg gacactggaa
     6541 gaagtcaatc gggacaaacc caaccccttt gctgttttgg caggtttgaa aagcagttaa
     6601 ttaggacaca gtttatttat ctaggagctt gaaatggccg ttcaacaaaa caaaaaatcc
     6661 ccttccaaac gcggtatgca ccgttcgcac gacgcgctga ccgcgcctgc actgtctgtc
     6721 gacagcacaa ccggcgaagt acaccgcccg caccacatct cccccaacgg tatgtaccgc
     6781 ggccgcaaag tggtcaaagc caaaggcgaa taatccctat tcgactgact gaaaaagcca
     6841 gaacattgcc atgcaattac tggctttttt tgcattggac gcaccatccg tccaaacttt
     6901 cgccatacgt caacacacag gggcaaagcg ttccgtataa taccccgtga aaatattcca
     6961 aaagccccaa ccaccaagga aattccgatg aaacagaaaa tctggtacac ctacgatgac
     7021 atccaccgcg tcatcaaagc attggcagaa aaaatccgga acgccgacat caaatacgat
     7081 gccatgattg ccatcggcgg cggcggcttt attccggcac gtatgctgcg ctgttttctg
     7141 gaaattccga tttatgccgt aaccaccgcc tattacgaca gcgacaacga aggacaggtt
     7201 accgaagaag tcaaaaaagt ccaatggcta gaccccgttc cagaagccct gcggggcaaa
     7261 aacgtactcg tcgtcgatga agtggacgac agccgcgtaa ccatggaatt ttgcctgaca
     7321 gagctgctca aagaagactt cggtacgatc ggcgtcgccg tactgcacga aaaaatcaaa
     7381 gccaaagcag gcaaaatccc cgaaggcatt ccctatttca gcggcatcac cgtagaagac
     7441 tggtggatca actatccgtg ggacgcactc gacatcgacg aacacaaccg ccttgccgag
     7501 gccggccgag gctgaccctt tcagacggca tattttccga accgatgccg tctgaagccc
     7561 gcacgacccc tgccgcagac cgaaaaccta ccggagaacc ctatgattac acttgccgta
     7621 gatgccatgg gcggcgacca aggacttgcc gttaccgtac ccggcgcaac cgcattcctc
     7681 caagcacacc ccgatgtccg cctgattatg accggcgacg aaacgcaact gcgccaagcc
     7741 ctgaccgcgg caggcgcacc gaaggaacgc atcgacatct gccataccac ccaagttgtc
     7801 ggcatggatg aatcccctca gtccgcccta aagaacaaaa aagactcctc catgcgcgtc
     7861 gccatcaacc aagttaaaga aggcaaagcc caagccgccg tatccgcagg caacacaggc
     7921 gcgctcatgg caaccgcacg tttcgtcctc aagaccatac ccggcatcga acgccccgcc
     7981 atcgccaaat tcctcccgtc cgacaccgac catgttaccc ttgcactcga cctcggcgcg
     8041 aacgtcgact gcacgcccga acagctcgcc caatttgccg ttatcggcag cgaactcgtc
     8101 cacgcactcc atcctcaaaa aggacagccg cgcgtcgggc tggtcaacgt gggcacggaa
     8161 gacatcaaag gtacggacac cgtcaaacaa acctacaaac tgctgcaaaa cagcaaactc
     8221 aactttatcg gcaacatcga aagcaacggc atcctgtacg gcgaagcaga tgtcgtcgtc
     8281 gccgacggct ttgtcggcaa cgtcatgctc aaaaccatcg aaggcgcggt caaattcatg
     8341 agcggagcca tccgccgcga attccaaagc aacctgttca acaaacttgc cgccgttgcc
     8401 gccctgcccg ccctcaaagg gctgaaaaac aaactcgatc cgcgcaaatt caacggggcc
     8461 atcctgctcg ggctgcgcgg catcgtgatt aaaagccacg gcggcacaga cgaaaccggt
     8521 ttccgctatg ccctcgaaga agcctaccat gaagccaagt ctgccagcct ttccaaaatc
     8581 gaacaaggcg tagccgaaca gctcgccgca ctcgaagctg ccaaagccgt ccaaaacgaa
     8641 atcgccgccg acttgtaaca cgcgcgatgc cgtccgaacg cccccgcccc tttcagacgg
     8701 ggcatccgcc cgcaccaaac ctgcgggcgc ggacggcgat gcgcctgtcc ggcacttccc
     8761 aaatacttcc ctgtaaaata aggagtattt gaaaaatgaa gacattagaa aaacggatga
     8821 aagctctaga caaacggatg atgaagttag gaaaatccct tgaaggcagg cttgatgccc
     8881 gtctgattga atccgcattg gattatattc attattcgga acgttttttg gcttttgaaa
     8941 tcctgtgtac ttatattgaa gatttcgata tccggctgac ggaacaagaa tcccaagaaa
     9001 tttcttttat tgacaaggaa tttaggacag aaagtacgtt agattatcca ataaaatcaa
     9061 cgggatgata aacatgaaaa catcaacggt tgtttttggc ggatttttta ttacagataa
     9121 tggagaacga atccaaatcc ccgttttgga aaatcctggc attaaagaaa tcaatcactt
     9181 tttttccata tcaaattttg agaaaaaagc cggcgtcctt gttttcagaa tcatccccga
     9241 gccggaattt ggcaataccg aattaactat ctattttgaa aaaggatatt atttgccaat
     9301 gattcaaaca attttagaag gcggggatat tgaagtcaaa caccttaaaa cggaaaatta
     9361 tagtggaaat acaatggaaa tttggggaga ttcctaccct attgagcata tctctaaaaa
     9421 tatttctaca attcaaaata taatttctga atttatgata caaaaacaaa caccggcacc
     9481 aataatttga tggaaaccca acaatcaaaa tgccgtctga agcatgtttg gttttcagac
     9541 ggcatttcct tcgcttaaaa cagcgtatcg gcaaccccgc cctgcccgtc cacggcaatc
     9601 tgcatctgaa aaccatctgt atcccaaacc acacccccat ccctgtttcc gtcatttgca
     9661 ccctgcccgt attgggcaat catcggtttt tcgcttacaa tagccgaatc tgaaccaact
     9721 ctctaaaaag gccgttccca tgcagtatgc aaaaatttcc ggcacgggca gctatcttcc
     9781 cgccaaccgc gtcagcaatg acgaccttgc ccaaaaggta gatacctctg acgagtggat
     9841 taccgcgcgc acgggcatca agttccgcca tattgcagcc gaaaatgaga aaaccagcga
     9901 tcttgccgcc gaagcagccc gccgcgcgct ggatgcagcc ggattagaca gcggcgaaat
     9961 cgatttgatt atcgtggcga cggcaacgcc ggatatgcag tttccttcta ccgccaccat
    10021 cgtgcagcaa aaattgggca tcaccaacgg ctgtcccgcg tttgacgtac aggcagtgtg
    10081 cgcaggcttt atgtacgcgc tgaccacggc aaacgcctac atcaaaagcg gcatggcaaa
    10141 aaacgcgctg gtcatcggcg cggaaacctt cagtcgcatt gtagactgga acgaccgcac
    10201 aacctgcgta ttgttcggcg acggcgcggg cgcggtggtt ttgagcgcgg cggacaaacc
    10261 gggcatcatc cacagcaaac tcaaagccga cggcaattat ctgaaactct taaacgtccc
    10321 cgggcaaatc gcctgcggca aagtttccgg ttcgccgtac atttcgatgg acggtcccgg
    10381 cgtgttcaag tttgccgtca aaatgctgtc caaaatcgcc gatgacgtta tcgaagaagc
    10441 cggttacacc gccgctcaaa tcgactggat cgtgccgcat caggcaaacc gccgcattat
    10501 cgaatcgacc gcgaaacatt tggggctgag tatggacaaa gtcgtcctga ccgtccaaga
    10561 ccacggcaac acgtccgccg cctcgattcc gctggctttg gatacaggca tccgcagcgg
    10621 acaaatcaaa cgcggtcaaa acctgctgct cgaaggcatc ggcggtggtt tcgcgtgggg
    10681 cgcggtgctg ttgcaatatt gaacccgatg ccgtctgaag caggttttca gacggcattt
    10741 cccatatcat gaagcggcag gctttcttca aaccaattgc gtgtgcggca tttctgtctg
    10801 ccgtttcgct gcgcctcccc gtattgggcg cgtgttacgc aatattgtcc ctctatgcgt
    10861 ttgcacttta cggcatcgac aaacggcgtg ccgtgcgggg aaaacgccgc attcccgaac
    10921 accgcctgct gctgcctgcc ttgttcggcg gttgggcggg cgcatacttg ggcagcagga
    10981 tattcaggca taaaacggcg aaaaagcgtt ttgttgtgct gttccgtctg actgtttcag
    11041 gtaatgtcct ggcgaccctc atcctg
//
LOCUS       DAWKJW010000048        10898 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.048, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000048 DAWKJW010000000
VERSION     DAWKJW010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10898)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10898)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10898
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.048"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            143..1540
                     /gene="aspA"
                     /locus_tag="WJJ54_000938"
     CDS             143..1540
                     /gene="aspA"
                     /locus_tag="WJJ54_000938"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HEZ7341821.1"
                     /translation="MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQ
                     FVRSMVMVKKATAQANGKLGAVKPEIAAAIEKACDEVLLNNRCLDQFPSDVYQGGAGT
                     SVNMNTNEVIANLVLEALGYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGE
                     LLDKLAVLKNAFAAKAEEFKDVLKMGRTQLQDAVPMTTGQEFQSFQVLLEEEILNLDR
                     TRQLLLEVNLGATAIGTGVNTPKGYAELVVKKLSEVSGLPCKLTENLIEATSDYGAYV
                     MVHGALKRTAVKLSKICNDLRLLSSGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVV
                     NQVCFKVIGNDTTITFAAEAGQLQLNVMEPVIAQCMFETISLLGNAAVNLSDKCVKGI
                     TVNREICERYVFNSIGLVTYLNPYIGHHNGDLVGKICAQTGKGVREVVLERGLLSEEE
                     LNRILSPENLMNPHL"
     gene            complement(1612..2487)
                     /locus_tag="WJJ54_000939"
     CDS             complement(1612..2487)
                     /locus_tag="WJJ54_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ7341822.1"
                     /translation="MAYLLISIVFSVSVSILLKMARKKKIDIAQAVAVNYVVAVILTL
                     LVLKPDVGNIGAFLPTWWLFAALGVLLPSVFVIMGKSVESAGIVKSDAAQRLSLFLPI
                     VAALTLFGEKLSEGRLIGLCLAFAALFCLLWKHGGGKKSGSAWRQAALLLGVWAGYGI
                     IDILFKQLAKSGTAFSGNLLVAFVLAGVLMFACLFAKSVRWRVESVVGGILLGGLNFM
                     NIVTYITAHQMMKDNPTLVFAGMNIGVIVLGTLSGALFFKEKINTINTAGIVLALCSI
                     ACLFYWAEVKALFGI"
     gene            complement(2489..3073)
                     /locus_tag="WJJ54_000940"
     CDS             complement(2489..3073)
                     /locus_tag="WJJ54_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEZ7341823.1"
                     /translation="MDKDLYAVLGVSPQAGADEIKRAYRNEERGRQEEAFRREQARRE
                     QFYREQMRREQAFRQAFERQASRSRHAYEPSGGGSGRNYVLAAYILFGLGAIMLFMPI
                     VGVIFAYMPIVGVILAYMKRNSLDSIVYAAHTEYLIKTFWRTFWLYILGALTALLGIG
                     VLIIIATNVWYFYRIIAGFIRFNGGRAVAPEKWI"
     gene            complement(3096..3575)
                     /gene="ybaK"
                     /locus_tag="WJJ54_000941"
     CDS             complement(3096..3575)
                     /gene="ybaK"
                     /locus_tag="WJJ54_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HEZ7341824.1"
                     /translation="MSKHTYPITPAVRVLRENGIEFEPFTYAYEEHGGTAQFARLFGK
                     DEHLVIKTIVLQDENGKGLIVLMHGDKQISTRNLARHLGAKHIESATPVQANKWTGYL
                     VGGTTPFGIRTKLDIYVEQSVMDLETIYINGGKRGFIIGIRPGDLNILNPKTIQAAV"
     gene            3650..4012
                     /locus_tag="WJJ54_000942"
     CDS             3650..4012
                     /locus_tag="WJJ54_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEZ7341825.1"
                     /translation="MDIRYFGTTPRYSEAVGANGLIFLSGMVPENGETAAEQTADVLA
                     QIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARP
                     EWRVEIKITAVKKDAATA"
     gene            4047..4910
                     /locus_tag="WJJ54_000943"
     CDS             4047..4910
                     /locus_tag="WJJ54_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HEZ7341826.1"
                     /translation="MKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYN
                     TPKGRVIANMIVVNRGGDLLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVDAEL
                     EASAEPLAAQEPSLVFTAECVSDGICTVVLPHRGILHIAPKNALPPYDAAAENAWRLH
                     EIRSGYPWICAATKETAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQLKRGLAV
                     LSGNSAAEAGILLAADGEEAGIVLDSVQDSENFTALAVIKFSAAQKTLSAPNGGSFKA
                     VHLFFKTENAE"
     gene            5003..5962
                     /gene="ttcA"
                     /locus_tag="WJJ54_000944"
     CDS             5003..5962
                     /gene="ttcA"
                     /locus_tag="WJJ54_000944"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HEZ7341827.1"
                     /translation="MSKKTKQELENNKLSKRLRHAVGDAINDFNMIEPDDKIMVCLSG
                     GKDSYALLDILRQLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEED
                     TYSTVKRVLDEGKTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATMFLNMFY
                     GGKLKAMPPKLVSDNGEHIVIRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQ
                     VIGDMLRDWDKRFPGRIESMFSALQNVVPSHLADTELFDFAGLERGQTLKHGGDLAFD
                     SEKMPERFSDGSEEDESEIKIAPQKAERKVINILANKPKTCGA"
     gene            complement(6056..8995)
                     /locus_tag="WJJ54_000945"
     CDS             complement(6056..8995)
                     /locus_tag="WJJ54_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III restriction-modification system
                     endonuclease"
                     /protein_id="HEZ7341828.1"
                     /translation="MSGFNYEKNQPHQMRAVSAVLGVFDGATPKYRTADENPELLFAA
                     KQYANNILKVQSQNGIDGRFPDRSDDQNILDISMETGTGKTYTYTQTMFELHRWLGVF
                     KFIVVVPTLSIKAGTQQFLQSKALAEHFEQDFGGDYEGVRLKTYVVESAKKNKGKKSN
                     APITIEQFVKAENKKEIHVLLINAGMVNSSSMNDTGDKALKDLFDNPVDALAAVRPFV
                     IVDEPHKFPTRESAKTWGNIKRLKPQYILRYGATFNDEYYNLLYRLTAVDAFNDGLVK
                     GVRVFQEEMQGGMDAAVKLVSSGGKEAKFELNEKDKKQTFKLAKGEDLAQIHPAISDL
                     KIDKMNKTVVVLSNGLELKTGAVINPYSYSQTVQDAMMQRAVAEHFKLERALLAERAP
                     QPKIKPLTLFFIDDIAGYRSGNELSGSLKDKFESWIRAEAARRLKTESDPFYRDYLQK
                     TLDDVSACHGGYFSKDNTDSDDRIEQEINEILHDKEKLLSLDNPRRFIFSKWTLREGW
                     DNPNVFQICKLRSSGSTTSKLQEVGRGLRLPVNELMARVRDVPYKLNYFVDSSEKDFV
                     KQLVGEINDNSFQEEISKKFTEELKQKILQKYPDIKPLVLVNQLFSDGIIDDNENFAE
                     DGYDKLKAAYPEAFPKGLDKGKVSNAKDEGKDTIIMREGKYEELKALWELIHHKAVLQ
                     YKIKDEAEFVDLFTAYLRENAAKFPQAGIRTAVNEAYINNGLMLSRRIDSFEDEDFIR
                     FNTMTYRELLEKLAQTAKIRMQTLHQAFYRVRDELNIGDFLNMQTIAQIKNGFNRFLL
                     HHSFHKFELDYRLVGSKIHPTKFTDKDGKPRAVKKADLGRFEDTEHRPAAGYLFDEIF
                     YDSDIEHENVANNQIEGVTVFTKIPRNSIKIPVAGGGTYSPDFAYIVKTKSGEILNFV
                     IEAKGTDGAEDLRKSEERKIKHAEKLFAEISKEIKVVFKTQFDGERIAELIGQNMPAG
                     GHSENGH"
     gene            complement(9008..10699)
                     /locus_tag="WJJ54_000946"
     CDS             complement(9008..10699)
                     /locus_tag="WJJ54_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ7341829.1"
                     /translation="MNWLGKSYARLLRNLPPETLISEDKTHNAKPENAGSQNLLIRGD
                     NLEVLKHLKNAYTNSVKMIYIDPPYNTGSDGFVYQDDRKFTPAELARLANIDEDEAAR
                     ILDFTDKGSNSHSAWLTFMYPRLYVARELLKDDGVIFISIDDNEAAQLKLLCDEVFGE
                     GNFIKDLIVNTSEGGGNAKYVVNGHETVLVYAKDITHFDNLKRPKDIRGKKIVINDEL
                     YWIQEDAVREQFGKYGNLHYEDIIEIKGIEFKNKIDKDIENNEYILIPKSYGKTIIGK
                     LRKVSDDFSKFHSILNIGNISKNLTKDGIRELEELFETGKGYSPFETPKPLDLLKRLV
                     LSATFKGNQTDLILDFFAGSGTTAHAVMQLNAEGQNGNRRYICVQLPEKTAEKSEARK
                     AGYPTIFDITKARIEKAAAKIRVEHPDYTGDSGFKIFQTADNFRQHPDKDFSPEQPDL
                     PLNDELSEEQLQTLLTTWTLYDGAALTTPVEPVRLGAYTAYLCEKRLYLMNAGFTSAD
                     LLAFIRKLDDDAAFNPNRVIVFGSNMASAMQHELDQAVRGYANKKEIELNVVIRV"
BASE COUNT         2622 a         2924 c         2587 g         2765 t
ORIGIN      
        1 acccgaaaac aacgtttccc gttttcagac ggcatacgat atggacaatt tcatccggcc
       61 ggtatagtgt tcatcctgcg gcggcatctt tccgatggcg cattttttca atattaatta
      121 tccgacttac aaaggtaaaa acatgactgt ccgtatcgaa cacgatttat tgggcgaccg
      181 cgagattccc gccgaagtgt attggggcat ccacactctg cgcgccattg aaaactttaa
      241 aatctccaca caaaaaattt ctgacgtgcc gcagtttgtc cgcagtatgg tgatggtgaa
      301 aaaggcgacg gcacaggcaa acggtaagtt gggcgcggtc aagcccgaaa tcgccgccgc
      361 cattgaaaag gcttgcgacg aagttctgct gaacaaccgc tgcctcgacc aattcccctc
      421 cgacgtgtat cagggcggtg cgggaacttc ggtcaatatg aacaccaacg aagtcatcgc
      481 caacctcgta ttggaagcct tgggctatga gaaaggccgc tacgatatcg tcaatccgat
      541 ggatcatgtc aacgccagcc aatccaccaa cgatgcctac cctaccggct tccgccttgc
      601 cgtgtattac agcatcggcg aattgctcga caaactggcc gtcctgaaaa acgcctttgc
      661 cgccaaagcc gaagagttta aagacgtttt gaaaatgggc cgcacccagc ttcaagatgc
      721 cgtgccaatg actacaggac aagaattcca atctttccaa gtgttgttgg aagaagaaat
      781 cctcaacctc gaccgcacgc gccaactgct gttggaagtc aatttgggcg caacggcaat
      841 cggcacgggc gtgaacacgc ccaaaggcta cgccgaactg gtggtcaaaa aactctccga
      901 agtcagcggc ttgccttgca aactgaccga aaacctgatt gaggcgacct ccgactacgg
      961 cgcatatgtg atggtacacg gcgcattgaa gcgcacggcg gtcaaactct ccaaaatctg
     1021 caacgacttg cgcctgctct cttccggccc gcgtgccggc ttgaaagaaa tcaacctgcc
     1081 cgaattacag gccggttctt ccattatgcc tgccaaagtc aatcccgtga ttcccgaagt
     1141 ggtcaaccaa gtctgcttca aagtcatcgg caacgacacg acgattacct tcgccgccga
     1201 agccgggcaa ctgcaattaa acgtgatgga gccggtcatc gcccaatgta tgtttgaaac
     1261 catttccctc ttgggcaatg ccgcagtcaa cctgtccgac aaatgcgtca aaggcattac
     1321 ggtcaaccgc gaaatctgcg aacgttacgt tttcaactcc atcggtttgg tgacttatct
     1381 gaatccgtat atcggacacc acaacggcga tttggtcggc aaaatctgcg cccaaaccgg
     1441 caaaggcgtg cgcgaggttg tcttggaacg cgggctgttg agcgaagaag aactcaaccg
     1501 catcctctct cccgagaacc tgatgaaccc ccatctgtaa cgttgcagac aaatgccgtc
     1561 tgaagcaggg atactgcttc agacggcatt ttgttatatc aatcagccgg attatatgcc
     1621 gaacagtgcc ttgacctccg cccaataaaa caggcaggcg atggaacaca gtgccaacac
     1681 gattcccgcc gtattgattg tgttgatttt ttccttaaaa aacagtgcgc ccgaaagcgt
     1741 ccccaaaaca atcacgccga tattcatacc ggcaaaaacc agcgtgggat tgtccttcat
     1801 catttggtgc gcggtgatgt aggttacgat gttcatgaag ttcaaaccgc ccaagagtat
     1861 gccgccgacc acactctcaa cgcgccatct gaccgatttg gcaaacaggc aggcaaacat
     1921 cagcacacct gccagcacaa atgcaaccag caggttgcct gaaaatgccg tgccgctttt
     1981 ggcaagctgt ttgaacagga tgtcgataat gccgtaaccc gcccacacgc ccagcagcaa
     2041 tgccgcctgc cgccacgcgc tgcctgattt tttgccgccg ccgtgtttcc aaagcaggca
     2101 gaacagcgcg gcaaatgcga ggcacagccc gattagtctg ccttcgctga gtttttcgcc
     2161 aaacagcgtc aaggcggcaa caatcggcaa aaacagcgac aaacgctgcg ccgcgtcgga
     2221 tttgacgata ccggcggatt ctacggattt gcccataatg acaaatacgg acggcagcag
     2281 cacgcccaat gcggcaaaca gccaccatgt cggcaaaaat gcgccgatat tgccgacatc
     2341 cggcttcaat accagcaggg tcagtatgac cgcgaccaca taattgacgg cgaccgcctg
     2401 cgcgatgtcg atttttttct tccttgccat tttcagcaaa atggaaaccg acacgctgaa
     2461 cacgatgctg attaacaggt aagccatact atatccattt ctcgggtgca accgccctgc
     2521 cgccgttgaa gcggataaag ccggcgatga tgcggtagaa ataccagacg ttcgttgcaa
     2581 taataatcag cacgccgata cccaaaaggg cagtcagcgc acccaaaata taaagccaaa
     2641 atgtgcgcca aaaggtttta atcaggtatt cggtatgtgc ggcatagaca atgctgtcca
     2701 aactgttccg tttcatatag gcgagaatca cgccgactat gggcatatag gcgaaaatca
     2761 cgccgactat gggcatgaac agcatgattg cacccaaacc gaacaggatg taggcggcga
     2821 ggacatagtt gcgcccgctt ccgccgccgg acggttcgta agcatggcgc gaacgtgagg
     2881 cctgccgttc aaacgcctgt ctgaacgcct gttcgcggcg catctgttcg cggtaaaact
     2941 gctccctgcg cgcctgttcg cggcggaatg cctcttcctg ccgcccgcgt tcctcattgc
     3001 ggtaggcgcg tttgatttcg tccgctcccg cctgcggcga cacgcccaat acggcataca
     3061 aatctttgtc catattgttc ctttatactt tcccgtcaaa ccgccgcctg tattgttttc
     3121 gggttcaaaa tatttaaatc tccgggacgg atgccgataa tgaacccgcg ttttccgccg
     3181 ttgatataga tggtttccaa atccatcacc gactgttcga cgtaaatatc caactttgtc
     3241 cggatgccga acggcgttgt gccgccgacc agatagcccg tccacttgtt tgcctgtacg
     3301 ggcgtggcgg attcgatgtg tttcgcaccc aaatgccgcg ctagattgcg ggttgaaatc
     3361 tgcttgtcgc cgtgcatcaa gacaatcagc cccttaccgt tttcatcttg caaaacaatg
     3421 gttttaatga ccaagtgttc gtctttgccg aatagtcggg caaactgcgc cgtgccgccg
     3481 tgttcctcat aggcataggt aaaaggttca aattcgatgc cgttttcacg caaaacgcgc
     3541 acggcaggtg ttatcggata agtgtgttta ctcatttttc gtcatgcaaa acatggaaat
     3601 cggtcaagcg caatgttacc atatatcccc tttatcgaag gaaaccgata tggatatccg
     3661 atatttcggc acaacgcccc gctattccga agccgtcggc gcaaacggct tgattttcct
     3721 ctccggcatg gttcccgaaa acggtgaaac ggctgccgaa cagactgccg acgtgcttgc
     3781 ccaaatcgac cgctggctgg cggaatgcgg ctcggacaaa gcgcacgttt tggatgcggt
     3841 catctatctg cgcgatatgg gcgactatgc ggaaatgaac ggcgtgtggg acgcttgggt
     3901 tgccgccggc agaacgcccg cccgcgcctg cgtggaagcg cggctcgccc gtccggagtg
     3961 gcgcgtcgaa atcaaaataa ccgccgtgaa gaaagatgcg gcaaccgcat aaacagattt
     4021 cctttatatt tcagagtacg caaatgatga aaaccttact gccctttttc ggcgtggtac
     4081 gcgtcagcgg cgaagaccgc caaaccttcc tgcacggaca gctttccaac gacatcaata
     4141 atcttcagac cgggcaggcg tgttatgcga cttacaacac gcccaaaggc cgtgtcatcg
     4201 ccaatatgat tgtcgtcaac cgaggcggcg atttgctgct gattatggcg caagacttgc
     4261 ttgaagcaac ggtcaaacgt ttgcggatgt ttgtgttgcg tgccaaagcc gtttttgaaa
     4321 tccttgaaga ttacgccgtc gacgcggaat tggaagcatc cgccgaaccg cttgccgcgc
     4381 aagaacccag tctcgtcttt accgccgaat gcgtttcaga cggcatctgc accgtcgtcc
     4441 tgccccatcg gggcattttg cacatcgccc ccaaaaacgc cttgccgcct tatgatgccg
     4501 ccgccgaaaa cgcgtggcgg ctgcacgaaa tccgcagcgg ttacccgtgg atatgcgcgg
     4561 ctaccaaaga aaccgccgtc gcccaaatgc tcaaccagca catcatcggc ggcgtacact
     4621 tcaaaaaagg ctgctatccg ggacaggaaa tcattgcccg tgcccagtat cgggggcagc
     4681 tcaaacgcgg cttggcggta ttgtcgggaa attcggcagc cgaagcaggc atcctgctgg
     4741 cggcagacgg cgaagaggcc ggcatcgtac tcgacagcgt tcaagattcg gaaaacttta
     4801 ccgcccttgc cgtgattaaa ttctccgccg cacaaaaaac actgtccgcc ccaaacggcg
     4861 gcagcttcaa agcggttcat ctcttcttta aaaccgaaaa tgcagaataa gccgccgatg
     4921 ccgtctgaag cccttcagac ggcattgccg ccccgtcaat cggttacaat gccgcctttc
     4981 taattttcaa acccaaaccg ccatgtccaa aaaaaccaaa caagaactcg aaaacaacaa
     5041 actcagcaaa cgcctgcgcc acgccgtcgg cgacgcgatt aacgatttca atatgatcga
     5101 gccggacgac aaaatcatgg tctgcctctc cggcggcaaa gacagctatg ccctgttaga
     5161 catcctgcgc cagctccaag ccagcgcgcc gattgatttt gaactggtcg ccgtcaatct
     5221 cgaccaaaag cagccgggtt tccccgaaga agtattgccg acctatctcg aaagcatagg
     5281 cgtgccgtac aaaatcgtcg aagaagacac ctactccacc gtcaaacgcg tattagacga
     5341 aggcaaaacg acttgttcgc tgtgcagccg cctgcgccgc ggcatcctct accgcaccgc
     5401 aaaagaattg ggctgcacca aaatcgcctt aggacaccac cgtgacgaca tccttgccac
     5461 catgttttta aatatgtttt acggtggaaa actcaaagcc atgccgccca agctggtgag
     5521 cgacaacggc gaacacatcg tcatccgtcc gctggcgtat gtaaaagaaa aagacttaat
     5581 caaatacgcc gaattaaaac aattccccat catcccgtgc aacctctgcg gctcgcaacc
     5641 caacctgcaa cgccaagtca tcggcgatat gctgcgcgat tgggacaaac gctttcccgg
     5701 ccgcatcgaa tcgatgttct ccgccctgca aaacgtcgtc ccttcccacc ttgccgatac
     5761 cgaactcttc gactttgccg gattggaacg cggtcaaacc ctgaaacacg gcggcgattt
     5821 ggcgtttgac agcgaaaaaa tgcccgaacg tttttcagac ggcagcgaag aagacgaaag
     5881 cgaaatcaaa atcgcgccgc aaaaagccga acgcaaagtc atcaacattc tggcgaacaa
     5941 gccgaaaacc tgcggcgcgt aaccccccgc cgtcaaaaat gccgtctgaa gcccgtttgg
     6001 cgtttcagac ggcattttaa aatcccgaag cagacggctt ccaaacattt gtttctcagt
     6061 gtccgttttc agaatgcccg cctgcgggca tattttgccc gatcagttcg gctatcctct
     6121 cgccgtcaaa ctgcgttttg aacaccacct tgatttcttt ggaaatctcg gcaaacagct
     6181 tttcggcatg tttgattttc cgctcttcgc tttttcgcaa atcttccgcc ccgtcagtcc
     6241 ctttggcttc aatcacaaag ttcagaatct cgccgctttt ggttttcacg atataggcaa
     6301 aatcgggcga atacgtgccg ccgccggcaa cggggatttt gatggagttt ctcggtattt
     6361 tggtgaatac ggttacgcct tcaatttggt tgttggcgac attttcatgt tctatatccg
     6421 aatcgtagaa aatttcgtcg aagagatagc cggcggcagg ccggtgctcc gtatcttcaa
     6481 atctgcccaa atctgctttt ttcaccgcgc gcggtttgcc gtctttatcg gtaaatttgg
     6541 tcggatggat tttgctgccg acaagccggt aatccagttc aaatttatgg aaggaatgat
     6601 gaagcaaaaa ccggttgaag ccgtttttga tttgggcgat ggtctgcata ttcaaaaaat
     6661 cgccaatgtt cagttcgtcg cggacgcgat aaaacgcctg atgcaaagtc tgcatgcgga
     6721 tttttgccgt ttgtgccagt ttttccagaa gctcacggta agtcattgtg ttaaaacgga
     6781 taaaatcttc atcttcaaaa ctgtctatgc ggcgggaaag cataagcccg ttgttgatat
     6841 aagcttcgtt taccgccgtg cgtatgcctg cctgcgggaa tttggcggcg ttttcacgca
     6901 aataggcggt aaataaatcg acaaattcgg cttcatcctt gattttgtac tgcaaaacgg
     6961 ctttatggtg aatcagctcc cacaaggctt tgagttcttc atatttgcct tcgcgcatga
     7021 tgatggtgtc tttgccctcg tctttggcgt tgctgacttt gcctttgtcc aaacctttgg
     7081 ggaaggcttc gggataggcg gcttttaatt tgtcatagcc gtcttcggca aagttttcat
     7141 tgtcgtcaat gatgccgtct gaaaacagtt ggtttaccaa taccagcggt ttgatatcgg
     7201 ggtatttttg caatattttt tgtttcagct cttcggtaaa ctttttggag atttcttcct
     7261 gaaaagaatt gtcgttgatt tcgccgacaa gctgcttcac aaagtctttt tcgctgctat
     7321 cgacaaaata attcagtttg tacggtacat cgcgcacccg cgccatcagc tcgtttaccg
     7381 gcaggcgcag gccgcgtccg acttcttgca gcttggaagt cgtgctgccg ctggaacgca
     7441 gtttgcaaat ctggaaaacg ttgggattgt cccagccttc gcgcagcgtc catttggaaa
     7501 aaataaagcg gcgcgggttg tccaaagaca gcagtttttc cttatcgtgc aggatttcat
     7561 tgatttcctg ctcgattcta tcgtcgctgt ctgtattgtc tttggaaaaa tagccgccgt
     7621 ggcaggcgga tacatcgtcc aacgtctttt gcaggtaatc gcggtaaaac gggtcgcttt
     7681 ccgttttcag acggcgtgcc gcttccgcgc gaatccagct ttcaaattta tctttcaggc
     7741 tgcctgaaag ctcgttgccg ctgcggtagc ccgcgatatc gtcaataaaa aacagcgtca
     7801 gcggcttgat tttgggctgt ggcgcgcgtt ctgccaaaag cgcgcgttcc agcttgaaat
     7861 gttcggcaac cgcccgctgc atcatcgcat cctgcaccgt ttgcgaatag gaataagggt
     7921 tgatgacggc acccgttttc aactccaagc cgttgcttaa caccaccacg gttttattca
     7981 ttttgtcgat tttcaaatcc gaaatagccg gatggatttg cgccaaatct tcgccttttg
     8041 ccagtttgaa cgtctgcttt ttgtcctttt cgtttaattc aaatttcgct tctttgccgc
     8101 ccgacgacac cagttttacc gccgcatcca tgccgccctg catttcttcc tgaaacacgc
     8161 gcacgccttt gaccagcccg tcgttaaacg cgtctactgc cgtcaaacgg taaagcaagt
     8221 tgtaatattc atcgttaaat gtcgcaccgt agcgcaaaat atattgcggt tttaagcgtt
     8281 tgatattgcc ccacgttttc gcgctctccc gggtcgggaa tttatgcggt tcgtccacaa
     8341 tcacaaacgg gcgcacggcg gccaatgcat caacgggatt gtcaaacaaa tctttcaatg
     8401 ccttgtcgcc cgtatcgttc atggacgacg aattaaccat gcccgcgtta atcagcagca
     8461 catggatttc ctttttgttt tccgctttga caaattgctc aatcgttatg ggcgcattgg
     8521 actttttgcc cttattcttt ttcgcgcttt ccaccacata ggttttcagg cgcacgcctt
     8581 cataatcgcc gccgaaatcc tgttcaaaat gctctgccaa agccttgctt tgcaaaaact
     8641 gctgtgttcc cgccttaatg gacaaagtcg gcacgaccac gataaatttg aacacgccca
     8701 gccaacggtg cagctcgaac atggtttgtg tgtaggtata ggttttgccc gtgcccgttt
     8761 ccatggaaat atcaaggata ttttggtcgt ccgaacggtc ggggaatcgg ccgtctatac
     8821 cgttttggct ttgcactttc aggatattgt ttgcgtattg ttttgcagca aacaaaagtt
     8881 cgggattttc gtctgccgtc cgatatttgg gcgttgcccc gtcaaacacg cccaaaaccg
     8941 ccgaaaccgc ccgcatttgg tgcggctggt ttttctcgta attaaaaccg ctcatgaatt
     9001 gcctccgtca aaccctgata accacattca actcaatctc ttttttattg gcataaccgc
     9061 gaaccgcctg gtcaagttcg tgctgcatgg cgcttgccat attgctgccg aatacaatca
     9121 cgcggttggg attgaaagcc gcatcgtcgt ccagcttgcg gataaacgcc aacaaatcgg
     9181 cagaagtaaa accggcattc atcagataca gccgtttttc gcacagatac gccgtgtaag
     9241 cccctaaccg cacaggctca accggcgtgg tcagtgccgc cccgtcatac agcgtccagg
     9301 tggtcagaag cgtttgcagc tgttcttcgc ttaattcatc gttaagcggc aaatccggtt
     9361 gttcgggcga aaaatccttg tccggatgct gcctgaaatt gtctgccgtt tgaaagattt
     9421 tgaagcccga atcgcccgtg taatcgggat gttcgacgcg gattttggcg gcggcttttt
     9481 ctatgcgggc tttggtgatg tcgaagatgg tcgggtagcc tgctttacgg gcttcggatt
     9541 tttcagcggt tttttcggga agctgtacac agatatagcg gcggttaccg ttttgtcctt
     9601 cggcgttaag ctgcatcacg gcgtgggcgg ttgtgccgct gcctgcgaag aagtctagga
     9661 ttaggtcagt ttgatttccc ttgaaagttg cagaaagaac taatcttttc aataaatcta
     9721 atggttttgg tgtttcaaaa ggagaataac cttttccagt ttcaaacaac tcttctaatt
     9781 cacgaatacc atctttagta agatttttac ttatatttcc aatatttaag atgctatgaa
     9841 atttggaaaa atcatcggat acttttctaa gttttccaat aattgttttc ccataagact
     9901 tcggaattaa gatatattca ttattttcaa tatctttatc aattttgttt ttaaactcaa
     9961 ttccttttat ttcaataata tcttcgtaat gcaagttccc atatttgcca aactgttcgc
    10021 gaacggcatc ttcctgtatc caatataatt catcattgat tacaattttt ttgccgcgta
    10081 tatcttttgg tctttttaga ttgtcaaaat gagtaatatc tttcgcataa actaaaacag
    10141 tttcatgccc atttacaaca tattttgcat taccaccacc ttctgatgta ttaacaatta
    10201 aatctttaat aaaattccct tccccaaaca cttcatcaca caacaatttc aactgcgccg
    10261 cttcgttatc gtcaatcgag ataaaaatca cgccgtcgtc ctttaacagt tcgcgggcga
    10321 catacaggcg cggatacata aaggtgagcc atgcgctgtg cgagtttgag cctttgtcgg
    10381 tgaaatctaa aatccgcgcg gcttcgtctt cgtcaatatt cgccaggcgg gcaagttcgg
    10441 ctggggtgaa tttgcggtcg tcctgataga caaagccgtc cgagccagtg ttgtagggcg
    10501 ggtcgatgta aatcatcttc acgctgtttg tataggcgtt ttttaagtgt ttcaacactt
    10561 ctagattgtc gccacgaatc agcaggtttt ggctgcctgc attttcgggc ttggcgttgt
    10621 gcgtcttatc ttcacttatc agggtttcgg gcggcaggtt gcgaagcagg cgggcatatg
    10681 atttgcccag ccagttcatt tcgtaaaatt cgcgtccgat gtcggtctgt ggcgcaattt
    10741 cggcttgtaa tctgtcgata aggaaatttc cgtctgcgtc aaaacaggcg ggaaacagtt
    10801 ttttgagctg ttcgagttgg gtagagttgg cggtaatgcc gtctgaagtg tagattgcct
    10861 cggtgttcgc cccggctgtg tcgcttagat cagggctt
//
LOCUS       DAWKJW010000049        10893 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.049, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000049 DAWKJW010000000
VERSION     DAWKJW010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10893)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10893)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10893
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.049"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            120..302
                     /locus_tag="WJJ54_000947"
     CDS             120..302
                     /locus_tag="WJJ54_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341830.1"
                     /translation="MFWYVIGFCSFVVALLSLWVNVGAFGMQEDDTPQSDYEKRLGLG
                     AKLKNKNTPDTEEKQQ"
     gene            complement(364..1365)
                     /locus_tag="WJJ54_000948"
     CDS             complement(364..1365)
                     /locus_tag="WJJ54_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEZ7341831.1"
                     /translation="MIDGQTTEPKQKNRIILAPMQGLVDDVMRDLLTRIGGYDECVSE
                     FVRITHTVHSRSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGAN
                     KIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRGRLPAHIPLTAKMRLGYEDKS
                     RALECACAIAEVGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVNIPVTANGDVFSLQ
                     DYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSKWIRQFFELC
                     LTKEANNKYPIARLKQWLGMMKKTFDPAQTLFDRVRTVKDADEVRRILNAFEHEINV"
     gene            complement(1442..5275)
                     /locus_tag="WJJ54_000949"
     CDS             complement(1442..5275)
                     /locus_tag="WJJ54_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/FMN-binding oxidoreductase"
                     /protein_id="HEZ7341832.1"
                     /translation="MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQ
                     RKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDN
                     RQVDVLVAAAEKAVERFDSSFDETSQKRRQILERLSKITKPHNIMFDGLARVTHVTDA
                     TDWRVEYPFVVVNPDTEAEVAPLVRALIELDLVIIPRGGGTGYTGGAIPLDAMSAVIN
                     TEKLDKHRGVEFVELAGLDGKHPIIHCGAGVVTRRVEETAHQAGLVFAVDPTSADASC
                     VGGNVAMNAGGKKAVLWGTALDNLAYWQMVNPQGEWLRIERVRHNFGKIHDEETAVFD
                     VHTLDSDGLNIVKTERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITSVAF
                     VLHKMPKHTRTVCMEFFGTVATATPSIVEIRDFLLAHDSVRLAGLEHLDWRYVRAVGY
                     ATKAAGKGRPKMVLLADVVSDDEAAVEAAAEHICELARARDGEGFIAISPEARKTFWL
                     DRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL
                     SGKLPIDKMGTDLPTAELLGERGKHALAHVAAVKARWEWLLANLDAPLADYKARYGAA
                     VHAAPEAKDNESCFTAFRDFRLRVSVKADVMKPLSEIFSGKTDTKIIQGLGKIHAKTV
                     RSRVFVALHMHAGDGNVHTNIPVNSDDADMLQTAYRSVERIMKIARSLNGVISGEHGI
                     GITKLEFLSDEEMQPFWNYKNQVDPKHTFNRHKLMKGSDLRNAYTPSFELLGAESLIM
                     EKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQT
                     RRGVSVKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAA
                     SMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKLLPIGTKKQKAEPKASVGKA
                     PIKEQVIHFINRPLPKNVPAKTPRSLLGIEDGKSIPIIRNPASPEDAEAVFYFPGCGS
                     ERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRM
                     ANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVQLNGVQGQQ
                     YLYHDPCHTPIKTMNATQLASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQE
                     EIEKNLKELPQGEPVKMLTSCPACLQGLSRYADDNNMPADYIVIEMAKHILGENWLDE
                     FVKKANNGGVEKVLL"
     gene            5536..5632
                     /gene="ffs"
                     /locus_tag="WJJ54_000950"
     ncRNA           5536..5632
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="WJJ54_000950"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            5800..7491
                     /gene="dld"
                     /locus_tag="WJJ54_000951"
     CDS             5800..7491
                     /gene="dld"
                     /locus_tag="WJJ54_000951"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HEZ7341833.1"
                     /translation="MSASQLLSRLTQTVGEKYIITDPTKTEQYRQGYRFGEGKALAVV
                     RPGSILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQ
                     TINNNEQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQR
                     GPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQNKDIKQDAGKGH
                     DHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIG
                     TNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKL
                     FDLKARVDRFGKKASFLPKHFSDKAMQFVSKYLPDHLPKSMRDYRDKYEHHLILKMGG
                     KGVDEARAFLKEYFAHHSGAFFECNAEETQAAMLHRFAVASAAIRYRAVHDDEVEDLV
                     ALDIALRRDDRDWFEKLPSEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNDCMALEHEM
                     LHLLDQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGVGKTSKKKNWAE"
     gene            7623..7730
                     /locus_tag="WJJ54_000952"
                     /pseudo
     CDS             7623..7730
                     /locus_tag="WJJ54_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            7786..8157
                     /locus_tag="WJJ54_000953"
     CDS             7786..8157
                     /locus_tag="WJJ54_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HEZ7341834.1"
                     /translation="MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLG
                     LTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELP
                     ETVEAANPQAALAQYFGRGGR"
     gene            8312..8860
                     /locus_tag="WJJ54_000954"
     CDS             8312..8860
                     /locus_tag="WJJ54_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEZ7341835.1"
                     /translation="MARLTVHTLETAPEAAKARVEAVLQNNGFIPNLIGVLSNAPEAL
                     AFYQEVGKLNAANSLTAGEVEVIQIIAARTNQCGFCVAGHTKLATLKKLLSEQSVKAA
                     RALAAGEFDDAKLGALAAFTQAVMAKKGAVSDEELKAFFDAGYNQQQAVEVVMGVALA
                     TLCNYVNNLGQTEINPELQAYA"
     gene            8995..10086
                     /locus_tag="WJJ54_000955"
     CDS             8995..10086
                     /locus_tag="WJJ54_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HEZ7341836.1"
                     /translation="MNAQTLIANVAEFVKTKLKPIVDDIDRKGYYPEAFMRELGAIGG
                     FGAVGTEAEGGNGLGLATQIAVLREIGKECGATSFSAWCQAACAWYLHQTPNRAVKDK
                     YLADILQGKVLAGTGMSNTVKHLADIEKHNLQAERVEGGYTVNGALPWVSNIGEDHIW
                     ANTAQIGGGYVMFITGGQWEGVSLQNCPEFCALEGTRTFSLNFKDVFIPDEDIIAAPE
                     QFADYIQSIKAGFILLQIGIGAGVIDGSLGIIRLANVVNAEVNSYLDDGYDSLKARLD
                     GAWAETERLADLAWDGAPDNLATLKLREAAAVLALAAAQSAALHSGAKGYLMRSPAQR
                     RVREAMFVAIVTPAIKHLRKEIAAIEAAK"
     gene            10658..10828
                     /locus_tag="WJJ54_000956"
     CDS             10658..10828
                     /locus_tag="WJJ54_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HEZ7341837.1"
                     /translation="MAQYMCGPCGWIYDEEHGDPEHGIAPGTKFEDIPDDWKCPECGV
                     GKEDFYLLDFVI"
BASE COUNT         2556 a         2991 c         2939 g         2407 t
ORIGIN      
        1 tgtactgtct tcggctcgcc gccttgtcct tatttaaatt taattcacta tatttgcccg
       61 tgcgtttgtg ataaattcgg cactgtattt gatatgattt taacaaatcg ggaggggcaa
      121 tgttttggta tgtaatcggc ttttgctcct ttgtcgtcgc gctgctgtcg ctgtgggtca
      181 atgtcggcgc attcggtatg caggaagacg ataccccgca atcggattat gaaaaacgtt
      241 tgggcttggg tgcgaagctg aaaaacaaaa atacgccgga tacggaagaa aagcagcaat
      301 aaagatatga aatgccgtct gaaagatttt cagacggcat ttgctttgaa gcatgggaga
      361 cagtcaaaca tttatctcat gctcaaatgc gttcaggatt cggcggactt catccgcatc
      421 cttaaccgtt cggacgcggt caaacagcgt ttgcgccggg tcgaacgttt ttttcatcat
      481 gcccaaccat tgcttaagac gggcgatcgg gtatttattg tttgcctctt ttgtcaggca
      541 cagctcgaaa aactgccgta tccatttaga aacttcggca aaatccgtgt ctttgaccgg
      601 cccgccgttc tcgtattgct tgatttgccg cgccaaatcg gggcggatga ccgcgccgcg
      661 accgagcatc acgctgttgc agccgctgat tgttttgatg ccgatatagt cttgcaggct
      721 gaaaacgtcg ccgttggcgg taacgggaat attgacgctg tctcggattt tccttatcca
      781 ttcccaatgc gccggcggtt cgtaaccctc ggctttggta cgcgcgtgta cggtcagtcc
      841 gcatgcgccc acttcggcaa tcgcacaggc gcattccaaa gcccggcttt tgtcttcgta
      901 accgagccgc atttttgcgg tgagcggaat atgtgcgggc aaacgtccgc gcagcgtttt
      961 gacgatgtgg aatatcagtt ccggctcttt taaaaggatt gcgccgcctt tgtgtttgtt
     1021 gacggtgggc gcggggcagc cgaagttcaa atcgattttg ttcgcaccga agcggacggc
     1081 ttccagcgca ttcgccgcca tattgtccgc atcgctgccc aaaagttgga cggtgcaggg
     1141 cgtgccggaa aacgttttgt ttccgttggc gatttcgggg acatatttta accatatgga
     1201 tcgggaatgc acggtatggg taatgcgtac aaattcgctg acgcattcgt cgtagccgcc
     1261 aatacgcgtc agcaggtcgc gcatcacgtc atcgaccaga ccctgcatag gggcaaggat
     1321 gattcggttt ttttgtttgg gttcggttgt ttgtccgtca atcatgattt gggtaggtat
     1381 tgggtttaaa caatgccgtc tgaaggcttt cggcgttcag acgacatttc cgtgtccgtt
     1441 gttacagcaa tactttttcc acgccgccgt tattggcttt tttcacaaac tcgtccagcc
     1501 agttttcgcc gaggatgtgt ttcgccattt cgatgacgat gtagtctgca ggcatattgt
     1561 tgtcgtcggc gtagcggctc agaccttgca ggcaggcggg gcaggaggtg agcattttga
     1621 cgggttcgcc ctgcggcagc tctttgaggt ttttctcgat ttcctcttgt ttgcggaact
     1681 tgacttgcgt ggcgatgtct ggtcgtttga cggcgaacat accggactcg ccgcagcagc
     1741 ggtcgcttaa gacgactttc tgtcccatca ggctgctggc cagttgggtg gcattcatgg
     1801 ttttgatggg cgtgtggcag gggtcgtggt agaggtattg ctgaccttgt actccgttta
     1861 gttgcacgcc tttttcgagc agatattcgt ggatgtcgat gatacggcag cctgggaaga
     1921 tttcctcaaa acggtatttt tccagttggt cgtaacaagt gccgcaactg acgacgacgg
     1981 ttttgatgtc gaggtagttg agggtgttcg ccatacggtg gaaagcgacg cggttgttgg
     2041 tgctcatttc ttcggctttt gccttgttgc cgccggcatc ttgcggatag ccgcaacaca
     2101 tataacccgg cggcaggacg gtttgtacgc cgacgtgcca aagcatagct tggacggcaa
     2161 gcccgatttg gctgaacaga cgctccgagc cgcagccggg gaagtagaac acggcttcgg
     2221 catcttccgg agaagccgga ttgcggatga tggggatgct cttgccgtct tcgatgccca
     2281 ataaggagcg cggtgttttg gcgggtacgt ttttgggcag cgggcggttg atgaagtgga
     2341 taacctgttc tttaatcggg gctttgccga cgcttgcctt gggttcggct ttttgctttt
     2401 tagtgccgat cggaagaagt ttgccgattt tgtaggcgaa gttctgcgcg gggaagccgg
     2461 tctgtatcat cgcggctcgc agggctttga tggttttcgg gcctgtggcg ttcaaaaatg
     2521 ccatgcccat tgaagccgca ggcgcaaatc gtttgtggcc ggaatcggca aggtagttgc
     2581 ggacggctac ggtaacgtcg ccgaagtcga tattgacggg gcaaggctta acgcagcggt
     2641 ggcacacggt gcagtggtcg ccgatgtcca tcagttcttc aaaatgtttg acggaaacgc
     2701 cgcgccgggt ttgctcttcg tataagaagg cttcggtcaa aagccctacg ccgaggattt
     2761 tgttgcgggg gctgtacagc aggttggcac gtggaacgtg ggtggagcag acgggtttgc
     2821 atttgccgca gcgcaggcag tctttgacgg aatcggcaat cgtgccgagg tctgattttt
     2881 ccataatcag cgattccgcg cccaaaagct cgaaagacgg cgtgtaggcg ttgcgtaagt
     2941 ccgagccttt catcagtttg tggcggttga aggtgtgttt cggatcgact tggtttttgt
     3001 agttccaaaa cggctgcatt tcttcgtcgc ttaaaaattc gagcttggta atgccgatgc
     3061 cgtgttcgcc cgaaatcacg ccgttaagcg aacgggcgat tttcataatg cgttcgactg
     3121 agcggtatgc cgtctgaagc atgtcggcat cgtctgaatt gacggggata ttggtgtgga
     3181 cgttgccgtc gccggcgtgc atatgcagcg caacgaagac gcggctgcgt acggttttgg
     3241 cgtggatttt tcccaaacct tggataattt tggtatcggt tttgccgctg aagatttcag
     3301 aaagcggctt cattacgtcc gctttgacag acacgcgcag gcggaaatcg cggaatgcgg
     3361 taaagcagct ttcattgtct ttggcttcgg gcgcggcatg gacggctgcg ccatagcgag
     3421 ccttatagtc ggcaagcggc gcgtctaagt tagcaagtag ccattcccaa cgcgctttga
     3481 cagcggcaac gtgggcaagg gcgtgtttgc cgcgttcgcc caacagttcg gcggttggta
     3541 ggtctgttcc cattttgtcg atggggagtt tgccggacag atattgctcc aaggcggcac
     3601 agagtttgag tttgttttga atggaaagct caatgttgat gcgttcgatg ccgtctgaat
     3661 actcaccgag cctttcgagt gggatgacca cgtcttcgtt gattttaaag gcgttggtgt
     3721 gtttggcgat ggctgcggtg cggctgcggt cgagccagaa ggttttgcgt gcttcgggag
     3781 atatggcgat aaagccttcg ccgtcgcggg cgcgggcaag ttcgcagatg tgttcggcgg
     3841 ctgcctctac ggcggcttcg tcgtctgaaa ccacgtctgc cagcaagacc attttcggcc
     3901 ggcctttgcc tgccgctttg gtggcgtagc cgacggcgcg gacgtaacgc cagtccaaat
     3961 gctccaaacc ggccagccgc acgctgtcgt gggcgagcag gaaatcgcgg atttcgacga
     4021 tagaaggcgt agcggtggcg accgtaccga aaaactccat acacacggtg cgcgtgtgtt
     4081 tcggcatttt gtgcaacacg aaggcgacgc tggtgatgat gccgtccgtg ccttctttct
     4141 gcacgccggg taggccgctc aagaatttgt cggtaacgtc tttgcccaaa ccgactttgc
     4201 ggaatttgtg gccgggaatt tccaaacgtt cggttttaac aatattgagg ccgtctgaat
     4261 ccagcgtgtg aacgtcgaac acggcggttt cttcgtcgtg gattttgccg aaattatggc
     4321 gcacgcgctc gatgcgcagc cattcgcctt gagggttgac catctgccag taggcgaggt
     4381 tgtccaacgc cgtcccccac agtacggctt ttttgccgcc cgcgttcatc gccacattgc
     4441 cgcccacaca ggacgcatcg gcggaagtcg gatcgacggc gaacaccaaa cccgcctgat
     4501 gcgcggtttc ttctacccgc cgcgttacca cgcccgcgcc gcaatggata atcggatgtt
     4561 tgccatccaa gcccgccagt tcgacaaact ccacgccgcg atgtttgtcc agcttttccg
     4621 tattgatgac cgcgctcatt gcgtccaaag gaatcgcgcc gccggtataa cccgtaccgc
     4681 cgccgcgcgg gataataacc aagtccaact caattaaggc gcgcaccaaa ggcgcgactt
     4741 ccgcctccgt gtcgggattg acgacgacaa acggatactc cacgcgccag tcggttgcat
     4801 cggtaacgtg cgttacccgc gccagcccgt caaacataat attgtgtggc ttggtgattt
     4861 tgctcaaacg ctccaaaatc tgccgccgct tttggctggt ttcatcaaaa ctgctatcaa
     4921 aacgctcgac tgctttttct gctgcggcaa ccaacacatc cacttgccga ttatcgtcgc
     4981 ggcgtttgcg gatttcattt aagcggtggc gcatttcccg caccagcgcg gcgcggcgtt
     5041 tcgggtgctc caacaagtca tcgaccagat atggattgcg cacaactacc caaatatcgc
     5101 ccaacacttc aaacagcatc cgtgccgaac gtccggtttt acgctgtccg cgcaagtctt
     5161 gcaggatttg ccacgcttcg tcgcccaata atcggatgac gatttcgcgg tcggtgtagg
     5221 aagtatagtt gtaggggatt tcccgaatac gctgaggggc ggtagtcgtg gtcatggtgt
     5281 gtccgtgttt ggcagttttt atttgaatgc cgtctgaaaa gtcggtttca ggcgagtttg
     5341 aaaaggcgat aatgtagttc aatttttgat acttttcaat gccgaaacag gaaataccct
     5401 tatagaaaca aaataacgct ttgagaaatt gttgacaata ttatcaaata taaattttag
     5461 gtggtgtttc cggcgtatga ccgtatcaaa acggttgagt ttttcagaaa acccgttata
     5521 atgccgtttc tctgaggcgg gtctccccgc atggcaaatc ggaacaccgg gtcaggggcg
     5581 gaagccagca gcccactccg atgcgccagt gccgggggtt tggcccgccg ccctatttga
     5641 aacgccggag cttcgatgtt ccggcgttcc cgtatcgcac cgatgccgtc tgaaagccgt
     5701 tcagacggca ttttctttac tttgccataa cgtataacta caatgtgaaa acaattccaa
     5761 tgtgcatatg cacctgccga caattttaag gaaactgcca tgagcgcatc acaattactg
     5821 tcaagactga cccaaaccgt aggcgaaaaa tacatcatta ccgaccccac gaaaaccgaa
     5881 caataccgcc aaggctaccg cttcggcgag ggtaaggcgt tggcggtggt gcgtcccgga
     5941 agcattctgg aaatgtggaa aattctgcag gcgtgcgtcg aagcggacgt gattgtgatt
     6001 acgcaggcgg cgaataccgg cctgaccggc ggctcgaccc ccgacggcaa cgattacgac
     6061 cgcgacatcg tgattgtgaa caccatgcgg atgaacatca tccaaaccat caacaacaac
     6121 gaacaagtcg tctgcctgcc cggctcgacc ctgaaccagc ttgaattgct gctgaaacct
     6181 ttgggacgcg aaccgcattc ggtcatcggc tcatcctgca tcggcgcgtc cgttttaggc
     6241 ggcgtgtgca acaactccgg cggcgcgttg gtacagcgcg gcccggccta caccgaaatg
     6301 gcactgttcg cccaaatcaa cgaagaaggc aggttggaac tggtcaacca cttgggcata
     6361 gacttgggcg acacgcccga agaaatcctg accaacctgc aaggtcatca ttatcaaaac
     6421 aaagacatca aacaagacgc gggcaaaggg cacgaccacg cctattgcga acacgtccgc
     6481 caagtggacg aaccgaccgc cgcgcgtttc aatgccgacc ccgcccgcca ttacgaagcc
     6541 tcgggctgcg cgggcaaact gatggttttt gccgtccgtt tggacacctt cccgcaagaa
     6601 aaacaaaccg ccgtgttcta catcggcacg aacgacatca acgagctgac cgacatccgc
     6661 cgcgccgcct tgggcgaatt tgaaagcctg cctgtttccg gcgaatacat ccaccgccac
     6721 gctttcgaca ttgccgacgt gtacggcaaa gacacgtttt acgtcatcaa aaaattcggt
     6781 acgcaccaac tgccgaaatt atttgacttg aaggcgcgcg tggacaggtt cggcaaaaaa
     6841 gccagcttcc tgcccaaaca tttttccgac aaggcaatgc agttcgtcag caaatacctg
     6901 cccgaccacc tgcccaaatc catgcgcgat taccgcgaca aatacgaaca ccacctgatt
     6961 ctgaaaatgg gcgggaaagg cgtggatgag gcgcgcgcgt tcttaaaaga atattttgca
     7021 caccacagcg gcgcgttttt cgagtgcaac gccgaagaaa cccaagccgc gatgctgcac
     7081 cgtttcgccg tcgcctccgc cgccatccgc taccgcgccg tgcatgatga cgaagtggaa
     7141 gacttggtcg cgctcgacat cgccctgcgc cgcgacgatc gcgactggtt tgaaaaactg
     7201 ccgtcggaaa tcgacaataa aatcatccat aaactctact atggacattt catgtgccac
     7261 gttttccatc aggattacat catcaaaaaa ggcaacgact gcatggcgtt ggaacacgaa
     7321 atgctgcatc ttttagacca acgcggcgcg caatatcccg ccgaacacaa cgtcggtcat
     7381 ttgtatgaag ccaaacccgc gctcaaacag ttttaccgca aacttgaccc gaccaacagc
     7441 ttcaacccgg gcgtaggcaa aaccagcaaa aagaaaaact gggcggaata agcgcgtccg
     7501 ctttgaaggc aggcaatgcc gtctgaaggc aaaacgccgt tcagacggca ttgtcgggtt
     7561 tgaagttccc cgtcgggtaa tcgctttcaa accgtatgcc gacacacggg cgcgcccctc
     7621 ccaaatatag tggattaaat ttaaatcagg acaaggcaac gaagccgcag acagtacaga
     7681 tagtacggca aggcgaggta acgccgtact ggtttaaatt taatccacta taaagtctga
     7741 tcctaccttc ccaaagggca gggtttcaac cgaaaaggaa acacgatgaa accatacaaa
     7801 atctacaccc atcccgccct gccgccccaa gccgtcaaac aaggctggtc atggccgggg
     7861 ctcttgttcg gcacgctgtg ggcgtgtttc aaaagaatgt ggggtttggg gctggggctg
     7921 acgggcgcga tattcgtgct ggctgtgttt gcccaactgg tttacggcga cacgcccgcc
     7981 acagactcgg cgtttaacgt attgggcttg gcggtttccg tctggttcgg cgcaaagggc
     8041 aacagccttt atgcacgcca ccttttatcg cgcggctata ccgaattgcc cgaaacggtt
     8101 gaggcagcca atccccaagc cgcattggcg caatatttcg ggcgcggggg ccgataagcg
     8161 cgttttcttt tccatcgtgc cgtctgaaaa atgttcagac ggcatttctt ataacctttc
     8221 gtttgcagca cataaccaat cagtctttcc tattccgttc cgaaatgcat accatgcgcc
     8281 cgtacccaat atttgcgaac aaggaaagaa aatggcacgt ttaaccgtac acaccctcga
     8341 aaccgccccc gaagccgcca aagcgcgcgt cgaggcggta cttcaaaaca acggctttat
     8401 ccccaacctt atcggcgtat tatcaaacgc ccccgaagcc ttggcgtttt accaagaagt
     8461 cggcaagctc aacgccgcca acagcctgac cgccggcgaa gtcgaagtaa tccagattat
     8521 tgccgcccgc accaaccaat gcggcttctg cgtggcaggg cacaccaaac tcgcaaccct
     8581 gaaaaaactc ctttccgaac aatccgtcaa agccgcgcgc gctttggcgg caggcgaatt
     8641 tgacgatgct aaactcggcg cgctcgccgc ctttacccaa gccgtaatgg caaaaaaagg
     8701 cgcggtatcc gacgaggaac tcaaagcatt ttttgatgcg ggctacaacc agcagcaggc
     8761 agtcgaagtc gtgatgggcg tagccttggc aactttgtgc aactacgtca acaacctcgg
     8821 acaaaccgaa atcaaccccg aattgcaggc ttacgcctga tacggcaaac cgcccgaata
     8881 tcgggcggtt tttcaaaaac accccctcaa acaaaaacaa gccgcctaag cggcagggaa
     8941 gcagccgcgc atcaggcgcg cccccgattt ccccgcaaac cttaaggaac aaagatgaac
     9001 gcccaaaccc tgattgccaa cgttgccgaa ttcgtcaaaa ccaagctcaa acccatagtg
     9061 gacgacatcg accgcaaagg atactacccc gaagcattta tgcgcgaact cggcgcaatc
     9121 ggtggattcg gcgcagtcgg tacagaagcc gaaggcggca acggcttggg tttggcaacg
     9181 caaatcgccg tattgcgcga aatcggcaaa gaatgcggcg caacctcttt cagtgcgtgg
     9241 tgtcaggcgg cttgcgcgtg gtatctgcac caaacgccca accgggccgt caaagacaaa
     9301 taccttgccg acatcctgca aggcaaagta ttggcgggta cgggcatgtc caataccgtc
     9361 aaacaccttg ccgacatcga aaaacacaac ctccaagccg agcgcgtgga gggcggctac
     9421 acagtcaacg gcgcgctgcc gtgggtgtcc aacatcggcg aagaccacat ttgggcgaat
     9481 accgcccaaa tcggcggcgg ctacgtcatg ttcatcacag gcggacaatg ggaaggcgta
     9541 agcctgcaaa actgccccga attttgcgcc ctcgaaggca cacgcacctt cagcctgaac
     9601 ttcaaagacg tatttatccc cgacgaagac atcatcgccg cgcccgaaca gtttgccgac
     9661 tacatccaaa gcatcaaagc aggctttatc ctcctgcaaa tcggcatcgg cgcgggcgtg
     9721 attgacggca gcctcggcat catccgcctc gccaacgtcg tcaacgccga agtcaacagc
     9781 tatctcgacg acggctacga cagcctcaaa gcaaggttgg acggcgcgtg ggcagaaacc
     9841 gaacggctcg ccgacttggc gtgggacggc gcgcccgata acctcgccac cctcaagctg
     9901 cgcgaagccg ccgccgtact ggcacttgcc gccgcccaat ccgccgccct gcattccggc
     9961 gcaaaaggct acctgatgcg cagtcccgcc caaaggcgcg tccgcgaagc aatgtttgtc
    10021 gccatcgtaa cccccgcgat caaacacctg cgcaaagaaa tagcggcaat cgaagccgca
    10081 aaataaacag gcggaaaaaa cagaaacccc caccgcgtca ttcccgcaaa agcgggaatc
    10141 cagcccccaa cgcaacagga atccatcgga aaaaacagaa accccaaaac cgtcattccc
    10201 gcaaaagcgg gaatccagca aacgaaaaat cacaggaatc catcggaaaa acagaaacca
    10261 aacagacaag attcccgcct gcgcgggaat gacgcgggag cgggggtcgt cattcccgcg
    10321 aaagcgggaa tccagccccc aacgcaacag gaatccatcg aaaaaaccga aacctccaaa
    10381 ccgtcattcc cacggaagtg ggaatccagt aatcgaaaaa ccacaggaat ctatcgaaaa
    10441 aaaaccaacc ccaaaaaaac cgggcggata ccgcaccatc ctcccaaacc ctgatttata
    10501 gcggatgaac aaaaatcagg gcaaggcggc gaagccgcag acagtacaaa tagtacgggt
    10561 gcttcagtac tttagagaat cgttctcttt gagctaaggc gaggcaacgc cgtaccggtt
    10621 tttgttaacc cactatacaa aaaacaagga aacacaaatg gcgcaatata tgtgcggccc
    10681 ctgcggctgg atttacgatg aagaacacgg cgaccccgaa cacggcatcg cccccgggac
    10741 aaagtttgaa gacatccccg acgactggaa atgccccgaa tgcggtgtag gcaaagaaga
    10801 tttctacctg ttggatttcg tgatatagcg gcagccgcac ccttagggaa aaccccgtca
    10861 tccggcgttc cgcctgcggc ggcagggaac acc
//
LOCUS       DAWKJW010000050        10864 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.050, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000050 DAWKJW010000000
VERSION     DAWKJW010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10864
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.050"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(81..1226)
                     /gene="dapE"
                     /locus_tag="WJJ54_000957"
     CDS             complement(81..1226)
                     /gene="dapE"
                     /locus_tag="WJJ54_000957"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEZ7341838.1"
                     /translation="MTETQSLELAKELISRPSVTPDDRDCQKLLAERLHKIGFAAEAL
                     HFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADM
                     KTSIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYC
                     IVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQ
                     EVWDEGNKYFPPTSFQISNINGGTGATNVIPGELSVKFNFRFSTESTEAGLKQRVHAI
                     LDKHGVQYDLQWSCSGQPFLTQAGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKA
                     IAKELIELGPSNATIHQINENVRLDDIPKLSAVYEGILARLLAGNAV"
     gene            complement(1339..1959)
                     /locus_tag="WJJ54_000958"
     CDS             complement(1339..1959)
                     /locus_tag="WJJ54_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diadenosine tetraphosphatase"
                     /protein_id="HEZ7341839.1"
                     /translation="MLTPKSCDLFNIPFFQFSQLKKYQPESIPQIKADYKENWQIWQQ
                     LIQQVAAELGAPFAPPHIERWCNGWQVRAHFFAYFKYEQYKNSAAILSILLNRRRLSV
                     SLDWHCYKADVSPIALPDYNRWLDNFDTEKYASFDMWHGAESEYDDYRTVAQQNESDR
                     RLQNDEDFFCIGKHIERDDLGRQDVVKWIAETVEDLLSLYEACHGK"
     gene            complement(1993..2502)
                     /locus_tag="WJJ54_000959"
     CDS             complement(1993..2502)
                     /locus_tag="WJJ54_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ7341840.1"
                     /translation="MNPFETQSVTFAEPIEMLYACHGKVRRFCGQVAMLSDYIAENGC
                     NQLVLQTIRQITRYFNVAAPLHHEDEEENFFPLLLQYAPQAQESVDELLRQHVSLHGN
                     WDAVAAEFAKLEADNAYIPDAEAFKRFVAGYDVHLAIEEPLFDMGKMFIPKEKLTEIG
                     EIMAARRRR"
     gene            complement(2597..3148)
                     /gene="azu"
                     /locus_tag="WJJ54_000960"
     CDS             complement(2597..3148)
                     /gene="azu"
                     /locus_tag="WJJ54_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HEZ7341841.1"
                     /translation="MKAYLALISAAVIGLAACSQEPAAPAAEATPAAEAPASEAPAAE
                     AAPADAAEAPAAGNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKTSMGH
                     NIVIGKTEDMDGIFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLDPAKLADG
                     EYKFACTFPGHGALMNGKVTLVD"
     gene            complement(3429..3851)
                     /locus_tag="WJJ54_000961"
     CDS             complement(3429..3851)
                     /locus_tag="WJJ54_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HEZ7341842.1"
                     /translation="MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQT
                     ACIEDGRLVLLAANNMAASRLKMIAPSVLPQLAGLDASIRSVSVRLVPKPEKPPKTNT
                     LHLSKAALESFGSAAAKLEKRHPELAEALANLVRRHGA"
     gene            3982..6732
                     /gene="secA"
                     /locus_tag="WJJ54_000962"
     CDS             3982..6732
                     /gene="secA"
                     /locus_tag="WJJ54_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEZ7341843.1"
                     /translation="MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQ
                     AKTAEFKQRLADGQTLDGILPEAFAVCREASRRTLGMRHFDVQLIGGMVLHDGKIAEM
                     RTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISD
                     MQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDE
                     ARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGDYWVDEKAHQVILSEAGHEH
                     AEQILTQMGLLAENDSLYSAANIALMHHLMAALRAHSLFHKDQHYVIQDGEIVIVDEF
                     TGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTE
                     AFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVG
                     TTSIENSELVSHLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDI
                     VLGGNLKHQTDAIRADETLSDEEKQAQIAALENGWQAEHDKVMEAGGLHIIGTERHES
                     RRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPERGVAIEHNL
                     LTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDISDLMQEIR
                     SDVVSDLVDTYMPPDSMEEQWDIPTLENRLAAEFRLHEDIQSWLKADNAIDGQDIKER
                     LIERIENEYAAKTELVGKQAMADFERNVMLQVIDNQWREHLAAMDYLRQGIHLRSYAQ
                     KNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVAVVEEQPIGNIQSIHSES
                     PDMEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGK
                     LA"
     gene            6878..8650
                     /locus_tag="WJJ54_000963"
     CDS             6878..8650
                     /locus_tag="WJJ54_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEZ7341844.1"
                     /translation="MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKT
                     PSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMIVPKVRGQND
                     NPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPAAKAYLDKRGLSAEVIAHYGLGYA
                     PDGWQPLAQVFQPYPNTALVDTGMVIDNEGRYYDRFRHRIMFPIRNPRGQVIGFGGRV
                     LDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEAERILVVEGYMDVVALAQFGVGY
                     GVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFL
                     FLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTS
                     SPLLAQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
                     PVMLTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAESIKNHAAVPETAQV
                     LEYMRGSPYEETITRIFHSTHQSEEMNSSSEEDCENFQIGMKKLLNELKYSQIEALKQ
                     KSLQSGLNESEKKLLLSLLTAKQN"
     gene            8837..10765
                     /gene="rpoD"
                     /locus_tag="WJJ54_000964"
     CDS             8837..10765
                     /gene="rpoD"
                     /locus_tag="WJJ54_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEZ7341845.1"
                     /translation="MSRNQNHEEYQDDTRPLSIEEQRARLRQLIIMGKERGYITYSEI
                     NDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAA
                     LSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSI
                     AEILELIEKIRKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENED
                     DEESEEDADEISAANLAELKQKVIGHFAQIEKDYKKMIGRLEKHHSRHKDYLAYRDAI
                     ANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEI
                     TNLEWIEEEIAKGRVWSDALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSS
                     EKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
                     FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLA
                     ELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHE
                     VTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRH
                     PTRSDRLRSFLDSEDSKL"
BASE COUNT         2851 a         3014 c         2674 g         2325 t
ORIGIN      
        1 aatttaatcc actatatctc aaacccacat taggtctaat caaatggtcg gacatccata
       61 tccgacagcc cattttcttt tcagacggca tttccagcca acaagcgcgc caatatcccc
      121 tcatacaccg ccgacagctt cggaatatcg tccagccgca cgttttcgtt gatttggtgg
      181 atggtcgcat tggacgggcc taattcgatg agttcttttg caatggcttt gatgaagcgt
      241 ccgtccgaag tgccgccggt ggtggacaat tcggcctcaa tgccgcaggt ttcggcaatg
      301 gctgcgcgtg ccacgtcggt cagtttgccc gcttgggtca gaaagggctg ccccgaacac
      361 gaccactgta aatcgtattg cacgccgtgt ttgtccaaaa tggcgtgaac acgttgtttc
      421 agccctgctt cggtggactc ggtggagaag cggaaattga atttgacgct cagctcgccc
      481 ggaatgacat tggtcgcgcc tgtaccgccg ttgatattgg aaatttgaaa gctggtcggc
      541 gggaagtatt tgttgccttc gtcccagact tcctgcgtca gctctaacaa ggccggggca
      601 aaagtatgca cgggattgat tgccaaatgc ggataggcaa tatggccttg cttgcctttg
      661 acggtcaggt tgcccgacag cgagccgcgc cggccgtttt taatcatatc gcccaatttg
      721 tccacggctg tcggttcgcc gacgatgcag tagtcgataa gctcgtcgcg cgctttcaat
      781 acatcgacga ctttggtcgt gccgtccaac gcgtcgccct cttcgtcgga agtaatcaga
      841 agcgcaatgc tgccttggtg gtcgggatgt tcggcaacga agcgttcaca ggcggtaacg
      901 aagcaggcga tgctggtttt catgtctgcc gcgccgcgcc cgtataatct tccgtcgcgc
      961 tcggccggtt cgaacggggg cgaatcccat ttttcgacag gacctgtcgg tacaacgtcg
     1021 gtatgccctg caaaacagac gacgggagct ttcgtgccgc gtcgcaacca gatgtttttg
     1081 gtgtcgccga aatggagtgc ttcagccgca aaaccgattt tgtgcaggcg ttcggcaagg
     1141 agtttttggc aatccctgtc gtcaggggta acggatggtc gggaaatcag ctctttggca
     1201 agctctagtg attgagtttc ggtcatattt gttcactttt gaaattagac cgtctgaaac
     1261 gttctgaatg tgattttcag acggcattta ggttaggttg gcatacgggg tgggtatttt
     1321 acccatcagt cttctgaatc atttgccgtg acacgcttca taaagcgaca gcaagtcttc
     1381 cactgtttcc gctatccatt tcacgacatc ctgcctgccc aaatcgtcgc gctcgatgtg
     1441 tttgccgatg cagaagaaat cttcgtcgtt ttgcaacctt cggtcggatt cattttgctg
     1501 cgcgacagtg cggtagtcgt cgtattcgct ttccgcgccg tgccacatat cgaaagaagc
     1561 gtatttttca gtatcaaaat tatccaacca acggttgtaa tcaggcagcg caatcggcga
     1621 cacgtcggct ttgtagcaat gccagtccaa gctgacactc aaacggcggc ggttgagcag
     1681 tatcgacaaa atcgcggcgg aatttttata ttgttcgtat ttgaagtagg caaagaaatg
     1741 ggcgcgaacc tgccagccgt tgcaccagcg ttcgatgtgc ggcggcgcaa acggcgcacc
     1801 caattcggcg gcaacctgct gaatcagctg ctgccatatc tgccagtttt ccttgtagtc
     1861 ggctttgatt tgcggaatgc tttcaggctg gtatttttta agctgggaaa attggaaaaa
     1921 cgggatattg aacaaatcgc aacttttcgg ggtcagcata atatatcctt gagacgattg
     1981 tttcagacgg cattatctgc gccggcgcgc cgccatgatt tcgccgattt cggtcagttt
     2041 ctctttgggg atgaacatct tgcccatgtc gaacaagggt tcttcaatcg ccaaatgcac
     2101 atcatatccc gccacaaagc gtttgaacgc ttccgcatcg ggaatatagg cattgtctgc
     2161 ttcgagtttg gcaaattcgg cagccacggc atcccagttg ccatgcaggc ttacatgttg
     2221 gcgtaaaagc tcgtccacgc tttcttgggc ttgcggcgca tattgcagca ggagcgggaa
     2281 aaagttttct tcttcgtcct catggtgcag cggcgcggca acgttgaaat accgggtgat
     2341 ttggcggatg gtttgcaaaa caagctgatt gcagccgttt tcggcgatgt agtccgacag
     2401 catcgcgact tggccgcaaa aacggcgtac tttgccgtgg caggcataca gcatttcaat
     2461 cggttcggca aaggtaacgc tttgggtttc aaacggattc atgttttcgt tctcaacggg
     2521 cacttttcaa gcagtcattt tataataaaa cagcctgcac aaagcaggct gtccgtcttt
     2581 tgagacttta agcggattaa tcgaccaaag tcactttgcc gttcatcaaa gcaccgtgac
     2641 ccgggaaggt gcaagcgaat ttgtattcgc cgtcagccag tttggcagga tccagagtca
     2701 aagaagattc ttcgccgcca ccgatcagtt tggtgtgggc aacaacgcgc gcatcgtcag
     2761 gtttaacgta gtcagtgtca gctgcgccaa cgccatcttt gaaaataccg tccatgtctt
     2821 cagttttacc gatgacaatg ttgtgaccca tgctggtttt aggttgggta ccggtgtgtt
     2881 tcagggtgat ggtgaattcc ttacaagctt tgcttacttg gatgtcttta gtgttgaact
     2941 gcatattgtc gttggattcg acagttgccg cacagttgcc ggcagcaggg gcttcggcag
     3001 catctgcagg agcagcttcg gcggcaggcg cttcggaagc gggtgcttca gcagcaggag
     3061 ttgcctcggc agcaggcgcg gcaggttctt gagagcaggc agccaaaccg ataacggcgg
     3121 cagaaatcag agccagatac gctttcataa caaatctcca atcgataaaa taatattcgg
     3181 ttttacagaa atcaaagtgc aaccgccatt aacaaaacct tgaaaaagat tccgccgcgt
     3241 tgcacaaaca gatgtttcgg agcggcattt tgctacaaat ttcatttgaa atcaaagcct
     3301 gtctgcaagt ttacaatcgt ttactttaaa aggggcaatt ttaccccgaa cctatttctt
     3361 tagtattaga cccattatcc tttacttctt aatattaacg gatgtttaca caaattcccg
     3421 tatacatttt atgcgccatg ccttctaacc aagtttgcca atgcctccgc caattcggga
     3481 tgccgttttt ccaactttgc cgccgccgaa ccgaaactct ccagcgcagc cttactcaaa
     3541 tgcagggtat tggttttcgg cggtttttcc ggtttcggga ccagcctgac cgaaacagag
     3601 cgtatcgaag cgtcaagccc tgccaactgc ggcaataccg acggtgcaat cattttcaag
     3661 cgcgatgccg ccatattgtt tgccgccaaa aggacaagcc tgccgtcttc gatacatgcc
     3721 gtctgaaaat gcgggtgcag gttggcaggc agcagttttt tcacggcggc atccaaccgc
     3781 cgccactgtc ccgcctgttt caaaagtccg gaaagcagcg cgtcccgcct gcccaactgt
     3841 tccaaattca taaaacatac acccaaaaag attgaaatac cgcaaacgcg cctttatttc
     3901 agacggcatt agcactttgc acaaacgctt gtgttaaaat cgcgttttcg cccactatta
     3961 tatcaggcgc aggaattatt catgctgaca aacattgcca agaaaatctt cggcagccgc
     4021 aacgaccgct tgctgaaaca ataccgtaaa tccgttgcca gaatcaacgc gctcgaagaa
     4081 cagatgcaag ccctaagcga tgctgatctg caagccaaaa ctgctgaatt caaacaacgc
     4141 ctcgccgacg gtcagacttt ggacggcatt ttgcccgaag ccttcgccgt ctgccgcgaa
     4201 gcgtcccgcc gcaccctcgg tatgcgccac ttcgacgtgc agcttatcgg cggtatggtg
     4261 ctgcacgacg gcaaaatcgc cgaaatgcgt accggcgaag gcaaaaccct ggtcgccacc
     4321 ctcgccgtct atctcaacgc gctggccggc aaaggcgtac acgtcgttac cgtcaacgac
     4381 tacctcgcct cgcgcgacgc aggcattatg gagccgctct acaatttcct cggcctgacc
     4441 gtcggcgtga ttatttcaga tatgcaaccg ttcgaccgtc aaaacgccta tgccgccgat
     4501 atcacctacg gcaccaataa tgaattcggc ttcgactacc tgcgcgacaa tatggttacc
     4561 gaccaatacg acaaagtgca gcgcgaactg aatttcgccg tcgttgacga agtggactcc
     4621 atcttgattg acgaagcgcg cactccgctg attatctccg gccaggcaga cgacaacatt
     4681 cagttgtacc aaatcatgaa caccgttccg ccccacctcg tccgccaaga aaccgaagaa
     4741 ggcgaaggcg actactgggt agatgaaaag gcgcaccagg tcatcctgag cgaagcaggt
     4801 cacgaacacg ccgagcaaat cctgacccaa atgggattgc tggcagaaaa cgactccctc
     4861 tattccgccg ccaatatcgc cctgatgcac caccttatgg cggcattgcg cgcgcattcc
     4921 ctcttccaca aagaccaaca ttacgtcatc caagacggcg aaatcgtcat cgtggacgaa
     4981 ttcaccggcc ggctgatgtc cggccgccgc tggtcggagg gtctgcatca agccgtcgaa
     5041 gccaaagaag gcgtggaaat caaacgcgaa aaccaaaccc tcgcctccat caccttccaa
     5101 aactatttcc gcctgtacac caagctctcc ggtatgaccg gtacggcaga taccgaggct
     5161 ttcgagttcc aaagcattta taacctcgaa accgtcatta tcccgaccaa ccgccccgta
     5221 cagcgcaaag acttcaacga ccagattttc cgttccgccg aagaaaaatt cgaagccgtc
     5281 gtcaaagaca tcgaagaatg ccacaaacgt gggcagcccg tcctcgtcgg caccaccagc
     5341 atcgaaaact ccgaactggt ctcccacctt ctgcaaaaag ccggactgcc gcacaacgtc
     5401 ctcaacgcca aagaacacga acgcgaagcc ctgattgtcg cccaagccgg caaagtcggc
     5461 gcgattaccg ttgccaccaa tatggcggga cgcggtacgg acatcgtttt aggcggcaac
     5521 ctgaagcacc aaaccgatgc catccgtgcc gacgaaacct tgagcgacga agagaaacag
     5581 gcacaaatcg ccgcactcga aaacggctgg caggcagaac acgataaagt aatggaagca
     5641 ggcggcctgc acatcatcgg tacggaacgc cacgaaagcc gccgtatcga caaccaattg
     5701 cgcggacgtt ccggccgtca gggcgacccc ggatccagcc gtttctacct ttcgtttgaa
     5761 gacccgctgc tgcgcttatt cgcactcgac cgcgccgccg ccatcctcaa ccgtctcgcc
     5821 cccgaacgcg gcgttgccat cgaacacaac ctgctgacgc gccaaatcga aggggcgcaa
     5881 cgcaaagtcg aaggcagaaa cttcgatatg cgcaaacagg ttttggaata cgacgacgtt
     5941 gccaacgaac agcgcaaagt catttacagc cagcgcaacg aaattctgac cagcaaagac
     6001 atcagcgacc tgatgcagga aatccgttct gatgtcgtca gcgacctcgt ggatacctat
     6061 atgcctcccg acagcatgga agaacaatgg gacatcccga ctttggagaa ccgtctggct
     6121 gccgaattca gactgcacga agacatccaa tcctggctga aggcggacaa tgcgattgac
     6181 ggtcaagaca tcaaagaacg cctgatcgaa cgcatcgaaa acgaatatgc cgccaaaacc
     6241 gaactggtcg gtaagcaggc aatggccgat ttcgagcgca acgtgatgtt gcaggtcatc
     6301 gacaaccaat ggcgcgaaca cctcgccgct atggactacc tgcgacaagg catacacctg
     6361 cgcagctatg cccaaaaaaa tccgaagcag gaatataaac gtgaagcctt taccatgttc
     6421 caagacctgt ggaacggcat caaattccat attgcctccc tgcttacctc ggttcaaatc
     6481 gaacaaaacc ctgtcgcggt ggttgaagag caacccatcg gcaacatcca gtccatccat
     6541 tccgaatcgc ccgatatgga agaacttttg ggtcagtcgc aaaccgattt ggttaccgag
     6601 gcctttaatc ccgatggaac ggatttcagc cccgaagcct tggaagcgcg gggacaaatc
     6661 gtccaccgca acgacccctg cccctgcggc agcggtttga aatacaaaca atgccacggc
     6721 aaactggctt aagcgtttga acgcaaatgc cgtctgaaca tccgatttcc ggtttcagac
     6781 ggcattttgc ctgaaccgcc acatccgact gccattccga aaaatcccga tttcgtaccg
     6841 tccgtaccaa aaacagacat cccgtccgcc ccacatcatg attccatccg acttcattga
     6901 cgagctttta gccaaaaccg atattgtcga tattatcgac gagcaggttc cgctgaaaaa
     6961 aggcggggcg aactatatgg cgtgttgccc gttccacaag gaaaaaacgc cgtcgttttc
     7021 ggtcagtccg accaaacagt tttaccactg tttcagttgc ggggcgcacg gttcggcgat
     7081 tggttttgtg atggaacatc aggggctgtc gtttccggag gcggtgcagt tccttgccga
     7141 ccgcgtgggt atgattgtgc ctaaagtgcg cgggcaaaac gataatcccg aagtccgtgc
     7201 cgagcgcaag aaaaaacagc agacgctgga ggaaacgacg gctgcggcag ctgattttta
     7261 tgcgcaacag ctaaaattca atccggcggc aaaagcttat ttggacaagc gcggcttgag
     7321 tgcagaagtt atcgcgcatt atggtttggg ctacgcgccc gacggctggc agcctttggc
     7381 gcaagtgttc caaccgtatc cgaataccgc gttggtggat acggggatgg tgattgacaa
     7441 tgaggggcgg tattacgacc gcttccgcca tcggattatg ttccctatcc gcaatccgcg
     7501 cgggcaggtc atcggtttcg gcggcagggt gctggacgac tccaaaccca aatatctaaa
     7561 ctctcccgat acacctttgt ttgacaaagg gaaaaacctt tacggcttgt atgaggggcg
     7621 tgccgctgtc aaggaagcgg agcggattct ggtggtcgaa ggctatatgg acgtggtcgc
     7681 gctggcacag ttcggcgtgg gctacggcgt ggcggccttg ggcacggcaa caacagcgga
     7741 acacgtcaaa atcctgatgc gtcaggcgga cagtatttat ttctgtttcg acggcgacag
     7801 cgcggggcgc aaagcggctt ggcgcgcgct ggaaaacgcg ttgccgcagt tgaaagacga
     7861 caaatcgctg cattttttgt tcctgcccga ggaacacgac cccgacagtt acatccgtgc
     7921 ctacggcaaa gcgcaatttg aagacgcgct tctgaatcaa agcaagcctt tgtcggagta
     7981 tttctgggaa cacctttcag acggcattca tctcaatacg caggaaggca aggcggaatt
     8041 ggtgaaaacc agttcgccgc ttttggcgca gattaccgcg ccggcattgg cttatttgtt
     8101 aaaacaacgg cttagcgaac tggtcggcat cgaccccgac aacctcgcgc aactgctagg
     8161 acaggaagcg ccgaagcggc acgtcaaaca aaaaaactac aaactgcctc cgatttccgt
     8221 caaacagccc gtcatgctga cgctggtaca gcggcaaatc cgcagcctct tgataaatcc
     8281 ggattgggct gcatatatag acctgcccga ttatctggcg ttggacggtg atttcgcctg
     8341 ccttgccaat cttgccgaat cgattaaaaa ccatgccgcc gtacccgaaa ccgctcaggt
     8401 tttagagtat atgcgcggct cgccttacga agaaacgata acccgaatct tccattcaac
     8461 gcaccaatcg gaagaaatga acagcagcag tgaagaagat tgcgagaatt tccaaatcgg
     8521 catgaaaaaa ctgctcaatg agttaaaata cagccaaatc gaagcattga aacaaaaaag
     8581 cctgcaatcc ggcttaaatg aaagcgagaa aaaacttttg ctgtcgttgc tgaccgcaaa
     8641 acaaaattga ccggcggatt ccgccacccg taaacccgtt atgccgtctg aaaagcactt
     8701 accccggctg caacaacgac acctgcagaa cacccatccc aaaaagcctt cagacggcat
     8761 cagagtaccc gctctgccac gccttcaggt gcgttcaaac gcaaaccgtc ggcaccttac
     8821 caacagaaag cagacaatgt ccagaaacca aaatcacgaa gaatatcaag acgacacccg
     8881 tccgttaagc attgaagagc aacgcgcgcg cctgcgtcag ctcatcatca tgggtaaaga
     8941 acgcggctac atcacctact ccgaaatcaa cgacgccctg ccagacgata tgtctgatgc
     9001 cgaccaaata gacaatatcg tcagcatgat ttccggtttg ggcatccaag ttaccgaaca
     9061 cgcccccgat gcggaagaca tattgttaag cgacaatgcc gccgttaccg acgatgatgc
     9121 cgtcgaagaa gccgaggccg ccctttccag tgcagattcc gagttcggca gaaccaccga
     9181 ccccgtccgt atgtatatgc gcgaaatggg gcaggtcgac ctgctgaccc gcgaagacga
     9241 aatcatcatc gcaaaaaaaa ttgaaaacgc cctgaaaaat atggttcagg ccatctccgc
     9301 ctgcccggga tccattgcgg aaatcttaga actcatcgaa aaaatccgca aagacgaaat
     9361 ccgcgtcgac gaagtcgtag aagccattat cgacccgaat gaagtattgc tcaacgaatt
     9421 gggcttgggg cacttggaaa ccacagcgcc cgagaaacct tccaacgaca attcggacga
     9481 aaacgaagac gacgaagaat cggaagaaga tgcggatgaa atctcggcag ccaatctcgc
     9541 cgaattgaaa caaaaagtca tcggccactt tgcccaaatc gaaaaagact acaaaaaaat
     9601 gattggccgt ttggaaaaac accacagccg gcacaaagac tatctcgcct accgcgacgc
     9661 gattgccaac aaactgctgg aagtccgttt cgccacccgg caaatcgaca gcctcagcag
     9721 cagcctgcgc gggaaagtag aaaacatccg caaactcgaa cgcgaaatcc gcgacatctg
     9781 cctcgaccgc gtccatatgg aacgcgacta cttcatccaa aacttcctgc ccgaaatcac
     9841 caatctagaa tggattgaag aagaaatcgc caaaggcagg gtttggagcg acgcgctcga
     9901 ccgcttccgc cacgccatcc tcgaaaaaca aaccgagttg gcggatatgg aaaaagaaac
     9961 ccgcatttcc atcgaagagt tgaaagaaat caacaaaaat atggtgtcga gcgaaaaaga
    10021 aaccgcagcc gccaaacagg aaatgattca ggcaaacttg cgcctcgtga tttccatcgc
    10081 caaaaaatat accaaccggg gcttacaatt ccttgatctg attcaggaag gcaacatcgg
    10141 tttgatgaaa gcggtcgata agttcgaata ccgcagaggc tataaattct ccacctacgc
    10201 aacctggtgg atccgccagg caattacacg ctcgattgcc gatcaggcgc gtaccatccg
    10261 cattccggta catatgattg aaaccatcaa caagatgaac cgcatctcgc gccaacacct
    10321 tcaagaaacc ggcgaagaac ccgattccgc caaacttgcc gaactgatgc agatgcccga
    10381 agacaaaatc cgcaaaatca tgaaaatcgc caaagagccg atttcgatgg aaacccccat
    10441 cggcgacgac gacgattcgc acttgggcga cttcatcgaa gatgccaaca atgttgcgcc
    10501 ggccgatgcg gcaatgtaca ccagcctgca cgaagtaacc aaagaaatcc tcgaaagcct
    10561 gacaccgcgt gaggcaaaag tcctgcgtat gcgtttcggc atcgatatga acaccgacca
    10621 cacgctggaa gaagtcggca gacagtttga cgtaacgcgc gaacgcatcc gacaaatcga
    10681 ggcaaaagca ctccgcaagc tgcggcatcc gacaagaagc gaccgtttga gaagtttctt
    10741 ggacagcgaa gacagcaagc tgtaaaccaa aaaaccgcag gtttcaaata cctgcggttt
    10801 tttcttacac aataaacaac gcttccacat atcccacact cctatcccga gacctttgca
    10861 aaat
//
LOCUS       DAWKJW010000051        10825 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.051, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000051 DAWKJW010000000
VERSION     DAWKJW010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10825)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10825)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10825
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.051"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            205..1638
                     /gene="lpdA"
                     /locus_tag="WJJ54_000965"
     CDS             205..1638
                     /gene="lpdA"
                     /locus_tag="WJJ54_000965"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ7341846.1"
                     /translation="MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPA
                     LGGTCLNVGCIPSKALLQSSEHFHAAQHEFAEHGITVGDVKFDAAKMIERKDAIVTKL
                     TGGVKFLFQKNKVTSLFGTASFAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRP
                     LPQVAIDNVNVLDNEGALNLTEVPAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPT
                     FLAAADQQIAKEAFKYFTKEQGLSIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFD
                     KLIVAIGRIPNTKGLNAEAVGLEKDERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHK
                     ASDEGVAVAERIAGQKPHIDFNNVPFVIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGF
                     GANGRALAMGKAKGTVKVLADTKTDRILGVHMIGPVVSELVTEGVTALEFFASSEDIA
                     RIIHAHPTLSEVVHEAALAADKRALHG"
     gene            1763..2050
                     /locus_tag="WJJ54_000966"
     CDS             1763..2050
                     /locus_tag="WJJ54_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341847.1"
                     /translation="MNKEIVGIFFIPMGIISMCMAALWQMYVMMTETYTLNRFKDKEL
                     VWRVALLFISFSLAVYLLCPNSRKKGIVFFILGGGGAAMYLLARMWLPFSK"
     gene            2149..3315
                     /gene="sucC"
                     /locus_tag="WJJ54_000967"
     CDS             2149..3315
                     /gene="sucC"
                     /locus_tag="WJJ54_000967"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEZ7341848.1"
                     /translation="MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAV
                     VKAQVHAGGRGKAGGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDM
                     YPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQ
                     AREVAFQLGLKDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIG
                     IDSNALYRLPKIAELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDI
                     IKLKGGQPANFLDVGGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIV
                     AAVKEINVDVPVVVRLEGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAVNA"
     gene            3326..4216
                     /gene="sucD"
                     /locus_tag="WJJ54_000968"
     CDS             3326..4216
                     /gene="sucD"
                     /locus_tag="WJJ54_000968"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016655272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEZ7341849.1"
                     /translation="MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKG
                     GQTHLNLPVFNTMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPT
                     LDMLKAKRYLETNGNGTRLVGPNCPGVITPDECKIGIMPGHIHTPGRIGIISRSGTLT
                     YEAVAQTTKLGLGQSTCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEE
                     EAAEYIQSNVTKPVVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYT
                     RSPAELGTTMLEVLKTKGLA"
     gene            complement(4453..4782)
                     /locus_tag="WJJ54_000969"
     CDS             complement(4453..4782)
                     /locus_tag="WJJ54_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ7341850.1"
                     /translation="MDVQKQYSFETVAVCVLPNHIHAIWTLPPDDADYSLRWRLIKTK
                     FSAHFPHAENLSASKQRRHERGIWQRCFYEHTVRDETDLQHRADYIHSNPIKQRMSRA
                     KTESRKK"
     gene            complement(5207..5701)
                     /locus_tag="WJJ54_000970"
     CDS             complement(5207..5701)
                     /locus_tag="WJJ54_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endoribonuclease"
                     /protein_id="HEZ7341851.1"
                     /translation="MDKILIEQTLNNLDSLYQNNPADQVYYSKLAILELSGWLEETID
                     ELLIHYSQSKLNSDNLKYFEEKIKNTWGANYSSNIRNLLIIVVGLINVETIENNLKQN
                     GGYLDLLKNTTKSLKKARDDCAHTSTAGVTQQFQAPSYYKQVLINIYDSLIELERELN
                     LINP"
     gene            complement(5720..6784)
                     /locus_tag="WJJ54_000971"
     CDS             complement(5720..6784)
                     /locus_tag="WJJ54_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HEZ7341852.1"
                     /translation="MIDNKLKKLEEEQMFESDVNNIPPSDIVAFNELRSCADLLRLHS
                     SGQLNIQPDFQRDIVWSTLDQTRFIDSLTKQLPIPSLCISYDYKTDKRLVIDGLQRLN
                     SIINFLSDDEWKLSKLEDIDQRLAGKTVYTIKTREKELFERVQNVVIPITVIRCDYSK
                     KEHNQYLFTIFHRLNSGGVRLNNQEIRNCIYNGSFNKLLKELANSEETIRLFKKKKRF
                     ANEEMILRFFSFYYNLDDYNGSLAKFLNDMMFEKIYLDENEAESMKELYLRTVNFIYE
                     KIFDHYSSSNFGKTFLEGLLIGVAKNLDYLKNKENEEIKMLFDNFRNLPEYSIDSLKE
                     GLSNKDKVKNRIRASINCFS"
     gene            complement(6811..9669)
                     /gene="uvrA"
                     /locus_tag="WJJ54_000972"
     CDS             complement(6811..9669)
                     /gene="uvrA"
                     /locus_tag="WJJ54_000972"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEZ7341853.1"
                     /translation="MCNHRPQHSHDNDTIRIRGARTHNLKNIDLDIPRHKLVVVTGLS
                     GSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTS
                     HNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHNLPLSSQTVSQMVDAVLKLPEDTRVM
                     ILAPAVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRV
                     KVKADIKQRLAESFETALRHGNERALAMEMDSGEEHWFSARFACPVCSYSLPELEPRL
                     FSFNNPMGSCPTCDGLGNTNFFDPEKVVAHPELSLASGAIDGWDKRNQFYFQMIQSLA
                     RHYGFDVQAAWETLPAKIKKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLER
                     RYRETDSETVREKLREYQNHRACPSCGGARLRKEARYVYVSGEPLHEVSAWPLTKTHR
                     FFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLAS
                     QIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSVIVVEHDEDAIREADFV
                     VDMGPGAGEHGGNVLIADTPENVAKCENSVTGQYLSGKKSIAVPSERTPVNPGRMLVL
                     KGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLAKITARELNRAQEEPAPYD
                     DIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAGVPLSRERGYNVGRFS
                     FNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLD
                     MTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRD
                     TGRTLYILDEPTTGLHFADIALLLEVIGHLKGKGNSIVIIEHNLDVIKTADYIVDLGP
                     EGGDGGGKIIASGSPEEVAKVKGSYTGKYLKSILLINM"
     gene            9824..10621
                     /locus_tag="WJJ54_000973"
     CDS             9824..10621
                     /locus_tag="WJJ54_000973"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEZ7341854.1"
                     /translation="MNRLYPHPIIAREGWPIIGGGLALSLLVSICCGWWSLPFWVFTV
                     FALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQ
                     KSPADCTVTKVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
                     LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVTGVKTVLARLPLTAP
                     QIESEPESEPALQTASVETAANPSAEQRQIEAAAAKIQAAVQDVLKD"
BASE COUNT         2741 a         2470 c         2754 g         2860 t
ORIGIN      
        1 gatgtagcgt aatgtagtat cgtgctacaa taggctcaac gaacgattga ggccgtctga
       61 aacatttgat tcgaatgaat cggcagatat ggactttcag acggcttttt cttaaaacca
      121 tcaaaacgca gtcattcaaa ataaaaaaga aacgaaaagt atcgttttta ttttgagata
      181 ctgctaaaag caaaggatga cacgatgtct caatatgatg tagtagtgat tggtgcaggc
      241 ccgggcggat acgttgccgc catccgtgcc gcacaactgg gtttcaaaac tgcctgtgtc
      301 gatgcaggcg ttaacaaagc aggcaatgcc cctgcattgg gcggtacttg cttgaacgta
      361 ggctgtatcc cttctaaagc cctgttgcaa tccagcgaac atttccacgc agcgcaacac
      421 gagtttgccg aacacggtat cactgtcggc gacgtaaaat tcgacgcggc caaaatgatt
      481 gagcgcaaag atgccatcgt gaccaaactg accggcggcg tgaaattcct gttccaaaaa
      541 aacaaagtaa ccagtctgtt cggtacggct tcctttgctg gtaaaaatgg cgatgcttac
      601 caaatcgaag tcgataacaa aggcgagaaa accgttatcg aagccaaaca cgtcatcgta
      661 gccaccggtt ccgtaccgcg tccgctgcca caagtcgcta tcgataacgt gaacgtattg
      721 gacaacgaag gcgcattgaa cctgaccgaa gtacctgcca aactcggcgt gatcggttcc
      781 ggcgtgattg gtttggaaat gggttccgta tggaaccgcg tgggtgcaga agttaccatt
      841 cttgaagctg cgccgacctt cttggctgcc gccgaccaac aaatcgccaa agaagccttc
      901 aaatacttca ccaaagagca aggcttgagc atcgaattgg gtgtaaaaat cggtgacatt
      961 aaatctgaag gcaaaggcgt ttccgttgct tacgaaactg ctgccggcga agccaaaacc
     1021 gaagtattcg acaaactgat cgttgccatc ggccgtattc caaacaccaa aggcctgaac
     1081 gcggaagccg taggcttgga aaaagacgag cgcggcttta tcaaagtgga cggcgaatgc
     1141 cgtaccaacc tgcctaacgt atgggcaatc ggcgacgtgg ttcgcggccc gatgttggca
     1201 cacaaagcca gcgacgaagg cgttgccgtt gccgagcgca ttgccggtca aaaaccgcat
     1261 atcgacttca acaacgtacc gttcgtgatt tacaccgacc ctgaaatcgc ttgggtgggt
     1321 aaaaccgaag agcagctcaa agccgaaggc gtggagtaca aaaaaggtac ttcaggtttc
     1381 ggtgcaaacg gtcgcgcatt ggcaatgggc aaagctaaag gtacggttaa agtattggca
     1441 gataccaaaa ccgaccgcat cttgggcgta cacatgattg gcccggttgt cagcgaattg
     1501 gttaccgaag gcgtgactgc gctcgaattc ttcgccagca gcgaagacat cgcccgcatt
     1561 atccatgccc acccaacctt gtccgaagtg gttcacgaag ctgcattggc ggccgacaaa
     1621 cgcgctttgc acggttgata gacattaagg ccgtctgaaa tttttcagac gaccttaatg
     1681 ccttcgacaa attgaatgtt ccgagagctc cgttttctga tttataattc cgtcagacaa
     1741 acaaacagca tttacattcg ttatgaacaa agaaatagtc ggtattttct ttataccgat
     1801 gggcatcatc agcatgtgta tggccgcatt gtggcagatg tatgtgatga tgaccgaaac
     1861 ttatacgctc aaccgtttca aagataaaga attggtttgg cgcgtggcat tgttgtttat
     1921 cagtttcagc cttgccgttt atctgctctg tccgaattcg cgtaaaaaag gcatcgtctt
     1981 ttttattctc gggggaggcg gtgcagccat gtatctgctg gcgcggatgt ggttgccttt
     2041 cagcaagtga aacgacgatt ttccgaccgc cgaaaggtag tctgaaacgc acgggcttgc
     2101 catttggagg caaactcggg gcattccact aatctaaagg agaaatccat gaatttacac
     2161 gagtatcagg ctaaagaact gctggctagc tacggtttgc ccgtacaagg cggtattttg
     2221 gcacacaacg gcgaagaagc cgctgcagct tacgacaaat tgggcggcaa attcgctgtt
     2281 gtcaaagcac aagtacatgc cggcggccgc ggtaaagcgg gcggcgtaaa agtcgttaaa
     2341 agccgcgaag aagctaaaga agtggctgaa agcctgattg gcaccaactt ggtaacttac
     2401 caaaccgatg ccaacggtca acctgtcaac agcgttttgg tttgcgaaga tatgtatccg
     2461 gttcaaaccg agctgtactt gggcgcagtg gttgaccgtt ctacccgccg cgttacattc
     2521 atggcttcta ccgaaggcgg tgtggaaatc gaaaaagttg ctgccgaaac tccagaaaaa
     2581 atcttcaaag taaccgttga tccgctggtc ggcctgcaac cttgccaagc tcgcgaagtt
     2641 gccttccaac tgggcttgaa agacaaacaa atcaacgagt tcgtcaaact gatgaccggc
     2701 gcgtacaaag cgtttgtcga aaacgacttc gccctgtttg aagtcaaccc gctggcagtt
     2761 cgcgaaaacg gcgcactggc ttgcgtggac ggcaaaatcg gcatcgacag caacgcgctc
     2821 taccgcctgc caaaaatcgc tgaattgcgc gacaaatctc aagaaaacga acgtgaactg
     2881 aaagcttctg aattcgacct gaactatgtt gccctagaag gtaatatcgg ctgtatggtt
     2941 aacggtgccg gtttggcgat ggccaccatg gacatcatca aactgaaagg cggccaacct
     3001 gccaacttct tggacgttgg cggcggcgca accaaagacc gcgtggttga agcgttcaaa
     3061 ctgattttgg aagacaaatc cgttaaaggc gtattgatca acatcttcgg cggtatcgta
     3121 cgttgcgaca tgattgcgga agccatcgtg gcagccgtta aagaaatcaa cgtcgacgtt
     3181 cctgtcgttg ttcgtttgga aggtaacaac gccgaactcg gcgcgaaaat cctgaacgaa
     3241 tcaggcctga aactgacttc tgcagacggc ctgaatgacg cagccgaaaa aattgttgca
     3301 gccgtaaacg cctaaggaga aaagaatgag cgtattgatt aataaagaca ccaaagtatt
     3361 ggttcaaggt ttcaccggta aaaacggtac tttccactcc gaacaagctc tggcttacgg
     3421 cactaaagtt gtcggcggcg ttaccccggg caaaggcggt caaacccacc tgaacctgcc
     3481 tgtattcaac accatgaaag aagcggttaa agaaaccggc gcggatgcat ctgtaattta
     3541 cgttcccgct ccgtttgtgt tggattctat cgttgaagcc gttgattcag gcgtaggctt
     3601 ggtcgttgtg attaccgaag gcgtgcctac tctggacatg ctcaaagcca aacgttattt
     3661 ggaaaccaac ggcaacggta cccgcttggt cggccctaac tgcccgggcg tgattactcc
     3721 ggatgagtgc aaaatcggta ttatgccggg ccacatccac actccgggcc gcatcggtat
     3781 tatttcccgt tccggtacat tgacttacga agccgtggca caaaccacca aactgggctt
     3841 gggtcaatca acctgtatcg gtatcggcgg cgacccgatt cctggtatga atcaaatcga
     3901 cgcactgaaa ctcttccaag aagacccgga taccgacgcc atcatcatga tcggtgaaat
     3961 cggcggtact gcggaagaag aagcagccga atacatccaa tccaacgtaa ccaaacctgt
     4021 tgtaggttac attgctggtg ttaccgctcc taaaggcaaa cgtatgggcc acgccggtgc
     4081 gattatttcc ggcggtaaag gtactgccga ggaaaaattc gccgctttcg aaaaagccgg
     4141 tatcgcttac acccgcagcc ctgccgagtt gggcactacc atgctggaag tgttgaaaac
     4201 aaaaggtttg gcataatcag gtttgacaac tgattgaaca tcaaatgccg tctgaaaccg
     4261 gaaatcaggt ttcagacggc attttgtttg tcatttcaaa aagaggcagc ctcaacatac
     4321 ccacattatt ttttgccctt tgaggcagtc agaatattta tcggtcaaac aggagcaaac
     4381 ccgtaagtca ggttgcacac gccttgtttg aagtccggga atggataagt atcgcatttg
     4441 aaaagactaa tattattttt tgcgggattc tgttttagca cgcgacattc tttgtttgat
     4501 aggattggaa tggatgtagt ccgcacgatg ctgcaaatcc gtttcatcgc gcacggtgtg
     4561 ttcgtaaaaa caccgttgcc aaataccgcg ttcgtgccgc cgctgtttgc tggcagacag
     4621 gttttcggca tgagggaaat gtgcggagaa tttggtttta atcagccgcc agcgcaggga
     4681 ataatccgca tcgtcgggtg gcagcgtcca aatggcgtgg atatggttcg gcagcacgca
     4741 tacggcgacg gtttcaaagg aatattgttt ttgcacatcc atataagctg cccgcgaagt
     4801 cgatatgttc gacaagcagg cgcgatttcg gggcggaggg tttgacagtg aaacagaatg
     4861 tgccgccggc aatgaagttt ctgcgataac gcgacatagg atttttgttt gtggtttggg
     4921 tgttggagaa ggaatggttt gttgttttta ggttttagct ttgttaaatt tgacgttttc
     4981 agacgatatc ggaggtcgtc tgaaagcgct agcttcaacg aagttaaaaa ttgaaacggc
     5041 aaaccgtcaa tcaagcagca accgcgtgcg taccgcatat accctacacg ttggttttga
     5101 agtctcgttt gattcatagg cagggtgtgt agcgtagtca cgcacgcggt taattgagta
     5161 tgcaggctac ggcttgctac acgttggttt cgaagtttcg tgtgattcac gggttgataa
     5221 gatttaattc cctttctaat tctatcaatg aatcgtatat attaattaga acttgtttat
     5281 aataagatgg tgcttgaaat tgttgtgtta ctccagctgt ggaagtgtgc gcacaatcat
     5341 ctcgagcttt ttttaaggat ttagtagtat ttttcagtaa gtctagataa cctccatttt
     5401 gttttaaatt attctcaata gtctctacgt taattaagcc tacaacaata attaaaagat
     5461 ttcttatgtt agaactgtaa tttgctcccc acgtattttt tattttttct tcgaaatact
     5521 tgagattatc tgaatttagt ttactctgtg aataatggat caaaagttca tcaatagtct
     5581 cctctaacca cccacttaac tccaatattg ctaactttga ataataaact tgatcagctg
     5641 gattattctg ataaaggcta tctaagttat taagtgtctg ttctattaaa attttatcca
     5701 tgtttatacc tagtgttgct taagaaaaac aattaataga tgcacgtatc ctatttttta
     5761 ctttgtcctt attagataag ccctccttta gactatcaat gctatattct ggtaagtttc
     5821 taaaattatc aaatagcatt ttaatttctt cattttcttt attttttaaa taatctaaat
     5881 tttttgcaac accaatcaat aaaccttcaa gaaatgtttt tccaaaatta gatgatgaat
     5941 agtgatcaaa aattttttca taaataaaat tgactgtgcg taaatataat tctttcatag
     6001 attcagcctc attttcatct aaataaattt tttcaaacat catatcattt agaaacttag
     6061 ccaaactccc attgtaatca tctaaattat agtaaaagga gaaaaatctt aatatcattt
     6121 cttcattagc aaaccgtttt ttctttttaa ataatcttat tgtttcttca gaattagcca
     6181 attctttaag aagtttattg aatgatccat tataaataca atttcttatt tcttgattat
     6241 ttaatctaac tccacctgaa ttcagtcgat gaaaaatagt aaataaatat tgattgtgct
     6301 ctttttttga gtaatcacat ctgatcactg ttataggaat tactacattt tgtacgcgtt
     6361 caaataattc tttttcccta gttttgattg tataaacagt ttttccagca agtctttgat
     6421 caatatcctc aagctttgaa agtttccatt catcatcaga caaaaaattg ataatactgt
     6481 ttagacgttg taagccatct ataactaacc gtttatctgt tttataatcg taactaatac
     6541 ataaactagg aattggaagt tgcttcgtta aactgtcaat aaaccttgtt tggtctagag
     6601 tggaccaaac gatatctctc tggaaatcag gctgaatatt taattggcct gaagaatgca
     6661 aacgtaataa atctgcacat gatcttagtt cattgaaagc aacaatatca gatggaggga
     6721 tattatttac atcactttca aacatttgtt cttcttcaag tttttttaat ttgttatcaa
     6781 tcattttaga tactccataa aatttaagat ttacatattt attaggagaa tacttttcaa
     6841 atacttccca gtataactcc ccttaacttt cgctacttct tctgggctac ctgaagcaat
     6901 aattttacca cctccatctc ccccttccgg ccccaaatcc acaatataat cagccgtttt
     6961 tataacgtca agattatgct cgataatcac aatcgagttg cctttgcctt tcagatgacc
     7021 tatgacttcc agcagcaggg cgatgtcggc gaagtgcagg ccggtggtgg gttcgtcgag
     7081 gatgtagagt gttctgccgg tgtcgcgttt ggagagttcc aaagcaagtt tgacgcgctg
     7141 ggcttcgccg ccggagaggg tggtggcgga ttggccgaga cggatgtagc ctaagcctac
     7201 gtccatcaag gtttgcagtt tgcgcgatac ggtggggacg gcgtcgaaga attcgcgggc
     7261 ttcttcgacg gtcatgtcga ggacttgact gatgtttttg cctttgtatt ggatttcgag
     7321 ggtttcgcgg ttgtagcgtt tgccgtggca gacttcgcag gggacgtaca cgtcgggcag
     7381 gaagtgcatt tcgactttaa tcacgccgtc gccttggcag gcttcgcagc ggccgccttt
     7441 gacgttgaag gagaatctgc cgacgttgta gccgcgttcg cgcgagaggg gtacgccggc
     7501 gaagagttcg cggatggggg tgaacaggcc ggtgtaggtg gcggggttgg agcgcggggt
     7561 gcgaccgatg ggggattggt cgacgttgat gactttgtcg aggtgttcga ggccgcggat
     7621 gtcgtcgtat ggggcgggtt cttcttgggc gcggttgagt tcgcgggcgg tgattttggc
     7681 gagggtgtcg ttaatcaggg tggacttgcc gctgccggat acgccggtga tgcaggtaat
     7741 taaaccgagc ggcagttcga gggtaacgtt tttgaggttg ttgccgcgcg cgcctttgag
     7801 gacgagcatt cggccgggat tgacgggcgt gcgttcagac ggcacggcaa tggatttttt
     7861 gccgctgagg tattgtccgg taacggagtt ttcgcatttg gcgacgtttt cgggggtatc
     7921 ggcaatcagt acgttgccgc cgtgctcacc cgcacccggg cccatatcga cgacgaaatc
     7981 ggcttcgcgg atggcgtctt cgtcgtgttc gactacaatc acgctgttgc ctaaatcgcg
     8041 caggcgtttg agggtggcga gcaggcggtc gttgtcgcgc tggtgcaggc cgatggaggg
     8101 ttcgtccaaa acgtacatca cgccggtcag gccgctgccg atttggctgg cgagtcggat
     8161 gcgctgggct tcgccgccgg aaagggtttc ggcggagcgg gagagattca ggtaatccag
     8221 cccgacgtta atcaaaaagc cgagccgctc ggtgatttct ttgaggattt tttcggcgat
     8281 ttgttttttg ttgccgtcca aatccagcgt ttcaaagaat cggtgggttt tggtcagcgg
     8341 ccaggcggag acttcgtgca acggttcgcc gctgacgtaa acgtagcgcg cttctttgcg
     8401 caaacgtgca ccgccgcagc tcgggcaggc gcggtggttt tggtattcgc gcaatttttc
     8461 gcgcacggtt tcgctgtcgg tttcgcggta gcggcgttcg agattgggaa tgatgccttc
     8521 gaaggcgtgg ctgcggttga aggtggtgcc gcgttcggat aggtaggtga aatcaatgac
     8581 ttccttgccc gaaccgtgca acacgacttt tttgattttt gcaggtaggg tttcccaagc
     8641 agcctgcaca tcaaaaccgt aatgccgtgc cagcgactga atcatttgga aatagaactg
     8701 gttgcgtttg tcccagccgt caatcgcgcc cgaagccagc gacaattcgg ggtgggcgac
     8761 cactttttcg gggtcgaaga aattggtgtt gcccaagccg tcgcaagtcg ggcaggaacc
     8821 catcgggttg ttgaaggaaa acaggcgcgg ctctaattct ggcaggctgt acgaacatac
     8881 ggggcaggcg aaacgcgcgg aaaaccaatg ttcttcgccg ctgtccatct ccatcgccag
     8941 cgcgcgctcg ttgccgtggc gtaacgcggt ttcaaaactt tccgccagcc gctgcttgat
     9001 gtccgccttc actttcacgc ggtcgatgac cacgtcgatg ttgtgcttga tgtttttttc
     9061 cagcttcggc acttcgtcaa gctgatagac ctcgccgtcc acgcgcacgc gcgcaaaacc
     9121 ctgcgcctgc aagtcggcaa agaaatcgac aaactcgccc ttacgctcgc gtaccgccgg
     9181 cgccagaatc atcacgcgcg tgtcttccgg cagtttcaat acggcatcga ccatctgcga
     9241 tacggtttgg ctggatagcg gcagattgtg ttcggggcaa tacggcgtac cgacgcgggc
     9301 gtacaaaagg cgcagatagt cgtggatttc cgttaccgtg ccgacggtgg aacgcggatt
     9361 gtggctggtg gatttttgct cgatggaaat cgcgggcgac agaccttcaa tcaaatcgac
     9421 atcgggtttg tccatcatct gcaaaaactg ccgcgcatag gcggaaaggc tctcgacata
     9481 acggcgttga ccttcggcat ataaagtatc aaatgccagc gacgatttgc cgctgcccga
     9541 caatcctgtt accaccacca gcttgtggcg cggaatgtcc aaatcgatgt ttttcaaatt
     9601 atgcgtgcgc gcgccgcgta tgcggatggt gtcgttgtcg tgcgaatgtt ggggacgatg
     9661 gttgcacata atggatgccg cctgaaaaat aaaggaaaac cgatattgta gcactttctc
     9721 ggatgccgtc tgaagccgcg ttcagacggc atttgtcggc ggaacgcggc ggattccgct
     9781 ataatggcgg caattttaac tcgcttgaac aaaaggatga caaatgaacc gtctttaccc
     9841 ccacccgatt atcgcccgtg agggctggcc gattattggc ggcggtttgg ctttgagcct
     9901 gctggtgtcg atatgttgcg gctggtggtc tttgccgttt tgggtgttta ccgtatttgc
     9961 attgcagttt ttccgcgacc ctgcgcgtga gattccgcaa aatcctgaag cggtgttgag
    10021 tcctgttgac ggccgtatcg tggtggtcga gcgcgcacgc gatccgtatc gtgatgtcga
    10081 tgctttgaaa atcagtattt ttatgaacgt gttcaacgtg cattcgcaaa aatcgcctgc
    10141 cgattgtacg gtaacgaaag tggtctataa caaaggcaaa ttcgtgaatg cggatttgga
    10201 caaagccagc acggaaaacg aacgtaatgc ggtgttggcg actacggctt ccggtcgtga
    10261 aattactttt gttcaagtgg ccggtttggt ggcgcgccgt attttgtgct acacccaagc
    10321 aggtgcgaaa ctgtcccgcg gcgaacgtta tggctttatc cgcttcggtt cgcgcgtgga
    10381 tatgtatctg cctgtcgatg cgcaggcgca agtggcgatt ggcgataaag taaccggcgt
    10441 aaaaactgta ttggcgcgtc tgccgctgac tgcgccgcaa atcgaatccg agcctgaatc
    10501 tgagccagct ttacaaactg cttcggttga aacagcggca aacccatctg ccgaacaacg
    10561 gcaaattgaa gcagcggcgg ctaagattca ggcggctgtg caagatgtgt tgaaagatta
    10621 attttgcgaa ctgaaataga aaatatcagt accatcattc acacgaatga ggaagtttgg
    10681 ttttttgaat ttttgctaat gttcacaccg tcattcccac gaaagtggga atctagaaac
    10741 ttaacgttac gacgatttat cggaaacgac tgaaaccgga cggactggat tcccgcctgc
    10801 gcgggaatga caactcatta gttac
//
LOCUS       DAWKJW010000052        10779 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.052, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000052 DAWKJW010000000
VERSION     DAWKJW010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10779)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10779)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10779
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.052"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(62..676)
                     /locus_tag="WJJ54_000974"
     CDS             complement(62..676)
                     /locus_tag="WJJ54_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HEZ7341855.1"
                     /translation="MNFTRLLNQVLSTVQKKGNTFSDSPLNSFGGGAPVAGAASMLLN
                     GKNRKTITKIGSTAALGYLAYRGYQMWQQNKGRATVTQSDFQPAGETEETYSRTVLRT
                     MIAAAASDGMIDEAERRTIEQESGTDPETAAWLAAEYRLPASIGDIATAVGNDEALAA
                     EAYLAARLVCADLSRKETVFLARLSQALKLDDNLVESLERQLGF"
     gene            complement(712..2862)
                     /gene="dinG"
                     /locus_tag="WJJ54_000975"
     CDS             complement(712..2862)
                     /gene="dinG"
                     /locus_tag="WJJ54_000975"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HEZ7341856.1"
                     /translation="MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRT
                     LAREEGGEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQE
                     QLVDRDLPFLVEKSGLELTFALAKGRGRYLCPYKLYQLTQNNAQQNLLGFEAPEVLWD
                     SKPKPEELKLLHDIADEFSARRFNGDRDTWPEKIDDAIWLKVTNDRHGCLKTACPNRP
                     ECPFYLARDVLETVDVVVANHDLLLADISMGGGVILPAPENSFYCIDEAHHLPKKALS
                     RFAAEHSWNIAVWTLEKLPQLTGKIAALTDKAELANLADEAAASLLDSLHEWQFHLAE
                     EPSLSLGPSENDRRTNSEPTWLWEDGKIPEGLETTVSNTAVAVRSLLKHVIGLNDALS
                     AARREKEQDGALLDRLTGDFGIFIARIEQISAVWDLLSTVPLEGEEPLAKWITRRADD
                     KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGNFNLMLRQTGLQWLPETTT
                     LALKSPFDFEKQGELYIPPIYASPKDPEAHTAAIIEWLPKLISPGEAIGTLVLFSSRK
                     QMQDVALRLPGDYLPLLLVQGELPKAVLLQKHHRAIEEGKASIIFGLDSFAEGLDLPG
                     TACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRT
                     EQDYGRVTILDNRVKTQRYGQQLLAGLPPFKRIG"
     gene            2965..3189
                     /locus_tag="WJJ54_000976"
     CDS             2965..3189
                     /locus_tag="WJJ54_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341857.1"
                     /translation="MVFWLQRLKYPLLLWIADMLLYRLLGGAEIECGRCPVPPMTDWQ
                     HFLPAMGTVSAWVAVIWAYLIIESEKSGRY"
     gene            complement(3257..4558)
                     /locus_tag="WJJ54_000977"
     CDS             complement(3257..4558)
                     /locus_tag="WJJ54_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HEZ7341858.1"
                     /translation="MPSETARPLYADTCAAHTLVWFRQNLRIRDNAALCTAVAEGLPV
                     IGIWIDDAETDNPRRAAFYRQSAAELAQGLAGRGIPLYTAASPAELVRLAVRLNIRAV
                     IADESHTFADKLADNALWHELDKHGIALTFVNDRAVFGKTDLIPDGGTAHTDFDRYRE
                     VWLDRFSKQPPAGPDLFAAYRQPFPENLSAPPPAALSDGIFLPQNSGETAAWRQWRRF
                     LEQADSYSVLKDFPSRKHTSLMGAYLSAGCISPRLLARESLERRLNAWADNIIRRDFF
                     LQLALQHTDDDPSDGNPEHTLRLTLWQQGRTGIPIIDAAMRCLHKTGSLHPALRRLSA
                     DFFCHVLNLPRREGEIWFARQLTDFDAAINQGNWWLAASRHTCPDIAAASYRTDPDGT
                     FIKRHIPELAHLSADTVHTPWRFACSVDTHGYPAHPVAGIP"
     gene            complement(4548..5459)
                     /locus_tag="WJJ54_000978"
     CDS             complement(4548..5459)
                     /locus_tag="WJJ54_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ7341859.1"
                     /translation="MDTLFSLKVFRQVVQSGGFTRAADALGISTAMASKHVSHLENTV
                     QAKLLHRNSRNLSLTEAGEEYYRQCSYALDTLDDAAQKAAGGTEKPQGLLRVTMPLWF
                     AGSQICNWLAEYRERYPEVTLELILDNRHVDLIAEGVDLALRVSQTLSPSLIARPLAE
                     IEFALLASPDFLRRNGVPETPEEVAGLPAVLPTYTNQQKLDLTRKSDGKKYRLELTPV
                     IRTDNTLMMREMIKAGACIGYQPLWAAEHDLRCGTLVRLLPGYAVPTDRLNAVYADRA
                     FLSAKVRSFIDFLNEKIASRKGCRNAV"
     gene            5567..5965
                     /locus_tag="WJJ54_000979"
     CDS             5567..5965
                     /locus_tag="WJJ54_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEZ7341860.1"
                     /translation="MSDCCNRIQPVLLSVLRIVTAYLFLLHGTSKIFAFPIEMGSGSP
                     GGLLLLAGILEIVGGILLVLGLFARPAAFVLSGQMAVAYFMAHASGNALFPIANGGES
                     AVLFCFVFLYIAAAGGGAWSLDRLFFKRKA"
     gene            6014..6619
                     /locus_tag="WJJ54_000980"
     CDS             6014..6619
                     /locus_tag="WJJ54_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEZ7341861.1"
                     /translation="MTRQSLQQAAESRRSIYSLNKNLPVGKDEVVQIVEHAVLHTPSS
                     FNSQSARVVVLFGEEHDKVWQFVEDALRAAVPADSFEPTAQKLNLFKAGAATILFYED
                     QNVVKGLQEQFPAYAANFPVWADQANAMVQYAVWTTLAAVGVGANLQHYNPLPDAAIA
                     KAWNIPENWLLRAQMVIGGIEGAAGEKTFEPVAERLKVFGA"
     gene            6805..8916
                     /locus_tag="WJJ54_000981"
     CDS             6805..8916
                     /locus_tag="WJJ54_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ7341862.1"
                     /translation="MKISFHLALLPTLIIASFPVAAADTQDNGEHYTATLPTVSVVGQ
                     SDTSVLKGYINYDEAAVTRNGQLIKETPQTIDTLNIQKNKNYGTNDLSSILEGNAGID
                     AAYDMRGESIFLRGFQADASDIYRDGVRESGQVRRSTANIERVEILKGPSSVLYGRTN
                     GGGVINMVSKYANFKQSRNIGAVYGSWANRSLNMDINEVLNKNVAIRLTGEVGRANSF
                     RSGIDSKNVMVSPSITVKLDNGLKWTGQYTYDNVERTPDRSPTKSVYDRFGLPYRMGF
                     AHRNDFVKDKLQVWRSDLEYAFNDKWRAQWQLAHRTAAQDFDHFYAGSENGSLIKRNY
                     AWQQTDNKTLSSNFTLNGDYTIGRFENHLTVGLDYSREHRNPTLGYNRPFTASINPYD
                     RASWPASGRLQPVFTQNRHKADSYGIFVQNIFSATPDLKFVLGGRYDKYTFNSENKLT
                     GNSRQYSGHSFSPNIGAVWNINPVHTLYASYNKGFAPYGGRGGYLSIDTSSSAVFNAD
                     PEYTRQYETGVKSSWLDNRLDTTLSAYQIERFNIRYRPDAENNPYTWAVGGKHRSRGV
                     ELSAIGQIIPKKLYLRGSLGVMQAKVVEDKKNPDRVGIHLNNTSNVTGNLFFRYTPTE
                     NLYGEIGVTGTGKRYGYNSRNKEVTTLPGFARVDAMLGWNHKNVNVTFAAANLFNQKY
                     WRSDSMPGNPRGYTARVNYRF"
     gene            9114..9773
                     /locus_tag="WJJ54_000982"
     CDS             9114..9773
                     /locus_tag="WJJ54_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEZ7341863.1"
                     /translation="MKTAILIDGAFFIKRVRSLGLSQNPHDAKRIADLAFRYSMLHLK
                     DKINGTDQMDDLYRIFFYDCVPFEKKMHNPVSHRAIDFSKTPEAIFRCNLHTELKKKR
                     KLALRLGKLSDNTAWILKPQVMKNLLKNPSTQITENDVVLDVKQKGVDMRIGLDISSI
                     TLKKQADKIILFSGDSDFVPAAKLARREGIDFILDPMWNHVPPDLMEHIDGLKTKCPK
                     P"
     gene            9944..10639
                     /locus_tag="WJJ54_000983"
     CDS             9944..10639
                     /locus_tag="WJJ54_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ7341864.1"
                     /translation="MKLKTLALTSLTLLALAACSKQAETSVPADSAQSSSSAPAAPAE
                     LNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCAHLEPVLSEHIKTFKDDTYMRRE
                     HVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
                     DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQ
                     LVDKVREEQKKPQ"
BASE COUNT         2427 a         2725 c         3077 g         2550 t
ORIGIN      
        1 cgttttgagg ccggggtcgg aataaccgtt ttttgatgat tttccctccc tggctgtgtc
       61 atcaaaaccc caattgcctt tccaaactct ccaccagatt gtcatccagt ttcaaagcct
      121 gcgacaggcg ggcgaggaag acggtttctt tccgcgacaa atcggcacag accaaccttg
      181 ccgccagata ggcctccgcc gccaacgcct catcgttgcc gacggcggtg gcgatgtccc
      241 cgatgcttgc gggcaggcgg tattcggcgg cgagccatgc ggcagtttcg gggtctgtgc
      301 cgctttcctg ttcgatagtc cggcgttcgg cttcgtctat catgccgtct gaagcggcgg
      361 cggctatcat ggtgcgcaat acggtgcggc tgtatgtttc ttcagtttct ccggcaggtt
      421 ggaaatcgct ttgtgttacg gttgcccgcc ctttgttttg ctgccacatc tgatagcccc
      481 ggtaggcgag gtagcccaaa gcggcggtcg aaccgatttt ggtaatggtt ttgcggtttt
      541 taccgttcag cagcatggac gcggcaccgg caaccggcgc gcctccgccg aatgaattga
      601 gcgggctgtc ggagaaggtg ttgccttttt tttgaaccgt gcttaagact tggttgagca
      661 gtcgggtgaa gttcatgatt tttcctttct gttgcgggca gggcggtagg tttaccctat
      721 ccttttaaac ggtggcaggc cggctaataa ttgttggccg taccgctgtg ttttgacgcg
      781 gttgtcgagg atggttacgc ggccgtagtc ttgttcggtg cggatgaggc ggccgacggc
      841 ctggatgagt ttgatgccgg cttcggggac ggtgatttcg atgaaagggt tgccgccgcg
      901 ctgttctatc cagcggtttt gggttttttc gatggggttg tcgggcatgg cgaagggaag
      961 tttggcgatg atgacttgca cgcaggcggt gccgggcagg tcgagtcctt cggcaaagct
     1021 gtcgagtccg aagatgatgc tggctttgcc ttcttctatg gcccggtggt gtttttgcag
     1081 gagaacggct ttgggtaatt cgccttgtac gagcaagagc ggcaggtagt ctccgggcag
     1141 gcgcagggcg acatcctgca tttgtttgcg cgaggaaaac aagacgagcg tgccgatggc
     1201 ttcgccgggc gaaatgagct tgggcagcca ctcgatgatg gcggcggtgt gggcttcggg
     1261 gtctttgggg ctggcgtata tgggggggat gtagagttcg ccctgttttt caaagtcaaa
     1321 ggggcttttg agggcgaggg tggtggtctc gggcagccat tgcagcccgg tttggcgcag
     1381 catcaggtta aagttgccca aggattgcag ggtggcggag gtcaataccg cgcctgccgc
     1441 gcgccgccac aggctgttgg cgaggtggga cgcgctgctg atggggctgg cgttgaaaat
     1501 gtagtcgttt ttgtcgtcgg cgcggcgggt tatccatttt gccagcggct cttcgccttc
     1561 gagggggacg gtggagagca aatcccaaac cgcgctgatt tgttcgatac gggcgatgaa
     1621 gatgccgaaa tcgccggtca ggcggtcgag gagcgcgccg tcctgttctt tttcgcggcg
     1681 tgcggcagaa agcgcatcgt tcagcccgat aacgtgtttg agcaggctgc gcacagcaac
     1741 ggcggtgttg gaaacggtgg tttcgaggcc ttcggggatt ttgccgtctt cccacagcca
     1801 agtcggttcg ctgttggttc gcctgtcgtt ttcagacggc cccaagctca aagacggctc
     1861 ttccgccaaa tggaactgcc attcgtgcag gctgtcgagc aaggatgcgg cggcttcgtc
     1921 ggcaaggttg gcaagttcgg ctttatcggt aagcgcggca atcttgccgg tcagctgcgg
     1981 cagtttttcc agcgtccaaa cggcaatatt ccacgaatgt tcggcggcaa aacggctgag
     2041 ggcttttttg ggcaggtggt gcgcttcgtc tatgcaatag aaactgtttt cgggcgcggg
     2101 cagaatcacg ccgccgccca tactgatgtc ggcaagcaga aggtcgtggt tggcaacgac
     2161 gacatcgacg gtttccaaga catcgcgtgc caggtaaaac ggacattccg gacggttggg
     2221 acaggcggtt ttcaggcagc cgtggcggtc gttggtaact ttgagccaaa tcgcgtcatc
     2281 gattttttcc ggccaagtgt cgcggtcgcc gttgaaccgt cgggcggaaa attcgtcggc
     2341 aatgtcgtgc agcagcttca attcttcggg cttgggtttg ctgtcccaca atacttccgg
     2401 tgcttcaaaa ccaagcaggt tttgctgggc gttgttttgc gtcagttggt agagtttgta
     2461 agggcagaga tagcggccgc gccctttggc aagcgcgaag gtcagttcca aaccgctttt
     2521 ttcgaccaga aacggcaggt cgcggtcaac caactgctcc tgtaaggcaa ccgttgcgct
     2581 gctcacaatc agccgcttgc cgcgcgtctg cgccatgatg ccgcccgcca gcaggtaggc
     2641 aagcgatttg cccacgccgg tcggcccttc gattacggcg atgctctcgc cctcgcgctt
     2701 gggcggctcg ccgccttctt cgcgcgccaa cgtccgcgaa aaagcgttgg caaccgccgc
     2761 aatcatttcc cgctgcgaag cgcgcggacg gaaaccgggc aggtttttgc cgatgttttg
     2821 gtaatggtcg cggatggcgt ttttttctaa atcggtgagc atggcgtttt gtacggcggt
     2881 agaagtgggc ttattttaac attgcacgga agcggtacaa tatcgttgtc ggaatggggg
     2941 gtgaggtgaa tcgtgcggac gtggttggtt ttttggttgc agcgtttgaa atacccgttg
     3001 ttgctttgga ttgcggatat gttgctgtac cggttgttgg gcggcgcgga aatcgaatgc
     3061 ggccgttgcc ctgtgccgcc gatgacggat tggcagcatt ttttgccggc gatgggaacg
     3121 gtgtcggctt gggtggcggt gatttgggca tacctgatta ttgaaagtga aaaaagcgga
     3181 agatattgag tcattcggac gcaatgccgt ctgaaacgga agtttagacg gcatttgttt
     3241 taggttgccg taccgcttag ggaataccgg cgacaggatg ggcgggatag ccgtgggtat
     3301 cgaccgaaca ggcaaaccgc caaggcgtgt ggacggtgtc ggcggacagg tgggcgagtt
     3361 cgggaatgtg ccgtttgata aaagtaccgt ccgggtcggt acggtatgag gcggcggcaa
     3421 tgtcggggca ggtgtgccgt gaggcggcaa gccaccagtt gccttggttg attgccgcat
     3481 cgaaatcggt cagctgccgg gcaaaccata tctcgccttc gcggcggggg aggtttaaaa
     3541 cgtggcagaa aaaatccgcg ctcaagcgtc tcagggcggg gtggaggctg ccggttttgt
     3601 gcaaacagcg catcgcggca tcgataatcg gaatgccggt ccggccctgc tgccaaagcg
     3661 tcaggcgcag ggtgtgttca ggattgccgt ctgaagggtc gtcatccgtg tgctgcaagg
     3721 caagttgaag gaaaaaatcg cggcggatga tgttgtccgc ccacgcgttc agacggcgtt
     3781 cgaggctttc ccgcgcgagc aggcgcggcg agatgcagcc ggcactcaaa tacgcgccca
     3841 tcagcgaagt gtgtttgcgc gaggggaaat cctttaaaac ggagtaggaa tccgcctgtt
     3901 cgagaaaccg ccgccactgc cgccaagccg ccgtttcgcc gctgttttgc ggcaggaaga
     3961 tgccgtctga aagggcggca ggcggcgggg cggaaaggtt ttcggggaag ggttggcggt
     4021 atgccgcgaa taggtccgga ccggcggggg gctgcttgga aaagcggtcg agccatactt
     4081 cgcggtagcg gtcgaaatcg gtgtgtgccg tgccgccgtc gggtatcagg tcggttttgc
     4141 cgaaaacggc gcggtcattg acgaaggtta acgcgatgcc gtgtttgtcc aattcatgcc
     4201 aaagggcgtt gtcggcgagt ttgtcggcaa aagtatggga ttcgtcggcg atgacggcgc
     4261 ggatattgag gcggacggcg agccggacga gctcggcagg cgatgccgcc gtgtagagcg
     4321 ggatgccgcg ccctgcaagc ccttgggcga gttcggcggc ggattggcgg tagaacgcgg
     4381 cgcggcgagg gttgtctgtt tcggcatcgt caatccaaat accgataacg ggcaaacctt
     4441 cggcaacggc ggtgcataag gcggcgttgt cgcggatgcg gaggttttgg cggaaccaga
     4501 cgagcgtgtg tgcggcgcac gtgtccgcat aaagggggcg ggcggtttca gacggcattt
     4561 cggcagcctt tcctgctggc gattttttcg ttcagaaaat cgatgaagct gcggactttc
     4621 gcgcttaaga atgccctgtc tgcataaacg gcattcagcc ggtcggtcgg gacggcgtat
     4681 ccgggcagca gcctcaccag cgtgccgcag cgcaaatcgt gttccgccgc ccaaagcggc
     4741 tgataaccga tgcacgcgcc cgccttaatc atttcgcgca tcatcagcgt gttgtcggta
     4801 cggatgacgg gggtcagttc aagccggtat tttttgccgt ccgatttgcg ggtgaggtcg
     4861 agtttctgct ggttggtgta ggtcggcagg acggcgggca gccccgccac ttcttccggc
     4921 gtttccggca cgccgttgcg cctcaggaag tcgggcgagg caagcagggc aaattcgatt
     4981 tccgccagtg ggcgcgcaat cagtgacggg gacagggttt gggaaacgcg caacgccaaa
     5041 tccacgcctt cggcaatcaa atcgacgtgg cggttgtcca aaatcagttc taatgtcact
     5101 tcgggataac gttcgcggta ttccgccagc cagttgcata tctggctgcc ggcaaaccac
     5161 agtggcatcg ttacgcgcag cagcccctgc ggtttttccg tccccccggc ggctttttgc
     5221 gcggcatcgt cgagcgtgtc gagcgcgtaa ctgcattgcc ggtagtattc ttccccggct
     5281 tcggtcaggc tgaggttgcg gctgttgcgg tgcaggagtt tggcttggac ggtgttttcc
     5341 aagtggctga cgtgtttgct tgccattgcg gtggagatgc cgagcgcgtc ggcggcgcgg
     5401 gtgaagccgc cgctttggac gacttggcgg aaaaccttga ggctgaacag ggtgtccata
     5461 ttttcttgtg tggaaaagtt gtatcaataa aagcagtata tatttgaaaa ggggaaacat
     5521 ctatactcta ccgcctgaaa tgaagacaaa tatcaaagga gcttttatgt ccgattgctg
     5581 caaccgtatc caaccggttt tgctttctgt tttgcgtatc gtaaccgcct acctgttttt
     5641 gttgcacggt acgtcgaaaa tcttcgcctt ccccattgaa atgggcagcg gttcgcccgg
     5701 cgggctgttg ctgcttgccg gtattttaga aattgtcggc ggcattttgc tggtgttggg
     5761 cctgtttgcg cgccctgccg cgtttgtttt gtccggccag atggcggttg cctattttat
     5821 ggcgcacgct tccggaaatg ctttgttccc gattgccaac ggcggcgagt ccgcagtgct
     5881 gttctgcttc gtattcctct atatcgcggc ggcgggcggc ggagcatggt cgctggacag
     5941 gctgtttttc aagcgtaaag cctgaatcgg actgcctaaa gtgtattttg ttgaatgttt
     6001 ttgaggaaaa gaaatgaccc gtcaatctct gcaacaggct gccgaaagcc gccgttccat
     6061 ttattcgtta aataaaaatc tgcccgtcgg caaagatgaa gttgtccaaa tcgtcgaaca
     6121 cgccgttttg cacacacctt cttcgttcaa ttcccaatct gcccgcgtgg tcgtgctgtt
     6181 tggcgaagag catgataagg tgtggcaatt tgtcgaagac gcgctgcgtg ccgccgtgcc
     6241 tgccgacagt tttgaaccga ccgcgcaaaa attgaacctg tttaaggcgg gtgcggcaac
     6301 cattttgttt tatgaagatc aaaatgtcgt caaaggtttg caggagcagt tccctgctta
     6361 tgccgccaac tttcccgttt gggcggacca ggcgaacgcg atggtgcagt atgccgtttg
     6421 gacgacactt gccgcggtcg gcgtaggtgc aaacctgcaa cattacaatc ccttgcccga
     6481 tgcggcgatt gccaaagcgt ggaatatccc cgaaaactgg ttgttgcgcg cgcaaatggt
     6541 tatcggcggt attgaagggg cggcaggtga aaagaccttt gaaccagttg cagaacgttt
     6601 gaaagtgttc ggcgcataat ttcgcggtca aaaaaatgcc gtctgaaccc tgttcagacg
     6661 gcatttttca gtatcaggcg gcgagttttc cgcattctga gacctttgtt tacaaatatc
     6721 atgttcaata tagttaaaag aaattattct catttcctcc gtgaggcaat ataattcggt
     6781 tgttttgtta aattgagtat aaaaatgaaa atatcatttc atttagcttt attacccacg
     6841 ctgattattg cttccttccc tgttgctgcc gccgatacgc aggacaatgg tgaacattac
     6901 accgccacgc tacctaccgt ttccgtggtc ggacagtccg acaccagcgt actcaaaggc
     6961 tacatcaact acgacgaagc cgccgttacc cgcaacggac agctcatcaa agaaacgccg
     7021 caaaccatcg atacgctcaa tatccagaaa aacaaaaatt acggcacgaa cgatttgagt
     7081 tccatcctcg aaggcaatgc cggcatcgac gctgcctacg atatgcgcgg tgaaagcatt
     7141 ttcctgcgcg gttttcaagc cgacgcatcc gatatttacc gcgacggcgt gcgcgaaagc
     7201 ggacaagtgc gccgcagtac tgccaacatc gagcgcgtgg aaatcctgaa aggcccgtct
     7261 tccgtgcttt acggccgcac caacggcggc ggcgtcatca acatggtcag caaatacgcc
     7321 aacttcaaac aaagccgcaa catcggtgcg gtttacggtt cgtgggcaaa ccgcagcctg
     7381 aatatggaca ttaacgaagt gctgaacaaa aacgtcgcca tccgtcttac cggcgaagtc
     7441 gggcgcgcca attcgttccg cagcggcata gacagcaaaa atgtcatggt ttcgcccagt
     7501 attaccgtca aactcgacaa cggcttgaag tggacggggc aatacaccta cgacaatgtg
     7561 gagcgcacgc ccgaccgcag tccgaccaag tccgtgtacg accgcttcgg actgccttac
     7621 cgcatggggt tcgcccaccg gaacgatttt gtcaaagaca agctgcaagt ttggcgttcc
     7681 gaccttgaat acgccttcaa cgacaaatgg cgtgcccaat ggcagctcgc ccaccgcacg
     7741 gcggcgcagg attttgatca tttctatgca ggcagcgaaa acggcagcct aattaaacgc
     7801 aactacgctt ggcagcagac cgacaacaaa accctgtcgt ccaacttcac gctcaacggc
     7861 gactacacca tcggccgttt tgaaaaccat ctgaccgtag gcctggatta cagccgcgaa
     7921 caccgcaacc cgacattagg ttacaaccgc ccctttaccg cctccatcaa cccctacgac
     7981 cgcgcaagct ggccggcttc gggcaggctg caacccgtct tcacccaaaa ccgccacaaa
     8041 gccgactcct acggcatttt cgtgcaaaac atcttctccg ccacgcccga cttgaaattc
     8101 gtcctcggcg gtcgttacga caaatacacc tttaattccg aaaacaaact caccggcaac
     8161 agccgccagt acagcggcca ctcgttcagc cccaacatcg gcgcagtgtg gaacatcaac
     8221 cccgttcaca cactttacgc ctcgtataac aaaggtttcg cgccttatgg cggacgcggc
     8281 ggctatttga gcatcgatac gtcatcttct gccgtgttta acgccgaccc cgagtacacc
     8341 cgccaatacg aaaccggcgt caaaagcagt tggctggaca atcgtttgga caccacattg
     8401 tccgcctacc aaatcgaacg cttcaatatc cgctaccgcc ccgacgcgga aaataatccc
     8461 tacacttggg cagtcggcgg caaacaccgt tcgcgtggcg tggaattgtc cgccatcggg
     8521 caaatcatcc ccaaaaaact ctatctgcgc ggttcgttgg gcgtgatgca ggcgaaagtc
     8581 gttgaagaca aaaaaaatcc cgaccgagtg ggcatccatt tgaataatac cagcaacgtt
     8641 accggcaacc tgtttttccg ttatacaccg accgaaaacc tctacggcga aatcggcgta
     8701 accggtacag gcaaacgcta cggttacaac tcaagaaata aagaagtgac tacgcttcca
     8761 ggctttgccc gagttgatgc catgcttggc tggaaccata aaaatgttaa cgttaccttt
     8821 gccgcagcca atctgttcaa tcaaaaatat tggcgttcgg actctatgcc gggtaatccg
     8881 cgcggctata ctgcccgggt aaattaccgt ttctgatgaa atcaggcaaa ggccgtctga
     8941 aaatcctgat aatccgtaaa ttcagcatac gaactttttg acaggcttta tctacatcag
     9001 tataatccaa aaagaaatag cgcccttggc agtacgcatt acccattaaa tcatagcggg
     9061 tatgccgatc ccaagggctt ttttatatct ttgacaaata taggggaagc aatatgaaaa
     9121 ccgccatttt gattgacggt gcatttttta ttaagcgggt acggtcatta ggcctgtctc
     9181 aaaatccaca cgatgcaaaa agaattgctg atttggcttt ccgatattcg atgctgcatc
     9241 tgaaagataa aatcaacggc acagatcaaa tggatgattt atatagaatt ttcttttacg
     9301 actgcgtgcc gtttgaaaag aaaatgcaca atcccgtatc tcatcgtgcc atagattttt
     9361 caaagactcc ggaagccata tttcgttgca atctgcatac cgaattgaag aagaagcgta
     9421 aattagcgtt acgtttaggc aagctgtcgg acaatacagc atggatatta aaaccccaag
     9481 tcatgaaaaa tcttctgaaa aacccgtcaa ctcaaattac ggaaaacgat gtcgtgctcg
     9541 atgttaaaca aaaaggtgta gatatgcgta taggcttgga tatttcatct attaccttaa
     9601 aaaaacaagc cgataaaatc atcttgtttt ctggtgattc cgattttgtc ccagcagcca
     9661 aattagccag acgggaaggt atcgatttta ttcttgatcc tatgtggaat catgtcccac
     9721 ctgacttaat ggaacacatc gacggattga agacaaaatg tccgaaaccg taaattacta
     9781 gaacaaaggc cgtctgaaaa taaggctaat tatctaagcc atatttcaga cggcctttat
     9841 aaaggctgaa ataaaactaa acacattttt tcactcaaat cgaacacgcc ttcaataaaa
     9901 tgccataaaa tccgcacatt aatctgacac acaagagata cctatgaaac tgaaaacctt
     9961 agctttgact tcattgaccc tgttggcatt ggccgcttgt agcaaacagg ctgaaaccag
    10021 tgttccggca gacagcgccc aaagcagctc atctgctccg gcagcccctg ctgagttgaa
    10081 cgaaggtgtg aactacactg tattgtctac gcctattccg caacagcagg ccggtaaaat
    10141 cgaagtattg gaatttttcg gctacttctg cccgcattgc gcccatcttg agccggtctt
    10201 gagcgagcac atcaaaacgt ttaaagacga tacctatatg cgccgggagc atgtcgtgtg
    10261 gggtgatgaa atgaaacctt tggcacgttt ggcggccgca gtggaaatgg ccggtgaatc
    10321 agataaagcc aacagccata ttttcgatgc gatggttaat caaaaaatca atctggccga
    10381 taccgatacc ctgaaaaaat ggctgtccga gcaaacagcg tttgacggca aaaaagtatt
    10441 ggctgcattt gaggctcctg aaagccaagc gcgtgcggct caaatggaag agttgaccaa
    10501 taaattccaa atcagcggca caccgactgt gattgtcggc ggcaaatacc aagttgaatt
    10561 taaagactgg cagtccggta tgaccacgat tgaccagttg gtggataaag tacgcgaaga
    10621 gcagaaaaag ccgcaataag ttgaggattg aatgagtaaa ggccatctga aaataggatt
    10681 tcagacggcc ttttgtattt aggctttata gaagagatga ttgcttaaag ccttatggtt
    10741 ttaaatcaga atatatagcg gattaacaaa aaccagtac
//
LOCUS       DAWKJW010000053        10088 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.053, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000053 DAWKJW010000000
VERSION     DAWKJW010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10088
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.053"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            73..582
                     /locus_tag="WJJ54_000984"
     CDS             73..582
                     /locus_tag="WJJ54_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HEZ7341865.1"
                     /translation="MKKKLLSGIKFAVQTALVFLLVSLFLDWIRKPEEPAGAAGRPLT
                     LLSGQRLTLGQFSRDKAILVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSAS
                     EVAAYMAKRGLGFPTVNDEDGGLARSWRIVATPAVVLVKNGKMVHYTTGISSYWGLRA
                     RIFQADVFG"
     gene            925..1365
                     /gene="nadR"
                     /locus_tag="WJJ54_000985"
     CDS             925..1365
                     /gene="nadR"
                     /locus_tag="WJJ54_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family adhesin repressor NadR"
                     /protein_id="HEZ7341866.1"
                     /translation="MPTQSKHASINISLIQAREALMTQFRPILNQANITDQQWRIIRL
                     LAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVFLKLTAEGEK
                     LYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS"
     gene            1480..1980
                     /gene="hpaC"
                     /locus_tag="WJJ54_000986"
     CDS             1480..1980
                     /gene="hpaC"
                     /locus_tag="WJJ54_000986"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HEZ7341867.1"
                     /translation="MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVAP
                     VTDEPPTVMLCINRSARIIPILSENGSLCINTLADEHQDVAEHFAGLTNLSPEERFAY
                     HIWHYGKTGQPEIEGALAHLHGHIVGQHEIGTHFVFYVRLDEIKNCVGKRPALLYFRR
                     QFRSLD"
     gene            1998..2693
                     /locus_tag="WJJ54_000987"
     CDS             1998..2693
                     /locus_tag="WJJ54_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEZ7341868.1"
                     /translation="MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQA
                     GFTEIVINHAWLGRQIEEALGDGSAYGVNIAYSPEPEGGLETAGGIARALPLLGDAPF
                     LVVNGDVLTDIDFTAAFQAASSLPEHISAHLWLVENPPHHPDGDFSLLPDGSVRPEVN
                     GGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLRNEMRQNRVSGQKHTGLWLDVGTVC
                     RLKEAQALAGAWK"
     gene            complement(2924..3355)
                     /locus_tag="WJJ54_000988"
     CDS             complement(2924..3355)
                     /locus_tag="WJJ54_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEZ7341869.1"
                     /translation="MGSNAWLFWALASAGFASLTAVFAKMGLQGIDSDFATFIRTLVI
                     LAALVLFLTYTGKWQGVNGFTGHNWTFLILSGLATGASWLAYFKALQLGNASQVAPVD
                     KFSLVLVALMAVVFLDERPNTQEWIGLGLVTAGVLVLALKR"
     gene            3530..5206
                     /locus_tag="WJJ54_000989"
     CDS             3530..5206
                     /locus_tag="WJJ54_000989"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEZ7341870.1"
                     /translation="MSFKTDAEIAQSSTMRPIGEIAAKLGLNADNIEPYGHYKAKINP
                     AEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPV
                     FGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPK
                     RVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKE
                     RLGNILVAYAKDGSPVYAKDLKANGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANI
                     AHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRA
                     LKYNGGVERANLGEENLDALEKGLPNLLKHISNLKNVFGLPVVVALNRFVSDSDAELA
                     MIEKACAEHGVEVSLTEVWGKGGAGGADLARKVVNAIESQTNNFGFAYDVELGIKDKI
                     RAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGF
                     RIAVRGITVSAGAGFIVALCGNMMKMPGLPKVPAAEKIDVDEHGVIHGLF"
     gene            5320..6411
                     /gene="ychF"
                     /locus_tag="WJJ54_000990"
     CDS             5320..6411
                     /gene="ychF"
                     /locus_tag="WJJ54_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEZ7341871.1"
                     /translation="MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIV
                     EVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVN
                     VVRCFDDDNIVHVAGRVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQK
                     LVELCKKLLPHLDEGKPVRSFGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPH
                     LDRLKELAAKENAPVVAVCAAMESEIAELEDGEKAEFLAEMGLEEPGLNRLIRAGYDL
                     LGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEA
                     KAKEAGKMRVEGKEYVVQDGDVMHFLFNV"
     gene            6729..6833
                     /locus_tag="WJJ54_000991"
                     /pseudo
     CDS             6729..6833
                     /locus_tag="WJJ54_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            6844..7041
                     /locus_tag="WJJ54_000992"
     CDS             6844..7041
                     /locus_tag="WJJ54_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ7341872.1"
                     /translation="MSQALPYRPDIDTLRAAAVLSVIVFHIEKNWLPGGFLGVDIFFV
                     ISGFLMTAILLREMSGGGGFP"
     gene            7038..8720
                     /locus_tag="WJJ54_000993"
     CDS             7038..8720
                     /locus_tag="WJJ54_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ7341873.1"
                     /translation="MKAFYIRRIKRILPAFFAVLAATLIGGFFLFTKDDFFLLWKSAL
                     TALGFASNLYFARGKDYFAPAQEEKPLLHIWSLSVEEQFYFVFPILLLLVVRKSLRVQ
                     AGFLAALCALSLATSFIPSALDKYYLPHLRACEMLVGSLTAVRMRYRQQRNLAVGKRY
                     AAVGALFSACILSACLFAYSEQTAYFPGPAALIPCLAVAALIYFNHYEHPLKKFFQWK
                     ITVAAGLISYSLYLWHWPILAFMRYIGPDNLPPYSPAAAIVLTLAFSLISYHCIEKPF
                     KKWKGSFAQSVLWIYALPMLILGAGSFFAMRLPFMAQYDRLGLTRSNTSCHNNTGKQC
                     LWGDTEKQPELLVLGDSHADHYKTFFDAVGKKEKWAATMVSADACAYVEGYASRVFQN
                     WAACRAVYRYAEEHLPRYSKVVLAMRWGSQMPENSRSLAYDAGFFQKFDRMLHKLSSE
                     KQAVYLMADNLASSYNVQRAYILSSRIPGYRQALRPDDESTLKANARIRELAAKYPNV
                     YIIDAAAYIPADFQIGGLPVYSDTDHINPYGGTELAKRFSEKQRFLNTRHNH"
     gene            8782..10077
                     /gene="tyrS"
                     /locus_tag="WJJ54_000994"
     CDS             8782..10077
                     /gene="tyrS"
                     /locus_tag="WJJ54_000994"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEZ7341874.1"
                     /translation="MSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSL
                     HIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIR
                     NQLTPFLSFEGGNAAIMANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRD
                     GAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFG
                     LTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSI
                     EEIDAVEAKDQASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSSLTES
                     DFEQLALDGLPAFEVSDGINVVEALVKTGLASSNKEARGFVNSKAVLLNGKPAEANNP
                     NHAAERPDDACLLNGEHKRFGKYTILRRGKRNHALLVWK"
BASE COUNT         2352 a         2722 c         2704 g         2310 t
ORIGIN      
        1 cggaagccaa gttttgagac ttggcttttt gtttgcctgc cggttgcgcg ggcgtaccgt
       61 ttgagagagc gtatgaaaaa gaaactgctt tcgggcatca aatttgccgt tcagacggca
      121 ttggtgtttt tattggtgtc gctgtttttg gattggatac gcaagcccga agagccggcc
      181 ggtgcggcag ggcggccttt gaccctgctg tcggggcagc ggctgacttt gggacagttt
      241 agccgggata aggcgatttt ggtgtatttt tggggaagct ggtgcggcgt gtgccgttat
      301 cagtcgccga taatcgatga tttggcggcg gacggcgttc cggtcgtcgg cgtggcggta
      361 cgttccggca gcgcgtccga agtggcggcg tatatggcaa agcggggctt gggctttccg
      421 acggtcaacg atgaggacgg gggtttggca aggtcttggc ggattgtcgc aacgcctgcc
      481 gtcgttttgg tcaaaaatgg gaaaatggtt cactatacga cgggaatcag cagttattgg
      541 ggcttgcgcg cacgaatttt tcaggcggat gttttcggtt aacttttgtt tttgttaaac
      601 tttacgctat gtagagaatc aaacggcata taccttgctc gtctgatgcg gcggcttttg
      661 ttttttctgg aagaaagttc tttcgacagt aaatgtaata ctttgttgag attgtaggga
      721 aaatagacta agatataact attaaaatat ttttagatag gattatcgga attaaagtct
      781 tttataccca gtcgtccgat gcggtttata gcgtattgtt gctatatgtt cgttttgtta
      841 tataacggtt gcatcaaaaa ttacgcccac aggctttccc gacggtttga aagtttgatt
      901 ttcgataact tggagacttg aacaatgcct acccaatcaa aacatgcgtc tatcaatatc
      961 agtctgatac aggcaaggga agccctgatg acccaattca ggcctattct gaatcaggcg
     1021 aatattaccg atcagcaatg gcggattatc cgtcttttgg cggaaaacgg cacgctggac
     1081 tttcaagatt tggcgaatca ggcgtgcatt ttgcgcccca gcctgaccgg tatcctgacc
     1141 cgccttgaaa aagcgggttt ggttgtccgc ctgaaacctt ccaacgacca acgacgtgtt
     1201 tttctgaagc tgactgccga gggcgagaag ctgtatgagg aaatcggcga agaagtggac
     1261 gagcgttacg acgctatcga ggaagtgctg ggccgcgaga aaatgctgct gcttaaagac
     1321 ctgttggcag aacttgccaa aatcgaggat gcgttgaact cgtaatacgc cgtaacgcgc
     1381 ggaaatgtcc gaccgacggc tttttgaatc agaactgctg cacatggggg gtgccttgtg
     1441 tgcagcattc ttatataggg gacagtttaa aggggaaaaa tggcggattt gcagaaaact
     1501 tttcaaactt cgttccgtga tgcgatggca tcttgcgcgg caggcgttca tgtcatcacg
     1561 acagacggtg cggcagggcg ttacggcatt acaatgacgg cggtcgcgcc ggttaccgac
     1621 gagccgccga ccgtgatgct gtgcatcaac cggagtgcgc gaatcattcc gatcctgtcg
     1681 gaaaacggca gcctgtgcat caatacgttg gcagacgaac atcaggatgt ggccgaacat
     1741 tttgccggat tgaccaatct ttcacccgaa gaacgttttg cctatcatat ttggcattac
     1801 ggtaaaaccg gacaacctga aatagaaggc gcgttggcgc atctgcacgg gcatattgtc
     1861 ggccaacatg aaatcggcac acattttgtg ttttacgtca ggctcgacga aattaaaaat
     1921 tgcgtgggca aacgtcccgc gctgctttat ttcagacggc agtttagatc tttagactga
     1981 tattcggaca gatatatatg aaagcgatga tactggcggc aggacgcggc gagcgtatgc
     2041 gccctttgac cgataccact ccgaagccgc tgctcgatgt ggcgggtaag cctctaatcg
     2101 gttggcacct atgccgtctg aagcaggcag ggtttaccga aatcgtcatc aaccacgctt
     2161 ggctgggtcg gcagatagaa gaggctttgg gcgacggctc ggcttatggc gtgaacatcg
     2221 cctattcgcc cgaacctgaa ggcggcttgg aaaccgcagg cggtatcgca cgggcattgc
     2281 cgctgttggg cgatgccccg tttttggtgg tcaacggcga cgtgttgacc gacatcgatt
     2341 ttaccgccgc gtttcaggcg gcatcgtccc tgcccgagca catttccgcc catctgtggc
     2401 tggtggaaaa tcccccgcac catcctgacg gcgatttttc cctgctgccc gacggcagcg
     2461 tgcggccgga agtaaatggc ggcaacggat tgacatttag cggcgtgggt atttaccgtc
     2521 ctgaaatgtt tgacggaatc gaagcgggca gtgtggcgaa actcgcgccc gtattgcgga
     2581 acgaaatgcg gcaaaaccgc gtgagcggtc agaagcatac gggcttgtgg ctggatgtcg
     2641 gcacggtatg ccgtctgaaa gaggctcaag cccttgcagg ggcttggaag tgaaataaaa
     2701 cggtggcttg ccgagccggc tgccgaacgg ttccgaccgg atgtccggca tattttcgtg
     2761 gaggcgtgaa aatagggcgt tcggggcttt ccgtccaaca aatgccatct gaagcgcggc
     2821 ggtttgccgt cggcgcggtg tcggatttta ttgggtaact ttgttcagac cgccgcccgt
     2881 cagattgtca aaacccggtt tcaggcggta tggcggattc ggtttaacgt ttcaacgcca
     2941 gcaccaacac gcccgccgtt accagcccca agcctatcca ttcctgcgtg ttcgggcgtt
     3001 cgtccaagaa aaccaccgcc atcagcgcga ccagaaccag gctgaattta tcgacggggg
     3061 cgacttgcga ggcgttaccc agttgcaggg ctttgaagta ggcaagccaa gatgcgccgg
     3121 tagcaaggcc ggataggata aggaatgtcc agttgtgccc cgtaaagccg ttcacgccct
     3181 gccatttgcc ggtgtaggtc aaaaacagta ccaaagcggc gaggatgacc aaggtgcgga
     3241 tgaaggtagc gaaatctgaa tctataccct gcaagcccat tttggcgaaa acggcggtca
     3301 atgaggcgaa gcctgccgat gccaatgccc aaaacagcca tgcgttgctg cccatgtttt
     3361 ctccttggat tgtgaacaat atgaacggta tttttgttgc agcgtcaaaa atttcactgc
     3421 gggtttggtg cggataacgt tataatatgc ctgatattat tttcaatcca cctgtttgtc
     3481 gcctgatgct ttcagacggt atgtccctcc tcatttctaa aggaaaatca tgagcttcaa
     3541 aaccgatgcc gaaatcgccc agtcttccac catgcgcccg attggcgaaa ttgccgccaa
     3601 gctgggcctg aacgccgaca acattgagcc ttacggtcat tacaaagcca aaatcaatcc
     3661 tgccgaagcg tttaaactgc cgcaaaaaca aggcaggctg attttggtaa ccgccatcaa
     3721 cccgactcct gccggcgaag gcaaaaccac cgtaaccatc ggtttggcgg acgcgttgcg
     3781 ccacatcggc aaagatgccg tgattgccct gcgcgaacct tctttagggc cggtgttcgg
     3841 cgtgaaaggc ggcgcggcag gcggcggcta tgcccaagtt ttgccgatgg aagacatcaa
     3901 cctgcacttt accggagatt ttcacgccat cggtgcggca aataatctgc ttgccgcgat
     3961 gctcgacaac catatctacc aaggcaacga gttgaacatc gaccccaaac gcgtgctgtg
     4021 gcggcgcgtg gtcgatatga acgaccgcca gttgcgcaac atcatcgacg gcatgggcaa
     4081 gcctgttgac ggcgtgatgc gtcctgacgg tttcgatatt accgttgctt ccgaagtgat
     4141 ggcggtattc tgtcttgcca aagacatcag cgatttgaaa gagcgtttgg gcaacatcct
     4201 tgtcgcctac gccaaagacg gcagccccgt ttacgccaaa gatttgaaag cgaatggcgc
     4261 gatggcggca ttgcttaaag atgcgattaa gcccaacttg gtgcaaacca tcgaaggcac
     4321 gcccgccttc gtacacggcg gcccgttcgc caacatcgcc cacggctgca actccgtaac
     4381 cgcaacccgt ctggcgaaac accttgccga ttacgccgta accgaagcag gcttcggcgc
     4441 ggacttgggc gcggaaaaat tctgcgacat caaatgccgc cttgccggtt tgaaacctga
     4501 tgcggctgtt gtcgtggcga ctgtccgcgc gttgaaatat aacggcggcg tggaacgcgc
     4561 caacctcggc gaagaaaatt tagacgcttt ggaaaaaggt ttgcccaacc tgctgaaaca
     4621 catttccaac ctgaaaaacg tattcggact gcccgtcgtc gttgcgctca accgcttcgt
     4681 gtccgactcc gatgccgagt tggcgatgat tgaaaaagcc tgtgccgaac acggcgttga
     4741 agtttccctg accgaagtgt ggggcaaagg tggtgcgggc ggcgcggatt tggcgcgcaa
     4801 agtcgtcaac gccattgaaa gtcaaaccaa taacttcggt ttcgcctacg atgtcgagtt
     4861 gggcatcaaa gacaaaatcc gtgcgattgc ccaaaaagtg tacggcgcgg aagatgttga
     4921 tttcagcgcg gaagcgtctg ccgaaatcgc ttcactggaa aaactgggct tggacaaaat
     4981 gccgatctgc atggcgaaaa cccaatactc tttgagtgac aacgccaaac tgttgggctg
     5041 ccccgaaggc ttccgcatcg ccgtgcgcgg catcaccgtt tccgccggcg cgggcttcat
     5101 cgtcgcgctg tgcggcaata tgatgaagat gccgggtctg ccgaaagttc cggccgccga
     5161 gaaaatcgat gtggacgaac acggcgtgat tcacggcttg ttctgaacgg tttttgaaac
     5221 cagatgccgt ctgaagccgt ttcagacggc attttttcgg aacgcgggcg gcggtatgct
     5281 ataatccgcc gttaaatttc tctattttca ggaaaaaaca tgagtttgaa atgcggcatc
     5341 gtcggtttgc ccaacgtcgg caaatccacc ctttttaacg cgctgaccca atcgggcatc
     5401 gaagcggcaa actatccttt ctgtaccatc gaacccaacg tcggcatcgt cgaagtaccc
     5461 gatccgcgta tggccgaatt ggcaaaaatc gtcaatccgc aaaaaatgca gcctgccatc
     5521 gtcgaatttg tcgatattgc cggtttggtc gcgggcgcga gcaaaggcga gggcttgggc
     5581 aaccagttcc ttgccaacat ccgcgaaacc gacgcgattg tgaatgtcgt gcgctgcttt
     5641 gacgacgaca atatcgtcca cgttgcaggc cgcgtcgatc cgattgccga catcgaaacc
     5701 atcggtacag agttggcgct tgccgacctg gcaagtgtcg aaaaagccat cgtccgcgaa
     5761 gaaaaacgcg cccgctccgg cgacaaagac gcgcaaaaac tggtcgaact gtgcaaaaaa
     5821 ctgctgccgc atttggacga aggcaaaccc gtgcgttcct tcggtttgga cgcggaagaa
     5881 cgcgcgatgc tcaaaccgct gttcctgctg accgccaagc cggcgatgta tgtgggcaac
     5941 gttgccgaag acggttttga aaacaatccg cacctcgacc gcctgaaaga attggcggca
     6001 aaagaaaacg cccccgtcgt cgccgtgtgc gccgcgatgg agagcgaaat cgccgagttg
     6061 gaagacggtg aaaaagccga gttcctcgcc gaaatgggct tggaagaacc gggcctgaac
     6121 cgcctgattc gtgccggtta cgacctcttg gggctgcaaa cctatttcac cgccggtgtg
     6181 aaagaagtcc gtgcgtggac gatacacaaa ggcgacaccg cgcctcaagc tgccggcgta
     6241 atccataccg acttcgaacg cggcttcatc cgcgcccaag tgattgccta cgatgatttt
     6301 gtctcgctcg gcggcgaagc caaagccaaa gaagccggca aaatgcgtgt ggaaggcaag
     6361 gaatacgtcg tgcaggatgg ggatgtgatg cactttttgt ttaacgtgta acccaaatgc
     6421 ggcaggtttt cagacggctt tgccggaaat gccgtctgaa gccggttttg gtggttttcg
     6481 gcgtttccat accgccggaa tgcagccgta tcaaaatata gcggattaac aaaaatcagg
     6541 acaaggcggg gcaacgctgt accggttttt gttaatccac tataaaatcc cacccgcatt
     6601 tccgatttgc cctccccgat tcctgcaaaa caaaccgcct gccccgctgt tgcaaaaagc
     6661 cgtccggcat tccgaatatc ccgtacaaaa tgacctttca gacggcattt gcgccgccgc
     6721 gtttcgagta tagtggatta actttaaatc aggacaaggc gacgaaaccg cagacagtac
     6781 agatagtacg gcaaggcgag gcaacgccgt actggtttaa atttaatcca ctataaaaac
     6841 attatgagcc aagccttacc ctaccgcccg gacatcgaca cattgcgcgc cgccgccgtc
     6901 ttgtccgtca tcgtgttcca tatcgaaaaa aattggctgc cgggcggatt tctcggtgtc
     6961 gatatattct ttgtgatttc aggctttttg atgacggcga tcctccttcg cgaaatgtcg
     7021 ggggggggag gttttccctg aaggcatttt atatccgccg catcaaacgg attttgcccg
     7081 catttttcgc cgtattggcg gcaacgctga taggcggctt ctttttattc accaaagatg
     7141 atttctttct tttatggaaa tccgcgctga ccgccttggg tttcgcatcc aacctgtatt
     7201 ttgcaagggg caaggactat ttcgctcccg cgcaggaaga aaagcccctg ctgcacattt
     7261 ggtctttgtc ggtcgaagaa caattttact ttgtctttcc gatattgctg ttgcttgtcg
     7321 tccgcaaaag cctgcgcgtc caagccggct tcctcgccgc actgtgcgcg ttaagccttg
     7381 ccacttcctt tataccttcc gcgctcgata aatattacct gccccacctg cgcgcctgcg
     7441 aaatgctggt cggatcgctg accgccgtgc ggatgcggta ccggcaacag cggaatctcg
     7501 ccgtcgggaa acggtatgcc gccgtcggcg cattgttttc cgcgtgcata ctgtccgcct
     7561 gcctgtttgc ctattcggaa caaaccgcct atttcccggg ccccgccgct ttgattccct
     7621 gtctggctgt tgccgcgctg atttatttca accattacga acacccgctt aaaaaatttt
     7681 tccaatggaa aatcaccgtt gccgccggtt tgatttccta ttcgctttat ctgtggcatt
     7741 ggccgatatt ggcctttatg cgctatatcg gcccggacaa cctgccgcct tattcgccgg
     7801 cggcagcgat cgtcctgact ctagcgtttt ccctgatttc ttatcactgc atcgaaaagc
     7861 cgtttaaaaa atggaaaggt tcgttcgcac aatccgtttt atggatttat gccttgccta
     7921 tgctcatttt gggggcgggc tcgtttttcg cgatgaggct gccgtttatg gcgcaatacg
     7981 accgcttggg gctgacgcgt tccaacacct cctgccacaa caataccggc aaacaatgcc
     8041 tatgggggga tacggaaaaa cagccggaac tgctggtttt gggcgactcc cacgccgacc
     8101 attacaaaac attcttcgat gccgtgggca aaaaagaaaa atgggctgcc actatggttt
     8161 ccgccgacgc ttgcgcctat gtggaaggct acgcgtcccg cgtattccaa aactgggccg
     8221 cctgccgcgc cgtttaccgc tatgccgaag aacacctgcc ccggtattca aaagtggttt
     8281 tggcgatgcg ctggggcagc caaatgcccg aaaacagccg ctcccttgcc tatgatgccg
     8341 gttttttcca aaaattcgac cgtatgctgc acaaactctc atccgaaaaa caagccgttt
     8401 acctgatggc ggacaacttg gcctcgtctt acaacgtcca gcgcgcctat atcttgtctt
     8461 cccgcatacc gggttaccgc caagccctgc gcccggacga cgaaagcacc ctgaaagcca
     8521 atgcacgcat cagggaattg gcagccaaat accccaacgt ctatattatt gatgccgccg
     8581 cctatatccc cgcagatttt caaatcggcg gattgccggt ttactcggac acagaccaca
     8641 tcaaccctta cggcggcacg gaattggcaa agcgtttttc cgaaaaacaa cggtttctca
     8701 atacgcgcca taaccattga ttcgcttaaa tttgttacaa tcggcggttt gcaaaaacgc
     8761 taattttttt gaaagagacc gatgagcgtc atccaagacc tgcaatcgcg cggcctaatc
     8821 gcgcaaacga ccgacatcga agccttagac gctttgttga acgaacaaaa aatcgccctt
     8881 tactgcggtt tcgatccgac cgccgacagc ctgcacatcg gacacctgtt gcccgtattg
     8941 gcattgcgcc gcttccaaca ggcggggcat acgccgattg ctttggtggg cggcgcgacc
     9001 ggtatgatcg gcgaccccag cttcaaagcc gccgaacgca gcttgaattc cgccgaaact
     9061 gttgccggct gggtggaaag tatccgcaac caattaaccc ctttcttgag ctttgaaggc
     9121 ggaaatgccg ccattatggc gaacaatgcc gactggttcg gcagcatgaa ctgccttgac
     9181 ttcctgcgcg acatcggcaa gcatttctcc gtcaacgcca tgctgaacaa agaatccgtc
     9241 aaacagcgca tcgaccgcga cggcgcaggc atttccttca ccgagttcgc ctactccctg
     9301 ctgcaaggct acgactttgc cgagttgaac aaacgccacg gcgcggtttt ggaaatcggc
     9361 ggctccgacc aatggggcaa catcaccgcc ggtatcgacc tgacccgccg cctgaatcaa
     9421 aaacaagtgt tcggcctgac cctgcctttg gttaccaaat cagacggcac caaattcggc
     9481 aaaaccgaag gcggcgcagt atggctgaac gcgaaaaaaa cctcgcccta tcagttctac
     9541 caattctggc tgaaagtcgc cgatgccgat gtgtataaat tcctgaaata ctttaccttc
     9601 ctgtccatcg aagaaatcga tgccgtcgaa gccaaagacc aggcaagcgg cagcaagccc
     9661 gaagcgcaac gcatcctcgc cgaagaaatg acccgcctga ttcacggcga agaagccctt
     9721 gccgccgcgc agcgcatttc cgaaagcctg tttgccgaag accaaagcag cctgaccgaa
     9781 agcgacttcg agcagctcgc cctcgacggc ctgcctgcat ttgaagtttc agacggcatc
     9841 aatgtcgtcg aagccttggt caaaaccggt ttggcatcct ccaataaaga agcgcgcggc
     9901 tttgtgaaca gcaaagcggt tttgctcaac ggcaaacctg ccgaagccaa caaccccaac
     9961 cacgccgccg aacgccccga cgatgcctgc ctgctgaacg gcgaacacaa acgtttcggc
    10021 aaatacacca tccttcggcg cggcaaacgc aaccacgcgc ttttggtttg gaaataatcc
    10081 gattgccg
//
LOCUS       DAWKJW010000054         9983 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.054, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000054 DAWKJW010000000
VERSION     DAWKJW010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9983)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9983)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9983
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.054"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            504..1805
                     /gene="bioA"
                     /locus_tag="WJJ54_000995"
     CDS             504..1805
                     /gene="bioA"
                     /locus_tag="WJJ54_000995"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HEZ7341875.1"
                     /translation="MPSEHQHTSSLLDFDRTHLLHPYTSMTDPLPVYPVKRAEGVFIE
                     LADGTRLIDGMSSWWCAIHGYNHPVLNQAVETQMKQMSHVMFGGLTHEPAVELGKLLV
                     GILPQGLDRIFYADSGSVSVEVALKMAVQYQQARGLRAKQNMATVRRGYHGDTWNAMS
                     VCDPETGMHHIFGSALPQRYFVDNLTSRFDDEWDEADLQPVRALFEAHHTDIAAFILE
                     PVVQGAGGMYFYHPQYLRGLRDLCDEFDIVLIFDEIATGFGRTGKMFACEHAEVVPDI
                     MCIGKGLSGGYMTLAAAITSQKVTETISRGEAGVFMHGPTFMANPLACAVACASVKLL
                     LSQDWQANIRRIESILKCRLKTAWDIRGVKDVRVLGAIGVIELEKGVDMARFQADCVA
                     QGIWVRPFGRLVYLMPPYIISDGVLTKLADKTVQILKEHSK"
     gene            1802..2449
                     /gene="bioD"
                     /locus_tag="WJJ54_000996"
     CDS             1802..2449
                     /gene="bioD"
                     /locus_tag="WJJ54_000996"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HEZ7341876.1"
                     /translation="MKGVYFVSGIDTDIGKTVATGMLAKQLLQQGKSVITQKPVQTGC
                     QDIAEDIAVHRKIMGIPMQEADEQRLTMPEIFSYPASPHLAARLDGRDLDLDKIRTAT
                     QELAAQYEVVLVEGAGGLMVPLTENLLTIDYIRQQGYPVILVTSGRLGSINHTLLSFA
                     ALKQYGIRLYSLVFNHIHDSRDAHIAQDSLNYLKCRLKADFSEAEWMELAKTDAV"
     gene            2464..2940
                     /locus_tag="WJJ54_000997"
     CDS             2464..2940
                     /locus_tag="WJJ54_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HEZ7341877.1"
                     /translation="MEHLFGKWLPDLPAAVSDGIDLPMSRLLKARSLTAALRALPHTF
                     SVELLKLGELETECGGRLVREVLLKLDGIPVVAARSECRIGSAFWQNILDCGTRPLGE
                     RLFQADLEGARSAFEFAVSGEGCGRYFAARRSRFSRHGEEMLLTEYFLPELKRFIG"
     gene            2970..3860
                     /gene="ubiA"
                     /locus_tag="WJJ54_000998"
     CDS             2970..3860
                     /gene="ubiA"
                     /locus_tag="WJJ54_000998"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEZ7341878.1"
                     /translation="MNPKSPLFLRLSDRLDVYLRLMRADKPIGTLLLLWPTYWALWLA
                     SDGIPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVGKKEAL
                     LLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQLYLGLAFSFGIP
                     MAFAAVAGNVPPQAWILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIA
                     AVMLCHGGFTLLMAVLGAVIGAAWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLA
                     NNRIGWVWFTAIFAHTFFAK"
     gene            4045..4494
                     /gene="ptsN"
                     /locus_tag="WJJ54_000999"
     CDS             4045..4494
                     /gene="ptsN"
                     /locus_tag="WJJ54_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HEZ7341879.1"
                     /translation="MSLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADV
                     FECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTREPVGFDAPDGKPVSLIFI
                     LLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEARAILTEE"
     gene            4496..5458
                     /locus_tag="WJJ54_001000"
     CDS             4496..5458
                     /locus_tag="WJJ54_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HEZ7341880.1"
                     /translation="MPSISVRRLFDDNQYKLQLAWAAGNSGADNRIGVEADKPVLALV
                     GHLNFIHPNQIQVVGLAESEYLNRLESGETGYQFGDLFDISMSLVIVANGLPVSPGLR
                     DYCHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGL
                     GKSELALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIF
                     GETSIRPKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNL
                     AVLVEAAVRNYILQLRGKDSTREFLERHQTQLKENEQNHENRPD"
     gene            5439..6293
                     /gene="rapZ"
                     /locus_tag="WJJ54_001001"
     CDS             5439..6293
                     /gene="rapZ"
                     /locus_tag="WJJ54_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEZ7341881.1"
                     /translation="MKIVLISGLSGSGKSVALRQMEDSGYFCVDNLPLEMLPALVSYH
                     IERADETELAVSVDVRSGIDIGQAREQIASLRGLGHRVEVLFVEAEESVLVRRFSETR
                     RGHPLSNQDMTLLESLKKEREWLFPLKEIAYCIDTSKMNAQQLRHAVRQWLKVERTGL
                     LVILESFGFKYGVPNNADFMFDMRSLPNPYYDPELRPYTGMDKPVWDYLDGQPLVQEM
                     VDDIERFVTHWLPRLEDESRSYVTVAIGCTGGQHRSVYIVEKLARRLKGRYELLIRHR
                     QAQNLPSR"
     gene            6374..7315
                     /gene="ylqF"
                     /locus_tag="WJJ54_001002"
     CDS             6374..7315
                     /gene="ylqF"
                     /locus_tag="WJJ54_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HEZ7341882.1"
                     /translation="MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLL
                     AQLSKGKPKLKILNKQDLADPERTKVWLDHYNSRPDTCAIALDSSETGAHGKITQACR
                     AMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADD
                     FWLYDTPGMLWPKIIVEESGYNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQER
                     YQADKDPSSHWDENVWLEWIAKKRGAVLSGGRINYQKAAENILTDFREGKIGRITLET
                     PNQWETWLKKARQKEAELKAIREARKAERKGKKPSEA"
     gene            7416..8018
                     /locus_tag="WJJ54_001003"
     CDS             7416..8018
                     /locus_tag="WJJ54_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEZ7341883.1"
                     /translation="MTDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVL
                     AQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQ
                     QPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLD
                     GLEELPPLTELGELVLPDLMEMPPTDEEEPEAVPSDTLPN"
     gene            8202..9875
                     /gene="recN"
                     /locus_tag="WJJ54_001004"
     CDS             8202..9875
                     /gene="recN"
                     /locus_tag="WJJ54_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEZ7341884.1"
                     /translation="MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGL
                     LLGDKADYSQVRSGAKEAQLSALFDISHLPVLKAELYEQGLLNDGEEELSIRRIIDAK
                     GKSRSFINNQAATLAQLKAVGSQLIDIHGQNAHHSLNQEAAQRELLDAFAGSRAQAET
                     VRQLYQNWANSKKALQEAQEQAENIALEQERLEWQFNELNQLDIKQGEWEALSQSHDS
                     LAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQKLLANLQNIEPRFAESLNMLASIEAE
                     LGEISANMRDVAGRSDINPNELAAQEQRMGELMGMARKYRIEPEELPAKLAEIEERLQ
                     SLQAAADLDALEHNVAHNFAEYQEAAHILSAMRHQAAERLSGETTEHMQHLAMKGARF
                     DIVLLPSSPTAHGLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
                     PTLIFDEVDTGIGGGVAEMVGKALRALGRKHQVLAVTHLPQVASCGENHWRVRKHSEG
                     EQTVSEISILDEIQRVEEVARMLGGEVITDTTRQHAAELLQLASKNSLF"
BASE COUNT         2422 a         2521 c         2731 g         2309 t
ORIGIN      
        1 atagggctgt aaccttcaat cggaatttgt tgcctgcggg atatacggta tgaatgtttg
       61 gtatatatgg gacaggatgg tggaaatcta tcataagtat aagaagccgt gcctggtttt
      121 ggcggtggat tttgtgatgg gtatggtatt catagagccg aatgaggagc cgtgcatcgg
      181 cagatgctat gcgccaatgt cggagtcccc tgattttgcc aacgttgttg cgatggctgt
      241 tgctatgatc tgtatcgtat ggattgccgt tttgtctatg actgattgaa gcgttgggcg
      301 gaggctgcgt gaaacggtat tgggcgttgg gccgtctgat tccaatcggg cttgaggaat
      361 gcgaaacggt gtgcgcttat gttgcggaac gatttgtttc gcggttttgc gcccgaaacg
      421 gatggaaagg tgtgggaagc ggtctgtcgg agtagaatac gcgttttgcg tttgaatgca
      481 gcaataagaa aagagagaaa cttatgccgt ctgaacatca acacacatca tcattgcttg
      541 atttcgaccg tacccatctg ctccatccct atacttccat gaccgatccg cttcccgttt
      601 atcctgtcaa acgtgcagaa ggggtgttta tcgaattggc ggacggcacg cggctgattg
      661 acgggatgtc gtcttggtgg tgtgcgatac acggttacaa tcatcccgtt ttgaatcagg
      721 cggttgagac gcagatgaaa cagatgtcgc atgtgatgtt cggcggtttg acgcatgagc
      781 cggcggtgga gctgggcaaa ttgttggtcg ggattttgcc gcaggggctg gatcgtattt
      841 tttatgcgga ttcgggttcg gtttcggtgg aagtcgcgtt gaagatggcg gtgcaatacc
      901 agcaggcgcg gggtttgcgt gcaaaacaaa atatggcgac ggtgcggcgc gggtatcacg
      961 gcgatacttg gaacgcgatg tccgtctgcg atccggaaac ggggatgcac catattttcg
     1021 gcagcgcgtt gccgcagcgt tattttgtcg ataacctgac aagccgtttc gacgatgaat
     1081 gggacgaggc ggatttgcag cctgtccgcg ccttgtttga agcgcatcat acggacattg
     1141 ccgcctttat tttggaaccg gtcgtgcagg gcgcgggcgg catgtatttt tatcatccgc
     1201 agtatcttcg cggattgcgc gatttgtgcg acgagtttga tatcgttttg atttttgatg
     1261 aaatcgccac cggattcggg cgcacgggca agatgtttgc ctgcgaacac gcggaggtcg
     1321 tgccggatat tatgtgcatc ggcaagggtt tgagcggcgg ctatatgacg ctggcggcag
     1381 caatcacttc gcaaaaagtt accgaaacga tttcgcgcgg cgaagcgggc gtgtttatgc
     1441 acggcccgac gtttatggca aacccgctgg cgtgtgccgt tgcctgcgct tcggtcaaac
     1501 tgcttttgtc tcaagactgg caggcaaata tccgccgcat tgaaagcatc ttaaaatgcc
     1561 gtctgaaaac cgcgtgggac attcgtggtg tgaaagacgt gcgcgttttg ggcgccatcg
     1621 gcgtgatcga gttggaaaaa ggcgtggata tggcgcgttt tcaagcggat tgcgtggcgc
     1681 agggcatttg ggtgcgcccg ttcggcaggt tggtttatct gatgccgcct tacatcattt
     1741 cagacggcgt tttgaccaaa cttgccgaca aaaccgtgca aatcttgaag gaacacagca
     1801 aatgaaaggc gtttacttcg tcagcggcat agacacggac atcggcaaaa ccgtcgccac
     1861 cggtatgttg gcaaaacaat tgttgcagca gggcaaaagc gtgatcacgc aaaagcccgt
     1921 gcaaaccggt tgccaagaca tcgccgaaga catcgccgtt caccgcaaaa tcatgggcat
     1981 acccatgcag gaagccgatg aacagcgtct gaccatgccc gaaatcttca gctatcccgc
     2041 ctcgccccac cttgccgccc gtctggatgg cagggatttg gacttggaca aaatccgtac
     2101 cgccacacaa gaattggcgg cgcagtacga agtcgttttg gtcgaaggcg cgggcggatt
     2161 gatggttccg ctgacggaaa acctgttaac cattgattat atccgtcagc aaggctatcc
     2221 cgtcatcctc gttaccagcg gacggcttgg cagtatcaac cacactttac tcagtttcgc
     2281 agcgctcaaa caatacggca ttcgcttgta cagcctcgtg ttcaaccaca tccacgacag
     2341 ccgcgacgca cacatcgccc aagacagcct gaactacttg aaatgccgtc tgaaagccga
     2401 tttttccgaa gcggaatgga tggagttggc aaaaacagac gcggtataaa gattgggaaa
     2461 aatatggaac acctatttgg gaaatggctg cccgacttgc ccgccgccgt ttcagacggc
     2521 atcgacctgc cgatgagccg gttattgaaa gcccggtcgc tgaccgccgc attgcgcgcc
     2581 ttgccgcata cattttcggt ggaactgctg aaactgggcg aattggagac ggaatgcgga
     2641 gggaggctgg tgcgcgaagt tttgttgaag ctggacggta tccctgttgt cgcggcaagg
     2701 agcgagtgcc gtatcggttc ggcgttttgg caaaacattt tggactgcgg cacgcgtcct
     2761 ttgggcgagc gtctgtttca agccgatttg gaaggggcgc gttcggcgtt tgagtttgcc
     2821 gtttccggcg aaggatgcgg acggtacttt gccgcgcggc gttctcggtt ttcccgtcac
     2881 ggcgaggaaa tgctgctgac cgagtatttt ctgcccgaac tgaaacgctt tatcggataa
     2941 aataccgttt tttcaagctg tgcggcaata tgaatcctaa atccccttta tttttacgac
     3001 tgtccgatcg tttggatgtg tacctgcgcc tgatgcgggc ggacaagccc attgggacgc
     3061 tgcttttgct gtggccgacc tactgggcat tgtggctggc ttcagacggc attcccgatt
     3121 tggcggtatt ggcggcgttt acaatcggca cgtttttaat gcggagtgcc ggttgcgtca
     3181 tcaacgattt tgccgaccgc gattttgacg gtgctgtcga gcgcaccaaa aaccgtccgt
     3241 tcgcacaggg tcgggtcgga aaaaaagaag cgctgctgct gacggcattt ttgtgcctgc
     3301 ttgccgcatt gtgcctgatt ccgctgaatc atctgacatg gctgatgagc ctgcccgcgc
     3361 tgtttcttgc gctgacttac ccgtttacca aacgcttttt tccgattccc caactctatc
     3421 tcgggcttgc cttttccttc ggtatcccga tggcgtttgc cgccgttgcc ggaaacgtgc
     3481 cgcctcaagc gtggatactc tttgccgcca atgtgttatg gactctggcg tatgacacgg
     3541 tttatgcaat ggcggacaaa gaagacgatt tgaaaatcgg catcaaaacc tccgccgtca
     3601 cgttcgggcg ttacgacatc gccgccgtta tgctgtgtca tggcggcttt accctgctga
     3661 tggcagtatt gggtgcggtt atcggtgcgg catgggcata ttggacggca atccccatcg
     3721 tcctgctgct gcaataccgc caatatgccg ccatcaaaag ccgcgtccgg caaatctgtt
     3781 ttgaaacgtt tttggcaaac aacagaattg gttgggtgtg gtttaccgcc atttttgccc
     3841 atacgttttt cgcgaaataa ggcagggcaa tgccgtctga agagccgtaa actgctttgg
     3901 acggcatttc tatctgtgcc gaaaagcgtt aaaatatgtt tttaaaacgc tgtgttatgt
     3961 cagcccgtac cgtatgcggg attgagattt gccctagcag tcggtacaat ctttctgttt
     4021 tgcgatgtct gaaaagagaa gcttatgagc cttatcggcg aaattttgcc tttgtcccat
     4081 attgttttgg atatggaggt gggcagtaaa aaaaggctgt ttgaggaagc gggcctgctt
     4141 ttggaacgcg aatcctcatt gtcccatgct gatgttttcg aatgtctttt tgcccgtgaa
     4201 aaactcggtt cgaccggttt ggggcagggc gttgccatcc cgcacggccg tcatgccggc
     4261 gtgaagcagg cgacgggcgc gttcatccgc acgcgcgaac ccgtcggatt tgacgcaccg
     4321 gacggcaagc cggtttccct gatttttatc ttgctggtgc cggaaaacgc aactggcgaa
     4381 catttggaag tcttatccaa actggccggc aagttttccc aaaaaagcat ccgcgaatcg
     4441 ctgatgacgg tttcttctgc ggaagaagcc cgcgccattt tgactgaaga ataatatgcc
     4501 cagtatttcc gtccgccgac tgtttgacga caaccaatac aagttacaac ttgcctgggc
     4561 cgccggcaat tcgggtgcgg acaaccgtat cggcgtagag gcggacaagc ccgtcctcgc
     4621 tttggtcgga cacctgaatt tcatccaccc caaccaaatc caagtggtcg gtttggcgga
     4681 atcggaatat ctgaaccgtc tcgaatcggg ggaaacgggt tatcagttcg gcgacctgtt
     4741 cgacatttct atgtctttgg ttattgtggc aaacggcttg ccggtttccc cggggctgcg
     4801 cgactattgc cataaaaacg atattccact gctgacttcc aaactcgaaa gcccctatct
     4861 gatggacgtg ttgcggattt acctgcaacg caccctggcg gcatcgtccg tcaaacacgg
     4921 cgtatttctc gatgtgtttg aaatcggcgt gctgattacc ggacattccg gcttgggcaa
     4981 gagcgaattg gcgttggaac tgatttcgcg cggccacagc ctgattgccg acgatgcggt
     5041 cgagctgttc cgcatcggtc cggaaacatt ggaagggcgt tgttcgccta tgctgcgtga
     5101 ttttttggaa gtgcgcggct tggggatact caatatccgc catattttcg gcgaaacttc
     5161 catccgcccc aaaaaaatcc tgcaactcat tatcaatttg gtcgaggcag acgacgagta
     5221 tatgaagcag ctcgaccggt tgagtatccg caccgaaacc gaatccatcc tcaacgtcaa
     5281 cgtccgttcg gttacgctgc ccgtcgccgt cggacgcaac ctcgccgttt tggttgaggc
     5341 ggcggtacgc aattacattt tgcagttgcg cggtaaggac agtacgcgcg aatttttgga
     5401 acgccatcag acgcaactta aagaaaacga acagaatcat gaaaatcgtc ctgattagcg
     5461 ggttgtccgg ttcgggcaaa tccgtcgcac tgcgccaaat ggaagattcg ggttatttct
     5521 gcgtggacaa cctgcccttg gaaatgttgc ccgcgctggt gtcgtatcat atcgagcgtg
     5581 cggacgaaac cgaattggcg gtcagcgtcg atgtacgttc cggcattgac atcggacagg
     5641 cgcgggaaca gattgcctct ctgcgcggac tggggcacag ggttgaagtt ttgtttgtcg
     5701 aggcggaaga aagcgtgttg gtccgccggt tttccgaaac caggcgagga catcctctga
     5761 gcaatcagga tatgaccctg ttggaaagct taaagaaaga acgggaatgg ctgttcccgc
     5821 ttaaagaaat cgcctattgt atcgacactt ccaagatgaa tgcccaacag ctccgccatg
     5881 cagtccggca gtggctgaag gtcgaacgta ccgggctgct ggtgattttg gagtccttcg
     5941 ggttcaaata cggtgtgccg aacaacgcgg attttatgtt cgatatgcgc agtctgccca
     6001 acccgtatta cgatcccgag ttgaggcctt acaccggtat ggacaagccc gtttgggatt
     6061 atttggacgg acagccgctt gtgcaggaaa tggttgacga catcgaaagg tttgttacgc
     6121 attggttacc gcgtttggag gatgaaagca ggagctacgt taccgtcgcc atcggttgca
     6181 cgggaggaca gcaccgttcg gtctatattg tcgaaaaact cgcccgaagg ttgaaagggc
     6241 gttatgaatt gctgatacgg cacagacagg cgcaaaacct gccgagccgc taatcccgtt
     6301 gaacgatgat gccgtctgaa acccgatttt ctgtttcaga cggcatttca aatattgaga
     6361 agaaaggaaa gacatggcaa tccaatggtt tcccggccat atgaacaaag cgaaaaaagc
     6421 catcgccgag cgcgccaaaa gcgtagacat ggtgattgaa atgctggatg cgcgaatgcc
     6481 cgcctccagc gaaaaccccc tgcttgccca gctttccaaa ggcaaaccca aacttaaaat
     6541 cctaaacaaa caagatcttg ccgaccccga acgcacaaag gtctggcttg accactacaa
     6601 cagccgcccc gacacgtgcg ccattgccct cgattcctcc gaaaccggcg cacacggcaa
     6661 aatcacccaa gcctgccgcg cgatgattcc ccatcggcaa ggcatagaca aacccttgcg
     6721 cgtcttgatt tgcggcattc ccaacgtcgg caaatccacc ctcatcaacg gcatgatagg
     6781 caaaaaatcc gccaaaaccg gcaacgaacc cggcatcacc aaagccgaac aacgcctttt
     6841 ccttgccgac gacttctggc tgtacgacac ccccggaatg ctgtggccga aaatcattgt
     6901 cgaagaaagc ggctacaacc tcgccgccgg cggcgcagtc ggacgcaacg cattggacga
     6961 agaagaagtc gccctcgaac ttttagacta cctccgccgc cactacctcc ctatgttgca
     7021 agaacgctac caagccgaca aagaccccag cagccactgg gacgaaaacg tttggctcga
     7081 atggatagcc aaaaaacgcg gcgcagtcct cagcggcgga cggatcaact accaaaaagc
     7141 cgccgaaaac atcctcaccg acttccgtga aggcaaaatc ggcagaatca ccctcgaaac
     7201 gccgaaccaa tgggaaactt ggctcaaaaa agcccgtcag aaagaagccg aactcaaagc
     7261 catacgcgaa gccagaaaag cagagcgtaa agggaagaag ccttcggaag cataaagaat
     7321 gccgtctgaa aaatattttt caggcagctt ctctctactc caaccgattt cagacggcat
     7381 atccaaaccc atgccgtttc agcacggata cccgtatgac cgacaaaatt tctcccgacg
     7441 cgctgattga agccgcactg ctgacccaaa ccgaaccgct gaccgaaaaa tctatgcgcg
     7501 aattgtgtgt gccgccactg tcgcaggaca aactgattga tgtgttggcg cagttgaaaa
     7561 cgcgttggca ggatagggcg ttgcaactgg tgcatacgca agagggctgg cgttttcaga
     7621 ttgttcagac ggcattcgag cggctgggca gcctgcaaga acagcgtgcg ccgcgctact
     7681 cccgcgccgt gatggaaaca ctggcgatta tcgcctacca gcagcccgta acgcgcggcg
     7741 acatcgaagg catacgcggt gtggcggtgt cgcagaacgt gatgcagacc ttgcaggatc
     7801 gggggtggat tgaagtcatc ggacatcggg acacattggg aaaacccgca ttgtgggcga
     7861 caacggcaac ttttctcagc gatttgcgct tggacggtct ggaagaactt ccgccgctga
     7921 ccgaactggg cgaactggtt ttacccgatt taatggaaat gccgcctacg gatgaagaag
     7981 agccggaagc cgtaccgtcc gataccctgc ccaactgaaa ttccaaatgc cgtctgaaac
     8041 gcacattgct tcagacggca tttcaacaaa taagcagata aaaacaagca ctaagcaaaa
     8101 ttaaggaaaa acttattttt aatttaaaaa atcttagtta taattcgtat atctaaagtt
     8161 gatattgctt ttgtcggtag aattgctaag gaatcctcac gatgcttcta acactttctt
     8221 tgcgtgattt tgtcattgtc gaaaatctga atctggattt tcaaagcggc tttaccgtat
     8281 tgaccggaga aactggcgcg ggcaagtcca ttactttgga tgcgattggt ctgctgttgg
     8341 gcgataaagc cgattacagc caagtccgca gcggcgcaaa agaagcgcag ttgtcggcgt
     8401 tgtttgatat ttcccattta cctgttttaa aagcagaatt gtatgaacag gggcttttaa
     8461 acgacggaga agaagaactc agtatccgcc gcattatcga tgccaaaggc aaaagccgca
     8521 gctttatcaa caatcaggcc gctaccttgg cgcaactcaa agccgtcggc agccagctta
     8581 tcgacatcca tgggcaaaac gcccatcatt cgcttaatca ggaagccgcc cagcgcgaat
     8641 tgttggacgc atttgcgggc agcagggcgc aggcggaaac cgtcaggcag ctttatcaaa
     8701 actgggcaaa ctcaaaaaaa gcattgcagg aagcgcagga acaggcagaa aacattgcac
     8761 tcgaacaaga gcgtctggaa tggcagttta acgaattgaa tcagttggac attaaacaag
     8821 gcgaatggga agccctcagc caaagccacg acagccttgc ccattctgcc gagctgttgc
     8881 aggctgccga agaagtcgga agcaagattg acggcgacaa cggcatccaa cgccatatct
     8941 atcaatgtca aaaactattg gccaatctgc aaaacatcga gccgcgcttt gccgagagcc
     9001 tgaatatgtt ggcaagcatc gaagccgaat tgggcgaaat cagtgccaat atgcgcgatg
     9061 tggcaggtcg cagcgacatc aatcccaacg aacttgccgc acaagagcag cgtatgggcg
     9121 agctgatggg gatggcgcgg aaataccgga tcgagcctga agagttgcct gccaagttgg
     9181 cagaaatcga agaacgcctg caaagcctgc aagctgccgc cgatttggac gcgctcgagc
     9241 ataatgttgc ccacaatttt gccgaatatc aggaagctgc ccacatcctt tctgccatgc
     9301 gccatcaggc ggcagagcgt ttgagcggcg aaacgaccga gcatatgcaa caccttgcca
     9361 tgaaaggtgc acgtttcgac atcgtcctgt tgccctcgtc gccgacggca cacggtttgg
     9421 agcaggttca atttcaagtt gccgccaaca aaggcaatcc gccccgtccg ctgaataaag
     9481 ttgcctccgg cggcgaattg gcgcgtatca gccttgcctt acaggttgtt gccagccaat
     9541 atacccaagt tcccaccctg atttttgatg aggtcgatac cggtattgga gggggagtgg
     9601 ctgaaatggt cggcaaggca ttacgtgcgt tgggcagaaa acatcaggtg cttgccgtta
     9661 cccatcttcc gcaagtcgca tcctgcggcg aaaaccactg gcgagtgcgc aagcacagcg
     9721 agggagagca aaccgtcagc gaaatcagta tattggatga aatccaacgg gtcgaagagg
     9781 ttgcccgtat gttgggcgga gaagtcatta ccgatacgac gcggcaacat gcggcagaat
     9841 tgctgcaact tgcgtcgaaa aatagtttat tttaaaatca atcagttaaa aaataactaa
     9901 aaataaaagt ctaaaacaat agacagaact cagataaatc cgtattatta cgctttctta
     9961 atcacttgaa caagtgattg tgc
//
LOCUS       DAWKJW010000055         9797 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.055, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000055 DAWKJW010000000
VERSION     DAWKJW010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9797)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9797)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9797
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.055"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(13..1308)
                     /locus_tag="WJJ54_001005"
     CDS             complement(13..1308)
                     /locus_tag="WJJ54_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEZ7341885.1"
                     /translation="MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKTDTCIIGGGLSG
                     LCTALPLAEQGHETVVLEAARIGFGASGRSGGQVISDYACGMGEIEKQVGLEQAQWFW
                     QQSLQAVELVDERVRKHAIDCDWQRGYATVAVRPQHWEELQQWHEHAQRHYGASHYQL
                     WDKAELKQQLDSDMYQGAQFDPLSGHLHPLNYTLGIARAAAEAGAQIFEQSPMTCIEP
                     HQNGWLVYTPEGSVECKNVVYAVNTYAGLNPIFKPLERKAIAVSTFIIATEPLGARAK
                     GLIRNNMAVCDNRHILDYYRLSADGRLLFGGKDNEFIDNPARMTELVRQDMLKVFPQL
                     ADVKIEYSWGGECDITANLVPHFGRLAPNVFYTQGYSGHGMAITGIAGLAVAEAILGD
                     ECRLKPFERLRQPNIILQPFLRKLGSFLGSKYYQWKDSR"
     gene            complement(1434..2321)
                     /locus_tag="WJJ54_001006"
     CDS             complement(1434..2321)
                     /locus_tag="WJJ54_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEZ7341886.1"
                     /translation="MQKSKLSWFLKLMLALSLAFLYIPLVVLVIYSFNESKLVTVWGG
                     FSTKWYGALLENDTILEAAWLSLRIAVVSSLAAVVLGTLAGYAMARIKRFRGSTLFAG
                     MISAPMVMPDVITGLSMLLLIIQVQIFLQGSEWLQHLYFDRGFFTIFLGHTTLCMAYI
                     TVVIRSRLVELDQSLEEAAMDLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLV
                     ITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVLATILIGIIGTLVIIVNYWMMRQATKR
                     DREAAEAYRQEKLAAEKAN"
     gene            complement(2321..3286)
                     /locus_tag="WJJ54_001007"
     CDS             complement(2321..3286)
                     /locus_tag="WJJ54_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEZ7341887.1"
                     /translation="MNLNKLKNKLFRRPGQRAVIAVPYIWLLVLFLIPFAIVLKISFA
                     EQEIAIPPFTPLTSIDEDLGRLNIAISYQNYADIFQNFWHTLNPFGDSENSNIYLMTY
                     WSSIKTALMTTVICLLVGYPTAYAISRANPSVRNGLLLAIMLPFWTSFLLRVYAWMGL
                     LGHNGIVNNLLIKMGIISEPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDNRLL
                     EAASDLGAGPVKSFLTITLPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKV
                     LWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK"
     gene            complement(3302..4426)
                     /gene="potA"
                     /locus_tag="WJJ54_001008"
     CDS             complement(3302..4426)
                     /gene="potA"
                     /locus_tag="WJJ54_001008"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HEZ7341888.1"
                     /translation="MTATTASSTKPYLQIQGLVKKFGDNYAVDNIDLDIYQHEIFALL
                     GSSGSGKSTLLRMLAGMESPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVE
                     QNIAFGLKQDKMPKGEIAARVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKR
                     PKILLLDEPLGALDKKLRQQTQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSD
                     GQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGVVIEDHADYAVIECEGLENHVRIDH
                     GLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLGNG
                     RVVKSQVPAPYWYVRNITPPTWDETVYISWPENQPTPLFR"
     gene            complement(4621..4728)
                     /locus_tag="WJJ54_001009"
                     /pseudo
     CDS             complement(4621..4728)
                     /locus_tag="WJJ54_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(4807..5076)
                     /gene="rpsO"
                     /locus_tag="WJJ54_001010"
     CDS             complement(4807..5076)
                     /gene="rpsO"
                     /locus_tag="WJJ54_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEZ7341889.1"
                     /translation="MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFK
                     ANPKDHHSRRGLLKMVSQRRRLLAYLRRTQPDTYRALITRLGLRK"
     gene            complement(5299..6234)
                     /gene="secF"
                     /locus_tag="WJJ54_001011"
     CDS             complement(5299..6234)
                     /gene="secF"
                     /locus_tag="WJJ54_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEZ7341890.1"
                     /translation="MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVTRGLNFSVE
                     FTGGTVMEVQYQQGADVNKMRERLDTLKIGDVQVQALGTNKHIMIRLPNKEGVTSAQL
                     SNQVMDLLKKDSPDVTLRQVEFIGPQVGEELVSNGLMALGFVVIGIIIYLSMRFEWRF
                     AVSAIIANMHDIVIILGCFAFFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRK
                     PAMRGHAVPEVIDNAITATMSRTIITHGSTEAMVVSMLVFGGAALHGFSMALTIGIVF
                     GIYSSVLVASPLLLMFGLSRDNIGKEPKKKEEIVV"
     gene            complement(6238..8091)
                     /gene="secD"
                     /locus_tag="WJJ54_001012"
     CDS             complement(6238..8091)
                     /gene="secD"
                     /locus_tag="WJJ54_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEZ7341891.1"
                     /translation="MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAII
                     INEQTQFKVDAALKNAGIQTDGMFVVDNSLKVRFKDTETQLKARDVIENTLGEGYITA
                     LNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR
                     EKIRSGTVRQAGNSLTVPLQDAGDVQKALPQLRKLFPEATLNSDGSNIVLTLSEEAVN
                     KVRSDAVKQNITTLHNRVNELGVAEPVIQQSGADRIVVQLPGVQDTAKAKDIIGRTAT
                     LELRMVEDDPAKLREALEGNVPSGYELLSSGGDRPETLLISKQVELTGDNINDAQPSF
                     DQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGR
                     VEISGSMTTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAI
                     VAAFMVVYYRLMGFFSTIALSANILFLIGILSAMQATLTLPGMAALALTLGMAIDSNV
                     LINERIREELRAGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAV
                     VHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGAVWKPEAETAAGKE"
     gene            complement(8303..8569)
                     /gene="yajC"
                     /locus_tag="WJJ54_001013"
     CDS             complement(8303..8569)
                     /gene="yajC"
                     /locus_tag="WJJ54_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEZ7341892.1"
                     /translation="MNQAVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLAALKVGD
                     KVVLAAGFKGKVTRVGEQFFTVDIGQGTKIEVEVERNAISAKVD"
     gene            8697..>9797
                     /locus_tag="WJJ54_001014"
     CDS             8697..>9797
                     /locus_tag="WJJ54_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEZ7341893.1"
                     /translation="MSLTRLILKFYALLRLFLGKNARTAWISHPACTGHEPGANHPDS
                     PDRILCIEQALRRAGIWQHLQTIEAEEISDTRLALTHTSKYLNRLESRLPEDGKICRL
                     DDDTVISKNSLSAARFSAGSAVQAVDMVMNRKAWHAFCAARPPGHHAGSGKAGGFCLL
                     NNVAAGVMHAIAEYRLKRIAVIDFDVHYGDGTAEIFKDDPRILFFNLFETDLFPFPEN
                     NDMPDGGNMVHLPLPPGTGSRTFREAVRRQWLPRLAAFKPELVLLSAGFDAHRLDESG
                     RLNLHEADFAWLTHKIIQTASGCPGKIVSVLEGGYTLEPLAQSAAEHIRVLAGLGKSD
                     AATAYQKTLDPTKKRFAKPKTGQVRQPTQSDRY"
BASE COUNT         2514 a         2596 c         2430 g         2257 t
ORIGIN      
        1 tgcctgcgac gcttaacggc tgtctttcca ctgataatat ttcgagccga ggaaagaacc
       61 gagtttgcgc aaaaacggtt gcaggataat attcggctgg cgcaaccgct caaacggctt
      121 cagacggcat tcgtccccta aaattgcttc ggcaaccgcc aaacctgcaa tacctgttat
      181 cgccatcccg tgtccggaat aaccttgcgt ataaaaaaca ttcggggcca aacgtccgaa
      241 atgcgggaca aggttggcgg taatatcgca ctccccgccc cacgaatatt cgattttgac
      301 atcggcaagc tgcggaaaaa ctttaagcat atcttggcgg acaagctcgg tcatacgcgc
      361 aggattgtcg ataaactcgt tatccttacc gccgaaaagc agtctgccgt ccgcgctgag
      421 gcggtaataa tccaaaatat ggcggttgtc gcatacagcc atattgttgc ggataagccc
      481 ttttgcgcgc gcccccaagg gttcggtggc aataataaag gtgctaacgg caatcgcctt
      541 acgctccaaa ggcttgaata tcggattcaa accggcatag gtattgacag catagaccac
      601 atttttgcac tcgacgctgc cttcgggcgt gtaaaccagc caaccgtttt gatgcggttc
      661 gatgcacgtc atcggggatt gctcgaaaat ctgcgcaccg gcttcggcag cggcacgagc
      721 gatgcccaaa gtgtaattga gcggatgcag gtgtccggat aaggggtcga attgtgcccc
      781 ttggtacata tcgctgtcaa gctgctgttt caactcggct ttatcccaaa gttgataatg
      841 actcgcaccg taatgccgtt gggcgtgttc atgccactgc tgcaactctt cccaatgctg
      901 cggacggacg gcaaccgtgg cataaccgcg ctgccaatcg caatcaatgg catgtttgcg
      961 gacgcgttcg tccaccagtt cgaccgcctg caaagactgt tgccaaaacc attgcgcctg
     1021 ctccaagccg acctgttttt caatttcccc cataccgcag gcgtaatcgc tgataacctg
     1081 cccgccactc cgtcccgacg cgccgaaacc gatacgcgcg gcttccaaca caaccgtttc
     1141 atgtccctgc tccgccaagg gcaatgcagt gcacaaacca ctcaatccgc cgccgatgat
     1201 acaggtatcg gttttcagac ggcattgaag tttcggataa acagtatgag gattaaccga
     1261 actaaaataa taagaaggca gatattcttg aaaatcaggg cgaatcattg tgtttgcttt
     1321 atcaggtgta ttttcggacg gaatgataca ggctgtcggg ccatatcgtc caaacagaaa
     1381 atcggttgaa gaaaacaggc tgacccagtc atgcggtcag cctgccttat taattaattt
     1441 gctttctcgg cagccaattt ttcttggcgg taggcttctg ccgcttctcg gtcacgcttg
     1501 gttgcctgcc tcatcatcca ataattgacg atgatgacca atgttccgat gatgccgatt
     1561 aggatggtcg ccaagacatt catctgcgga tcaagaccca gcttgatttt ggagaaaatc
     1621 acctgcggca atgtggatga accggggccg gagaggaatg aggtaattac caaatcatcc
     1681 aaagacaggg taatgccgag cagaaagcct gaagcgatgg caggggcaat caaaggcaaa
     1741 gtgatgacaa aaaagatttt cagcggacgc gcgcccaaat ccattgcggc ttcttcgagc
     1801 gattggtcaa gctcaaccag acgcgaacgg ataacaacgg taatgtatgc catgcacagc
     1861 gtcgtatgtc ctaagaaaat agtgaaaaag ccacgatcga agtagagatg ttgtaaccat
     1921 tcgctgccct gcaaaaatat ctgtacctga ataatcagca gcagcataga cagaccggta
     1981 atcacgtcgg gcatcaccat aggtgcggaa atcataccgg cgaacaaggt actgccgcga
     2041 aaacgtttaa tccgcgccat cgcatagcct gccagcgtgc ccaaaacgac ggcagcaagc
     2101 gaagacacaa cggcaatccg cagcgacagc caagcggctt ccaagatggt gtcgttttcc
     2161 agcaatgcgc cgtaccactt ggtcgaaaag ccgccccaaa cggttaccag cttggattcg
     2221 ttaaacgaat agatgaccaa aacaaccagc gggatataca gaaacgccag cgacagtgcc
     2281 aacatcagtt tcaagaacca agataatttg gatttctgca ttatttggct ccttcttcca
     2341 attcgcggtt ttcataatgc tgaaacaggg caatcggcac gaccagcagc gcgaccatca
     2401 cgacggcgac ggcggaagcc agcggccagt tgttttgatc gaagaacgcc tgccacaaga
     2461 ctttaccaat catcaggttt tccgaaccgc cgaccagctc gggaatgacg aactcgccga
     2521 cagcagggac gaaaaccagc atggagcctg caataatgcc ggttttcgac aaaggcaggg
     2581 taatcgtcaa gaacgatttg accggccccg cacccaaatc ggaagccgct tcaagcaggc
     2641 ggttgtcgag tttcaccagt tgcgtgtata gcggcagaat cataaacggc agataggcgt
     2701 aaaccatcac caaattgagc gaaaaggcat tgtagaacaa atccaaaggc tcgctgataa
     2761 tacccatttt aatcaacagg ttgtttacaa taccgttatg cccgagcaga cccatccacg
     2821 catagacgcg caacaggaac gatgtccaaa agggcagcat aatggcaagc agcaaaccat
     2881 tgcggacaga aggattggca cgagaaatcg cataggcggt cggataaccg accaacaggc
     2941 aaatcactgt cgtcatcaat gcggttttga ttgaagacca gtaggtcatc agatagatat
     3001 tgctgttttc actgtcgccg aacgggttaa gggtatgcca aaaattttgg aaaatatcgg
     3061 catagttttg ataactgatg gcgatattca gacgacctaa atcttcgtcg atgctggtca
     3121 gcggcgtaaa cggcggaatg gcgatttctt gttcggcaaa gctgattttc agcacgatgg
     3181 cgaacggaat cagaaacagc accaaaagcc aaatatacgg tacggcaatc accgcacgct
     3241 gccccggacg gcggaacagt ttgtttttca gtttattaag gttcattgca ttccccttaa
     3301 atcaacggaa caacggagtc ggttggtttt ccggccagct gatatagacg gtttcgtccc
     3361 aagtcggcgg tgtaatgttg cgcacatacc agtaaggggc ggggacttgg cttttgacga
     3421 cgcgcccgtt gccgagcttg atatggtaaa tggcgaagct gcccaaatag gcgatttctt
     3481 ttaccgtgcc tttcgcccag ttgtagtcgc ccaaatattc gggtttttct ttatataaat
     3541 caatatcctc tggtcgaata ctaacccaaa ggtcctgctc gctcggacca cccaaaccgt
     3601 gatcgatgcg gacgtggttt tccaaacctt cgcattcgat aacggcatag tcggcatgat
     3661 cttcaatcac cacaccgtca aagatgttgg tttcgccgat aaactcggca gtgaagcggc
     3721 tgttgggata gtcgtacacg tcgctgggtg tgccgacttg ctgcaactga ccgtcagaca
     3781 taatggcgat gcgggtcgcc atcgtcatcg cctcttcttg gtcgtgcgta accataatac
     3841 aggttacgcc gacttgttcc agcgtattga ccaactcaag ctgggtttgt tggcgcagtt
     3901 ttttgtccaa tgcaccgagg ggctcatcca gcagtagaat tttcggacgt tttgccagac
     3961 tgcgtgccaa agcaatgcgc tgctgctgac cgccggacaa ttggtgcggt ttgcgtttag
     4021 caaatttggt catctgaacc aggcggagca tttcttcgac gcgcgcggcg atttcgcctt
     4081 taggcatttt gtcctgtttc agaccgaagg caatgttttg ttctacggtc atatgcggaa
     4141 aaagcgcgta actttggaac atcatattga tggggcgatc atagggtgca agtttggtaa
     4201 tatcctgacc atcaaggata atttttccct gattgggact ttccataccc gccagcatac
     4261 gcagcagtgt agattttccg ctgccggaac tgcccaaaag ggcgaagatt tcgtgttgat
     4321 aaatgtccaa gtcgatgtta tcgacagcgt aattgtcacc aaactttttc accaaacctt
     4381 ggatttgcag ataaggcttg gttgaagacg cagtggttgc ggtcataatg gcaatactcc
     4441 aataaaaaga cgagtaccgg caaaacggat gttcgaatgg gtgataaaaa gctgtttgat
     4501 tgctggcggg agttaaacgt ttgatgccgt ctgaaactct tgtaaagcgc acgggcagca
     4561 tgaaatggaa caagattcca aagaacttta tattatatta gtttatgcgg ttttcgggca
     4621 atatagtgga ttaaatttaa accagtacag cgttgccttg ccttgccgta ctatttgtac
     4681 tgtctgcggc ttcgtcgcct tgtcctgatt taaatttaat ccactataaa tatggatttg
     4741 agcttgtcgg aaagcaacag aaaagaaaac accgcccatt tttctgggcg gtgtcggaaa
     4801 gcgtaattat ttacgcagac ccaagcgggt aatcaacgcg cgatacgtat cgggctgggt
     4861 acggcgcaag taggccagca ggcggcggcg ttggctgacc attttcaaca ggccgcgacg
     4921 gctgtggtgg tctttggggt tggctttgaa gtggggggtc aggtcgttga tgcggaaagt
     4981 caacagagcg acttgtactt cggaagagcc ggtgtcgcct tctttgcgtt ggaaatcttt
     5041 aacgatttgt gctttttgtt ctacggtcag tgccataatg aaaactccaa aaatataaga
     5101 atccccatag ggattcagac aagtttgcca agcctgaaga caacggcaaa ctccctatgc
     5161 ccaagatagg acaacgtggc attatgacac aattcccgca tttctgcaca atattttaag
     5221 accgtggaag taaccgttaa aaatgccgtc tgaagcattg tctgcttgag acggcaatgt
     5281 tcagacggca tatgcgcttc aaaccacgat ttcttctttc ttcttcggtt ctttaccgat
     5341 attgtcgcgg ctcaaaccga acattagcag aagcgggctg gcaaccaata cggaagaata
     5401 aatgccgaac acgatgccaa tggtcaacgc catagaaaag ccgtgcaagg ccgcaccgcc
     5461 gaacaccagc atggatacga ccatcgcctc ggtcgaaccg tgggtaatga tggtgcggct
     5521 catcgttgcg gtaatcgcgt tgtcgatgac ttccggcacg gcatgtccgc gcatcgccgg
     5581 cttgcggaag ttttcacgga tacggtcgaa gacgacgacg gattcgttca cagaatagcc
     5641 caatacggca aggatacccg ccaagacggt cagcgaaaat tcccattgga agaaggcaaa
     5701 gcagccgaga ataatcacga tgtcgtgcat attggcgata atggcagata cggcaaaacg
     5761 ccattcaaaa cgcatcgaca ggtaaataat gatgccgata acgacaaaac ctaaagccat
     5821 caatccatta cttaccaatt cctcaccgac ttgcgggccg ataaattcga cttggcgcaa
     5881 ggtaacgtcg ggactgtctt ttttcagcaa atccataacc tgattggaca actgtgcgga
     5941 agtaacacct tctttgttcg gcaggcggat catgatgtgt ttgttcgtac ccaatgcctg
     6001 aacctgtaca tcacctattt tcagcgtatc gaggcgttcg cgcatcttat tgacatccgc
     6061 accctgctga tattggactt ccattaccgt accgccggta aattcgacag agaaattcag
     6121 acctctggta accaaaaaga acacggcagc gataaacgta accaacgaaa tgaaggtcgt
     6181 cagtttgccg tagctcataa acggaatatc gcgtttgatt ttaaagagtt ccatagctta
     6241 ctccttacct gccgcagttt cggcttcagg tttccatacc gcaccgatgg aaatattctg
     6301 caatttgcgt ctgcgtccgt accacagatt gaccaacgca cggaatacga cgacggagga
     6361 atacatcgaa gtcagaatac ccaaacagtg tacgaccgca aaaccgcgta ccgggccgga
     6421 accgaatacc aaaagcgcga taccggcaat cagcgaagtc aggttggaat cgacaatggt
     6481 cgcccatgcg tgttggaaac cgagattgat tgcctgctgc ggcggcacgc cggcacgcaa
     6541 ttcttcgcgg atacgttcgt taatcaagac gttggagtcg attgccatac ccaaagtcaa
     6601 cgccagcgcg gccatacccg gtaacgtcaa cgttgcctgc atggcagaca aaataccgat
     6661 taggaacagt atgttggcac tcaatgcaat ggtagaaaag aaacccatca gacgatagta
     6721 aaccaccatg aatgcagcaa cgatggcaaa accccataaa gtcgaatgga agcctttttc
     6781 gatgttctcc ttacccaaag acggaccgat ggtacgttct tcgacaatct gcatcggcgc
     6841 ggcaagagaa ccggcacgca acagcaaaga cgtatcattg gcttcggctg tcgtcatgct
     6901 tccggaaatt tccacgcgtc cgccggtaat ggcagtacgg ataaccggcg cggttacaac
     6961 ctcggatttt ccttggtcga tcaaaaccat cgccatgcgt ttgccgacat ttgcggcagt
     7021 cagttcgcca aaaatgctgc cacccgcgct gtccaagctc agactgacgg caggtgcgcc
     7081 catttggtcg aaactcggtt gcgcatcgtt gatgttgtcg cccgtcagct cgacctgttt
     7141 gctgattagc agagtttcgg gacgatctcc gccgcttgaa agcagctcat aaccgctcgg
     7201 cacgttgcct tccaatgcct cgcgcaactt ggcaggatcg tcctccacca tacgcaattc
     7261 caaagtcgcg gtacggccga tgatgtcttt tgccttggca gtatcctgaa cgcccggaag
     7321 ctgcacgacg atacggtcgg caccggactg ctggatgacg ggttcggcca cgcccaactc
     7381 gttcacacgg ttgtgcaggg tagtgatgtt ctgtttgacc gcatcggaac gcactttatt
     7441 gaccgcctct tccgaaagcg tcaagacgat attgctgccg tctgaattca gcgttgcttc
     7501 aggaaacagc ttgcgcaact gcggcagagc cttttgcaca tcacctgcat cctgcaaagg
     7561 gacggtcagg ctgtttccag cctgacgcac cgtgccgctg cggatttttt cgcggcgcag
     7621 ttcgcggcgg atgtcgcccg aataacgttc aaacgttttc tgcatcgccg ctttcatatc
     7681 gacctgcatg gtgaaatgca cgccgccgcg caagtccaaa cccaaaaaca tcggattggc
     7741 tttgattttc gccatccatt cggggctgtc cgccaacagg ttgagcgcgg taatataccc
     7801 ttcgcccaaa gtgttttcga tgacgtcgcg cgctttaagc tgcgtttctg tgtctttgaa
     7861 acgcactttc agtgaattgt ccacaacaaa catcccgtcg gtctgaatac ctgcgttttt
     7921 cagcgcggca tccactttga attgagtctg ttcgttgatg atgatggctt gtcggttggt
     7981 cgatacctgc acggcgggtg tttcgccgaa taggttgggc agcgaataca ctgcggcaac
     8041 cgcaattgtg aacacaatca gcagatattt ccataaagga taacggttca tcattgttcc
     8101 ttaatggttg gaaccccacc ctttcggtgg tgtcggaatc gggctatttc agaagaggca
     8161 aaaacccttc ccagccaggc aagaccggaa ggcggcatct tgaatatgcc gccctgcgtg
     8221 tcggaacatg gtcaagcctt cggttggaat tcaaaacaaa gtgccgcatt cgggcttttc
     8281 cgatgcggct tgtcggcaca aatcaatcga cttttgcaga aatcgcattg cgttccactt
     8341 cgacctcgat ttttgtaccc tgtccgatat ccacggtaaa aaactgttcg ccgactctgg
     8401 ttaccttacc cttgaaacct gccgccaaga ccactttgtc gccgactttc aaggcggcaa
     8461 gcattgcctg atgcgctttg aatttctttt gctgcggacg catgatcagg aagtagaaca
     8521 ccaccataat caacactaaa ggagcaaatt gtgcaacagc ttgattcata atttatccgt
     8581 tctttctaat atggttgaaa atcgagaggg gtatataata acataagacc gtaaacaata
     8641 tatcgggttt gccgtccgta ccgaccgtat accgcagcct gcccgtccac aaacccatgt
     8701 ccttgacccg cctaatcttg aaattctatg cgctgttgcg cctctttttg ggcaaaaacg
     8761 cccgcaccgc atggatttcg catcccgcct gcaccgggca cgaacccggc gcaaaccatc
     8821 ccgattcgcc cgaccgcatc ctctgcatcg agcaggcatt gcgccgcgcc ggtatttggc
     8881 agcacctcca aaccatagag gcggaagaaa tcagcgatac gcgcctcgcg cttacccata
     8941 cgagcaaata tttaaaccgg ttagagtccc gcctgcccga agacggcaag atttgccgct
     9001 tggacgacga caccgttatc agcaaaaact ccctgtctgc cgcccgtttt tccgcaggtt
     9061 cggcagttca ggcagtcgac atggtcatga accgtaaagc atggcatgcc ttttgcgccg
     9121 cccgcccgcc cggacaccat gcgggcagcg gcaaagccgg cggattctgc ctgctgaaca
     9181 acgttgccgc cggcgtcatg catgccattg ccgaataccg cctgaaacgc attgccgtca
     9241 tcgatttcga tgtccactac ggcgacggta cggcagaaat attcaaagac gatccgcgca
     9301 tcctgttttt caacctgttt gaaaccgacc tttttccttt ccccgaaaac aacgatatgc
     9361 ccgacggcgg caatatggtg cacctgccct tgccgccggg aacgggcagc cgcacattcc
     9421 gcgaagccgt ccgcagacag tggctgcccc ggcttgccgc attcaaaccc gaactggtgc
     9481 tgctgtcggc aggattcgac gcacaccgtc tagacgaatc gggcaggctc aacctgcacg
     9541 aggcggattt tgcctggctg acacacaaaa tcattcagac ggcatcgggc tgccccggca
     9601 aaatcgtatc cgtactcgaa ggcggctaca cccttgaacc tctggcacaa tctgctgccg
     9661 agcatatccg cgtgctggca gggctgggca aatccgatgc cgcaaccgcc tatcagaaaa
     9721 cactggaccc aacaaaaaaa cggtttgcca aaccgaaaac cggacaggtg cgccaaccta
     9781 cccaatccga ccgttac
//
LOCUS       DAWKJW010000056         9767 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.056, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000056 DAWKJW010000000
VERSION     DAWKJW010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9767)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9767)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9767
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.056"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(313..546)
                     /locus_tag="WJJ54_001015"
     CDS             complement(313..546)
                     /locus_tag="WJJ54_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HEZ7341894.1"
                     /translation="MKLTLMFREYCSLCHKMRDALKPFQNEYGFGLEVVDVDENPVLE
                     EKYNELVPVLLAGDEEICHWFLDEDRLKQFLER"
     gene            complement(712..912)
                     /locus_tag="WJJ54_001016"
     CDS             complement(712..912)
                     /locus_tag="WJJ54_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HEZ7341895.1"
                     /translation="MFVCICNAVTDHQIKETIAAGATTMGDLQSQLGVASCCGCCGEL
                     AASFLTAHNAQPTVTAGINVQA"
     gene            complement(1084..1959)
                     /gene="xerD"
                     /locus_tag="WJJ54_001017"
     CDS             complement(1084..1959)
                     /gene="xerD"
                     /locus_tag="WJJ54_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEZ7341896.1"
                     /translation="MEEGLIDRLLETLWLDRRLSQNTLNGYRRDLEKIARRLSQSGRT
                     LKDADEADLAAAVYVDGEQRSSQARALSACKRLYIWMEREGIRTDNPTCLLKPPKIDK
                     NIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLDRG
                     CITALGKGDKQRMVPMGQESAYWVERYYTEARPLLLKGRNCDALFVSQKKTGISRQLA
                     WMIVKEYASQAGIGHISPHSLRHAFATHLVRHGLDLRVVQDMLGHADLNTTQIYTHVA
                     NVWLQGVVKEHHSRN"
     gene            complement(2011..2451)
                     /locus_tag="WJJ54_001018"
     CDS             complement(2011..2451)
                     /locus_tag="WJJ54_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEZ7341897.1"
                     /translation="MDVKYEFTLPSSSGADFHSAEHLPLVVYFYPKDSTPGCTTEGLD
                     FNARLEQFEALGYTVVGISRDGVKAHQNFCAKQGFRFELLSDKDETVCRLFDVIKLKK
                     LYGKESLGIERSTFVLNKDGEIAHEWRKVKVAGHAQEVLETLSR"
     gene            2772..3710
                     /locus_tag="WJJ54_001019"
     CDS             2772..3710
                     /locus_tag="WJJ54_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEZ7341898.1"
                     /translation="MSIHTLKRLPSSLLLGLCLSLPSAHLFADNDILGQFLEQNMLTS
                     SDPIEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISK
                     LMSAMVVLDANLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKELLHLSLMSSENRA
                     THALGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGLNFQNVSTAKDLSLMVNAAA
                     QYPQIRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKA
                     NIQNQPVTIVLLNSPTSATRVNDARKIESWMLQQRS"
     gene            3839..4132
                     /gene="hfq"
                     /locus_tag="WJJ54_001020"
     CDS             3839..4132
                     /gene="hfq"
                     /locus_tag="WJJ54_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEZ7341899.1"
                     /translation="MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYV
                     VLLRNTSVTQMVYKHAISTIVPARSVNLQHENRPQAAPASTLVQVETVQQPAE"
     gene            4217..4783
                     /locus_tag="WJJ54_001021"
     CDS             4217..4783
                     /locus_tag="WJJ54_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ7341900.1"
                     /translation="MLLQNILPFAHCLLRKALPEGGNALDGTAGNGHDTLFLAQTAGI
                     RGKVWAFDIQPQALSRTRCRLKEARYENVQLILDGHENLKQYVSEPLNAAIFNFGWLP
                     GGDKSLTTHTETSIPALCATLSLLKEGGMLIAVLYPGHENGKQEAEAIEQWAKNLPQE
                     QFAVLRYGFTNRKNNPPYLLAFEKLRQK"
     gene            4837..5211
                     /locus_tag="WJJ54_001022"
     CDS             4837..5211
                     /locus_tag="WJJ54_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HEZ7341901.1"
                     /translation="MQYLIVKYSHQIFVTVTILLFNIRFFLLWKNPEKPLAGLWKTLP
                     HLNDTMLLFTGLWLMKITHFSPFNAPWLGTKILLLLAYIALGMMMMRARPRSVKFYAV
                     YLLAICCVACIVYLAKTKVLPF"
     gene            5221..5715
                     /gene="folK"
                     /locus_tag="WJJ54_001023"
     CDS             5221..5715
                     /gene="folK"
                     /locus_tag="WJJ54_001023"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEZ7341902.1"
                     /translation="MNNRHFAVIALGSNLDNPAQQIRGALDALSSHPDIRLEQASSLY
                     MTAPVGYDNQPDFVNAVCTVSTDMDGISLLSLLNRIEADFGRERSFRNAPRTLDLDII
                     DFDGLSSDDPRLTLPHPRAHERSFVIRPLAEILPDFVLGKHGKVAELSKQLGNQGIRL
                     LPDK"
     gene            complement(5842..6321)
                     /locus_tag="WJJ54_001024"
     CDS             complement(5842..6321)
                     /locus_tag="WJJ54_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEZ7341903.1"
                     /translation="MPESIFKQISLDILKLHRDSVYSLLATSGCNCQVHEAAYVNIDG
                     KYYISLSCEPEVGEVKTGILLIEDESRNLRLSWVGSARELDRKDSVYKRALSALSRKL
                     GRCKDRLHTAVQPFLLELVPEKGRFSVGDEEVWISRNDLVRALYPVGYSMRQAMLQI"
     gene            complement(6541..7278)
                     /gene="ubiE"
                     /locus_tag="WJJ54_001025"
     CDS             complement(6541..7278)
                     /gene="ubiE"
                     /locus_tag="WJJ54_001025"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEZ7341904.1"
                     /translation="MGGQKTHFGFSTVNEDEKAGKVAEVFHSVAKNYDIMNDVMSAGL
                     HRVWKHFTINTAHLKKGDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR
                     DRLLNEGMILPVSLADAEKLPFPDNYFNLVSVAFGLRNMTHKDAALKEMYRVLKPGGT
                     LLVLEFSKIYKPLEGAYDFYSFKLLPVMGRLIAKDAESYQYLAESIRMHPDQETLKQM
                     MLDAGFDSVDYHNMSAGIVALHKGVKF"
     gene            complement(7321..7689)
                     /locus_tag="WJJ54_001026"
     CDS             complement(7321..7689)
                     /locus_tag="WJJ54_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HEZ7341905.1"
                     /translation="MNNIPVEIRLLKNRTVLVLTYGDEPKNLPAEFLRVYSPSAEVRG
                     HGVGQDVLQTGKADVQITDLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQ
                     EYLDKLAAAGASRFEKQSDC"
     gene            7809..9428
                     /gene="mnmC"
                     /locus_tag="WJJ54_001027"
     CDS             7809..9428
                     /gene="mnmC"
                     /locus_tag="WJJ54_001027"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HEZ7341906.1"
                     /translation="MDNLVWDGVPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQ
                     DASDAECRLKHRLDQATQCLQFDSINLIEHILPDVRFWLVPPSRTRRLHEHFHHISWQ
                     TEAIPQTESKPDKPWFALPQTSERQKPEHILVIGSGISGAATAHALASHGISVTVLEA
                     RKAAQAASGNRQGLLYAKISPHDTEQTELLLAGYGYTKRLLGHILPESETWGGNGIIH
                     LNYSRTEQQRNHELGLQKHHNHLYRSITPAEAEKIAGIPLNTPYAEPLCGLFWQYGVW
                     LNPPAFVRTLLNHPLIGLHEDTPLTDISHDGEKWIASTPNGIFSATHIIYCTGAHSPR
                     LPETNLAALPLRQIRGQTGLTPSTPFSEQLRCAVSGESYISPSWHGLHCYGASFIPNS
                     SHTGWNEAEEASNRQALAHLNPALSESLFAANPNPQKHQGHAAIRCDSPDHLPLVGAL
                     GDIAAMRQTYTKLALDKNYRIDTPCPYLPNAYVNTAHGTRGLATAPICAAAIAAQILG
                     LPHPFSQRLRHALHPNRTIIRAIVRRKDLTP"
     gene            complement(9425..9574)
                     /locus_tag="WJJ54_001028"
     CDS             complement(9425..9574)
                     /locus_tag="WJJ54_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341907.1"
                     /translation="MDSKGNLLGIPYSLFWEENVMGVFDILPSGLVCLFEYDFLWSGR
                     HAAKA"
BASE COUNT         2615 a         2990 c         1961 g         2201 t
ORIGIN      
        1 ctaccgatta cacaaacaca tatcatcttt acacaatcat gcttccatca acagtaaaac
       61 atgatatgat tgccaacaat aacatctcac aataaatttt ctaattttta ttgaaaaaat
      121 caataaataa gaattctccc aaccgacaaa taaaataaag aaagggttaa tatgcaacat
      181 cgaagaagac tagcaattta ccaagcatcc aaacgtgctt cctttaccgg caggtcatca
      241 accccgcaaa aacgtaaaga acgttaattt gaaaaaaatg ccgtctgaag tcctgcttca
      301 gacggcattt ttttaccgtt cgagaaactg tttcaacctg tcctcatcca aaaaccagtg
      361 gcagatttcc tcatctcccg ccaacaaaac gggaaccagc tcattgtatt tttcttccaa
      421 aacaggattt tcatccacat cgaccacttc cagcccgaac ccgtattcat tttgaaaagg
      481 tttgagtgca tcgcgcattt tgtggcacaa gctgcaatat tcacgaaaca tcaaggtcaa
      541 tttcatccgc gtttccttat ctgtcaattt gcacacgcca aagccttaga cgcagcagaa
      601 tcatggtcta tttgggaaaa aacaatgttt tcaaggaaga tgatactcaa gtcctgccaa
      661 aaacagcaaa aatgccgtct gaacagttca gacggcattt ccaaaaccgt tttacgcttg
      721 aacattgata cccgccgtaa ccgtcggttg cgcattgtgc gccgtcagaa acgaagcggc
      781 aagctcccca cagcagccgc agcagctcgc tacgcccaat tgcgactgca aatcgcccat
      841 tgtggtcgcg ccggcggcga tggtttcctt gatttgatgg tcggtaacgg cattgcagat
      901 gcagacaaac attttgtgct ccgtgtgttc tcaaactatc gtaccgatag cggcttttat
      961 tatcgtatgc gaatataaat aaaaacggtt cgcattgcaa ggtcggtata cacggtttgt
     1021 cttggtaatt ttttatcaag tttgcatttt cgattgattt cttattaaac caaagtagaa
     1081 gcctcagttt cgggaatggt gttccttcac tacaccctgc aaccatacgt tggcaacatg
     1141 ggtataaatc tgcgtcgtat tcaaatcggc atgtcccaac atatcctgaa ccacgcgcaa
     1201 atccaagccg tgccgcacca gatgcgtggc aaaggcgtgg cgcaggctgt gcgggctgat
     1261 gtgcccgatg cctgcctgac ttgcatattc tttgacaatc atccatgcca actgacggga
     1321 aatgcccgtc tttttctgac tgacaaacaa tgcgtcgcaa ttcctgcctt tcagcagaag
     1381 tgggcgtgcc tccgtataat agcgttccac ccaatacgcc gactcctgcc ccatcgggac
     1441 catcctctgc ttatcaccct ttcccagcgc ggtaatacag cccctgtcca aatccacatt
     1501 gccgaagttc agcccgaccg cctcgctgac gcgcaagccg gtcgcgtaca tcaattcgag
     1561 caaagcctta tcccgcaaac cgtgcggcgt gtcggtatcc ggggcggcaa gcagtcggga
     1621 aatctgctgc tcggtgatca gggtcggaat attcttgtcg attttgggcg gtttcagcag
     1681 gcaggtggga ttgtccgtcc ttatgccttc acgctccatc catatataca ggcgtttgca
     1741 cgccgataat gcgcgcgcct gcgaactccg ttgctctccg tcaacataaa ccgccgccgc
     1801 caaatccgct tcgtccgcat ccttcagcgt tctgcccgat tgggacaggc ggcgggcgat
     1861 tttttccaaa tcgcgccggt aaccgtttaa agtattctga ctgagccgcc tgtccaacca
     1921 cagcgtttca agcagcctgt cgatcaaacc ttcttccata ccgttccaaa caaatgccgt
     1981 ctgaatcttc ttcagactgc atggttcaca ttatcgggaa agcgtttcca atacttcctg
     2041 cgcgtgaccc gccactttga ctttccgcca ttcatgggcg atttctccat ccttattcaa
     2101 gacgaacgta ctgcgctcga tacctaacga ctctttcccg tacagtttct tcaatttgat
     2161 gacatcaaac aggcggcaca ctgtttcatc cttgtcactc aacagctcga accggaaacc
     2221 ctgcttggcg caaaaattct gatgcgcctt tacgccgtcg cgggaaatac cgaccacggt
     2281 ataacccaat gcctcaaact gttccaaacg cgcattgaaa tccaagcctt ccgtcgtaca
     2341 gccaggcgta ctgtctttcg gataaaaata cacgaccaaa ggcagatgtt ctgccgaatg
     2401 aaaatccgca ccgctgctcg aaggcagggt aaattcatat ttcacatcca tagtcctact
     2461 cccgatattc ccattattca aaacggcacg cagacgcacc gccgcaattg ccaaaccaac
     2521 cccgattcta ccgccccaaa ggacaaggat tcaaccgccg gaaacatcca aaccgacaca
     2581 cgacggcatg aaaaatatcc atgtcaaacc acaaaatatg ttccgattta aaaacagaat
     2641 gttataaaac ccaatcccca aaacacaaca agaccgcccg cctacgggca gtctcctgtc
     2701 agacgacata ctttacagat ggctgttttt tcaacaaaat aacgccaata ctcaaaaata
     2761 tggaatcaaa aatgtccatc catactctga aacgcctgcc ctcatcgctg ctgctcggtc
     2821 tctgcctttc cctgccgtca gcccaccttt ttgccgacaa cgacatttta gggcaatttt
     2881 tagaacagaa catgcttacc tcctccgatc cgatagaaat attcgccgaa agcacaatac
     2941 accccaccaa cacccaagcc attacaggcg gtctgattct ctcctcacag tctgccctgg
     3001 tcgtcaacaa caaaaccgga cagatactgt atcagaaaaa cgccgacagg attatgccca
     3061 tcgcctccat ttccaaactg atgagcgcga tggtcgtttt ggatgcaaac ttggacatga
     3121 acgaaaccgt taccattacg cccgacgaaa tcgaccgcat caaagggacc ggcagccgtc
     3181 ttgccatagg tacggcactt acacgcaaag aactgctgca cctgagcctg atgagcagcg
     3241 aaaaccgcgc cacccatgca ttgggcagaa cctaccccgg cggcatgggc gcatttgtcg
     3301 ccgccatgaa ccgcaaagcc caaagcctcg gtatgtacgg cagccgcttt tacgaaccga
     3361 ccggactcaa cttccaaaac gtttccaccg ccaaagacct gagccttatg gtcaacgccg
     3421 ccgcccaata tccgcaaatc cgcaccaact cgacttccaa ctacgcctcg gtacagacca
     3481 aaaacgggca gcagaactac aaaaactcca atgccctggt cagagaaggc atgtggaaca
     3541 tcgaattgca gaaaaccggc tacatacgcg aagcaggcag gtctatggtt gtcaaagcca
     3601 acattcaaaa tcaacccgtt accatcgtat tgctgaactc gcccacatcc gccacacgcg
     3661 tcaacgacgc ccgcaaaatc gaatcgtgga tgctgcagca acgctcctga catacaaatg
     3721 cccggcggaa aaccgcccaa acacaaaaaa aattggtaat ttttcctatt caaggctaca
     3781 attcgacacg cacagggcgt ctgcccgatt tcacaatcat aataacggag ttaaaaatat
     3841 gacagctaaa ggacaaatgt tgcaagatcc cttcctgaac gccctgcgta aagagcacgt
     3901 tccggtttcg atttacctgg tcaacggcat caaactgcaa ggtcaggttg aatctttcga
     3961 ccaatacgtc gttcttctga gaaacacttc cgtcacccaa atggtttaca aacacgccat
     4021 ttccaccatc gtaccggctc gctccgtcaa cctccaacac gaaaacagac cccaagccgc
     4081 accggcttcg acccttgtcc aagtggaaac cgtccagcag cctgccgaat aatccgcgcg
     4141 aagcatgacg tgtcatatct ttcaatacct taccggacaa cggtaaggta tttttatttt
     4201 cagacagcat ttaaaaatgt tattgcaaaa catccttcca ttcgcccatt gccttttgcg
     4261 gaaggcactt cccgaaggtg gcaatgcttt ggacggcacc gccggcaacg gacacgacac
     4321 ccttttcctc gcacaaaccg caggcatccg ggggaaagtg tgggcattcg acatccagcc
     4381 gcaagccctg agccgcactc gatgccgtct gaaagaagcg agatacgaga atgtgcaact
     4441 catcttagac ggacacgaaa acctgaaaca atatgtttca gaaccactaa atgccgccat
     4501 tttcaacttt ggctggctgc ccggcggaga taaaagcctt accacccata cggaaaccag
     4561 cattcccgcc ctttgcgcaa ccctctccct gctgaaagaa ggcggtatgc ttattgccgt
     4621 cctctatccg ggacacgaaa acggcaaaca ggaggcagaa gcaatcgaac aatgggcaaa
     4681 aaacctgcct caagaacagt ttgccgttct gcgttacggc tttaccaacc ggaaaaacaa
     4741 cccgccctat ctgttggcat ttgaaaagtt acgtcaaaaa taaatgtttg cggtaaaata
     4801 agccgattct aacccttatt ttgatacgag ccgaccatgc agtatctgat tgtcaaatac
     4861 agccaccaaa tcttcgttac cgttaccatt ttgttgttca acatccgctt tttcctgctt
     4921 tggaaaaatc ccgaaaaacc tttggcgggc ttgtggaaga cactgcccca cctcaacgac
     4981 acgatgctgc tgtttacggg attgtggctg atgaaaatca cccatttctc cccgttcaac
     5041 gcgccttggc tcggcacaaa aatcctgctt ctgctcgcct atatcgcatt gggtatgatg
     5101 atgatgcgcg cccgcccccg ctcggtcaaa ttctatgccg tttacctgct tgccatttgt
     5161 tgcgtcgcct gtatcgttta ccttgccaaa accaaagtcc tgccattctg aaacactgcc
     5221 atgaacaaca gacattttgc cgtcatcgcc ttgggcagca accttgacaa ccccgcacaa
     5281 caaatacgcg gcgcattgga cgcgctctcg tcccaccccg acatccggct tgaacaggct
     5341 tcctcactgt atatgaccgc gcccgtcggt tacgacaatc agcccgattt cgtcaatgcc
     5401 gtctgcaccg tctccaccga tatggacggc atctcgctgc tctctttgct caaccgtatc
     5461 gaggcggatt tcgggcgcga acgcagtttc cgaaacgcgc cgcgcacatt ggatttggac
     5521 atcatcgact ttgacggcct atccagcgac gacccccgcc tcaccctgcc gcatccgcgc
     5581 gcacacgaac gcagtttcgt catacgccct ttggcagaaa tcctccctga ttttgtttta
     5641 ggaaaacacg gaaaagttgc cgaattgtca aaacaactgg gcaatcaagg tatccgtctt
     5701 ttaccggata agtaattccg cacgcggatg ccgtctgaat gccggtttca gacggcattt
     5761 ttcctttgcc gccaacacgc gtgcaaaaaa atcgcccctt ggaaaagggg cgcaaaagga
     5821 acacaaacca ctaccaaaac tttaaatctg caacattgcc tgccgcatac tgtatccgac
     5881 aggatataaa gccctcacta aatcgtttcg agaaatccaa acttcttcat cgccgacaga
     5941 aaatctgcct ttctccggca ccagctccaa caaaaacggt tgaaccgccg tatgcagcct
     6001 gtccttacac cgccccagct ttctagacaa ggcggacagg gcacgcttat agacactatc
     6061 cttgcggtca agttcccgcg cactgccgac ccagctcaaa cgaaggttgc ggctttcatc
     6121 ctcaatcagc aaaatgcctg ttttgacttc ccccacctct ggctcgcatg aaagcgaaat
     6181 ataatatttg ccgtcgatgt tgacatacgc cgcctcatgc acctgacagt tgcagccgga
     6241 agtggcaagc agcgaataaa cagaatcccg atgcagtttc aaaatatcaa gggaaatctg
     6301 tttgaaaata ctttccggca tttttccctc ctttcgtctg ctgcgttgtt tactggattg
     6361 actgcattat acagacatct cccaatcttg caaatgataa ttgttcctat tttttaaaaa
     6421 atttataaat tattgatgga tatgtgaatt aattttaaga tttaaaatct ctttctcaaa
     6481 aaaacacaaa aatgccgtct gaaacgtgtt cagacggcat tggctgcaca gccagtccgt
     6541 ttaaaatttc acgcccttat gcagcgcgac gatgcccgca ctcatattgt gataatccac
     6601 gctgtcgaag cccgcatcca gcatcatctg tttcaaagtt tcctgatcgg ggtgcatacg
     6661 gatggattcg gcaagatact ggtaactctc cgcatctttc gcaatcagcc tgcccatgac
     6721 cggcagcagc ttgaacgaat aaaaatcata cgcgccttcg agtggcttgt agattttgga
     6781 aaactccaac accagcaacg tgccgccagg tttcaaaaca cgatacatct ctttcagcgc
     6841 ggcatcttta tgcgtcatgt tccgcaagcc gaacgccacg gaaactaagt tgaaataatt
     6901 gtcagggaaa ggcagttttt ccgcatcggc aagcgacacg ggcaaaatca tgccttcgtt
     6961 caacagacgg tcgcgcccga cggtcagcat agaggaatta atatcggtca gccaaacctc
     7021 gccttccttg ccgacccgtt tcgcccaacc gcgcgacaaa tcgcccgtac cgcccgcaat
     7081 gtccaacact ttatcgcctt ttttcaggtg cgccgtgttg atggtgaaat gcttccacac
     7141 cctgtgcagc cctgccgaca tgacatcatt cataatgtcg tagtttttgg cgacggagtg
     7201 gaacacttcc gccacttttc cggctttctc atcttcgttg accgtactga atccgaaatg
     7261 cgttttctgt ccgcccatat tctaaccacc tccctgatgc cgccctacgg catcccaaac
     7321 ttaacaatct gattgctttt caaaacgcga cgcgcccgcc gccgccaatt tgtccaaata
     7381 ttcctgccac atcgcatcgt atccgtatgc cagtctgtgc agatacgccc aatcgtaaag
     7441 accgctgtcg tgcccgtccg aaaaactgat tttcagcgcg tactgtccga caggctgcaa
     7501 atccgtaatt tgcacatctg ccttaccggt ctgcaaaaca tcctgtccca caccgtgtcc
     7561 gcgcacttcc gcactcggcg aatagacgcg taaaaattcg gcaggcagat ttttaggttc
     7621 gtccccataa gtcaaaacca acacggtacg gtttttcaac aaacggattt caacaggaat
     7681 attattcaaa aaacacctcg gttcggcata caatatccgg caggcgcagg cgtgccttca
     7741 aacggcgcgt attttaacag ctttatcccg ataccgatat tcaaacccac actttaaacg
     7801 gcattgatat ggacaatctc gtatgggacg gcgttcccga catccgcaca ctcgaccaaa
     7861 ccatccgcaa acacgcacac ccgctcaacc tgattgtctg cctccccgat aatcagattc
     7921 ccgattttca aaccgcacaa gatgcttcgg acgcggaatg ccgtctgaag caccgtttgg
     7981 atcaggcaac gcagtgcctc cagttcgaca gcatcaacct catcgaacac atcctgcccg
     8041 atgtccgctt ctggctggtt cccccttcac gcacccgccg cctgcacgaa cacttccacc
     8101 acatttcctg gcagaccgaa gccatcccgc aaaccgaaag caaacccgac aaaccctggt
     8161 ttgcacttcc acaaacatcc gaacggcaaa aaccggaaca catcctcgtt atcggctcgg
     8221 gcatatccgg cgcggcaacc gcccacgcct tagcatcaca cggcatttcc gttaccgtat
     8281 tggaagcccg aaaagccgcc caagccgcca gcggcaaccg ccaagggctg ctctacgcca
     8341 aaatctcgcc gcacgacacc gaacaaaccg aactgctgct tgccggctac ggctacacca
     8401 aacgcctgct cggacacatc ctgcccgaat ccgaaacctg gggcggcaac ggcatcatcc
     8461 acctcaatta cagccgcacc gaacaacaac gcaatcacga attgggtttg caaaaacacc
     8521 ataaccacct ctaccgcagc atcacgccgg cagaagccga aaaaatcgcc ggcatcccgc
     8581 tgaacacgcc ctacgccgaa ccattatgcg gactgttttg gcagtacggc gtatggctca
     8641 atccacccgc attcgtccgc accctcctca accatccgct cattggacta cacgaagaca
     8701 caccgttaac cgacatttcc cacgacgggg aaaagtggat tgcaagcacg ccaaacggca
     8761 tattttccgc cacacacatc atctactgca ccggcgcgca cagccctcgc ctgcccgaaa
     8821 ccaacctcgc cgccctgcct ctcaggcaaa tacgcggaca aaccggcctc acaccgtcca
     8881 ccccgttttc cgaacaactg cgttgcgccg tttcaggcga aagctacatc agcccgtcgt
     8941 ggcacggact gcactgctac ggcgcgagtt ttattcccaa cagcagccat accggatgga
     9001 acgaagccga agaagcctca aaccgccaag cattggcaca ccttaacccc gccctttccg
     9061 aatcattgtt tgccgccaac ccaaaccccc aaaaacacca agggcacgcc gccatacgct
     9121 gcgacagccc cgaccacctt cccctagtcg gcgcactcgg cgacattgcc gccatgcggc
     9181 agacctacac caaactcgcg ctggacaaaa actaccgcat cgacacccca tgcccatacc
     9241 tgcctaatgc ctacgtcaac accgcgcacg gcacccgcgg actcgccacc gcccccatct
     9301 gcgccgccgc cattgcagcc caaatcctag gcttgcccca tcccttttca caacgcctgc
     9361 gccacgccct acaccccaac cgcaccatca tccgcgccat cgtcagaagg aaggatctaa
     9421 ccccttaagc ctttgccgca tgccgtcccg accacagaaa atcatattca aataaacata
     9481 ccaatcctga cggtaaaata tcgaaaacac ccataacgtt ttcttcccaa aataaggagt
     9541 aaggaatgcc taacaaattg cctttgctgt ccaagatgaa tgttccgtaa cattcgaaga
     9601 cttccttaac cctgccagcc gtttcggttt ctgtaccccc tgttagataa ggaaggaatg
     9661 aaaaagccct gttgattgta tgaagtaaag ggcgttaatt tttgttaatc ttcccttctc
     9721 aggaactcaa tatataagga tgttaatttt tatttccctt ctcgagg
//
LOCUS       DAWKJW010000057         9722 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.057, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000057 DAWKJW010000000
VERSION     DAWKJW010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9722)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9722)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9722
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.057"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(14..430)
                     /gene="dksA"
                     /locus_tag="WJJ54_001029"
     CDS             complement(14..430)
                     /gene="dksA"
                     /locus_tag="WJJ54_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEZ7341908.1"
                     /translation="MAKLTEQDILNWNGPEDDYMNDEHLAFFRELLVKMQDELIENAS
                     ATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCA
                     DTGEPIGLKRLLARPTATLSVESQERRERMKKQFAD"
     gene            complement(577..1368)
                     /locus_tag="WJJ54_001030"
     CDS             complement(577..1368)
                     /locus_tag="WJJ54_001030"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEZ7341909.1"
                     /translation="MNVYFLGGGNMAAAVAGGLVKQGGYRIHIANRGAEKRERLQKEL
                     GVETSETLPELHSDDVLILAVKPQDMEAACKNIRTNGALVLSVAAGLPVDTLSRYIGG
                     TRRIVRVMPNTPGKIGLGVSGMFAEAEVSETDRRIADRIMKSVGLTIWLEDEAQMHGI
                     TGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVTLAEQTGEDFEKLQ
                     KNVTSKGGTTHEAVEAFRRHRVAEAISEGVCACVRRSQEMERQYQ"
     gene            complement(1417..1824)
                     /locus_tag="WJJ54_001031"
     CDS             complement(1417..1824)
                     /locus_tag="WJJ54_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEZ7341910.1"
                     /translation="MEIRAIKYTAMAALLAFTVAGCRLAGWYECSSLSGWCKPRKPAA
                     IDFWDIGGESPPSLEDYEIPLSDGNRSVRANEYESAQQSYFYRKIGKFEACGLDWRTR
                     DGKPLIETFKQGGFDCLEKQGLRRNGLSERVRW"
     gene            complement(1824..2510)
                     /locus_tag="WJJ54_001032"
     CDS             complement(1824..2510)
                     /locus_tag="WJJ54_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEZ7341911.1"
                     /translation="MTVLQERYCEVSDRIGKLVLQAGRKPHSVSLIAVGKTFPSDGIR
                     EVYAAGQRDFGENYIQEWYGKTEELADLTDIVWHVIGDVQSNKTKFVAERAHWVHTVC
                     RLKTAVRLSEQRPSSMPPLQVCIEVNIAGEAVKHGVAPEEAVALAVEVAKLPNIVVRG
                     LMCVAKANSSETELKVQFQTMRKLLADLNAAGVKADVLSMGMSDDMPAAIECGATHVR
                     IGSAIFGKRG"
     gene            2630..3673
                     /locus_tag="WJJ54_001033"
     CDS             2630..3673
                     /locus_tag="WJJ54_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEZ7341912.1"
                     /translation="MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSA
                     EEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNTGRGPAAVFRTIPST
                     VLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
                     PIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEMRDPETIGLALTAA
                     ETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNG
                     RVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLVRQGLIAPEV
                     ARRRAQNSESMSF"
     gene            3836..5062
                     /locus_tag="WJJ54_001034"
     CDS             3836..5062
                     /locus_tag="WJJ54_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEZ7341913.1"
                     /translation="MNTDNLHDILDEMVQVYSQKKQSRSETPAEIGAHFHPLLDRLCE
                     TAEAQNASDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEIFRRD
                     GEINYSVQSRSGTRYRANAYHSQGSAGLVLRRINHVIPQMQELGLPEKLKDLAVAPRG
                     LLIIVGPTGSGKSTTMATMLEHRNKTLPSHIVTIEDPIEFIYKPRRCIFTQREIGVDT
                     INWQTAVQNAMRQSPDVVCIGEVRSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERI
                     LNFYPKEQHNQILIDIALNLTGIICQRLALKQDKTGRTAVVDLLINTPAIQDFILKGD
                     LMNISKIMETAKTDGMQTMDQNLFELYRHGIISYEEALRQSVSANNLRLHIQLHKEGK
                     TPELLYDRVNGLNLIS"
     gene            5348..7498
                     /gene="yccS"
                     /locus_tag="WJJ54_001035"
     CDS             5348..7498
                     /gene="yccS"
                     /locus_tag="WJJ54_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HEZ7341914.1"
                     /translation="MKTPLLKPLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGII
                     AGGLVDLDNRLTGRLKNIITTVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGA
                     VGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYSTAIILFQIILPHRP
                     VQESVANAYDALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVITAFNQCRSALFY
                     RLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQ
                     GQACRNTAQALRASKDYVYSKRLGRAIEGCRQSLRLLSDGNDNPDIRHLGRLLDNLGS
                     VDQQFRQLQHNGLQAENDRMGDTRIAAIETGSLKNTWQAIRPQLNLESGVFRHAVRLS
                     LVVATACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVGSLVP
                     YFTPSVETKLWIVVVSTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRI
                     IDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSNGAYLEKITERLKSGETGDDVE
                     YRATRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRS
                     EMHEECSPDFTAQFHLAAEHTAHIFQHLPETEPDDFQTALDTLRGELDTLRTHSSGTQ
                     SHILLQQLQLIARQLEPYYRAYRQIPHRQPQNAA"
     gene            complement(8029..>9722)
                     /locus_tag="WJJ54_001036"
     CDS             complement(8029..>9722)
                     /locus_tag="WJJ54_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pilus assembly/adherence protein PilC"
                     /protein_id="HEZ7341915.1"
                     /translation="FSNDNEFVKFNKESDKYSQRYRIRENGNNSKRDLGDIVNSPIVA
                     VGEYLATSANDGMVHIFKKGNGDARNYSLKLSYIPGTMPRKDIESKDSTLAKELRAFA
                     EKGYVGDRYGVDGGFVLREVERGGKKHVFMFGAMGFGGRGAYALDLTKADDNDPTKAS
                     LFDVKDNGNNGNNGNNRVELGYTVGTPQIGKTHNDKYAAFLASGYATKDVNSNDNTTA
                     LYVYDLENNGTLIRKIEVKDGKGGLSSPTLVDKDLDGTIDIAYAGDRGGKMYRFDLSS
                     QSPDQWTVRPIFEGTKPITSAPAISQLKDKRVVIFGTGSDLSEEDVDNTDEQYIYGIF
                     DDDTATTGSVNFSGSGGGLLEQVLSRDNDNKTLFLTDYKRSDGSGSKGWVVKLEAGQR
                     VTVKPTVVLRTAFVTIHKYTGTDKCGAETAILGINTADGGKLTKKSARPIVPEANQAV
                     AQYSGHKKGTNGKSIPIGCMEKNGGTVCPNGYVYDKPVNVRYLDEKKTDGFSTTADGD
                     AGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPTCGMKRISWREVFY"
BASE COUNT         2326 a         3109 c         2158 g         2129 t
ORIGIN      
        1 ttgtttgccg ccatcagtcg gcaaactgtt ttttcatcct ctctcggcgt tcttgggact
       61 caacagataa agtggctgtc gggcgtgcca gcagccgctt cagaccgata ggctctcccg
      121 tatcggcaca gaatccataa tccccttcat caatattgcg gatggtcgcc tgtattttac
      181 tgagaagttt tcgttcccga tcgcgggtac ggagttccaa tgcgtactct tcttcctgtg
      241 tggcacggtc ggcaggatcg ggggctgatt cgtgttcttg gagatgccct gtcgtagcgg
      301 aagcattttc gatgagttcg tcttgcattt ttaccagcaa ttcgcggaaa aaagccaaat
      361 gctcgtcatt catataatcg tcttccggcc cgttccaatt caaaatatct tgttctgtca
      421 gctttgccat aatgtatatc ctctcggttc accgaaaaaa acaaagcacc acaaagtggc
      481 tttattcctt tgatttttat aaggcttatt gcctaaggcg tttttgaaaa cgcgcatcat
      541 aacacgtttt ggattggttt ttttattttc tttacattat tgatattgcc gttccatttc
      601 ctgcgaacgg cgcacacagg cacaaacgcc ctcgcttatg gcttcggcga cacgatgccg
      661 cctgaaagct tccacggctt cgtgggttgt cccgcctttt gacgttacat ttttttgaag
      721 cttctcgaaa tcttcacccg tctgctcggc aagggtaacc gctcctttaa acgttgccag
      781 actgagcgcg cgtgcttctg ccatatcaaa cccttgtcgg atggcggcat tttgcaatgc
      841 gtccagcaga taaaacacat aagccggtcc gctgccgctg atgccggtaa tgccgtgcat
      901 ttgcgcttca tcttccaacc aaatggtcaa accgactgat ttcatgattc gatcggcaat
      961 cctgcggtct gtttccgata cttccgcttc ggcaaacata ccggatacgc ccagcccgat
     1021 ttttccgggt gtattcggca taacccggac aatgcggcgt gttcccccaa tgtaacggct
     1081 gagcgtatcg accggcaatc cggctgcgac agaaagcacc aatgcgccgt tggtgcggat
     1141 atttttgcac gcggcttcca tatcctgcgg cttgacggca aggattaaaa catcgtcgga
     1201 atgaagctcc ggcaaggttt cagaagtttc gacccccaac tctttttgca aacgttcgcg
     1261 cttttccgca ccccggttgg caatatggat gcggtaaccg ccttgtttga ccaatccgcc
     1321 cgcaacggca gccgccatat tgccgccgcc gagaaaataa acattcatta tttctaccct
     1381 attcaaaatt accttactaa attcattccc aattttttac catcggacgc gctcggacag
     1441 accgttgcgc cgcaacccct gcttttccaa gcagtcaaat cctccctgtt tgaacgtctc
     1501 aatcaaaggt ttgccgtcac gcgtacgcca atccagcccg caggcttcaa acttccctat
     1561 tttcctgtaa aagtaagatt gttgtgcgga ttcatattca tttgccctga cggaacgatt
     1621 gccgtctgaa agcggtatct cgtagtcctc taaagacggc ggactctcgc cgccaatatc
     1681 ccaaaaatcg atggcggcag gttttctcgg cttacaccag ccggacaggg acgaacactc
     1741 ataccaacct gccaaccggc agcctgcaac cgtaaatgca agcaacgcag ccattgccgt
     1801 atattttatt gcccgaattt ccatcagccc cttttcccga aaatcgcgct gccgatacgg
     1861 acgtgtgtcg caccgcactc aatggcggca ggcatatcgt ccgacatccc catagacagc
     1921 acgtctgcct taacgccagc cgcattgagg tcggcaagca gtttccgcat cgtttgaaat
     1981 tgcaccttca actccgtttc actgctgtta gctttggcaa cacacatcag tccgcgtacg
     2041 acgatattcg gcagcttcgc cacttccaca gcaagcgcga ctgcttcttc gggcgcgaca
     2101 ccgtgcttca ccgcctcgcc cgcaatgttc acctcaatac acacctgcaa aggcggcatt
     2161 gaggaaggac gctgttcgct caaccggaca gcggttttca gacggcatac ggtatgcacc
     2221 caatgcgcgc gttcggcgac aaacttggtt ttgttggact gcacatcgcc gatgacgtgc
     2281 cacacgatgt cggtcaaatc cgccaactct tccgttttgc cgtaccactc ctgaatatag
     2341 ttctcgccga aatcacgctg tccggcggcg taaacttcgc ggatgccgtc tgaagggaaa
     2401 gtcttaccga cggcaatcag gctgacggaa tgcggcttcc ttcccgcctg cagaaccaat
     2461 tttccgatac ggtcggacac ctcacaataa cgttcttgca acaccgtcat agattatccc
     2521 ctaattaaaa atgattaaac agttgaaacc cctccagtca gggcggtaca atcaaggttg
     2581 ttagaaccat tccaaccaat cgaaacatta tactaaacag agccgcatta tgcagattac
     2641 cgacttactc gccttcggcg ctaaaaacaa agcatccgac cttcacctga gttcgggcat
     2701 atcccctatg attcgggttc acggcgatat gcggcgcatc aaccttcccg aaatgagcgc
     2761 ggaagaagtc ggtaatatgg taacttcggt gatgaacgac caccagcgga aaatctacca
     2821 gcaaaacttg gaagtcgact tctcgttcga actgcccaac gtcgcccgat tccgcgtcaa
     2881 cgccttcaac accggccgcg gtcccgccgc cgtattccgt accattccca gcaccgtctt
     2941 atcgctggaa gaattgaaag ccccgagcat tttccaaaaa atcgcagaat cgccgcgcgg
     3001 catggtattg gttaccggcc ctaccggttc gggcaaatcg accacgcttg ccgcgatgat
     3061 caactacatc aacgaaaccc agccggcaca catcctgacc atcgaagacc cgatcgaatt
     3121 cgtccaccaa agcaaaaaat ccctgattaa ccagcgcgag ctgcaccagc acaccctcag
     3181 cttcgccaac gcgctgagtt ccgcattgcg cgaagacccc gacgttatcc ttgtcggcga
     3241 gatgcgcgac ccagaaacca tcggcttggc tctgaccgcc gccgaaaccg gacacttggt
     3301 tttcggcacg ctgcacacga ccggcgcagc aaaaaccgtc gaccgtattg tggacgtatt
     3361 cccggcggga gaaaaagaaa tggtgcgctc tatgctgtcc gaatcgctga ccgccgtcat
     3421 ctcccaaaac ctgctgaaaa cgcacgacgg caacggccgt gtcgcctcgc acgaaatcct
     3481 gattgccaac cccgccgtcc gcaacctcat ccgcgaaaac aaaatcacgc agattaactc
     3541 cgtcctgcaa accgggcagg cgagcggtat gcagacaatg gaccaatcgc tgcaatcgct
     3601 ggtgcgccaa gggctgatcg caccggaagt cgcacgcaga cgcgcgcaaa acagcgaaag
     3661 tatgagtttc tgacacacaa ccgccttccg gccataccgg cgggaaaaca aggcgcaaac
     3721 acgcggggcg ggacgcagca tcccgcccgg ctacctttcc gaacaagaag cgtccgcctt
     3781 cctgttgaaa cctgccgccg caaactgcaa ggcttaaacc gaaaagaagc taacgatgaa
     3841 taccgataac ctgcacgaca tcttggacga aatggttcaa gtgtattctc aaaaaaaaca
     3901 aagccgatcc gaaaccccgg ccgaaatcgg cgcacacttc cacccgctgc tcgaccgcct
     3961 gtgcgaaacc gcagaagcac aaaacgcgtc cgacatcctt atcagcaaag gattcccgcc
     4021 ctcgttgaaa atcaacagcg cattaacccc gcagccgcaa aaggcgctga cgggcgagga
     4081 aaccgccgcc atcgccgcat cgacgatgaa cgccgaacaa tcggaaatat tccggcgcga
     4141 cggcgaaatc aactactccg tccagtcgcg cagcggcacg cgctaccgcg ccaacgccta
     4201 ccacagccaa ggcagcgcag gtttggtttt gcggcgcatc aaccacgtca tcccgcaaat
     4261 gcaggaattg ggtctgcccg aaaaactcaa agacctcgcc gtcgcaccgc gcgggctgct
     4321 gattatcgtc gggcctaccg gttcgggcaa atccaccacg atggcgacta tgctcgaaca
     4381 ccgcaacaaa accctgccca gccatatcgt taccatcgaa gacccgattg agtttatcta
     4441 caaaccgcgc cgctgcatct ttacccagcg cgaaatcggc gtcgacacca taaactggca
     4501 gacggcggta caaaacgcta tgcgccagtc ccccgacgtg gtctgcatcg gcgaagtccg
     4561 cagcagggaa agtatggaat acgcgatgca gctcgcccaa accggccacc tgtgcatttt
     4621 tacgctccac gccaacaccg cgccgcagtc gctcgaacgc atactcaact tctaccccaa
     4681 agaacagcac aaccaaatac tgatcgacat cgccctcaac ctgaccggca tcatctgcca
     4741 acgcctcgcc ctcaaacaag acaaaacggg caggacggcg gttgtcgact tgctcatcaa
     4801 cacgcccgcc atccaagact tcatcctgaa gggcgacctg atgaacatca gtaaaatcat
     4861 ggaaaccgcc aaaaccgacg gaatgcagac gatggatcaa aaccttttcg aactgtaccg
     4921 tcacggcatc atcagttacg aagaagccct gcgccagtcc gtttccgcca acaacctgcg
     4981 attgcacatc caactgcaca aagaaggcaa aacgcccgaa ctcctttacg acagggtcaa
     5041 cggtctcaac ctcatttcct gatccgcaaa acccaatgcc gtctgaaaac cgcatccccg
     5101 ttttcagacg gcatgatttt atccgcccca ttcatgtgct acactttata gtggattaaa
     5161 tttatagtgg attaacaaaa atcaggacaa gacgacgaag ccgcagacag tacaaatagt
     5221 acggaaccga ttcactcggt gcttcagcac cttagagaat cgttctcttt cagctaaggc
     5281 gaggcaacgc cgtactggtt tttgttaatc cactatattc acttcataac aataaaccgg
     5341 taaaaccatg aaaaccccac tcctcaagcc tctgctcatt acctcgcttc ccgttttcgc
     5401 cagtgttttt accgccgcct ccatcgtctg gcagctaggc gaacccaagc tcgccatgcc
     5461 cttcgtactc ggcattattg ccggcggcct tgtcgatttg gacaaccgcc tgaccggacg
     5521 gctgaaaaac atcatcacca ccgtcgccct gttcaccctc tcctcgctca cggcacaaag
     5581 caccctcggc acagggctgc ccttcatcct cgccatgacc ctgatgacct tcggctttac
     5641 cattttaggc gcggtcgggc tgaaataccg caccttcgcc ttcggcgcac tcgccgtcgc
     5701 cacctacacc acacttacct acacccccga aacctactgg ctgaccaacc ccttcatgat
     5761 tttatgcggc accgtactgt acagcaccgc catcatcctg ttccaaatca tcctgcccca
     5821 ccgccccgtc caagaaagcg tcgccaacgc ctacgacgca ctcggtggct acctcgaagc
     5881 caaagccgac ttcttcgacc ccgatgaggc agcctggata ggcaaccgcc acatcgacct
     5941 cgccatgagc aacaccggcg tcatcaccgc cttcaaccaa tgccgttccg ccctgtttta
     6001 ccgccttcgc ggcaaacacc gccacccgcg caccgccaaa atgctgcgct actacttcgc
     6061 cgcccaagac atacacgaac gcatcagctc cgcccacgtc gactaccaag agatgtccga
     6121 aaaattcaaa aacaccgaca tcatcttccg catccaccgc ctgctcgaaa tgcagggaca
     6181 agcctgccgc aacaccgccc aagccctgcg cgcaagcaaa gactacgttt acagcaaacg
     6241 cctcggccgc gccatcgaag gctgccgcca gtcgctgcgc ctcctttcag acggcaacga
     6301 caatcccgac atccgccacc tcggccgcct gctcgacaac ctcggcagcg tcgaccaaca
     6361 attccgccaa ctccagcaca acggcctgca ggcggaaaac gaccgcatgg gcgacacccg
     6421 catcgccgcc atagagaccg gcagcctcaa aaacacctgg caggcaatcc gtcctcagct
     6481 aaacctcgaa tcaggcgtat tccgccatgc cgtccgcctg tccctcgtcg ttgccaccgc
     6541 ctgcaccata gtcgaagccc tcaacctcaa cctcggctac tggatactgc tgaccgccct
     6601 tttcgtctgc cagcccaact acaccgccac caaaagccgc gtccgccagc gcatcgccgg
     6661 taccgtactc ggcgtaatcg tcggctcgct cgtcccctac ttcaccccgt ctgtcgaaac
     6721 caagctttgg atcgtcgtcg tcagcaccac cctgttcttc atgacccgca cctacaaata
     6781 cagtttctcc accttcttca ttaccattca agccctgacc agcctctccc tcgcaggttt
     6841 ggacgtatac gccgccatgc ccgtacgcat catcgacacc attatcggcg catcccttgc
     6901 ctgggcggca gtcagctacc tgtggccaga ctggaaatac ctcacgctcg aacgcaccgc
     6961 cgcccttgcc gtatgcagca acggtgccta tctcgaaaaa atcaccgaac gcctcaaaag
     7021 cggcgaaacc ggcgacgacg tcgaataccg cgccacccgc cgccgcgccc acgaacacac
     7081 cgccgccctc agcagcaccc tttccgacat gagcagcgaa cccgcaaaat tcgccgacag
     7141 cctgcaaccc ggctttaccc tgctcaaaac cggctacgcc ctgaccggct acatctccgc
     7201 cctcggcgca taccgcagcg aaatgcacga agaatgcagc cccgacttta ccgcacagtt
     7261 ccacctcgcc gccgaacaca ccgcccacat cttccaacac ctgcccgaaa ccgaacccga
     7321 cgactttcag acggcattgg atacactgcg tggcgaactc gacaccctcc gcacccacag
     7381 tagcggaaca caaagccaca tcctcctcca acagctccaa ctcatcgccc gacagctcga
     7441 accctactac cgcgcctacc gccaaattcc gcacaggcag ccccaaaacg ccgcctgaaa
     7501 aagtttcggc attttgtaag agagagcaga ttgtcagaca ggttgcaaga tagtggataa
     7561 agctttgcgc agggtaaatg cgtagcaact gaaccgtcat tcccacgaat ctacattccg
     7621 tcattcccac gaaaacagaa aaccaaaaac agaaacctaa aatcccgtca ttcccacgaa
     7681 cctacattcc gtcattccca cgaaaacaga aaaccaaaaa cagaaaccta aaatcccgtc
     7741 attcccacga acctgcatcc cgtcattccc acgaaagtgg gaatccagaa tctctaaagc
     7801 ttcagctaac ctttgaatat tgctgttgtt ctaaggtcta gattcccgcc tgcgcgggaa
     7861 tgacggcatc ggtttgacgg tatttaattg aattgtggaa attgatggat tcagtgagat
     7921 tggcgagatg aagcctaccc tatagcccgc cttttacgaa cccgcccctc ccgaaaaacg
     7981 caaaaaatgc cgtccgaaaa cctttcggac ggcattttcg cgtgcaaatc agtagaagac
     8041 ttcacgccag ctgattcgtt tcataccgca cgtcgggccg gtaatgtcca agctgtccaa
     8101 atcgttcatc agcagggtgc gcacaccttt tccggagaag caccggttat tgcgggcggg
     8161 ttttttaccc tctttgaatg ttccgctgcc gcccgcatcg ccgtctgccg ttgttgaaaa
     8221 tccgtctgtt ttcttttcat ccagataacg cacattaacc ggtttgtcgt aaacatatcc
     8281 gttcgggcag acggttcccc cgtttttttc catacaacct atagggatgg atttgccgtt
     8341 ggtgcctttc ttatgaccgg aatattgcgc gacagcctga ttggcttccg gcacaatcgg
     8401 gcgcgcgctt ttcttggtca gcttgccgcc gtcggcggta ttgatgccca aaatggcggt
     8461 ttccgcgccg catttgtccg tacccgtata tttatggatg gttacaaagg cggtacgcaa
     8521 taccacggtc ggtttgacgg taacgcgctg tccggcttcc aatttcacta cccacccttt
     8581 gctgcccgat ccgtcggatc gcttgtaatc ggtcaggaat aaggttttat tgtcgttatc
     8641 cctactaagc acttgctcaa gcagcccgcc tcccgaaccg ctgaagttta cagaacccgt
     8701 cgtcgccgta tcgtcgtcga agataccgta aatatattgt tcgtccgtat tgtccacatc
     8761 ctcctcactc aaatcgctgc ccgtgccgaa gatgaccacg cgtttgtctt tcagttggga
     8821 aatggcgggc gcggaagtaa tcggttttgt gccttcaaaa atagggcgta cagtccattg
     8881 atcaggactt tgactgctca aatcaaagcg gtacattttc ccgccgcgat cgccggcata
     8941 ggcgatatcg attgtgccgt ccaaatcttt atccaccagc gtgggggacg aaagcccgcc
     9001 cttgccgtcc ttcacttcga tttttctaat cagcgtaccg ttgttttcca aatcatatac
     9061 atacagcgcg gttgtattgt cgttgctgtt aacgtcttta gtcgcataac cagaggcgag
     9121 gaaggcggcg tatttgtcgt tgtgggtttt gccgatttgc ggcgtgccga cggtgtagcc
     9181 taattccacg cgattattgc cgttattgcc attattgccg ttatctttta catcaaacaa
     9241 agaggctttt gtcgggtcat tgtcgtcggc tttggtcaaa tccaaggcgt atgcgcctct
     9301 gccgccaaag cccatcgcgc cgaacataaa cacgtgtttt ttcccgcccc gttcgacttc
     9361 gcgcaagaca aagccgccgt ccacgccgta gcggtcgccc acatagcctt tttcggcaaa
     9421 ggcgcgcagc tctttggcaa gggtggagtc tttgctttca atatccttgc gcggcatcgt
     9481 gccagggatg tagctgagct tcagactata gttgcgcgcg tccccgttgc cttttttgaa
     9541 gatatgcacc atcccgtcgt tggcggaagt agccaaatac tcgccgaccg ccacgatggg
     9601 gctgttgacg atgtcgccca aatcacgctt gctattgttg ccgttttcgc ggatgcggta
     9661 tctttggctg tatttgtctg attctttgtt gaattttaca aattcattgt cattactaaa
     9721 ac
//
LOCUS       DAWKJW010000058         9652 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.058, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000058 DAWKJW010000000
VERSION     DAWKJW010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9652
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.058"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..381)
                     /locus_tag="WJJ54_001037"
     CDS             complement(<1..381)
                     /locus_tag="WJJ54_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ7341916.1"
                     /translation="MNILLLDGGKAFGHSHGGLNRTLHKKAKEVLTALGHNVQETVID
                     AGYDVEAEIEKFVWMDAVIWQMPGWWMHEPWTVKKYIDGVLTAGHGKLYQSDGRHSVN
                     PTEGYGTGGLLQGKKHMLSLTWNAP"
     gene            620..1519
                     /gene="crgA"
                     /locus_tag="WJJ54_001038"
     CDS             620..1519
                     /gene="crgA"
                     /locus_tag="WJJ54_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151940473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator CrgA"
                     /protein_id="HEZ7341917.1"
                     /translation="MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEK
                     LGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLRVDSAMP
                     MVLHLLAPLATKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF
                     DSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPSSLNTWAVLDAQGNPYKISPHF
                     TASSGEILRSLCLSGCGIACLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDK
                     AVNLRLRVFLDFLVEELGNNLCG"
     gene            complement(1743..4958)
                     /gene="carB"
                     /locus_tag="WJJ54_001039"
     CDS             complement(1743..4958)
                     /gene="carB"
                     /locus_tag="WJJ54_001039"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEZ7341918.1"
                     /translation="MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     ILVNSNPATIMTDPEMADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDL
                     ARNGVLAKYNVELIGATEDAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEM
                     EVVRDKNDNCIIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAVNPENGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDE
                     LRNDITGGKTPASFEPSIDYVVTKIPRFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQ
                     ESFQKALRGLETGLCGFNPRSSDKAEIRRELANPGPERMLFVADAFRAGFTLEEIHEI
                     CAIDPWFLAQIEDLMKEEKAVSDGILSDLDFAALRRLKRKGFSDKRLAQLLNVSEKEV
                     REHRYALKLHPVYKRVDTCAAEFATETAYLYSTYEEECEARPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLR
                     QPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSE
                     DSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEE
                     IQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRASRTVPFVSKATGVPLA
                     KVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGV
                     GASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERVIKTAKNFQALGYGICATRGTA
                     QYLTEHGLIVQTINKVPEGRPHIGDALKNGEIALVVNTVSNDPQSVSDSHIIRQSALQ
                     QRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELHGRLKNRN"
     gene            complement(4965..5513)
                     /locus_tag="WJJ54_001040"
     CDS             complement(4965..5513)
                     /locus_tag="WJJ54_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341919.1"
                     /translation="MRTIFFSGSRSISRLNPQIRERINNILSNNFDIVIGDANGADKA
                     IQKFLQEQDYANVHIYFSGKIYRNNVGNWQFVQVDSKGTGRVFYTAKDKKMAEIADYG
                     FILWDGKSIGSLNNIAELLQLNKPSLVYHSQTKEFFKIKSSADLENILSNIEDDVLAS
                     ILEKGNTFLKSYVTKQPSLIQE"
     gene            complement(5516..6079)
                     /locus_tag="WJJ54_001041"
     CDS             complement(5516..6079)
                     /locus_tag="WJJ54_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEZ7341920.1"
                     /translation="MAIELNGNWTKGFALDHHMQKSILLGYDELGHPHFDSKRSVIGE
                     WVYQLKYRNQTQNVSLLVDYILQKFSGLESINLIVPAPFTTERINQPVQLIAKELSDR
                     LNIPYSPILRKSSSHTPLKNIEEKSEKLEILNNSITIDNIDLSNKNILVIDDLFDSGA
                     TLEISTEKLFSKNARSVIVLAMTKTRG"
     gene            complement(6930..7319)
                     /locus_tag="WJJ54_001042"
     CDS             complement(6930..7319)
                     /locus_tag="WJJ54_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HEZ7341921.1"
                     /translation="MNPHEKLLTTDNPILRQRAKAMRQEMSGAEAKLWQHLRAGRLNG
                     YKFRRQQPMGNYIVDFMCVTPKLIVEADGGQHTEQAAYDHARTAYLNSLGFTVLRFWN
                     HEILQQTNDVLTEILLVLQELEKQAAR"
     gene            complement(7611..7736)
                     /locus_tag="WJJ54_001043"
                     /pseudo
     CDS             complement(7611..7736)
                     /locus_tag="WJJ54_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687282.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(7782..8915)
                     /gene="carA"
                     /locus_tag="WJJ54_001044"
     CDS             complement(7782..8915)
                     /gene="carA"
                     /locus_tag="WJJ54_001044"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEZ7341922.1"
                     /translation="MSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILT
                     DPSYCKQIVTLTYPHIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYL
                     VRNKTVAIADIDTRRLTTLLREKGAQGGAILTGADATIKKAQELIAAFGSMVGKDLAK
                     EVSCTETYEWTEGEWALGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPA
                     QTSAEDVLALNPDGVFLSNGPGDPEPCTYAIKAVQKLMESGKPIFGICLGHQLISLAI
                     GAKTLKMRFSHHGANHPVQDLDSGKVVITSQNHGFAVDADTLPANARITHKSLFDNTL
                     QGIELTDKPVFCFQGHPEASPGPQDVGYLFDKFIGNMKAAKRA"
     gene            complement(9500..>9652)
                     /locus_tag="WJJ54_001045"
     CDS             complement(9500..>9652)
                     /locus_tag="WJJ54_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341923.1"
                     /translation="IDPAGKRSGKNNRCFSQKGVRTLLMNDLDSLDITGPTCGMKRIS
                     WREVFF"
BASE COUNT         2182 a         2446 c         2478 g         2546 t
ORIGIN      
        1 cggcgcattc caagtcagtg aaagcatatg ttttttgcct tgcaacaagc cgcctgtgcc
       61 gtagccctca gtcggattga cgctgtgtct gccgtcgctt tggtagagtt tgccgtgtcc
      121 agcggttaat actccgtcta tgtatttttt cactgtccaa ggctcgtgca tccaccagcc
      181 cggcatctgc caaatcacag catccatcca aacgaatttt tcgatttctg cctcaacatc
      241 atagccggca tcaatcacgg tttcttgaac attgtgtccg agcgcggtca aaacttcttt
      301 cgcttttttg tgaagcgtgc ggtttaaccc gccgtgagaa tgtccgaacg ccttgccgcc
      361 gtctaataat aaaatattca tttgttacct cgtttgtgaa ttgatgaatg tattgttccg
      421 ttttacttta taatttaaaa gtgcaaaaat aagaaaacac ttttgcgtca aatgaaataa
      481 tcagatgttt caacacacgg gatgacacat aaagcgtctc cctatgtgcc gtcctgattc
      541 ggaaggggtt acacccctcc caaataaagt ctgatcctgc cgccctaaag ggcggggttc
      601 caaccgaaaa ggaaacacga tgaaaaccaa ttcagaagaa ctgaccgtat ttgttcaagt
      661 ggtggaaagc ggcagcttca gccgtgcggc ggagcagttg gcgatggcaa attctgccgt
      721 aagccgcatc gtcaaacggc tggaggaaaa gttgggtgtg aacctgctca accgcaccac
      781 gcggcaactc agtctgacgg aagaaggcgc gcaatatttc cgccgcgcgc agagaatcct
      841 gcaagaaatg gcagcggcgg aaaccgaaat gctggcagtg cacgaaatac cgcaaggcgt
      901 gttgcgcgtg gattccgcga tgccgatggt gctgcatctg ctggcgccgc tggcaacaaa
      961 attcaacgaa cgctatccgc atatccgact ttcgctcgtt tcttccgaag gctatatcaa
     1021 tctgattgaa cgcaaagtcg atattgcctt acgggccgga gaattggacg attccgggct
     1081 gcgtgcacgc catctgtttg acagccgctt ccgcgtaatc gccagtcctg aatacctggc
     1141 aaaacacggc acgccgcaat ctacagaaga gcttgccggc caccaatgtt taggcttcac
     1201 cgaacccagt tctctaaata catgggcggt tttagatgcg cagggaaatc cctataagat
     1261 ttcaccgcac tttaccgcca gcagcggtga aatcttacgc tcgttgtgcc tttcaggttg
     1321 cggtattgct tgcttatcag attttttggt tgacaacgac atcgctgaag gaaagttaat
     1381 tcccctgctc gccgaacaaa cctccgataa aacacacccc tttaatgctg tttattacag
     1441 cgataaagcc gtcaatctcc gcttacgcgt atttttggat tttttagtgg aggaactggg
     1501 aaacaatctc tgtggataat tctataaaaa cctgtcataa aattgttttt actcacttaa
     1561 taactttgag aaaaaataaa taagatgatg tatagccgcg gcaatggcag tctatatggg
     1621 gagcgtgata gggctgttcc ttatgtacgg cttgtgtgtg gcaacatcgg ctttccaaat
     1681 gacaaaatgc cgtctgaaac cgcaaaacgg tttcagacgg cattttcaac ctgattcagg
     1741 tatcagttgc ggtttttcaa acgcccgtgc aactcttgaa cgctgtacac gcccagatgg
     1801 tcgcggcttt tcgcgccttc gctcatcgct tcgccgccgg cagtggtggt gtattgcggc
     1861 acacgttgct gcaatgcgct ttggcggatg atgtggctgt cggacacgga ttgcggatcg
     1921 ttggaaacgg tattcacgac cagtgcgatt tcaccgtttt tcagcgcgtc gccgatgtgc
     1981 gggcggcctt cggggacttt attgatggtt tggacaatca gcccgtgttc ggtcaggtat
     2041 tgcgccgtgc cgcgtgtggc gcagatgccg tagcctaagg cttggaagtt tttggcggtt
     2101 ttaatgacgc gttctttgtc ttcttcgcgc acggagagga agattttgcc ggtcgggttg
     2161 aggcgttcgc ccgcgccgag ttgggctttg tagtaggctt cgccgaagct tgcgcccacg
     2221 cccatgactt cgccggtgga gcgcatttcc ggacccaaaa tcgtatccac gcccgggaat
     2281 ttgatgaagg ggaacacggc ttctttaacg gcatagaaat cggggacaac ttctttttcc
     2341 acgccttgtt ctttcaggga gatgcctgcc atgcagcgcg cgccgacttt ggcgagcggc
     2401 acgccggtgg ctttggagac gaagggcacg gtgcggctgg cgcgcgggtt cacttccaat
     2461 acgaacacta cgccgtcctg cacggcaaac tgcacgttca tcagtccgac cacgcccagc
     2521 gcgtacgcca tcgctttggt ttggcggcgg atttcgtctt ggatttcttc gcttaaggag
     2581 tagggcggca gcgagcagcc ggagtcgccg gagtggatgc ccgcctgttc gacgtgctgc
     2641 atgatgccgc cgataaccac atctttgccg tctgaaacgc agtccacatc gacttcaatc
     2701 gcgttgttca ggaagaagtc gagcaacacg gggctgtctt cggaaacctg cacggcttcg
     2761 cgcatatatt tttgcaactg ctcggcggag tggacaatct gcatcgcgcg tccgcccaaa
     2821 acataagacg ggcgcacgac cagcggataa ccgatttctt cggctttgac gagtgcttct
     2881 tcttcgttgt gggcgatgcg gttgggcggc tggcgcaggc ctaagtcgtt caacactttt
     2941 tggaagcgtt cgcggtcttc ggcggcatcg atgctgtcgg cggacgtgcc gatgatgttc
     3001 acgccgtttt caaccagcgc gttggcgagt ttgagcgggg tttgaccgcc gtaatgcaca
     3061 atcacgcccc acgggttttc ggtgcggacg atttccaaca cgtcttccaa tgtcagcggc
     3121 tcgaaataga ggcggtcgct ggtgtcgaag tcggtggaca cggtttctgg gttgcagttg
     3181 accataatcg tttcaaaacc ggattcgcgc agggcgagcg cggcgtgaac gcagcagtag
     3241 tcaaactcga tgccctgacc gatgcggttc gggccgccgc cgagaatcat cacttttttg
     3301 cggtcggaag gacgcgcttc gcattcctct tcgtaagtgg aatagaggta ggcggtttcg
     3361 gtggcgaact cggcggcgca ggtatcgacg cgtttgtaaa ccggatgcag cttcagcgcg
     3421 tagcggtgtt cgcgaacttc tttttcgctt acgttcaaca attgtgccaa acgtttgtcg
     3481 gagaagcctt tgcgtttcag acggcgtagg gcggcgaaat ccaaatcact caaaatgccg
     3541 tctgaaaccg ctttttcttc cttcatcaag tcttcgattt gcgccaggaa ccaagggtcg
     3601 atggcgcaga tttcgtggat ttcttccagc gtgaagcccg cgcggaacgc gtctgccaca
     3661 aacagcatac gttcggggcc ggggtttgcc agttcgcggc ggatttccgc tttgtcggag
     3721 cttctcggat tgaagccgca caagcctgtt tccaagccgc gcagggcttt ttggaagctt
     3781 tcctgaatcg tgcggcccat cgccatcact tcgcccacgg atttcatctg cgtggtcagg
     3841 cggtcgtctg cggcagggaa tttttcaaac gcaaaacgcg ggattttggt taccacatag
     3901 tcgatggacg gctcgaatga cgcgggggtt ttgccgccgg tgatgtcgtt gcgcaactcg
     3961 tccagcgtaa agccgaccgc cagtttcgcc gccaccttcg caatcgggaa gcccgtcgct
     4021 ttggaagcca gcgcggacga acggctcacg cgcgggttca tctcaatcac aatcatctcg
     4081 ccgttttcag ggtttactgc aaactgaacg tttgagccgc cggtatccac gccgatttca
     4141 cgcaacactg ccaacgaagc gttgcgcatg atttggtatt ccttgtccgt cagcgtttgc
     4201 gccggcgcaa ccgtaatcga gtcgcctgta tgcacgccca tcgggtcgaa gttttcaatc
     4261 gagcagatga tgatgcagtt gtcgttctta tcgcgcacca cttccatctc gtactctttc
     4321 cagccgagaa cggactgctc aatcaacagc tcgtgcgtgg gcgacgcatc gaaaccgcgt
     4381 tcgcaaatcg ccaaaaactc gtctttattg taggcaatgc cgccgcccga accgcccatg
     4441 gtgaaagaag gacgaatcag ggtagggaag ccgacctgtt cttgcgccgc caaagcttcg
     4501 ttcatcgtgt ggcagacaaa agatttcggg caagacaaac cgattttttc catcgcttct
     4561 ttaaagcggc cgcggtcttc cgccttgtca atcgcgtctt ccgtcgcgcc aatcagctcg
     4621 acattgtatt ttgccagcac gccgttgcgt gccaaatcca gcgcacagtt cagcgcggtc
     4681 tgaccgccca tcgtgggcag aatcgcatca ggccgctcct tggcgataat cttctccacc
     4741 gtctgccaca taatcggctc gatgtaggta acatccgcca tttcagggtc ggtcataatc
     4801 gtggcggggt tggaattcac caaaatgact ttatagcctt cttcacgcaa agccttgcag
     4861 gcctgtgcgc ccgaatagtc aaattcgcag gcctgaccga taacgatagg gccggcgccg
     4921 atgataagga tggattttag gtcggtacgt ttgggcatgg gtggttactc ttgaattaaa
     4981 gaaggttgtt ttgttacata gcttttaaga aaagtatttc ccttttctaa aattgaagct
     5041 aaaacatcat cttctatgtt agataaaata ttctctaaat ctgcgcttga tttaatttta
     5101 aagaattctt ttgtttgaga atggtataca agagaaggtt tatttagctg taaaagttct
     5161 gctatattat ttaatgaacc aatactctta ccatcccata aaataaagcc ataatcagca
     5221 atttctgcca ttttcttatc ttttgctgta taaaataccc ttccagttcc tttgctgtct
     5281 acttggacaa actgccaatt ccccacatta tttcggtaaa ttttgccaga aaagtaaata
     5341 tgcacattag cataatcttg ttcttgtaga aatttttgga tagctttatc agccccatta
     5401 gcatctccaa taacaatatc aaaattattg ctaagaatat tgttaattct ttctcgtatt
     5461 tgtggattta gtcgtgaaat gctgcgtgaa ccagaaaaga aaatagtgcg catttttatc
     5521 ctctagtctt tgtcattgct aaaacaatta cagatctagc attttttgaa aacaattttt
     5581 cagttgatat ttccaatgtt gctccgctat caaataaatc atcaattact aaaatattct
     5641 tattggatag atctatattg tcaattgtga tggaattatt cagtatttct agtttttctg
     5701 atttttcttc aatatttttg agtggtgtgt gtgagctaga ttttcttaaa ataggagaat
     5761 atggaatatt caagcgatca cttagttctt tggcaattaa ttgaactggt tgattaatac
     5821 gctctgttgt aaaaggggcg ggaacaatta aatttataga ttctaaacca ctaaattttt
     5881 gtaaaatata gtctaccagc aaagaaacat tttgggtttg attacgatat tttaattgat
     5941 aaacccattc tccaatcaca cttctcttgc tatcaaagtg aggatgccct aattcatcat
     6001 aacctaacaa aatacttttt tgcatatgat ggtctaaagc aaatcctttt gtccagttac
     6061 catttagttc tatcgccatt tcattgactc cttgtcaaaa ttaagtataa cgagcaatcc
     6121 tagcaagccg tagcccgcat gtagggtatg tgcggtacgc acgcacgcgt tctccatttt
     6181 ccctgcaacc ccaacccacc gcgtgcgtgc cttgcggcac actctctgcc gatgagttca
     6241 aaggtcgtct gaaaaaacgt tcgcggcgtt tgttccacct gccttgcgat aaaggctgcc
     6301 tgaaaaattc ccgctgttga tatttcgggc attctttctc aaaccgcctg caaccgcaaa
     6361 atccgctgca acctgccccc tcccccgtgg gggagggttg gggagagggc attccccgaa
     6421 tttcggcaac ctttcccaac aactcaacca ccgaaataca agccttgtgg cttgttgccc
     6481 tctctctagc tctctcccac gggagagagg acggagtggc tgtagggcta agggttctgc
     6541 aaggaaacag gttgtgcagg ttgctttttg cttttcagac gacctgaaat caacggtaaa
     6601 tccaagtcgc tttcaaaccg cctgcaaccg caaaatctgc tgaaacctac tccctccccc
     6661 gtgggggagg gctggggaga gggcattctc cgaatttcgg caacctttcc taacactcta
     6721 accgccaaga cacaagcctt gcggcttgtt gccctctctc tagctctctc ccacgggaga
     6781 gaggatgggg tggctgttgg ggctaaggtt tctgtaaact aatcaggtta tgcaggctgc
     6841 tttttgtttt tcagacggcc tttataaatg ctcaattcag tcggctttat cctattattt
     6901 tcaataatcc aatcaaaatc agccatctgc tatcgtgcag cttgcttttc caattcttgc
     6961 aacacgagca ggatttctgt cagcacatcg tttgtctgct gtaaaatctc gtgattccaa
     7021 aaccgcagta cggtaaagcc caagctgttg agatatgccg tccgcgcgtg gtcgtatgcg
     7081 gcttgttctg tgtgctgccc tccgtctgct tcgacaatca acttgggcgt tacgcacata
     7141 aaatcaacaa tatagtttcc catcggctgc tggcggcgga atttatagcc gttcagacga
     7201 cctgcccgca ggtgctgcca caattttgct tccgccccgc tcatttcttg gcgcatggct
     7261 ttggcgcgtt ggcgcaagat ggggttgtcg gtggtcaaga gtttctcgtg cgggttcatt
     7321 ttgttgtcgt gctgtttgct gccctctctc taactctctc ccacggggag agaggacggt
     7381 gcggctgtag tgattaaggg ttttgcaagg aaaacaagga aaacaagttg tacaggctgt
     7441 tttttatttt tcaagcgacc tgaaatcaac gcttgtaaat ccaagtcgct tttcaaactg
     7501 cctgcaaccg caaaatctgc tgcaacctac cccctccccc gtgggggagg gctggggaga
     7561 gggcattttc caagttgcgg caatctttcc caaatccctt agtcttctaa aatacaagcc
     7621 ttacggttgt tgccaaatga aacttcttcc atacccaaaa cttgcgtgta aaacgcaatg
     7681 gttcggtcaa tgtcggcaac ggtcagtacc agatggtcga gtgcgctaat cttcatttcc
     7741 cgctttcttt ttcaggcggc ggcagtgccg tctgaaagcc attatgcccg ttttgccgct
     7801 ttcatattgc caatgaattt gtcaaacaaa tagccgacat cttgcggacc ggggctggct
     7861 tcggggtggc cttggaagca gaacacaggt ttgtcggtca gctcgatgcc ttgcaaagtg
     7921 ttgtcaaaca aggatttgtg ggtaatgcgt gcgttagcgg gcagggtgtc ggcatcaacg
     7981 gcaaaaccgt ggttttggct ggtgatgacg actttgccgc tgtccaaatc ttgcacaggg
     8041 tggttcgcac cgtggtggct gaagcgcatt ttcagggttt tcgcgccgat ggcgaggctg
     8101 atgagctggt gtcccaagca aatgccgaaa atcggtttgc cgctttccat cagtttttgt
     8161 acggctttga tggcgtaggt gcaaggctcg gggtcgccgg ggccgttgga taggaatacg
     8221 ccgtcagggt tgagtgccaa cacgtcttcc gcgctcgttt gggcggggac gacggtcagg
     8281 cggcagccgc gcgaggcgag catacgcagg atgttggttt tcacgccgaa atcgtaggcg
     8341 acgacgtggt aaggctgttc gtcaggggta acgaaaccct tgcccaatgc ccattcgcct
     8401 tccgtccatt cgtaagtttc cgtgcaggaa acttcttttg ccaagtcttt gccgaccata
     8461 ctgccgaacg cggcgatgag ttcttgcgct tttttgattg tggcatccgc accggtcaga
     8521 atcgcgccgc cttgcgcgcc tttttcgcgc aacagcgtgg tcaggcggcg ggtatcgatg
     8581 tcggcgatgg cgacggtttt gttgcgtacc agatagtcgt gcaggctttc ggaggcgcgg
     8641 aagttgctgt gcaagagcgg caggtcgcgg ataatcaggc cggcggcata aacgctgcgg
     8701 ctttcttcat cttcggcgtt ggtgccggtg ttgccgatgt gtgggtaggt gagggtaacg
     8761 atttgtttgc agtaggacgg gtcggtcagg atttcctgat agccagtcat cgaagtattg
     8821 aacacgactt cgccggaagt cgaaccttcg taaccgattg atgtgccgtg gaatacgctg
     8881 ccgtcagcga ggacgaggag ggcgggggtg ctcatgatgg gaatcctgtt tttaataaaa
     8941 ttcttgacaa tgccgtctga agggacttcg gcagggggca tccggtcgga aaaatccggt
     9001 caaaaaaaaa cacgccgcgc aagatagacg cgtaacgtgc ttttcgggca agtgcctata
     9061 ccctgaaagc agcatatttt aagacgaaac atacccgatt tcaagcgcaa acgcggcagg
     9121 cgggctgata tgttcgcgcg aaaacggaaa tccgtggcgt aaaaccgccc gctccgcgcc
     9181 cactatgccc gttacgcatt tccccacgtc cgtccggcga aactatggga atacccgaat
     9241 cgtcaggaat acctgaatcg tcaggaatac ctgaatcgtc aggaatacct gaatcgtcag
     9301 gaatacccga accgtcattc ccgcgcaggc gggaatccag acctgtcggc acggaaactt
     9361 atcgggtaca acggtttctt gagattttac gtcctagatt cccgcctgcg cgggaatgac
     9421 gcgtttcatt tgccgcccct cccgaaaaac gcaaaaaatg ccgtccgaaa acctttcgga
     9481 cggcattttc gcgtgcaaat cagaagaaga cttcacgcca gctgattcgt ttcataccgc
     9541 acgtcgggcc ggtaatgtcc aagctgtcca aatcgttcat cagcagggtg cgcacccctt
     9601 tttgggagaa gcagcggttg tttttgccgg aacgcttgcc ggcggggtct at
//
LOCUS       DAWKJW010000059         9610 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.059, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000059 DAWKJW010000000
VERSION     DAWKJW010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9610)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9610)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9610
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.059"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            11..313
                     /locus_tag="WJJ54_001046"
     CDS             11..313
                     /locus_tag="WJJ54_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341924.1"
                     /translation="MTWVGGSGNAQQSSYYCEICESAGLNDTGNPDKSLGLPNNTFSN
                     PPGWGATIGALAGSRIGMPEFGTFASHAIENFDWSWYRRYREIAETIEREYSGGLP"
     gene            597..836
                     /locus_tag="WJJ54_001047"
     CDS             597..836
                     /locus_tag="WJJ54_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ7341925.1"
                     /translation="MPHLQNLSLGLKKKLPVILQTEISECGLACLAAVAGFHGFHTDL
                     RALRSKYCPRPLQNSPKSPKCLGGNFGEFCKGLIL"
     gene            897..2639
                     /gene="hrpB"
                     /locus_tag="WJJ54_001048"
     CDS             897..2639
                     /gene="hrpB"
                     /locus_tag="WJJ54_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion system transporter HrpB"
                     /protein_id="HEZ7341926.1"
                     /translation="MKFFPAPCLLVILAVIPLKTLAADENDAELIRSMQRQQHIDAEL
                     LTDANVRFEQPLEKNNYVLSEDETPCTRVNYISLDDKTARKFSFLPSVLMKETAFKTG
                     MCLGSNNLSRLQKAAQQILIVRGYLTSQAIIQPQNMDSGILKLRVSAGEIGDIRYEEK
                     RDGKSAEGSISAFNNKFPLYRNKILNLRDVEQGLENLRRLSSVKTDIQIIPSEEEGKS
                     DLQIKWQQNKPIRFSIGIDDAGGKTTGKYQGNVALSFDNPLGLSDLFYVSYGRGLAHK
                     TDLTDATGTETASGSRSYSVHYSVPVKKWLFSFNHNGHRYHEATEGYSVNYDYNGKQY
                     QSSLAAERMLWRNRFHKTSVGMKLWTRQTYKYIDDAEIEVQRRRSAGWEAELRHRAYL
                     NRWQLDGKLSYKRGTGMRQSMPAPEENGGGTIPGTSRMKIITAGLDAAAPFMLGKQQF
                     SYETAIHAQWNKTPLVAQDKLSIGSRYTVRGFDGEQSLSGERGFYWQNTLGWHFHPRH
                     QFYLGADYGRVSGESAQYASGKRLAGAVAGFRGSHKVGGIFAYDLFAGKPLHKPEGFQ
                     TANTVYGFNLNYSF"
     gene            2732..8779
                     /locus_tag="WJJ54_001049"
     CDS             2732..8779
                     /locus_tag="WJJ54_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HEZ7341927.1"
                     /translation="MNKGLHRTVFSKKHNTMVAVAETANSQGKGKQAGTSAPASPQIS
                     DGLYSKLKTTLKTLVCSLVSVSMVLPAHAQIITDKTAPKNQQAVILKTNTGAPLVNIQ
                     TPNARGLSHNRYTQFDVDAKGAVLNNDRNNNPFLAKGSAQLILNEVRGAASKLNGIVT
                     VGGQKADVIIANPNGITVNGGGFKNVGRGILTTGTPQIGKDGALTGFDVRQGTLTVGT
                     SGWNDKGGADYTEVLARAVALQGKLQGKNLAVSTGAQKVDYASGEISAGTAAGTKPTV
                     ALDTAALGGMYADSITLIANEKGVGVKNAGTLEAAKQLIVTSSGRIENSGRIATTADS
                     TEASPTYLSIETTETGAAGAFISNGGRIESKGLLVIDTGEDIGLRNGAVVQNNGNRPA
                     ATVLNAGRNLVIESKANVNNAKGSTNLSTGGRTVIKEASIQTGTTVYSSSKGNAELGN
                     NTRITGADVTVLSNGTISSSAVIDAKDTAHIEAGKPLSLEASTVTSDIRLNGGSIKGG
                     KQLALLADDNITAKTTNLNTPGNLYVHTGKDLNLNVDKDLSAASIHLKSDNAAHITGT
                     SKTLTASKDMGVEAGSLNVTNTNLRTNSGNLHIQAAKGNIQLRNTKLNAAKALETTAL
                     QGNIVSDGLHAVSADGHVSLLANGNADFTGHNTLTAKADVNAGSVGKGRLKADNTNIT
                     SSSGDITLVAGNGIQLGDGKQRNSINGKHISIKNNGGNADLKNLNVHAKSGALNIHSD
                     RALSIENTKLESTHNTHLNAQHERVTLNQVDAYAHRHLSITGSQIWQNDKLPSANKLV
                     ANGVLALNARYSQIADNTTLRAGAINLTAGTALVKRGNINWSTVSTKTLEDNAELKPL
                     AGRLNIEAGSGTLTIEPANRISAHTDLSIKTGGKLLLSAKGGNAGAPSAQVSSLEAKG
                     NIRLVTGETDLRGSKITAGKNLVVATTKGKLNIEAVNNSFSNYFPTQKAAELNQKSKE
                     LEQQIAQLKKSSPKSKLIPTLQEERDRLAFYIQAINKEVKGKKPKGKEYLQAKLSAQN
                     IDLISAQGIEISGSDITASKKLNLHAAGVLPKAADSEAAAILIDGITDQYEIGKPTYK
                     SHYDKAALNKPSRLTGRTGVSIHAAAALDDARIIIGASEIKAPSGSIDIKAHSDIVLE
                     AGQNDAYTFLKTKGKSGKIIRKTKFTSTRDHLIMPAPVELTANGITLQAGGNIEANTT
                     RFNAPAGKVTLVAGEELQLLAEEGIHKHELDVQKSRRFIGIKVGKSNYSKNELNETKL
                     PVRVVAQTAATRSGWDTVLEGTEFKTTLAGADIQAGVGEKARVDAKIILKGIVNRIQS
                     EEKLETNSTVWQKQAGRGSTIETLKLPSFESPTPPKLSAPGGYIVDIPKGNLKTEIEK
                     LSKQPEYAYLKQLQVAKNINWNQVQLAYDRWDYKQEGLTEAGAAIIALAVTVVTSGAG
                     TGAVLGLNGAAAAATDAAFASLASQASVSFINNKGDVGKTLKELGRSSTVKNLVVAAA
                     TAGVADKIGASALNNVSDKQWINNLTVNLANAGSAALINTAINGGSLKDNLGDAALGA
                     IVSTVHGEVASKIKFNLSEDYITHKIAHAIAGCAAAAANKGKCQDGAIGAAVGEIVGE
                     ALTNGKNPATLTAKEREQILAYSKLVAGTVSGVVGGDVNTAANAAKVAIENNLLSQEE
                     YALREKLIKKAKGKGLLSLDWGSLTEQEARQFIYLIEKDRYSNQLLDRYQKNPSSLNN
                     QEKNILAYFINQTSGGNTAWAASILKTPQSMGNLTIPSKDINNTLSKAYQTLSRYDSF
                     DYKSAVAAQPALYLLNGPLGFSVKAATVAAGGYNIGQGAKAISNGEYLHGTVQVVNGT
                     LMVAGSVSAQAAISAKPAPVTRYLSNDSAPALRQALTAESQRIRMKLPEEYRQIGNLA
                     IAKIDVKGLPQRMEAFSSFQKGEHGFISLPETKIFKPISVDKYHNIASPPRGTLRNID
                     GEYKLLETIAQQLGNNRNVSGRIDLFTELKACQSCSNVILEFRNRYPNIQLNIFTGK"
     gene            8784..9167
                     /locus_tag="WJJ54_001050"
     CDS             8784..9167
                     /locus_tag="WJJ54_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341928.1"
                     /translation="MEKIKNYIEFKKLFKNITEKFVRDLDITLIEAAEYSIIEFEIYL
                     SEYPEDSTFIFTAWAIYLLENNCLNERGKDNFFIAEMKKCYQQTNLDRIKSIYSSSDY
                     HIFAKDVNKIQQTFKLNLANIMQQE"
     gene            9417..>9610
                     /locus_tag="WJJ54_001051"
     CDS             9417..>9610
                     /locus_tag="WJJ54_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ7341929.1"
                     /translation="MLKTPPMLAAELSGKTGVSISAPYANENSRIILSAADIAAENGK
                     IKLQSYGDQSYYAGQGELYT"
BASE COUNT         2914 a         2274 c         2189 g         2233 t
ORIGIN      
        1 tgttcatgaa atgacttggg tcggaggctc aggtaatgcg caacaaagct catattattg
       61 cgaaatttgc gaatctgcag ggcttaacga tacgggaaat cctgataaat ctttaggatt
      121 gccaaacaat acgttcagta atccgcctgg ttggggagct acaatcggag ctttagcagg
      181 tagccgcata gggatgcctg aatttggtac gtttgcgagc catgccattg aaaatttcga
      241 ctggtcatgg tatcgacgtt atagggaaat tgccgaaacg attgaacgag aatattcagg
      301 cggtttgcct taatagttga ggaggtcatg atgtttgcca aacattatca attcatcgca
      361 ctcggcatca tgctgcttct ttatatgttg attctctata cgaccgattt ttccaatctg
      421 acgtattgga tgctgttttt tatctgtttt attacaggaa aaatattagc tcgtttgtta
      481 gagaaaagct ttaaataaaa tagcagctag tcgcaaaagg tcgtctgaaa ccttttcagg
      541 cggcctttct aaaatacatc caacttccta atccctattt ttcaaaaagg aaatctatgc
      601 cccatctgca aaacctgtct ttgggcttaa agaaaaagct gcctgttatc ctgcaaacag
      661 aaatatcaga atgcggcttg gcatgtctgg cggctgtggc gggatttcat ggtttccata
      721 cggatttacg cgcactgcgt tcaaaatact gtccgagacc tttgcaaaat tccccaaaat
      781 cccctaaatg tcttggtggg aattttgggg aattttgcaa aggtctcatt ctataactgt
      841 aaatactttt aaatttatga caaaatagta aatattgcta aaataatatt gatgtcatga
      901 aattttttcc tgctccatgt ctgttggtta tcctggctgt catacccctt aaaaccttag
      961 ctgccgatga aaacgatgca gaacttatcc gttccatgca gcgtcagcag cacatagatg
     1021 ctgaattgtt aactgatgca aatgtccgtt tcgagcaacc attggagaag aacaattatg
     1081 tcctgagtga agatgaaaca ccgtgtactc gggtaaatta cattagttta gatgataaga
     1141 cggcgcgcaa attttctttt cttccttctg tgctcatgaa agaaacagct tttaaaactg
     1201 ggatgtgttt aggttccaat aatttgagca ggctacaaaa agccgcgcaa cagatactga
     1261 ttgtgcgtgg ctacctcact tcccaagcta ttatccaacc acagaatatg gattcgggaa
     1321 ttctgaaatt acgggtatca gcaggcgaaa taggggatat ccgctatgaa gaaaaacggg
     1381 atgggaagtc tgccgagggc agtattagtg cattcaataa caaatttccc ttatatagga
     1441 acaaaattct caatcttcgc gatgtagagc agggcttgga aaacctgcgt cgtttgtcga
     1501 gtgttaaaac agatattcag attataccgt ccgaagaaga aggcaaaagc gatttacaga
     1561 tcaaatggca gcagaataaa cccatacggt tcagtatcgg tatagatgat gcgggcggca
     1621 aaacgaccgg caaatatcaa ggaaatgtcg ctttatcgtt cgataaccct ttgggcttaa
     1681 gcgatttgtt ttatgtttca tatggacgcg gtttggcgca caaaacggac ttgactgatg
     1741 ccaccggtac ggaaactgca agcggatcca gaagttacag cgtgcattat tcggtgcccg
     1801 taaaaaaatg gctgttttct tttaatcaca atggacatcg ttaccacgaa gcaaccgaag
     1861 gctattccgt caattacgat tacaacggca aacaatatca gagcagcctg gccgccgagc
     1921 gcatgctttg gcgtaacagg tttcataaaa cttcagtcgg aatgaaatta tggacacgcc
     1981 aaacctataa atacatcgac gatgccgaaa tcgaagtgca acgccgccgc tctgcaggct
     2041 gggaagccga attgcgccac cgtgcttacc tcaaccgctg gcaactggac ggcaagttat
     2101 cttacaaacg gggtaccggt atgcgccaaa gtatgcccgc acctgaagaa aacggcggcg
     2161 gtactattcc aggcacatcc cgtatgaaaa tcataaccgc cggattggat gcagcggccc
     2221 cgtttatgtt gggcaaacag cagttttcct acgaaaccgc tatccatgca caatggaaca
     2281 aaacgccttt ggttgcccaa gacaagttgt ctatcggcag ccgctacacc gttcgaggat
     2341 ttgacggtga acagagcctt tccggagagc gtggtttcta ctggcagaac actttgggct
     2401 ggcatttcca tccgcgccat caattctatc tcggcgcgga ctatggtcgg gtatcgggcg
     2461 aaagtgccca atatgcctcg ggcaagcggc tggcgggtgc agtggccggc ttcagaggca
     2521 gccataaagt aggcggtata tttgcttatg acttatttgc cggcaagccg ctgcacaagc
     2581 ccgaaggttt tcagacggcc aacaccgttt acggcttcaa tttgaattac agtttctaac
     2641 cctctcctgc attttttacc gacattcaga cagtctttca tcatttacag gccgtctgaa
     2701 gcgattacaa acatcattta aagggataaa tatgaacaaa ggtctgcatc gtaccgtttt
     2761 cagcaaaaag cacaacacta tggttgcagt tgccgaaacc gccaacagtc agggaaaagg
     2821 caaacaggca ggaacttccg ctccggcttc gccacaaatt tcagacggcc tttacagtaa
     2881 actcaaaacc acgcttaaaa ccttggtctg ctctttggtt tccgtcagta tggtattgcc
     2941 tgcccacgca caaatcatta ccgataaaac cgcgcccaaa aaccagcagg ccgttattct
     3001 taaaaccaat accggtgcgc cgttggtcaa catccaaact cctaatgccc gtggattgag
     3061 ccacaaccgc tatacccagt ttgatgtcga cgctaaaggt gctgtactga acaacgatcg
     3121 caacaacaac ccgtttctgg ccaaaggcag tgcgcagttg attttgaacg aggtgcgcgg
     3181 tgcggccagc aaactcaatg gcatcgttac cgtaggtggt caaaaggccg atgtgattat
     3241 cgccaacccc aacggcatta ccgtgaacgg cggcggcttt aaaaacgtcg gccgcggtat
     3301 cttaaccacc ggtacgcctc aaatcggcaa agacggtgcc ttgacgggat ttgacgtgcg
     3361 ccaaggcaca ttgaccgtcg gtacgtcagg ttggaacgac aaaggcggag ccgattacac
     3421 cgaagtgctt gcccgtgcgg ttgctttgca ggggaaattg cagggtaaaa acctggcggt
     3481 ttcgaccggc gcacagaaag tagattacgc cagcggtgaa atcagcgcag gtacggcagc
     3541 gggtacgaaa ccgaccgttg ccctcgatac tgccgcattg ggtggtatgt acgccgacag
     3601 cattaccctg attgccaatg aaaaaggcgt gggtgtcaaa aatgcgggca cactcgaagc
     3661 ggccaagcaa ttgatcgtta cttcctccgg ccgtattgaa aacagcggcc gcatcgccac
     3721 cactgccgac agcactgaag catcaccgac ttatctctcc atcgaaacca ccgaaacagg
     3781 cgcagcaggc gcatttatct ccaatggcgg ccggatagag agcaaaggct tattggttat
     3841 tgataccggg gaggacatcg gtttgcgtaa cggagcggtc gttcaaaaca acggcaaccg
     3901 ccctgctgct acggtattaa atgccggccg taatttggtt atcgaaagca aagcaaatgt
     3961 gaacaatgct aaaggttcga ccaatctgtc gaccggcggc cgtaccgtca tcaaggaggc
     4021 cagtattcag actggcacta ccgtatacag ttccagcaaa ggcaacgccg aattaggcaa
     4081 taacacacgc attaccgggg cagatgttac cgtattatcc aacggcacca tcagcagttc
     4141 cgccgtaata gatgccaaag acaccgcaca catcgaagca ggcaaaccgc tttctttgga
     4201 agcttcaaca gttacctccg atatccgctt aaacggaggc agtatcaagg gcggcaagca
     4261 gcttgcttta ctggcagacg ataacattac tgccaaaact accaatctga atactcccgg
     4321 caatctgtat gttcatacag gtaaagatct gaatttgaat gttgataaag atttgtctgc
     4381 cgccagcatc catttgaaat cggataacgc tgcccatatt accggcacca gtaaaaccct
     4441 cactgcctca aaagacatgg gtgtggaggc aggctcgctg aatgttacca ataccaatct
     4501 gcgtaccaac tcgggtaatc tgcacattca ggcagccaaa ggcaatattc agcttcgcaa
     4561 taccaagctg aacgcagcca aggctctcga aaccaccgca ttgcagggca atatcgtttc
     4621 agacggcctt catgctgttt ctgcagacgg tcatgtatcc ttattggcca acggtaatgc
     4681 cgactttacc ggtcacaata ccctgacagc caaggccgat gtcaatgcag gatcggttgg
     4741 taaaggccgt ctgaaagcag acaataccaa tatcacttca tcttcaggag atattacgtt
     4801 ggttgccggc aacggtattc agcttggtga cggaaaacaa cgcaattcaa tcaacggaaa
     4861 acacatcagc atcaaaaaca acggtggtaa tgccgactta aaaaacctta acgtccatgc
     4921 caaaagcggg gcattgaaca ttcattccga ccgggcattg agcatagaaa ataccaagct
     4981 ggagtctacc cataatacgc atcttaatgc acaacacgag cgggtaacgc tcaaccaagt
     5041 agatgcctac gcacaccgtc atctaagcat taccggcagc cagatttggc aaaacgacaa
     5101 actgccttct gccaacaagc tggtggctaa cggtgtattg gcactcaatg cgcgctattc
     5161 ccaaattgcc gacaacacca cgctgagagc gggtgcaatc aaccttactg ccggtaccgc
     5221 cctagtcaag cgcggcaaca tcaattggag taccgtttcg accaagactt tggaagataa
     5281 tgccgaatta aaaccattgg ccggacggct gaatattgaa gcaggtagcg gcacattaac
     5341 catcgaacct gccaaccgca tcagtgcgca taccgacctg agcatcaaaa caggcggaaa
     5401 attgctgttg tctgcaaaag gaggaaatgc aggtgcgcct agtgctcaag tttcctcatt
     5461 ggaagcaaaa ggcaatatcc gtctggttac aggagaaaca gatttaagag gttctaaaat
     5521 tacagccggt aaaaacttgg ttgtcgccac caccaaaggc aagttgaata tcgaagccgt
     5581 aaacaactca ttcagcaatt attttcctac acaaaaagcg gctgaactca accaaaaatc
     5641 caaagaattg gaacagcaga ttgcgcagtt gaaaaaaagc tcgcctaaaa gcaagctgat
     5701 tccaaccctg caagaagaac gcgaccgtct cgctttctat attcaagcca tcaacaagga
     5761 agttaaaggt aaaaaaccca aaggcaaaga atacctgcaa gccaagcttt ctgcacaaaa
     5821 tattgacttg atttccgcac aaggcatcga aatcagcggt tccgatatta ccgcttccaa
     5881 aaaactgaac cttcacgccg caggcgtatt gccaaaggca gcagattcag aggcggctgc
     5941 tattctgatt gacggcataa ccgaccaata tgaaattggc aagcccacct acaagagtca
     6001 ctacgacaaa gctgctctga acaagccttc acgtttgacc ggacgtacgg gggtaagtat
     6061 tcatgcagct gcggcactcg atgatgcacg tattattatc ggtgcatccg aaatcaaagc
     6121 tccctcaggc agcatagaca tcaaagccca tagtgatatt gtactggagg ctggacaaaa
     6181 cgatgcctat accttcttaa aaaccaaagg taaaagcggc aaaatcatca gaaaaaccaa
     6241 gtttaccagc acccgcgacc acctgattat gccagccccc gtcgagctga ccgccaacgg
     6301 tatcacgctt caggcaggcg gcaacatcga agctaatacc acccgcttca atgcccctgc
     6361 aggtaaagtt accctggttg cgggtgaaga gctgcaactg ctggcagaag aaggcatcca
     6421 caagcacgag ttggatgtcc aaaaaagccg ccgctttatc ggcatcaagg taggtaagag
     6481 caattacagt aaaaacgaac tgaacgaaac caaattgcct gtccgcgtcg tcgcccaaac
     6541 tgcagccacc cgttcaggct gggataccgt gctcgaaggt accgaattca aaaccacgct
     6601 ggccggtgcc gacattcagg caggtgtagg cgaaaaagcc cgtgtcgatg cgaaaattat
     6661 cctcaaaggc attgtgaacc gtatccagtc ggaagaaaaa ttagaaacca actcaaccgt
     6721 atggcagaaa caggccggac gcggcagcac tatcgaaacg ctaaaactgc ccagcttcga
     6781 aagccctact ccgcccaaat tgtccgcacc cggcggctat atcgtcgaca ttccgaaagg
     6841 caatctgaaa accgaaatcg aaaagctgtc caaacagccc gagtatgcct atctgaaaca
     6901 gctccaagta gcgaaaaaca tcaactggaa tcaggtgcag cttgcttacg acagatggga
     6961 ctacaaacag gagggcttaa ccgaagcagg tgcggcgatt atcgcactgg ccgttaccgt
     7021 ggtcacctca ggcgcaggaa ccggagccgt attgggatta aacggtgcgg ccgccgccgc
     7081 aaccgatgca gcattcgcct ctttggccag ccaggcttcc gtatcgttca tcaacaacaa
     7141 aggcgatgtc ggcaaaaccc tgaaagagct gggcagaagc agcacggtga aaaatctggt
     7201 ggttgccgcc gctaccgcag gcgtagccga caaaatcggc gcttcggcac tgaacaatgt
     7261 cagcgataag cagtggatca acaacctgac cgtcaaccta gccaatgcgg gcagtgccgc
     7321 actgattaat accgccatca acggcggcag cctcaaagac aacttgggcg atgccgcact
     7381 gggtgcgata gtcagtaccg tacacggaga agtagcgagc aaaatcaaat ttaatctcag
     7441 cgaagactac attacccaca agattgccca tgccatagcg ggctgtgcgg cagcggcggc
     7501 gaataagggt aagtgtcagg atggtgcgat cggtgcggct gtgggcgaga tagtcgggga
     7561 ggctttgaca aacggcaaaa atcctgccac tttgacagct aaagaacgcg aacagatttt
     7621 ggcatacagc aaactggttg ccggtacggt aagcggtgtg gtcggcggcg atgtgaatac
     7681 agcggcgaat gcggctaaag tcgcgattga aaataaccta ttatctcaag aagagtatgc
     7741 tcttagagaa aaattgatca aaaaagccaa agggaaaggc ctattatctt tagattgggg
     7801 cagcctgacc gaacaagagg caaggcagtt tatctatttg attgagaaag atcgatattc
     7861 taatcaattg cttgaccgat atcaaaaaaa tccaagtagt ttaaataatc aagaaaaaaa
     7921 tattcttgca tattttatta accaaacctc tggaggtaac acagcttggg cagcttcgat
     7981 actgaaaacg ccccagtcaa tgggtaatct cactattcct tccaaagata ttaataacac
     8041 cttatcgaaa gcctatcaaa cattgagtcg ttatgattct tttgattaca aatcagctgt
     8101 tgccgcacaa cctgcacttt acttattaaa cggaccgctt ggcttcagtg tcaaagcagc
     8161 tactgtggca gcaggaggat ataacattgg acagggagcg aaagcaatct ctaatggaga
     8221 atatctgcat ggtacagttc aggttgttaa tggcacattg atggttgcag gatctgtatc
     8281 tgcacaggct gcaatatcgg ccaagcctgc acctgttacc cgttatctga gcaatgacag
     8341 tgctcctgct ttaagacaag ctttaactgc tgaaagccag agaatccgca tgaaactgcc
     8401 ggaagagtat cgacaaatag ggaatcttgc gatagcaaaa attgatgtta aaggattacc
     8461 gcaaaggatg gaagcattta gttctttcca aaaaggggaa catggattta tttcgttacc
     8521 tgaaacaaaa atttttaaac ctatatctgt tgataaatat cataatattg cctctcctcc
     8581 tagaggaaca ttaagaaata tagatggaga atataaatta cttgaaacta tagcacagca
     8641 actcggaaat aatcgtaatg tatcaggtag aattgatcta tttacagaat taaaggcctg
     8701 tcaatcttgc agcaatgtta ttttagagtt tagaaatcgc tatccaaata ttcaattaaa
     8761 tatttttaca ggaaaataga atcatggaaa aaataaaaaa ttatatagaa ttcaagaaat
     8821 tatttaaaaa tataacggaa aaatttgtca gagatttaga tataacatta attgaagcag
     8881 ctgaatattc tataattgaa ttcgaaattt atttatctga atatccggaa gatagtacat
     8941 ttatttttac agcatgggca atctatctgt tagaaaataa ctgtctcaat gaaagaggaa
     9001 aagataattt tttcatcgcg gaaatgaaaa aatgttatca acaaactaat ttggatagaa
     9061 taaaatctat ctattcttcg agtgactatc atatttttgc taaggatgta aacaagattc
     9121 aacaaacatt taaattaaat cttgccaata tcatgcagca agagtagcaa ctgtattttt
     9181 aaccccgtcg ggcaaaatta ccaaaaacgg taaatcacta aaaatacttt tataccgccg
     9241 ccgcagcaag ctgtagcctg catgaaacct aaaatccatg cgtaaggtgt gtgctccagc
     9301 acgcacgcgt tccatgattt acggctcaat gccgtctgaa aagctcacaa tttttcagac
     9361 ggcatttgtt atgcaagtaa atattcagat tccctatata ctgcccagat gcgtgcgtgc
     9421 tgaagacacc ccctatgctt gctgcagaac tttcgggtaa aaccggtgtg agcattagcg
     9481 caccgtatgc caatgagaac agccgcatca ttttgagtgc cgccgatata gccgcagaaa
     9541 acggcaaaat caaactgcaa tcctacggcg accaatccta ttacgccgga cagggcgaac
     9601 tctatacctt
//
LOCUS       DAWKJW010000060         9570 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.060, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000060 DAWKJW010000000
VERSION     DAWKJW010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9570)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9570)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9570
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.060"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     repeat_region   42..276
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=42..78
                     /rpt_unit_seq="gttgtagctcccattctcatttcgcagtgctacaata"
     gene            complement(339..665)
                     /gene="cas2"
                     /locus_tag="WJJ54_001052"
     CDS             complement(339..665)
                     /gene="cas2"
                     /locus_tag="WJJ54_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HEZ7341930.1"
                     /translation="MSEAKFMRIIVFFDLPVITAAKRKAANQFRQFLLKDGYQMLQLS
                     VYSRIVKGRDSLQKHHNRLCANLPQEGSIRCLEITEKQYAAMKLLLGELKTQEKKVNS
                     DQLLLF"
     gene            complement(658..1572)
                     /gene="cas1"
                     /locus_tag="WJJ54_001053"
     CDS             complement(658..1572)
                     /gene="cas1"
                     /locus_tag="WJJ54_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR-associated endonuclease Cas1"
                     /protein_id="HEZ7341931.1"
                     /translation="MTWRSLLIQNGGKLSLQRQQLLIQQNDESHTVPLEDIAVIIIEN
                     RETLITAPLLSALAEHGATLLTCDEQFLPCGQWLPYAQYHRQLKILKLQLNISEPLKK
                     QFWQHIVRQKILNQAFVADETGNDLAAKRLRTLASEVRSGDTGNREAQAAALYFQALF
                     GEKFTRNDNNAVNAALNYTYAVLRAAVARALTLYGWLPALGLFHRSELNPFNLADDFI
                     EPLRPLADLVVIHLYEQGRLKTELTPSIKQHLIKTLHCQTSIERQHFSTLAAIDKMVS
                     SFQAGVTDKNAKQLKLPEILPLKAYQYE"
     gene            complement(1638..4883)
                     /gene="cas9"
                     /locus_tag="WJJ54_001054"
     CDS             complement(1638..4883)
                     /gene="cas9"
                     /locus_tag="WJJ54_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742773.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HEZ7341932.1"
                     /translation="MAAFKPNSINYILGLDIGIASVGWAMVEIDKEENPIRLIDLGVR
                     VFERAEVPKTGDSLAAARRLARSVRRLTRRRAHRLLRTRRLLKREGVLQAANFDKNGL
                     IKSLPNTLWQLRAAALDRKLTPLEWSAVLLHLIKHRGYLSQRKNEGETADKELGALLK
                     GVAGNAHALQTGDFRTPAELALNKFEKESGHIRNQRGDYSHTFSRKDLQAELNLLFEK
                     QKEFGNPHISDGLKEGIETLLMTQRPALSGDAVQKMLGHCTFEPTEPKAAKNTYTAER
                     FVWLTKLNNLRILEQGSERPLTDTQSAKLMDEPYRKSKLTYAQARKLLGLEDTAFFKG
                     LRYGKDNAEASTLMEMKAYHAISRALEKEGLKDKKFPLNLSPELQDEIGTAFSLFKTD
                     EDITGRLKDRIQPEILEALLKHISFDKFVQISLKALRRIVPLMEQGKRYDEACAEIYG
                     DHYGKKNTEEKIDLPPIPADEIRNPVVLRALSQARKVINGVVRRYGSPARIHIETARE
                     VGKSFKDRKEIEKRQEENRKDREKAAAKFREYFPNFVGEPKSKDILKLRLYEQQHGKC
                     LYSGKEINLGRLNEKGYVEIDHALPFSRTWDDSFNNKVLVLGSENQNKGNQTPYEYFN
                     GKDNSREWQEFKARVETSRFPRSKKQRILLQKFDEEGFKERNLNDTRYVNRFLCQFVA
                     DHMLLTGKRKRRVFASNGQITNLLRGFWGLRKVRAENDRHHALDAVVVACSTVAMQQK
                     ITRFVRYKEMNAFDGKTIDKETGEVLHQKTHFPQPWEFFAQEVMIRVFGKPDGKPEFE
                     EADTPEKLRTLLAEKLSSRPEAVHEYVTPLFVSRAPNRKMSGQGHMETVKSAKRLDEG
                     ISVLRVPLTQLKLKDLEKMVNREREPKLYEALKARLEAHKDDPAKAFAEPFYKYDKAG
                     NRTQQVKAVRVEQVQKTGVWVRNHNGIADNATMVRVDVFEKAGKYYLVPIYSWQVAKG
                     ILPDRAVVAYADEEGWTVIDESFRFKFVLYSNDLIKVQLKKDSFLGYFSGLDRATGAI
                     SLREHDLEKSKGKDGMHRIGVKTALSFQKYQIDEMGKEIRLCRLKKRPPVR"
     gene            complement(5161..8595)
                     /gene="dnaE"
                     /locus_tag="WJJ54_001055"
     CDS             complement(5161..8595)
                     /gene="dnaE"
                     /locus_tag="WJJ54_001055"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEZ7341933.1"
                     /translation="MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDL
                     MNEFGLVKFYKACRSAGIKPVGAADVWIGNPNAPDKPFRAMLIIRNDAGYLRLSELLT
                     AAYVGKDRNIHHAELNPEWLANGDNSGLICLNGAHYGEVGVNLLNGNEDAARTAALKY
                     AAWFPDAFYMELQRLPERPEWEACVSGSVKLAEELGLPVVATHPTQFMSRDDFNAHEA
                     RVCIAGGWVLTDKKRPRDFTPGQFFIPPETMLERFADLPEALENTVEIAKRCNLHITL
                     GKNFLPLFPTPDGLSRDDYLIKLSNKGLQERMVQLYPDEAERAAKMPEYQERLDFELN
                     IIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLF
                     ERFLNPERVSMPDFDVDFCQANRGRVIEYVRDKYGAQAVSQIVTFGTMSSKAVIRDVG
                     RVLELPFMLCDKLSKLIPLEANKPLGLDDAMKAEPQIQELIEAEEADELITLAKKLED
                     LTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRN
                     LTIIEMAQNNIKNTTGDIVDVGKIPLDDQAAYQIFRDANTTAVFQFESTGMKKMLKTA
                     HTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQ
                     VMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNY
                     MEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCR
                     ANGIEFLPPDINESDYRFTPYPDMKIRYALGAIKGTGEAAVESITAARQSGGKFTGLL
                     DFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMNNADQKAANANQGGL
                     FDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQEVRQIAPQKLSK
                     LKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQVEIMVGGQTLENCADCLKADQ
                     VLIIESKVSRDDYGGGDGLRILANQVMTLQTARERYARSLSLALAPHHDIGGLVRLLA
                     AHQLPDTPRIPLQLSYANEKASGRLQVPRKWTVTPSSALFGELETLLGSRSVRVNW"
     gene            9140..9373
                     /locus_tag="WJJ54_001056"
     CDS             9140..9373
                     /locus_tag="WJJ54_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEZ7341934.1"
                     /translation="MEAIVYLEDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNG
                     ETEIRKTAKIRGGEVIEFDGARLEIADGYDPEA"
     gene            9351..9554
                     /locus_tag="WJJ54_001057"
     CDS             9351..9554
                     /locus_tag="WJJ54_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341935.1"
                     /translation="MDTTLKHKAEALLGEPLLDEPVRPESWECCGSDCGDACIQTIYW
                     ADKARYDAQRRKLKEAGWSDDAV"
BASE COUNT         2025 a         2333 c         2598 g         2614 t
ORIGIN      
        1 cccacacgcc gcctagcacg ccgcctagca cgccgccgag agttgtagct cccattctca
       61 tttcgcagtg ctacaataca aatcaatacc atgaaaaccc catgcgcgtt gtagctccca
      121 ttctcatttc gcagtgctac aataaaaact ttttaggggg gtcggaaaaa tgtgttgtag
      181 ctcccattct catttcgcag tgctacaata acccattacg ccacaagtat ttcacagcgg
      241 ttgtagctcc cattctcatt tcgcagtgct acaatacccc aacgggaaat ccttattcta
      301 taaggatttc ccgttttatt tagtctgaaa aaatgggctt aaaataacaa taattggtct
      361 gaattgacct ttttttcttg ggttttcagc tcgcccaaca gcagtttcat ggcggcatat
      421 tgcttttctg ttatctccaa acagcggatt gagccttctt gcggaaggtt tgcacatagt
      481 ctattgtggt gtttttgcaa cgaatcgcgg cctttgacga tacggctgta tacggaaagt
      541 tgcagcattt ggtatccgtc ttttaataaa aactggcgga attgattggc ggctttgcgc
      601 tttgccgccg tgataaccgg taggtcgaag aagacgataa tcctcataaa tttggcctca
      661 ctcatattgg tatgctttca atggtaggat ttcaggcagt ttcagttgtt tggcgttttt
      721 atcggttacg ccggcttgaa atgacgaaac cattttgtcg atggcagcca aggtgctgaa
      781 atgttgccgt tcgatgctgg tttgacagtg aagggttttg ataaggtgtt gtttgatgct
      841 gggcgtcagt tcagttttca gacggccttg ttcgtacaaa tgtataacga ccagatcggc
      901 caatgggcgt aagggttcga taaagtcatc ggcgagattg aatggattca actcacttct
      961 atgaaacaag cctaatgcag gcaaccaacc gtataaggtc agggcgcgtg caactgcagc
     1021 ccggagcaca gcgtaggtat agttcaatgc ggcattgacg gcgttgttgt cattgcgggt
     1081 aaatttttcg ccaaagaggg cttggaagta gagggcggcg gcttgggctt cgcggtttcc
     1141 tgtatcgccc gagcggactt cagatgccaa agtgcgcagc cgtttggctg caagatcatt
     1201 gccggtttcg tctgcgacaa atgcttgatt caggattttt tggcggacga tatgttgcca
     1261 gaattgcttt tttaagggtt cgcttatgtt cagttgcagc ttgaggattt taagttggcg
     1321 gtgatattgg gcataaggca gccattgtcc gcagggcagg aactgctcgt cacatgtcag
     1381 taaggttgcg ccatgttcgg ctaaggctga cagaagtgga gcggtaatca gggtttcgcg
     1441 gttttcgatg atgataacgg cgatgtcttc taatggtacg gtgtgggact cgtcattttg
     1501 ttgaatcagc agttgctggc gttgcaagga tagtttgccg ccgttttgaa tgagcaggct
     1561 gcgccaagtc atgttttccc cttattttga tataaaaaat ccctgcttca ggtcgtctga
     1621 aacagggata gattaattta acggacaggc gggcgttttt tcagacggca tagtctgatt
     1681 tctttgccca tttcgtcgat ttggtatttt tgaaaggaaa gggcggtttt aacgccgata
     1741 cgatgcatac cgtctttacc ttttgatttt tccaaatcat gctcccgaag agaaatggct
     1801 ccagtggctc gatctaatcc tgaaaagtaa cctaaaaagc tgtctttttt aagttgaact
     1861 ttaattaaat cattcgaata aagtacaaat ttaaatctga agctttcatc tattacagtc
     1921 cagccctctt catctgcata agcaacaaca gccctgtccg gtaaaattcc tttcgcaacc
     1981 tgccaactgt aaattggcac caaataatat ttgccagctt tttcaaacac atctacgcgc
     2041 accatggttg cgttgtcggc aatgccgtta tggttgcgca cccatacgcc ggttttctgt
     2101 acttgctcta cgcgcacggc ttttacctgt tgggtgcggt tgcctgcttt atcgtatttg
     2161 taaaacggtt cggcaaaggc tttggctggg tcgtctttat gtgcttccaa acgtgctttc
     2221 agtgcttcgt atagcttagg ttcgcgctcc cgattgacca ttttttccaa gtctttcagt
     2281 tttaactgtg tcagcggtac gcgcaacacg ctgatgcctt cgtccagccg tttggcggat
     2341 ttgacggttt ccatatggcc ttgcccactc atcttccgat tgggcgcacg cgaaacaaac
     2401 agtggcgtaa cgtattcgtg cacggcttcg ggacgagatg ataatttttc tgcgagcagg
     2461 gtacgcagtt tttcgggggt atccgcttct tcaaattcgg gtttcccgtc cggtttgccg
     2521 aagacgcgaa tcatgacttc ttgtgcgaaa aattcccaag gttgcgggaa gtgtgttttt
     2581 tgatgcagca cttctcctgt ttctttatct atggttttcc cgtcaaacgc gttcatttct
     2641 ttatagcgta caaaacgggt aattttctgc tgcatggcaa cggtcgagca ggcaacgacg
     2701 acggcatcca aggcgtgatg gcggtcgttt tccgcacgca ctttgcgcaa tccccaaaag
     2761 ccgcgcaaca gattggtaat ttgtccgttg gatgcaaaga cacgtctttt ccttttacct
     2821 gtcagcagca tatggtcggc aacgaattgg cacaggaaac ggttgacgta gcgcgtatcg
     2881 ttcagattgc gttctttaaa gccctcttca tcgaattttt gcagcagaat ccgttgtttt
     2941 ttactgcgtg ggaaacggct ggtttcgaca cgcgctttaa attcctgcca ttcgcggctg
     3001 ttgtctttgc cgttgaagta ttcgtaaggg gtttgattgc ctttgttttg gttttcgctg
     3061 cccaatacca gcactttatt gttgaaactg tcgtcccatg tgcgcgagaa cggcagggca
     3121 tggtcaattt cgacatagcc tttttcgttc agacggccta agttgatttc tttgcccgaa
     3181 tacaggcatt tgccgtgttg ttgctcgtac aggcgcagtt tcagaatatc tttggatttg
     3241 ggttcgccga caaaattggg gaaatactct cggaatttgg cggcggcttt ttcacggtct
     3301 ttacggtttt cttcttggcg tttttcgatt tctttgcggt ctttaaacga ttttcctact
     3361 tcccttgccg tttcaatatg gatacgtgcg ggggagccgt aacgccgaac cacgccgtta
     3421 atgacttttc tggcctgaga taaggcacgc aaaacaacgg ggttgcggat ttcgtcggca
     3481 gggatgggcg gcagatcaat cttttcttcc gtattcttct tgccgtaatg gtctccgtag
     3541 atttcggcgc aggcttcatc gtaacgtttg ccttgttcca ttagaggcac aattcggcgc
     3601 aatgctttca aggaaatttg aacgaacttg tcgaagctga tgtgttttaa cagcgcttct
     3661 aagatttcgg gctgtatacg gtctttcaga cggcctgtaa tgtcttcatc ggttttgaac
     3721 agggagaatg ccgtgccgat ttcgtcttgt aattcgggag aaaggtttaa tgggaatttt
     3781 ttgtctttca atccttcttt ttccagcgca cggctgatgg catggtaggc cttcatttcc
     3841 atcaacgttg aggcttcggc attgtcctta ccatagcgca agcctttgaa aaaggcggta
     3901 tcttctaaac ccagtagctt acgggcttgt gcgtaagtca gtttggattt tctgtatggc
     3961 tcgtccataa gcttggcgct ttgggtatcg gtcaatggcc gctcgctgcc ttgctctaaa
     4021 atacgcaggt tgttcagctt ggtcagccag acgaaacgtt cagctgtgta ggtgttttta
     4081 gcggctttcg gctctgtcgg ttcgaaggtg caatgtccca acattttttg aacagcatcg
     4141 ccggataggg cggggcgttg cgtcatcagc agggtttcaa taccttcttt aaggccgtct
     4201 gaaatatgcg gattgccgaa ttctttttgt ttttcaaaca ataaattcag ctccgcctgc
     4261 aaatctttgc ggctgaacgt atgcgaataa tcgccgcgct ggttgcggat atggccgctt
     4321 tctttctcaa atttatttaa agccaattcg gctggtgtgc ggaaatcgcc tgtctgtaag
     4381 gcatgggcat tgccggctac gcctttaagc aaagcgccaa gctccttatc ggcagtttcg
     4441 ccctcgtttt tccgttgcga taaatagccg cgatgtttga ttaaatgcaa caagactgct
     4501 gaccactcta aaggcgtcag tttgcggtct aatgcggctg cgcgaagttg ccatagtgta
     4561 ttcggtaagg atttaattaa gccgtttttg tcaaaattgg cggcttgtaa tacgccttcg
     4621 cgtttcaata ggcggcgggt ccgaagcagg cggtgggcgc gacggcgggt caggcggcga
     4681 acactgcgtg ccaagcgtct tgccgctgcg agagagtcgc ctgttttcgg tacttcggcc
     4741 cgctcaaata cgcgcacgcc caaatcaatc aggcggatgg ggttttcttc tttgtcaatt
     4801 tctaccattg cccagccgac ggatgcaatg ccgatatcga ggccgaggat gtagttgatt
     4861 gaattaggtt tgaaggcagc catttattac tccgtaaaca acgttgcaaa taatgataat
     4921 atatctgatt gtcttattta tatacaaata gattattgac ttatcatctc acaacggcta
     4981 gaatcccaaa catattgtcg cactgcgaaa tgagaaccgt tgctacaata aggccgtctg
     5041 aaaagatgtg ccgcaacgct ctgcccctta aagcttctgc tttaaggggc atcgtttatt
     5101 tcggctaaaa aatgccgtct gaaaccggtt ttgggcttca gacggcattt atattttggg
     5161 ttaccagttg acgcgcaccg accggctgcc gagcaatgtt tccagttcgc cgaacaaggc
     5221 ggaactcggt gtaaccgtcc atttccgcgg cacttgaagc ctgcccgacg ctttttcgtt
     5281 ggcatacgac agttgcagcg ggatgcgcgg cgtgtcgggc agttggtggg cggcgagcag
     5341 ccgtaccagt ccgccgatgt cgtgatgcgg ggcgagggcg aggctgaggc tgcgggcgta
     5401 gcgttcgcgc gccgtttgca gggtcatgac ttggtttgcc agaatacgca gcccgtcgcc
     5461 gccgccgtag tcgtcgcggc tgactttgga ttcgataatc agcacttggt cggctttgag
     5521 gcagtcggcg cagttttcca acgtctgacc gccgaccatg atttcaacct gtccgctcaa
     5581 atcttcaagg ctgacgaagg cgattttgcc gcgcttgccc atcatggtgc gtacggcggt
     5641 aacgaatccg gcgaggcgca cgctgtcttg cggtttgagt ttcgacagtt tctgcggggc
     5701 gatttggcgg acttcttggg catacgggcc gaaggggtgg ccggacaggt agaagccgat
     5761 gacggttttt tcttcggcga gtttttccga ttcgctccac atcggtgcgt caatgagccg
     5821 caccggttcg atggcgtctt ccatcatgtc gaacagaccg ccctgattgg cgttggcggc
     5881 tttttggtcg gcgttgttca tggcaaggtc gatgtttgcc aagagcatgg cgcggttggg
     5941 ttcgatgctg tcgaacgcgc caccgcgtat cagggcttca agggtgcggc ggttcatgtg
     6001 ttctttgccg acgcgctcgc agaagtccaa gaggccggta aacttgccgc cgctttgccg
     6061 cgcggcggtg atggattcga cggcggcttc gcccgtgcct ttaatcgcgc cgagcgcgta
     6121 gcggattttc atgtccggat acggcgtgaa gcggtagtcg gattcgttga tgtcgggcgg
     6181 caggaactcg atgccgttgg cgcggcagtc gtcgtagaaa tgcttgagct ggtcggtgtt
     6241 gtccaattca gacgacatgg tcgccgccat aaattcggcg gggtagtggg ctttgagcca
     6301 tgcggtctgg taggaaatca gggcgtaggc ggcggcgtgg gatttgttga agccgtagcc
     6361 ggcgaatttt tccatgtagt tgaagatttc gtcggatttt tcgcgcgaaa tgccttgttt
     6421 cgccgcacct tcggcgaaga tttctcggtg tttcaccatt tcttcgggct ttttcttacc
     6481 catggcgcga cgcagcaggt ccgcgccgcc gagcgagtag ccgccgataa tctgcgccgc
     6541 ctgcatcact tgttcctgat acaccataat gccgtaggtc ggcgcgagga tgccttcgag
     6601 cagcgggtgg atgtattgga attcctgacc cttcatgcgc gcgacgaagt cggggatgtt
     6661 gtccatcgga ccgggtcggt agagcgatac gaaggcgatg agttcttcaa acttggtcgt
     6721 gtgcgccgtt ttcagcattt ttttcatgcc ggtcgactcg aactggaaga cggcggtggt
     6781 gttcgcatcg cggaagattt ggtaggcggc ctggtcgtca agcggaatct tgccgacatc
     6841 gacaatatcg ccggtggtgt ttttgatgtt gttctgcgcc atttcgataa tggtcaggtt
     6901 tcgcagaccc aaaaagtcga atttcaccaa gcccacgtct tccacgtcgc ctttgtcgta
     6961 catcgatact ggcgaggcgg attcgtctgc ctgatacacg gggctgtaat cggaaatctt
     7021 gcccggcgca atcaatacgc cgcccgcgtg catacccaag ccgcgcgtca aatcttccag
     7081 ctttttcgcc agcgtaatca gttcgtccgc ttcttccgct tcgattaatt cctgaatctg
     7141 cggctccgcc ttcatcgcat cgtccaaacc cagaggtttg ttggcttcca gcggaatcag
     7201 cttggacaat ttgtcgcaca gcataaacgg cagctccagc acgcgcccta cgtcgcggat
     7261 gaccgctttg gacgacatcg tgccgaaggt aacaatctgg ctgaccgcct gagcgccgta
     7321 tttatcgcgt acatattcga tcacgcggcc gcggtttgcc tgacagaagt caacgtcgaa
     7381 gtcgggcatg gagacgcgtt cggggtttaa gaaacgttcg aacagcagcg cgtatttcag
     7441 cgggtcgagg tcggtaattt tcagcgaata cgccaccagc gaacccgcgc ccgaaccgcg
     7501 tcccggcccg accggacagc cgtgcgtttt cgcccagttg ataaagtctt gtacgataag
     7561 gaaatagccg gggaatttca tctggatgat gatgttcagc tcaaaatcca aacgttcctg
     7621 atattccggc atttttgccg cacgctccgc ctcgtcggga taaagctgaa ccatgcgttc
     7681 ctgcaaaccc ttgtttgaga gtttgatgag atagtcatcg cgcgataaac cgtcgggcgt
     7741 ggggaaaagg ggcaggaagt ttttgcccaa tgtgatgtgc aggttgcagc gtttggcgat
     7801 ttccaccgtg ttttccaagg cttcgggcaa gtcggcgaaa cgctccagca tcgtttccgg
     7861 cggaatgaaa aactggcccg gtgtgaaatc gcgcggacgt tttttgtccg tcaataccca
     7921 gccgcccgcg atacacaccc gcgcctcgtg tgcgttgaaa tcgtcgcggc tcataaactg
     7981 tgtcggatgc gtcgccacca ccggcaaacc caattcctcc gccagcttca cgctgcccga
     8041 aacgcaagcc tcccattcgg ggcgttcggg caggcgttgc agctccatat agaacgcatc
     8101 ggggaaccac gccgcatact tcaacgccgc cgtacgcgcc gcgtcttcat tgccgttcaa
     8161 cagattcacg cccacttcgc cgtaatgcgc gccgttcaaa caaatcaagc cgctgttgtc
     8221 gccgtttgcc agccattcgg gattgagttc cgcatgatgg atattgcggt ctttgccgac
     8281 ataggccgcc gttaaaagct cgctcaagcg cagatagccc gcatcgttgc ggataatcag
     8341 catggcgcga aacggcttgt cgggcgcatt cggattgcct atccatacgt ccgccgcgcc
     8401 gacgggctta atccccgcgc tgcggcaggc tttatagaat ttcaccaagc cgaattcgtt
     8461 catcaaatcg ctgatgccca aagcaggcaa accgtattcc tgcgctttgg caatcagttt
     8521 tttaatccgc accataccgt cggtaatcga aaactcggta tgcaggcgca gggggatgta
     8581 ggtcggctcg gtcatggcaa aatcggcgtg aacaataaaa ggcgtattgt agcagggttg
     8641 tctttagatg gcggtgtagg tcatgccgct tcggattcag acggcatgac ctgcaaatgt
     8701 ttttgagctt ttacgacggc aaaaaaatgc ctcctgccgt atggcggagg cttcccaagg
     8761 agtattgata gatataaagg actatcaaac tagttataaa gaactatata ccttattcgg
     8821 acggatggca agcagttaaa ttaattttac gttcaaacag gtttttgatt tcgttttgat
     8881 ggctgatgcc gatgaccagt gtatcgggca gttcgtgttt gaggatgtgc atcagcgtca
     8941 atgcggattc gtcggggaac aggatttgca gtctgccgtt ggacaggatt tctttgatcg
     9001 gatggcggca tatggggttt cagacggcat ttttactttt acggaacagg cggtgcggat
     9061 acatcgctgg ttttgcggta attttgggta cggcggcggc aggtgctaca ataacggtct
     9121 ctttctgcaa ggggacatca tggaagccat cgtctatctc gaagacaacg aatacatcgc
     9181 cctgtgcgac ctcttgaaat tggccggact tgccgaaagc ggcggacagg cgaaggcgtt
     9241 gattgccgaa gggttggtgt cgcgcaacgg cgaaaccgaa atccgcaaaa ccgccaaaat
     9301 acgcggcggc gaagtcatcg agtttgacgg cgcgcgcttg gaaatcgccg atggatacga
     9361 ccctgaagca taaagccgaa gcccttttgg gcgagccgct tttagacgaa cccgtccgcc
     9421 ccgagtcgtg ggaatgctgc ggcagcgact gcggcgacgc gtgcattcag acgatttact
     9481 gggcggacaa ggcccgctac gacgcgcaac ggcggaaatt gaaagaagcg ggttggtcgg
     9541 acgatgccgt ctgaaaacgg ttcggcttga
//
LOCUS       DAWKJW010000061         9356 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.061, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000061 DAWKJW010000000
VERSION     DAWKJW010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9356)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9356)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9356
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.061"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..601
                     /locus_tag="WJJ54_001058"
     CDS             <1..601
                     /locus_tag="WJJ54_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ7341936.1"
                     /translation="FFVLEVTARSATDILGIHPNSAVLFYRKIRTVINYHLALAADEV
                     FEGSVELDESYFGGQRKGRRGRGAAGKVVVFGILKRNGWVYTVVVDNAKSETLLPVIK
                     KKIMPDSIVYTDSLSSCDKLDVSGFIHYRINHSKEFADRQNHINGIENFWNQAKRVLR
                     KYNGIDRKSFPLFLKECEFRFNFGTPSRQLKILQDWCGI"
     gene            814..2349
                     /locus_tag="WJJ54_001059"
     CDS             814..2349
                     /locus_tag="WJJ54_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ7341937.1"
                     /translation="MSDSKTKERATFGTRRAFMIAAIGSAVGLGNIWRFPYIAFENGG
                     GAFILPYLVALLTAGIPLLLLDYAIGHRYRGSAPLAFRRLGRWFEPVGWWNVMTNIVI
                     CIYYAVIIGWAASYTYYSVNAAWGADPQGFFFKDFLQMAGPEALGLDFVGKVAGPLAG
                     VWVFTAAIMALGVQKGVARASSFFMPLLLVMFLIMVGISLTLPGAAKGLDALFTPDWS
                     KLADSKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLGGTGLVVGFANSSFELLAG
                     IGVFAALGFMAQAGGKAVNEVASGGIGLAFIAFPTIINQAPMGWLIGILFFGSLVFAG
                     VTSMISILEVIVAAIQDKLNIGRVNATLLVCIPMGIVSTLLFGTATGLPVLDVMDKFV
                     NTYGIVAAGFVYVAAIIISGRLPELRKHLNALSSIRIGGLWTVCVVVTVVMLGYMLFK
                     DTSGLMEKNYEGYPDGFLSIFGWGMSAALVVFGLLLSLLPWKHGQDFNVKDEHEHEQG
                     EEK"
     gene            2346..2438
                     /locus_tag="WJJ54_001060"
     CDS             2346..2438
                     /locus_tag="WJJ54_001060"
                     /inference="COORDINATES: protein motif:HMM:NF033493.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HEZ7341938.1"
                     /translation="MSTSAIVMMIVSIVIIWGGLLLSLLRLPNE"
     gene            complement(2474..3718)
                     /gene="lysA"
                     /locus_tag="WJJ54_001061"
     CDS             complement(2474..3718)
                     /gene="lysA"
                     /locus_tag="WJJ54_001061"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEZ7341939.1"
                     /translation="MTLFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELS
                     PLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAE
                     IEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAPVSLRVNPDVDAKTHPYISTGLKA
                     NKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA
                     EGIVLEHLDLGGGVGIVYQDEDVPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGS
                     LLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAVETKDIATLTANIVGPIC
                     ETGDFLGKDRTIACEEGDLLLIRSAGAYGASMASNYNARNRAAEVLVNGGGYKLIRRR
                     ETLEQQMANELACLQAEHQNAV"
     gene            complement(3729..3899)
                     /locus_tag="WJJ54_001062"
     CDS             complement(3729..3899)
                     /locus_tag="WJJ54_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEZ7341940.1"
                     /translation="MKYGVFFAAATALLLSACGYKGDLYLPKEGDKARFGVIQTGLQL
                     QGKPQSAPPTQK"
     gene            3970..4293
                     /gene="cyaY"
                     /locus_tag="WJJ54_001063"
     CDS             3970..4293
                     /gene="cyaY"
                     /locus_tag="WJJ54_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HEZ7341941.1"
                     /translation="MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAGD
                     GTQIIVNRHTPNQELWVAAKSGGYHFAEQNGKWLATRDNRDFYDVLNEALSAASGEAV
                     KIAEL"
     gene            4320..5336
                     /locus_tag="WJJ54_001064"
     CDS             4320..5336
                     /locus_tag="WJJ54_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HEZ7341942.1"
                     /translation="MNTRPFYFGLIFIAIIAILANYLGNTDFSHHYHISALIIAILLG
                     MAIGNTIYPQFSTQVEKGVLFAKGVLLRTGIVLYGFRLTFGDIADVGLNAVVTDAIML
                     ISTFFFTALLGIRYLKMDKQLVYLTGAGCSICGAAAVMAAEPVTKAESHKVSVAIAVV
                     VIFGTLAIFTYPLFYTWSQDLINAHQFGIYVGSSVHEVAQVYAIGENIDPIVANTAVI
                     SKMIRVMMLAPFLLMLSWLLTRSDGVSENTSHKITIPWFAVLFIGVAIFNSFDLLPKE
                     LVKLFVEIDSFLLISSMAALGLTTHASAIKKAGLKPFVLGILTYLWLVVGGFLVNYGI
                     SKLI"
     gene            5362..5781
                     /locus_tag="WJJ54_001065"
     CDS             5362..5781
                     /locus_tag="WJJ54_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HEZ7341943.1"
                     /translation="MAQLPLYLTAEIGNFTVGTPKVLESFSKHIPYGVVFEDDGDTGY
                     FYAASQDGILDALHIYNVEDVSDKHIPNHVLILWDDACTIAALCVNDYIHAVYDFVEQ
                     AGYCRNGFPEAGGEWVKVENRVLDDELLDKILSREPT"
     gene            5803..6309
                     /gene="luxS"
                     /locus_tag="WJJ54_001066"
     CDS             5803..6309
                     /gene="luxS"
                     /locus_tag="WJJ54_001066"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HEZ7341944.1"
                     /translation="MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCIPN
                     KEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPSEQQVAD
                     AWLASMQDVLNVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLARKVAVNKNEELT
                     LDEGLLNA"
     gene            6455..9271
                     /gene="polA"
                     /locus_tag="WJJ54_001067"
     CDS             6455..9271
                     /gene="polA"
                     /locus_tag="WJJ54_001067"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEZ7341945.1"
                     /translation="MSNRPTLLLVDGSSYLYRAYHAMGQNLTAPDGAPTGALYGVLNM
                     LRRLRSEYPHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRLTG
                     WPVLVIGQVEADDVIGTLAKQGAEHGLRVIVSTGDKDMAQLVDERVTLVNTMSGETLD
                     IEGVKAKFGVRPDQIRDYLALMGDKVDNVPGVEKCGPKTAVKWLEAYGSLQGVIEHAS
                     EIKGKVGENLRAALPRLPLSYDLVTIKTDVDLHAELSDGIESLRCTTPKWAQLVVDFK
                     RWGFRTWLKEAESNMNTGSTDDLFGSDSIGEQAALNAEMPFEKQAEKATAPERLDYQA
                     VTTEAQFAALLDKLAQADTIGIDTETTSLDAMNAALVGISIAFQAGEAVYIPVGHSLT
                     AAPEQLDLQDVLGRLKPHLGNPALKKIGQNLKYDQHVFANYGIALNGIAGDAMLASYI
                     IESHLGHGLDELSERWLGLETITYESLCGKGAKQIGFADVAIGQATEYAAQDADFALR
                     LEAHLRAQMDEKQLEMYEKMELPVAQVLFEMERNGVQIDRAELTRQSAELGAELMKLE
                     QQAYAAAGQPFNLNSPKQLQEILFDKMGIPTKGLKKTAKGGISTNEAVLEQLAPDYPL
                     PKIILQNRSLAKLKSTYTDKLPEMISPRDNRVHTTYAQAVAITGRLASNNPNLQNIPI
                     RTAEGRRVRRAFTAPQGSVIVSADYSQIELRIMAHLSGDKTLIAAFQNGEDVHRRTAA
                     EVFGIAPENVSSEQRRYAKTINFGLIYGMGQYGLAKSLGIDNISAKNFIDRYFARYPG
                     VAEYMQRTKEQAAAQGFVETLFGRRLYLPDIHNKNANARAGAERAAINAPMQGTASDL
                     IKRAMIDVSRWLSECEASPWDELLQSKLIMQVHDELVLEVVETELDFVKEKLPQIMAK
                     VGGGLLDVPLVAEVGVGENWEEAH"
BASE COUNT         2208 a         2409 c         2453 g         2286 t
ORIGIN      
        1 tttttttgta ctggaagtta ccgcccgttc tgccaccgat attttgggta tccatcccaa
       61 ttcggcagta ctgttctacc gtaaaatccg cacggttatc aactatcatt tggccttggc
      121 tgccgatgag gtttttgagg gttctgtcga gctggacgaa agctatttcg gcggacagcg
      181 taaaggcaga cgtggtcgcg gtgcggcagg aaaagtggtt gttttcggca ttctgaaacg
      241 caacggatgg gtctataccg ttgtggtgga taatgccaag tctgaaacgt tactccctgt
      301 catcaaaaag aaaatcatgc cggacagtat tgtttatacc gatagtctga gcagctgcga
      361 caagttggac gtgagcggtt ttatccatta ccgcatcaac cattccaagg agtttgcaga
      421 ccgtcagaac cacattaacg gcattgagaa cttttggaat caggcaaaac gcgtcttgcg
      481 aaaatacaat ggaatcgatc gcaaatcttt cccgctgttc ttgaaagaat gcgaatttcg
      541 atttaacttc ggcacaccgt cccggcagct aaaaatccta caggattggt gtgggattta
      601 gggctaatct agtacagccc ctaaaatttt tcgttttcaa accttcaccg cttgccatca
      661 gcgttaaatt tttttacgat aagcacatag attgtaaaca atcggtcaca agccggtttg
      721 ttttttcaga agacattatc cctgtcagac gctgtttcta tatattttgc ctataacggc
      781 ttgtttttaa taaataattc aagaggtatc aacgtgtctg attccaagac gaaagaacgc
      841 gccacattcg gcacgcgccg cgcgtttatg attgccgcca tcgggtccgc cgtcggcttg
      901 ggcaatattt ggcgtttccc ctatattgct tttgaaaacg gcggcggcgc gttcatcctg
      961 ccctatctgg tcgcgcttct gacggcgggc atcccgctgc tgctgctcga ttatgccatc
     1021 ggccaccgtt accgtggttc tgcgcccttg gctttccgcc gcctcggacg atggtttgag
     1081 ccggtcggct ggtggaacgt gatgaccaat atcgtcatct gcatctatta cgcggtaatt
     1141 atcggttggg cggcaagcta tacctattat tcggtcaacg ccgcctgggg tgcggatccg
     1201 cagggttttt tctttaagga cttcctgcaa atggcgggcc cggaagcctt gggtttggat
     1261 tttgtcggca aagtcgccgg tcctttggcg ggcgtgtggg tttttaccgc cgccattatg
     1321 gcgttgggcg tgcaaaaggg cgtggcgcgc gcctcgtcgt tctttatgcc gctgcttttg
     1381 gtgatgtttt tgattatggt cggcatttca ctaaccctgc cgggtgcggc aaagggcttg
     1441 gacgcattgt ttacgcccga ctggtcgaaa ctcgccgatt ccaaggtctg ggtggcggca
     1501 tacgggcaga ttttcttttc gctttccatc tgcttcggca ttatggttac ctattcttct
     1561 tatttgaaga aaaaaaccga cttgggcgga acggggctgg tggtcggttt tgccaacagc
     1621 agctttgaac tgctcgcggg catcggcgtg tttgccgcat tgggctttat ggcgcaggcg
     1681 ggcggtaagg cggtcaacga ggttgcctca ggcggcatcg gtttggcgtt tatcgccttt
     1741 ccgaccatta tcaaccaggc accgatgggc tggctgatcg gcatattgtt tttcggttcg
     1801 ctggtattcg ccggcgttac gtcgatgatt tccatccttg aagtgattgt ggcggcgatt
     1861 caggacaagc tgaacatcgg gcgcgtcaac gccacgctgc tggtctgcat tccgatgggc
     1921 attgtttcca cgctgctgtt cggtacggcg acggggctgc cggttttgga cgtgatggac
     1981 aaattcgtca acacctacgg cattgttgcc gccggctttg tttatgttgc cgccatcatc
     2041 atcagcggca ggctgccgga attacgcaag cacctgaacg ctttgtcctc catccgcatc
     2101 ggcggcttgt ggacggtctg cgtcgtggtt accgtcgtga tgctcggcta tatgctgttt
     2161 aaagatacca gcggcctgat ggagaaaaat tacgaaggtt atccggatgg tttcctcagt
     2221 attttcggct gggggatgtc ggcggcgttg gtcgtgttcg ggctgctgct gtcgttgctg
     2281 ccttggaaac acggtcagga tttcaacgtc aaagacgaac acgaacatga acaaggagaa
     2341 gaaaaatgag tacttccgcc attgtgatga tgattgtctc aatcgtgata atctggggag
     2401 ggctgctgct ttccctgtta aggctgccga acgagtaagc ctttagagcg ttaaaaatgc
     2461 cgtctgaacc gcttcagacg gcattttgat gttcggcttg caggcaggcg agttcgtttg
     2521 ccatttgctg ttctaaggtt tcgcgtcggc ggatgagttt gtatccgcca ccgttaacca
     2581 acacttccgc cgcacggttg cgcgcgttgt aattgctcgc catactggct ccgtatgcgc
     2641 ccgcgctgcg gataagcagc aaatcccctt cttcgcaggc gatggtgcgg tctttgccga
     2701 ggaagtcgcc ggtttcgcaa atcggaccga cgatgttggc ggtcagcgtc gcgatgtctt
     2761 tggtttcgac cgcctcgatg tgatgatagg catcataaag cgccgggcgc atcaaatcgt
     2821 tcatcgccgc atcgaccatc acaaagtttt tctcttcgcc gtatttgaca aactcgacgc
     2881 gtgtcagcag cgaacctgcg ttgccgacca ggctgcggcc gggctcaaga atgagtttca
     2941 gacggcgtgt gccgatcagt ttttgaacgg cttgggcata cgcgcccaaa tcaggcacat
     3001 cttcgtcttg gtaaacaatg ccgacgccgc cgcccaagtc caagtgttcc aacacaatgc
     3061 cttcggcggc aagcgcgtca accaaaatca aaatgcgctc gcaggcttcg accagcgggc
     3121 ttaagtcggt cagttgcgaa ccgatgtggc agtcgatgcc gatgattttc aaattgggct
     3181 gttgtgcggc gtggcggtag gcttcgagcg cgtcggcgta ggcgatgccg aatttgttgg
     3241 ctttcagacc tgtggagatg tagggatggg ttttcgcatc gacatcggga ttgacgcgca
     3301 gggagacggg cgcggtttta cccaaacgcg cggcaacttt ctgaatacgg tcgatttcgg
     3361 ggatgctttc catattgaag catttcacgc ctgcattcag cgcgaactcg atttccgcct
     3421 cgcttttgcc tacgcctgaa aatatggttt ttgccgcgtc gccgcctgcc gccaaaacgc
     3481 gtgccaattc gccgccggac acaatgtcaa aaccgctccc caaagaagca aagtgtttga
     3541 tgatgctcag gttgccattg gctttaaccg catagcagac gagcggggag agctcggcaa
     3601 aggcagtttg gtagtgttca aatgcttcgg tcagcgcgga ttggctgtac acataaagcg
     3661 gtgtgccgaa tgcttcggca aggcgggggt aggggacttg ttcgcaaaat agggtcatat
     3721 tttcgttttc atttttgggt tggaggggcg gattgcggtt tgccttgaag ctgcaaaccg
     3781 gtttggatta cgccgaaacg cgccttgtcg ccttctttgg gcaggtagag gtcgcctttg
     3841 taaccgcagg ccgagagcag gagggcggtt gccgccgcaa aaaatacgcc gtatttcatc
     3901 ggtaaacttc cttcataagc gcgaatgtgg caagattcgg catcttaaac aaaaaacacg
     3961 caaaaagcta tgatgaccga aagcgagttt atccgcgcga gcgaagcatt atttgaacac
     4021 atcgaagacc aaatcgacga aaacggctgg gatttcgact gccggtttgc cggaaacgtc
     4081 ctgaccatcg aagccggaga cggcacgcaa atcatcgtca accgccacac gcccaatcag
     4141 gaattgtggg ttgccgccaa aagcggcggc taccatttcg ccgagcaaaa cggcaaatgg
     4201 ctggcaacgc gcgacaaccg cgatttttat gacgttttaa acgaagccct gagcgcggct
     4261 tcgggcgaag cggtaaagat tgccgaattg taatttgagt gttatcacgg aaagaaaaaa
     4321 tgaacacacg tcccttttat ttcggactta tatttatcgc gattatcgct atacttgcta
     4381 actatttagg aaacactgat ttttcccatc attatcatat cagtgcttta attattgcta
     4441 tcttgctggg aatggcaatc ggcaatacca tttatccgca attttcaaca caagtggaaa
     4501 aaggcgtttt gtttgccaaa ggcgtgcttc ttcgcactgg cattgtgctg tatggtttcc
     4561 gcctcacttt tggcgatatt gccgatgtag gattaaatgc tgtcgttacc gatgcaatca
     4621 tgctaatttc aaccttcttt tttaccgcac ttttaggcat tcgttatcta aaaatggata
     4681 aacaattggt ttatctcact ggggcaggtt gcagcatttg cggtgcggca gcagtgatgg
     4741 cggcagagcc tgttaccaaa gcagaatccc ataaagtttc agtggcgatt gccgtagtgg
     4801 tcatttttgg gacgcttgct atttttactt accccttgtt ctacacgtgg tcacaagatt
     4861 taattaacgc ccatcaattc ggtatttatg ttggttctag tgtacacgaa gtggctcaag
     4921 tttatgcgat tggggaaaat attgatccta tcgtggcgaa tactgccgtc atttccaaaa
     4981 tgatccgagt gatgatgctc gccccctttt tattaatgct ttcttggtta ttaacacgta
     5041 gtgatggggt atcagaaaat acctcacaca aaattacaat tccttggttt gctgtacttt
     5101 ttattggtgt tgccattttt aattcttttg atttattacc aaaagaactc gtgaaattat
     5161 tcgttgaaat cgattctttc ttattaattt catcaatggc tgcgcttggc ttaacgacgc
     5221 acgcaagcgc aatcaaaaag gcaggattaa aaccgtttgt tttaggaata ctaacttatt
     5281 tatggctagt ggttggtgga tttttagtga actatggaat atcaaaatta atataaaatt
     5341 cactaaagag agcgttaccc aatggcacaa ttaccgctat atctgactgc cgaaatcgga
     5401 aattttactg tcggcacgcc taaagtttta gaatcatttt ccaaacatat cccttatggt
     5461 gtcgtctttg aagacgacgg cgacacgggc tacttctatg ctgcttcgca agacgggatt
     5521 ttagatgcct tgcacatcta caatgtcgaa gatgtatccg acaaacatat ccccaatcat
     5581 gtcttgattt tatgggatga tgcctgcacc atagccgcat tgtgtgtcaa cgactacatt
     5641 catgccgtct atgattttgt cgaacaggca ggatattgcc gcaacggctt ccctgaagca
     5701 ggcggcgaat gggtgaaagt cgaaaaccgc gtcttggatg atgaattgct ggacaaaatc
     5761 ctatcccgag aacctacata acccgcacaa aaggataccc aaatgcccct actagacagt
     5821 ttcaaagtcg atcacacccg tatgcatgcc cccgccgtac gcgtggcgaa aaccatgacc
     5881 acgcccaaag gcgacaccat taccgtgttc gacctgcgct tttgcattcc caacaaagaa
     5941 atcctgcctg aaaaaggcat acacacgctg gagcatttgt tcgcaggttt tatgcgcgac
     6001 cacttgaacg gcaacggcgt ggaaatcatc gacatttccc cgatgggctg ccgcaccggt
     6061 ttttatatga gccttatcgg cacgccttcc gaacagcagg tcgccgatgc gtggctggct
     6121 tcgatgcagg atgttttgaa tgtcaaagac caaagcaaaa tccccgagtt gaacgaatac
     6181 caatgcggca cttatcaaat gcactcgctc gccgaagcgc agcaaatcgc gcaaaacgtg
     6241 ttggcgcgca aagtggcggt gaacaaaaac gaagagctga cgctggatga agggctgctg
     6301 aacgcctaat ccgccaaaaa tgccgtctga acaagggttt cagacggcat ttgccttttc
     6361 cgttataatc tggggttgtg cgggggcggg ttttaagccg gcatcgtcct tccctatttt
     6421 tttctgtccc ttatcggttt taagcgggtt ttttatgtcc aacagaccta cactcctcct
     6481 cgttgacggc tcttcctatc tctaccgcgc gtatcacgcg atggggcaaa acctgaccgc
     6541 acccgacggt gcaccgacgg gcgcgctgta tggcgtattg aatatgttgc gccgtttgcg
     6601 gtcggaatat ccgcacgatt attgcgcggt ggtttttgat gcgaaaggca aaaatttccg
     6661 ccatcaaatg tttgaagaat acaaggcgac gcgcccgccg atgcccgacg atttgcgccc
     6721 gcaggcggaa gcactgccgg atttagtgcg cctgacgggc tggccggtat tggtgattgg
     6781 gcaagtggag gcggacgatg tgatcggcac gctggcgaaa cagggggcgg aacatggttt
     6841 gcgagtcatt gtttcgaccg gcgataagga catggcgcag ttggtggatg agcgcgttac
     6901 gctggtgaac acgatgagcg gagaaacgct ggatattgaa ggcgtgaagg caaaattcgg
     6961 cgtgcgtccc gaccaaatcc gcgattatct cgcgctgatg ggcgacaagg tggacaacgt
     7021 gccgggcgtg gaaaaatgcg gcccgaaaac ggcggtgaag tggctggaag cctacggctc
     7081 gttgcaaggc gtgatagaac acgcttcgga aatcaagggc aaagtgggcg agaatctgcg
     7141 tgccgccctg ccgcgcctgc cgctgtcgta tgacttagta acgattaaaa ccgatgtgga
     7201 cttgcacgcc gagctttcag acggcatcga aagcctgcgc tgtactacgc cgaaatgggc
     7261 gcagctggtt gtcgatttca aacgctgggg cttccgcacc tggctgaaag aagcggaatc
     7321 aaacatgaat accggctcga ccgatgattt gttcggcagc gacagcatcg gcgagcaggc
     7381 ggctttgaat gcggaaatgc cgtttgaaaa acaagccgaa aaagccaccg cccccgaaag
     7441 gctggattat caagccgtta ccaccgaagc gcagtttgcc gctttgttgg acaaactggc
     7501 tcaggcggac acaatcggca ttgatacgga aaccacgtca ttagacgcga tgaacgccgc
     7561 gctggtcggc atcagcattg cgttccaagc aggcgaagcg gtttacatcc ccgtaggaca
     7621 cagcctgacc gccgcgcctg aacagcttga tttacaagac gtattaggcc gtctgaaacc
     7681 gcatttggga aaccccgccc taaaaaaaat cgggcaaaac ctcaaatacg accaacacgt
     7741 tttcgccaac tacggcatcg ccctgaacgg cattgccggc gacgccatgc tcgcttccta
     7801 catcatcgag agccatctcg gacacggctt ggacgaattg tccgaacgct ggctgggctt
     7861 ggaaaccatt acctacgaat cgttgtgcgg caaaggcgcg aagcaaatcg gttttgccga
     7921 tgtcgccatc gggcaggcga ccgaatacgc cgcccaagac gccgatttcg ccctgcgcct
     7981 cgaagcgcac ctgcgcgcgc aaatggacga aaaacagctt gaaatgtatg aaaaaatgga
     8041 gctacccgtc gcgcaggtat tgtttgaaat ggaacgcaac ggcgtgcaaa ttgaccgcgc
     8101 cgaactcacc cgccaaagtg cggaactcgg cgcggagctg atgaagctcg aacaacaagc
     8161 ctacgccgcc gcaggccagc cgttcaacct caattcgccc aaacagctgc aagaaatcct
     8221 gttcgacaaa atgggcatcc cgacaaaagg gctgaaaaaa actgccaaag gcggcatttc
     8281 caccaacgaa gccgtgctcg aacagctcgc gcccgactac cccctgccca aaatcatcct
     8341 gcaaaaccgc agcctggcga aactcaaatc cacctacacc gacaaactgc ccgaaatgat
     8401 ttctccccgg gataaccgcg tgcataccac ctacgcccaa gccgtcgcca ttacaggacg
     8461 cttggcaagc aacaacccca acctgcaaaa catccccatc cgcaccgccg aaggccgccg
     8521 cgtacgtcgc gcctttaccg caccgcaagg cagcgtcatc gtttccgccg actattccca
     8581 aatcgagctg cgcatcatgg cgcacctctc tggcgacaaa accctcatcg ctgcgttcca
     8641 aaacggcgaa gacgtacacc gccgcaccgc cgccgaagtg ttcggcatcg cccccgaaaa
     8701 cgtctcgtcc gaacaacgcc gctacgccaa aaccatcaac ttcggcctca tttacggcat
     8761 gggccaatac ggcctcgcca aatcattggg catcgacaac atctccgcca aaaactttat
     8821 cgaccgctac ttcgcccgct atcccggcgt cgccgaatac atgcagcgca ccaaagaaca
     8881 agccgccgca caaggctttg tcgaaaccct gttcggcaga aggctctacc tgcccgacat
     8941 ccacaacaaa aacgccaacg cccgcgccgg agccgaacgc gccgccatca acgcccccat
     9001 gcaaggcacc gcctccgacc tcatcaaacg cgccatgata gacgtgtccc gctggctttc
     9061 agagtgcgaa gcctccccgt gggacgaact cttacaaagc aaactgatta tgcaggtgca
     9121 tgacgaactg gtgctggaag tcgttgaaac cgaactggat tttgtcaaag aaaaactgcc
     9181 gcagattatg gcgaaagtgg gcggcggatt attggatgta ccgctggtgg ctgaggttgg
     9241 cgtaggggag aattgggaag aggcacattg attgaaaggt gttatatgct atctttattt
     9301 aaataaaatt taatttttgg tatatttttt ctaaatgttc ctatagtata gtggat
//
LOCUS       DAWKJW010000062         9332 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.062, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000062 DAWKJW010000000
VERSION     DAWKJW010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9332
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.062"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            128..337
                     /locus_tag="WJJ54_001068"
     CDS             128..337
                     /locus_tag="WJJ54_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HEZ7341946.1"
                     /translation="MPYVNIKVTGGKEAPTAAQKAELIGGVTELLARVLGKNPETTVV
                     VIDEVDTDNWGIGGKSVSERRKEGR"
     gene            426..1640
                     /locus_tag="WJJ54_001069"
     CDS             426..1640
                     /locus_tag="WJJ54_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEZ7341947.1"
                     /translation="MDKFPKSAKLDHVCYDIRGPVHKKALQLEEEGNKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTSQGYCDSKGLYSARKAIVHYYQTKGLRDITVDDVYIGN
                     GVSELITMSMQALLNDGDEILIPAPDYPLWTAAATLAGGTVRHYLCDEENGWFPNLAD
                     MEAKITPKTKAIVVINPNNPTGAVYSREILLEIAELARKHGLIIFADEIYDKILYDGA
                     VHHHIAALAPDLLTVTFNGLSKSYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNRAWELVSQIPGVSCVKPMGAMYM
                     FPKIDTEMYRIRDDMKFVYDLLVREKVLLVQGTGFNWIKPDHFRIVTLPYVHQIEEAM
                     GRLARFLQTYRQ"
     gene            complement(1727..4306)
                     /gene="clpB"
                     /locus_tag="WJJ54_001070"
     CDS             complement(1727..4306)
                     /gene="clpB"
                     /locus_tag="WJJ54_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEZ7341948.1"
                     /translation="MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNS
                     GAAALLAHAGVNVPQVKQRLQQHLNSLPKVSGQGGDILPSRELQAVLNLMDKAATKRG
                     DAYIASELFLLALVQQNDAAGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
                     LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIF
                     IDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ
                     KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID
                     LIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEING
                     LQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEH
                     LEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKM
                     EEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAG
                     FLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE
                     VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV
                     KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTV
                     SDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRL
                     KFA"
     gene            4567..5577
                     /gene="trpS"
                     /locus_tag="WJJ54_001071"
     CDS             4567..5577
                     /gene="trpS"
                     /locus_tag="WJJ54_001071"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEZ7341949.1"
                     /translation="MSKKRVLTGVTTTGIPHLGNYVGAIRPAVRAAQNLDTESFLFLA
                     DYHGIIKCHEPEMIHQSTQAVAATWLACGLNPEQTTFYRQSDIPEVMELNWILTCITA
                     KGLMNRAHAYKAAVQANAENGQEDPDFGVEMGLFSYPILMTADILMFNANEVPVGRDQ
                     IQHVEMARDIAGRFNHRFRELFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND
                     KKTQKSVNKIITNMKEPGEPKQPDESPLFEIYKAFSTPSETVEFTKMLADGLAWGEAK
                     KLLAAKINAELAEPRERYNALTADPSQIEEILQAGAQKARKEARELLDKVRDAVGIRP
                     LK"
     gene            5583..5924
                     /locus_tag="WJJ54_001072"
     CDS             5583..5924
                     /locus_tag="WJJ54_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341950.1"
                     /translation="MPSEPLKGLPEQNVVRLTGKHPNDLEAVSGKCMETDDKGGPVGW
                     AENGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQNGRYVLEIDS
                     EGAFYFRRRHY"
     gene            6245..6610
                     /locus_tag="WJJ54_001073"
     CDS             6245..6610
                     /locus_tag="WJJ54_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341951.1"
                     /translation="MKKLLIAAMMAAALAACSQEAKQEVKEAVQAVESDVKDTAASAA
                     ESAASAVEEAKDQVKDAAADAKASAEEAVTEAKEAVTEAKEAVTEAKEAVTEAAKDTL
                     NKAADATQEAADKMKDAAK"
     gene            complement(6819..8327)
                     /gene="ppx"
                     /locus_tag="WJJ54_001074"
     CDS             complement(6819..8327)
                     /gene="ppx"
                     /locus_tag="WJJ54_001074"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HEZ7341952.1"
                     /translation="MTTTPANILASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFA
                     AGLDEQKNLSAASQEQALDCLAKFGERLRGFRPEQVRAVATNTFRVAKNIADFLPKAE
                     AALGFPIEIIAGREEARLIYTGVIHTLPPGGGKMLVIDIGGGSTEFVIGSTLNPDITE
                     SLPLGCVTHSLRFFQNKITAKDFQSAISAARNEIQRISKNMRREGWDFAVGTSGSAKS
                     IRDVLAAEMPQEADITYKGMRALAERIIEAGSVKKAKFENLKPERIEVFAGGLAVMMA
                     AFEEMKLDRMTVTEAALRDGVFYDLIGRGLNEDMRGQTVAEFQHRYHVSLNQAKRTAE
                     TAQTFMDSLCHAKNVTVQELALWQQYLGRAAALHEIGLDIAHTGYHKHSAYILENADM
                     PGFSRKEQTILAQLVIGHRGDMKKMSGIIGTNEMLWYAVLSLRLAALFCRSRQDLSFP
                     KNMQLRTDTESCGFILRIDREWLERHPLIADALEYESVQWQKINMPFKVEAV"
     gene            complement(8444..9175)
                     /locus_tag="WJJ54_001075"
     CDS             complement(8444..9175)
                     /locus_tag="WJJ54_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ7341953.1"
                     /translation="MSREINAGGHHFLYGGISGGGVHYWDNKDFSEQCLRLSLGYKNR
                     SVTRSFGIVPFVGQNLLGGSRYNFVGGFNADFSQRLGEHWRLTLNAGNMWKRYQADRT
                     AARYDSHMPLAGATLMYSAPKDWLLYGSADWSHDITKEAEQASIRKGLRVGAVKTFDG
                     GLGLRANLRYTRRTFDAPGTIVYRFPRKDHEYQANLSLWHDKISWKGFTPQLNFRYLK
                     IDSNMKSFYTRKNTQIFMSVEKDFK"
BASE COUNT         2170 a         2411 c         2449 g         2302 t
ORIGIN      
        1 ctcgtcgcct tgtcctgatt tttgttaatc cactatatcg atttgaattt ttcagaaaat
       61 gaagcggacg tttgggcgga ggcaacttgt ttgataagat agcaatattt caaaacggag
      121 aaagatcatg ccttatgtca atattaaagt aaccggcggc aaggaagcac cgactgccgc
      181 gcaaaaagcg gaactgatcg gcggcgtaac cgaattgctg gcacgcgtgc tgggcaaaaa
      241 tcccgaaaca acggttgtcg tgattgatga agtggatacc gataactggg gaataggcgg
      301 caaaagcgtc agcgaacggc gcaaagaggg caggtaaaaa gcctgaaaat ctcggtttga
      361 tgctttaaat tccgcgtgaa aaagagtaca ttcccaccca ttgcccaaaa tttacggaac
      421 acatcatgga taaatttccc aagtctgcaa agctcgatca cgtctgttac gacatacgcg
      481 ggccggttca caaaaaagca cttcagttgg aagaggaggg caataaaatc cttaaactca
      541 atatcggcaa ccctgcgccg ttcggctttg aagcccctga tgaaatcttg gtcgatgtca
      601 tccgcaacct gccgacttcg caaggctatt gcgattctaa agggctgtat tccgcccgca
      661 aagccattgt tcactactat cagaccaaag gtttgcgcga tattacggtt gatgatgtct
      721 atatcggcaa cggcgtgtcc gagctgatta cgatgtctat gcaggcattg ctcaacgacg
      781 gcgacgaaat cctgattccc gcgcccgact accctttgtg gacggcggcg gcaacgcttg
      841 cgggcggtac ggtacgccat tatctgtgcg acgaagaaaa cggctggttc cccaaccttg
      901 ccgatatgga agccaaaatc acgcccaaaa ccaaagccat cgtcgtcatc aatcccaata
      961 atccgacagg cgcggtgtac agcagggaaa tcctgttgga aatcgccgaa ctggcgcgca
     1021 agcacggttt gattattttc gccgacgaga tttacgataa aatcctttat gacggcgcgg
     1081 ttcaccacca catcgccgcg cttgcccccg accttttgac ggtaacgttc aacggtttgt
     1141 ccaaatccta ccgcgtcgcc ggcttccgcc aaggctggat ggtgctcaac gggccgaaac
     1201 atcacgcaaa aggttacatc gagggtttgg atatgctctc gtccatgcgc ctgtgtgcca
     1261 atacgccgat gcagcatgcg attcagacgg cattgggcgg ctatcagagc attaacgaat
     1321 tcatcttgcc gggcgggcgg cttttggaac agcgcaacag ggcgtgggaa ctggtcagcc
     1381 aaatccccgg cgtgtcctgc gtcaaaccga tgggcgcgat gtatatgttc ccgaaaatcg
     1441 ataccgaaat gtaccgcatc cgcgatgaca tgaaattcgt ttacgatttg ctggtgcgcg
     1501 aaaaagtctt gctggtgcag ggaacggggt ttaattggat caagcccgac catttccgca
     1561 ttgtcacgct gccttacgtc catcagattg aagaggcgat gggcaggctg gcaagattcc
     1621 tgcaaaccta ccgccaataa ggggacggtt tgtctgccga ggataaaaaa tgccgtctga
     1681 aacggagatt cccgtttcag acggcatttt caacagcagg aacgaatcag gcaaatttca
     1741 gtctgtcgcc gtcggcttct accctgattt cgctttcggg cgcatagttt ccggcaagca
     1801 gggcttttgc cagcgggttt tcgatttccg actggatggc gcgtttgagt ggacgtgcgc
     1861 cgtaaatcgg gtcgaaaccg gctttggcga tgatgtccag tgcggcatcg gaaacagtca
     1921 ggcgcaggtt ttgtttttcc aaacgttttt ccaaaccttt gagctggatt ttcgcaatgc
     1981 tgcggatgtt tgcctgatcc agtccgtgga acacgactac ttcgtcgata cggttgatca
     2041 tttctggacg gaaatgttct ttcacatcct ccatcacaac ttcttttacc gcttcgtagt
     2101 cctgaatgcc catttgttgg atgtgctggc tgccaatgtt ggaagtcatc acaatcacgg
     2161 tatttttaaa atctacggta cggccttgtc cgtcggtcaa gcggccgtca tccaatactt
     2221 gcagcaggat gttgaacaca tcgggatggg ctttttccac ttcgtccaaa agaatcacgc
     2281 tgtacggttt gcggcgcact tgttcggtca ggtagccgcc ttcttcgtag ccgacataac
     2341 ccggaggcgc gccgattaag cgggcaacgg cgtgtttttc catatattcg gacatatcga
     2401 tgcgaatcag atgatcttcg ctgtcgaaca gaaagcctgc cagggcttta cacaactcgg
     2461 ttttacccac gccggtcggg cccaagaaca ggaagctgcc gtaaggcttg ttcggatcgg
     2521 caagaccgga gcggctgcgg cggatagcgt cggacacggc acgcacggct tcgtcctgtc
     2581 cgaccacgcg gcggtgcaat acttcttcca ttttcagcag tttgtcgcgt tcgccttcca
     2641 tcattttgga tacgggaatg ccggtcatac gggaaaccac ctctgcgatt tcctctgcgc
     2701 cgacattatt acgcaagagt ttgtttgccg gttttgtgct gtccgtatct gcccgttcgg
     2761 cggctgcacg ctgtttttcc aaatgctcca aatcttcata catcaatttt gaagccagtg
     2821 ccaaatcgcc ttgccgtttt gcctgttcga ttttaatttt gacttcgtca atttgtttct
     2881 taatattagc agcaccgtct gaaattgctt tttcggcttt ccagatttcg tctaaatcgg
     2941 cgtattcttt ttgcagaccg ttgatttcct cgtctatcag ttccaaacgt tttttgctgg
     3001 catcgtcttt ttctttttca acgtgcgcct tttccatccg aagctgaatt agacggcggt
     3061 cgattttgtc cattgcttcc ggcttggttt ctttttccat cttgacacgg ctggcggctt
     3121 cgtcaatcaa atcaatcgct ttatcaggca ggaagcggtc ggtaatgtag cggtcgctca
     3181 actccgctgc ggcaacgata gcagggtcgg taatatcgat accgtggtgg atttcataac
     3241 gctcctgtaa accgcgcaag atagcgatgg tgtcttctac acttggctcg ccgaccaata
     3301 ctttttggaa gcggcgttcg agtgccgcgt ctttttcgat gtattggcgg tattcgtcca
     3361 aagtagttgc accgatacag tgcaattcgc cgcgtgccaa agccggtttc aacatattac
     3421 ccgcgtccat cgcgccgtcg gttttacctg caccaaccaa agtatgaatt tcgtcaatga
     3481 aaatcagagt gttgccatcg tctttagcca agtcgttcaa cacgcctttc aagcgttctt
     3541 caaattcgcc gcggtatttc gcaccggcaa tcaaagccgc caagtccaga accaaaaggc
     3601 gtttattacg cagggattca ggtacttcgc cattgacgat gcgttgtgcc aaaccttcga
     3661 cgatggcggt tttacccacg cccggttcgc caatcagcac agggttgttt ttggtacggc
     3721 gttgcaatac ctgaatcgca cggcggattt cgtcgtcacg gccgataacg gggtcgagct
     3781 taccgtctcg ggcgcgttgg gtcagatcga gcgtatattt tttcaaagca tcgcgttggt
     3841 cttcggcatt ggcatcgttc acgttttgtc ctcctcgtac cgcgtcaatc gcggcattga
     3901 tgttttgttc ggtcgcgccg gcttctttca aaattttgcc ggccgcatcg ttctgctgca
     3961 ccaaggcaag caggaaaagt tcactggcga tataggcatc accgcgtttg gtggcagcct
     4021 tgtccatcag gttcaacacc gcctgcaatt cgcggctggg cagaatgtcg ccgccctggc
     4081 cggacacttt cggcaggctg ttcaaatgct gctgcaaacg ctgtttcacc tgcggcacgt
     4141 tcacgcccgc atgagccaag agcgcggcgg ctccactgtt ttggtcgtca agcagggctt
     4201 ttaacacaaa gcccgcttcc agatagctgc cgtccgcagc caacgccaaa ctctgagctt
     4261 ctgcaagggc ttgttggaat ttggcggtta atttgtcgta tcgcattttc gtttcctttt
     4321 caaaatgtcc gctgtcgaag cctatatgtg catcattgtg gataactcaa gttctgtttt
     4381 ctgtttttct atatttaatt cgatatatca ttgaatttaa agtatataaa aatgtataat
     4441 aatgtgtata actatatctt cttaatatgg aaaagtctgt tgtcggctgg atgtaggtgg
     4501 caaatcgggt ataatcggcg catctttttc cctttcagac ggcattgatg ccgcaaggac
     4561 atttttatga gcaaaaaacg agttctgacc ggcgtaacca ccaccggcat cccgcatttg
     4621 ggcaactacg tcggcgccat ccgccccgcc gtccgcgcgg cgcaaaacct cgataccgaa
     4681 tccttcctct tcctcgccga ttaccacggt atcatcaaat gccacgagcc ggagatgatt
     4741 caccaatcca cccaagctgt tgccgccaca tggctcgcct gcggactcaa tccggaacag
     4801 accactttct accgtcaaag cgacattccc gaagtgatgg agttgaactg gattctgacc
     4861 tgcatcaccg ccaagggttt gatgaaccgc gcccatgcct acaaagccgc cgtgcaggca
     4921 aatgcagaaa acgggcagga agaccctgat ttcggtgtgg aaatgggttt gttcagttat
     4981 ccgattctga tgactgctga tattctgatg ttcaacgcca acgaagtccc cgtcgggcgc
     5041 gaccaaatcc aacacgtcga aatggcgcgc gacattgccg gccgcttcaa tcaccgcttc
     5101 cgagaactct tcaccctgcc cgaagtgaaa atcgacgaaa acgtcgaact cttggtcggt
     5161 ttggacggac gcaaaatgtc caaatcctac ggcaacacca ttccgctttg ggaaaacgac
     5221 aaaaaaaccc aaaaatcggt caacaaaatc atcaccaata tgaaagagcc gggcgagccg
     5281 aaacagcccg acgaaagccc attgtttgaa atctacaaag ccttctccac accgtctgaa
     5341 acggtggaat ttacgaaaat gcttgccgac ggcttggctt ggggcgaggc aaaaaaactt
     5401 ttggcggcga aaatcaacgc cgaactcgcc gaaccgcgcg aacgctacaa cgcattgacc
     5461 gccgaccctt cgcaaatcga agagattttg caggcaggcg cgcaaaaagc gcgtaaagaa
     5521 gcacgcgaat tgttggacaa agtacgcgat gcggtcggca tccgcccgtt gaaataaacc
     5581 cgatgccgtc cgaacctctt aaaggcttgc cggaacaaaa cgtcgtccgg ctgaccggca
     5641 agcatcccaa cgacttggaa gccgtcagcg gcaaatgcat ggaaaccgac gataagggcg
     5701 gtccggtagg ctgggcggaa aacggcgtgt gccatacctt gtttgccaaa ctggtgggca
     5761 atatcgccga agacggcggc aaactgacgg attacctgat ttcgcattcc gccctgcaac
     5821 cctatcaggc aggcaaaagc ggctatgccg ccgtgcagaa cggacgctat gtgctggaaa
     5881 tcgacagcga gggggcgttt tatttccgcc gccgccatta ttgaggtatt cggacatccc
     5941 ggaatatatt tggttttttc aaaccctgca ggaaaaagtc cgcaccgtcg ggaaactcaa
     6001 aaggaggggg atatgtgtta caattttccg aactgttttc ataaaatagt tttcggacgt
     6061 gtttcaatat ggcattgatg ccgccttatt gttcgagaaa aaaaaccttt atatttaaat
     6121 ataatgggtt ttaactaaac gggaaaccgt tttctctccg gccgatgggc aaaatcagcc
     6181 gattgatgga acacggtccg atttttaagc aaaaccttaa tcaacaactc aagaaggata
     6241 agacatgaaa aaattattga ttgccgcaat gatggcggct gccttggcag cttgttcgca
     6301 agaagccaaa caggaggtta aggaagcggt tcaagccgtt gagtccgatg ttaaagacac
     6361 tgcggcttct gccgccgagt ctgccgcttc tgccgtcgaa gaagcgaaag accaagtcaa
     6421 agatgctgcg gctgatgcaa aggcaagtgc cgaggaagct gtaactgaag ccaaagaagc
     6481 tgtaactgaa gccaaagaag ctgtaactga agccaaagaa gctgtaactg aagcagctaa
     6541 agatactttg aacaaagctg ccgacgcgac tcaggaagcg gcagacaaaa tgaaagatgc
     6601 cgccaaataa tttgttgcct tggcaaaaat gatgggatgc cgcctgccgg caacccaaac
     6661 gaaaccgcct gaagattttc aggcggtttt tgagttgtat gccccttgtt ttttacgcct
     6721 gcatgaccgt tccgagcaga tgtgccgcgc atatcgggat gttgcggaca gggaaatgcc
     6781 gtctgaacat cattcagacg gcatttgccc cgcaaggttc agacggcctc gactttgaac
     6841 ggcatattga ttttttgcca ttggacgctt tcatattcca atgcgtcggc aatcagggga
     6901 tggcgttcca gccattccct gtcaatacgc aggatgaagc cgcagctttc cgtgtccgta
     6961 cgcaactgca tatttttcgg gaaagacagg tcttggcgcg aacggcagaa cagtgcggca
     7021 aggcgcagcg acaaaacggc ataccacaac atttcgttgg tgccgatgat gccgctcatt
     7081 tttttcatat cgccgcgatg accgatgacc agttgggcaa gtatggtctg ttctttgcgt
     7141 gagaaacccg gcatatcggc gttttcgagg atgtaggcgg aatgcttgtg atagccggtg
     7201 tgggcgatgt ccaaaccgat ttcgtgcagc gcggcggcgc gtccgagata ctgttgccac
     7261 aaggcaagct cttgaactgt aacgttttta gcgtggcaga ggctgtccat aaaggtttgc
     7321 gcggtctcgg cggtgcgttt cgcctgattg aggctgacgt ggtagcggtg ttggaactcg
     7381 gcaaccgttt gtccgcgcat atcttcgttt aaaccgcgcc cgatcaaatc gtaaaacacg
     7441 ccgtcgcgca gggcggcttc ggttacggtc atcctgtcga gtttcatttc ctcaaacgcc
     7501 gccatcatca cggcaagtcc gccggcaaaa acttcgatgc gttccggttt caggttttca
     7561 aatttggctt ttttgaccga accggcttcg atgatgcgtt cggcgagggc gcgcattcct
     7621 ttgtaggtaa tgtccgcctc ttggggcatt tcggcggcaa gcacgtcgcg gatggatttt
     7681 gccgaacccg atgtgccgac ggcgaaatcc caaccttcgc gcctcatatt tttgctgatg
     7741 cgctggattt cgttgcgggc ggcggaaatg gcagattgga agtctttggc ggtgattttg
     7801 ttttggaaga agcgcaggct gtgggttacg cagcccaagg gcaggctttc agtaatgtcg
     7861 ggattcagcg tcgagccgat gacaaattct gtcgaaccgc cgccgatgtc gataaccagc
     7921 attttgccgc cgcccggggg gagggtgtgg atcacgccgg tataaatcag ccgcgcctct
     7981 tcgcgcccgg cgatgatttc gatggggaaa cccagtgccg cttcggcttt gggaaggaaa
     8041 tctgcgatgt ttttggcgac gcggaatgta ttggttgcca cggcgcgtac ctgttcaggg
     8101 cggaagccgc gcaggcgttc gccgaatttt gccagacagt ccaaagcctg ttcttgggaa
     8161 gcggcactca ggtttttctg ttcgtccagt ccggcggcga agcgcaccat ctgtttgaac
     8221 gaatcgatga ctttcaactg tccgttgttg ttttcgcaaa tctggaggcg gaaactgttg
     8281 gaacccaaat cgacggaggc gaggatgttt gcgggggtgg tggtcatggc ggatatcggt
     8341 gggggaaaaa cgcaatgtta ctctgacggc gcaggcgttg acaataaatg atgaggttgt
     8401 ttttgattct gcccacggat gttgccgacg gcattttttg cgcttatttg aaatcctttt
     8461 ccacgctcat gaaaatctgc gtgtttttgc gtgtgtaaaa acttttcata ttgctgtcga
     8521 ttttcagata gcggaaattg agttgcggcg taaatccctt ccaagagatt ttgtcgtgcc
     8581 acaacgacag gtttgcctga tattcgtggt ctttacgcgg gaagcggtac acaatggtcc
     8641 cgggtgcatc aaaagtcctg cgggtatagc gcaggtttgc ccgcagaccc agcccgccgt
     8701 cgaacgtttt gaccgcgccg acacgcaaac ccttgcggat ggaagcctgt tccgcctctt
     8761 tcgttatgtc gtgcgaccag tccgcactgc cgtaaagcag ccagtctttc ggcgcggaat
     8821 acatcagcgt cgcacccgcc agcggcatat ggctgtcgta tcgggcggcg gtgcggtctg
     8881 cctgataacg cttccacata ttgcccgcgt ttagtgtcag ccgccagtgt tcgcccaagc
     8941 gttgggagaa atcggcattg aagccgccga cgaaattgta tcggctgccg cctaagaggt
     9001 tttgcccgac aaacggcacg atgccgaacg agcgcgttac cgaacgattt ttatagccga
     9061 gcgacaggcg caggcactgt tcgctgaaat ctttgttatc ccaataatgc acgccgccgc
     9121 cgctgatgcc gccgtagagg aaatgatgcc cgcccgcatt gatttcgcgc gacacgccta
     9181 agccctagcg caaaccgtgt gccttttgcg gcaggctgtc ggcggttttc gtccagcttc
     9241 tgcccgcaaa ttcaatcgtt tttttggacg aagcgttgtt tatagcggat taacaaaaat
     9301 caggacaagg cgacgaagcc gcagacagta ca
//
LOCUS       DAWKJW010000063         9290 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.063, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000063 DAWKJW010000000
VERSION     DAWKJW010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9290
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.063"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..388)
                     /locus_tag="WJJ54_001076"
     CDS             complement(<1..388)
                     /locus_tag="WJJ54_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1971 domain-containing protein"
                     /protein_id="HEZ7341954.1"
                     /translation="MKERIVGQSGELFCFGQMPVWKVENLPEILLSGYSSEEGEWVCL
                     NVLQGDVEVRAPDGAAEVWSAESGDCVFAPQQVFSVKPKTDDAEIRLSLYCAAADYFH
                     KKYGMSATHSAVAAAQDTVPAGRALDM"
     gene            501..938
                     /gene="rnhA"
                     /locus_tag="WJJ54_001077"
     CDS             501..938
                     /gene="rnhA"
                     /locus_tag="WJJ54_001077"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEZ7341955.1"
                     /translation="MDTPVYLYTDGACKGNPGAGGWGVLMRYGSHEKELFGGEAQTTN
                     NRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDD
                     LWKELDALVGRHQVSWTWVKGHAGHAENEHADDLANRGAAQFS"
     gene            complement(1011..1424)
                     /locus_tag="WJJ54_001078"
     CDS             complement(1011..1424)
                     /locus_tag="WJJ54_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341956.1"
                     /translation="MNKFLATWLAPILVLSGCATIMGESSQTVPIKSQPSGAVFKIQD
                     ETGVIVQSGVTPANVSLPKGNGKYFGRKKYQVSFEKKGYQPLVYKLETNPNGWYIGGN
                     LIFGGLIGYLIVDPLSNGKMFTISPKQVDVPLIAK"
     gene            1549..1929
                     /locus_tag="WJJ54_001079"
     CDS             1549..1929
                     /locus_tag="WJJ54_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7341957.1"
                     /translation="MSKSTIGYKMVQLLATEADRLIGEKIRQRRKELGYSAEKLAEHI
                     NLSQQQISRYERGVGKINISHLVDIAVFLETPIAWFFQDCLPKPLTVACTPENTPEQQ
                     WHSLNPNQKAAFAAFLDTLRNKET"
     gene            1926..2330
                     /locus_tag="WJJ54_001080"
     CDS             1926..2330
                     /locus_tag="WJJ54_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HEZ7341958.1"
                     /translation="MNTKPCPICTAQDEDILLQTPNLRVIAVHNDSGSPAFCRVIWRK
                     HIAEMTDLSAAERGELMEMVYKVEAAMRQVFQPAKINLASLGNVVPHLHWHIIARFEN
                     DASFPAPIWANPVRKHGMTLPQDWTEQLKKLL"
     gene            2370..3554
                     /locus_tag="WJJ54_001081"
     CDS             2370..3554
                     /locus_tag="WJJ54_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEZ7341959.1"
                     /translation="MTEPTSRRRFLKTCTAAAGAGLLQACGTSATSVPPLPSSHSVVK
                     ARTVPLQTPRRQSSDGNLLRVVASSGFAEDTNRVNTALTRLYNAGFTVTNQQAGSRRF
                     QRFAGTDAQRVADFQEVASGRVATPKVLMGLRGGYGAARILPHIDFASLGARMREHGT
                     LFFGFSDVCAVQLALLAKGNMMSFAGPMAYSDFGKPAPGAFTMDAFIKGATQNRLTVD
                     VPYIQRADVETEGILWGGNLSVLASLAGTPYMPDIDGGILFLEDVGEQPYRIERMLNT
                     LYLSGILKKQHAIVFGNFRMEKIRDVYDPSYDFSAVANHVSRTAKIPVLTGFPFGHIA
                     DKITFPLGAHARIRMNGNSGYSVAFEGYPTLDASALTLDTLLPPPDLPIFPESGVADI
                     SE"
     gene            complement(3617..4150)
                     /locus_tag="WJJ54_001082"
     CDS             complement(3617..4150)
                     /locus_tag="WJJ54_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HEZ7341960.1"
                     /translation="MGIYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQYEAL
                     QKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANT
                     APLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGDIKWNFTKFLVNRDGEVVERF
                     APSVTPEEIEADIRALL"
     gene            complement(4329..6584)
                     /locus_tag="WJJ54_001083"
     CDS             complement(4329..6584)
                     /locus_tag="WJJ54_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HEZ7341961.1"
                     /translation="MGQYKKLWYLLFAVLAVCFTILGYMGSEVYKKAPPYPEQVVSAS
                     GKVLMTKDDILAGQSAWQSTGGMEVGSILGHGAYQAPDWTADWLHRELSAWLDLTAQQ
                     TYGKKFDEVSPEEQAVLKTRLADEYRNQSRIKEDGSVVISDTRVKAIESILPYYHGVY
                     GDDPALQTTREHFAMKNNTLPSQEAREKLFDFFFWTSWSASTNRPDETFTYTNNWPHE
                     PLINNVPTTENYMWSFTSVVLLLMGIGLLMWGYSFLTKHEEVEVPSEDPISKIQLTPS
                     QKALGKYVFLTVALFVVQVLLGGLTAHYTVEGQGFYGIDEALGFEMSDWFPYALTRTW
                     HIQSAIFWIATGFLTAGLFLAPIVNGGKDPKFQRAGVNFLYIALFIVVGGSYAGNFFA
                     LTHILPPEFNFWFGHQGYEYLDLGRFWQLLLMVGLLLWLFLMLRCTVSAFKEKGVDKN
                     LLAIFVASMVGVGVFYAPGLFYGEKSPIAVMEYWRWWVVHLWVEGFFEVFATAAFAFV
                     FYNMGFVRRSTATASTLAAAAIFMLGGVPGTLHHLYFSGSTSASMAIGACFSALEVVP
                     LVLLGREAYEHWSYQHLSKWAKRLRWPLMCFVAVAFWNMIGAGVFGFLINPPISLFYI
                     QGLNTSAVHAHAALFGVYGFLALGFVLLVARYLKPNAQFDDKLMTWGFWLLNGGLVGM
                     IVISLLPVGAIQAYASITHGLWYARSEEFLQMEILDTLRWVRTAADLVFIGGAICVAI
                     QATKIVFGRDK"
     gene            6954..8099
                     /gene="nirK"
                     /locus_tag="WJJ54_001084"
     CDS             6954..8099
                     /gene="nirK"
                     /locus_tag="WJJ54_001084"
                     /EC_number="1.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase, copper-containing"
                     /protein_id="HEZ7341962.1"
                     /translation="MKRQALAAIIASMFALAACGGEPAAQTPAASAEAASSAAQTAAE
                     TPSGELPVIDAVTTHAPEVAPAIDRDYPAKVRVKMETVEKTMKMDDGVEYHYWTFDGD
                     VPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGGAAATFTAPGRTSTFSFK
                     ALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPKVDKEFYIVQGDFYTKGKKGA
                     QGLQPFDMDKAVAEQPEYVVFNGHVGAIAGDNALKAKAGETVRMYVGNGGPNLVSSFH
                     VIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIPGSYTLVDHSIFRAFNKG
                     ALGQLKVEGAENPEIMTQKLSDTAYAGSGAAPAASAPAASAPAKSDY"
     gene            8226..8981
                     /locus_tag="WJJ54_001085"
     CDS             8226..8981
                     /locus_tag="WJJ54_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HEZ7341963.1"
                     /translation="MKFARLLFLCAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIK
                     VKPFKLDKYPVTNAEFAEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKASE
                     LKQPVTNVSWFAANAYCAAQGKRLPTIDEWEFAGLASATQRNGSNEPGYNRTILDWYA
                     DGGRKGLHDVGKGRPNYWGVYDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASVGSS
                     DSSNYAAFLRYGIRTSLQSKYVLHNLGFRCASR"
BASE COUNT         2442 a         2602 c         2159 g         2087 t
ORIGIN      
        1 ccatatccaa cgccctgccc gccggtacgg tatcctgagc cgccgcaacc gcagaatgcg
       61 tggcactcat gccgtatttt ttgtgaaaat agtctgccgc cgcgcaatac agcgacaaac
      121 ggatttcggc atcgtccgtt ttcggtttga cagaaaacac ctgctgcggc gcaaacacgc
      181 aatcgccgct ttctgccgac caaacctctg ccgccccgtc cggtgcacgg acttcgacat
      241 cgccctgcaa cacattcagg cagacccatt ccccttcctc agacgaatag cccgacaaca
      301 aaatttccgg caggttttcc actttccata caggcatttg tccgaaacaa aacaactcgc
      361 cgctttgacc cactatccgc tccttcatat tcaaaaataa agttgcacat tatatgccta
      421 tttcaatccg ccgcaatctt tcagacggca cggcgcgcaa accgcttata atcacgccgg
      481 acaccacaca aaggcacaat atggacacac ccgtttacct ttacaccgac ggcgcgtgca
      541 aaggcaatcc cggcgcgggc ggctggggcg tattaatgcg ctacggcagc catgaaaaag
      601 aacttttcgg cggcgaagcg caaaccacca acaaccgcat ggagctgacc gccgtcatcg
      661 aaggactgaa atcgctcaaa cgccgctgca ccgtcatcat ctgcaccgac tcgcaatacg
      721 tcaaaaacgg catggaaaac tggatacacg gttggaagcg caacggctgg aaaaccgccg
      781 ccaaacagcc cgtcaaaaac gacgacttgt ggaaagaact cgacgctctg gtcggacggc
      841 accaagtcag ctggacttgg gtgaaaggac acgcgggaca cgccgaaaac gaacacgccg
      901 acgatttggc aaaccgtggc gcggcgcagt tttcctgact gccgcaccgg caagaaaatg
      961 ccgtctgaaa ccgctaatgg gctttagacg gcatttttac catacactcc ttatttcgca
     1021 attaacggta catctacctg cttgggtgaa atcgtaaaca tcttaccgtt actcaacgga
     1081 tcaacaatca gataaccaat caggccaccg aaaatcaggt ttccaccaat ataccaacca
     1141 ttcggattgg tttctaactt gtaaaccaac ggctgataac ccttcttctc aaaagaaacc
     1201 tgatattttt tcctgccgaa atatttgccg ttgcctttag gcaacgaaac atttgcgggc
     1261 gttacacctg attgaacaat cacacctgtt tcatcctgaa ttttaaatac cgcaccggat
     1321 ggttgacttt taatcggcac ggtctgactg gactctccca taatcgttgc acaacccgac
     1381 aaaaccaaaa tcggtgcaag ccatgttgcc aagaacttat tcatcaaaat catctccaac
     1441 tgactaaaaa ataaaataca ttaaattaca caataatgat gtaatttgga atattttact
     1501 tatttacaac actgtttaca agagaaaaaa caagataaat atccatagat gagtaaatct
     1561 acaatcggat acaaaatggt acaattgctt gcaacagaag cagaccggct aataggtgaa
     1621 aaaatccgac aacgacgaaa agagttgggc tattctgcag aaaagctggc ggaacacatc
     1681 aatctttctc aacagcagat ttcacgctac gaacgtggcg taggtaaaat taatatttcg
     1741 cacttagtcg atattgccgt ttttctggaa acgccgattg cttggttttt ccaagattgc
     1801 ctgcccaaac cactgacggt agcctgtact cctgagaaca cacccgaaca gcaatggcac
     1861 agccttaatc caaaccaaaa agctgccttt gccgcctttt tggatacttt aaggaataaa
     1921 gaaacatgaa caccaagcct tgccccatct gcacggcaca agatgaagat attttgctgc
     1981 aaacccccaa cctccgcgtc atcgccgtcc ataacgacag cggttcgcct gcattctgcc
     2041 gcgtcatttg gcgtaagcat attgccgaaa tgaccgacct ttcggcagcg gaacgcggcg
     2101 aattgatgga aatggtgtac aaagtcgaag ccgctatgcg ccaagtgttt caacctgcca
     2161 agattaacct cgccagcttg ggcaatgtcg tgccgcacct gcattggcat attatcgccc
     2221 gctttgaaaa cgatgcgtct ttccccgcgc cgatttgggc aaaccccgtc cggaaacacg
     2281 gtatgaccct gccgcaagat tggacggaac agcttaaaaa gctgctttaa gcccgccgat
     2341 gccgtctgaa accgtatgaa aggggaatta tgaccgaacc gacctcccgc cgccgtttcc
     2401 tgaaaacctg caccgccgcc gccggcgcgg gactgcttca ggcttgcggc acatccgcca
     2461 catccgttcc gccccttccc tcttcccatt ccgttgtgaa agctcgaacc gtgcctctcc
     2521 aaacgccacg ccgtcaaagt tcggacggca accttctgcg cgttgtcgct tcgtcaggct
     2581 ttgccgaaga caccaaccgc gtcaacacag ccttaacccg cctttacaat gccggtttta
     2641 ccgtaaccaa ccaacaggcg ggcagccgcc gcttccaacg gtttgctggt acggacgcac
     2701 aacgtgtcgc cgatttccaa gaggtcgctt ccggccgcgt cgccacgcct aaagtgctga
     2761 tgggcttgcg cggcggttac ggtgcggcgc ggattctgcc gcatatcgat tttgcttcgc
     2821 tcggcgcaag gatgcgcgaa cacggcacgc tgtttttcgg attcagcgac gtatgcgccg
     2881 tccagctggc attgttggca aaaggcaata tgatgagttt tgccggcccg atggcttata
     2941 gcgattttgg caaacccgcc cccggtgcgt ttacgatgga tgcctttatc aagggtgcaa
     3001 cccaaaaccg cctgaccgtt gatgttcctt atatccaacg cgccgatgtc gaaaccgaag
     3061 gcatattgtg gggcggcaac ttaagcgtcc tcgcctcgct cgccggcacg ccttatatgc
     3121 ccgacatcga cggcggcatt ttgttcctcg aagatgtcgg cgaacagccc taccgcatcg
     3181 aacgtatgct caatacgctg tatctttcgg gtattttgaa gaaacagcac gccatcgtgt
     3241 tcggcaattt ccgtatggaa aaaattcgag atgtctatga tccgtcttat gatttttccg
     3301 ccgttgccaa ccatgtttcg cgcacggcga aaatccccgt gctgacgggc ttcccgttcg
     3361 gacacattgc cgacaaaatc actttccctc taggcgcgca cgcccgaatc cgtatgaacg
     3421 gaaacagcgg ttattcggtc gcgtttgaag gctacccgac actcgatgcg tccgccctga
     3481 ctttggatac cctgctccca ccgccggatt tgcccatctt ccccgaaagc ggtgttgccg
     3541 atatttcgga ataaacccgc aaacggacaa atgccgtctg aagccttcag acggcatttc
     3601 ccaagacggc ggcagattac agcaatgccc gaatatcggc ttcgatttct tcgggcgtaa
     3661 cactaggcgc aaaacgctcg accacttcgc cgtcgcggtt gacgaggaat ttggtaaagt
     3721 tccatttgat gtcgccttcg tcgcgcttct ctcccaaagc tgcgagcttc aacacgaaat
     3781 ctttaaacag atgattgcct ttatcttgcg gtttgacgga tttcaggtag gcatacaagg
     3841 gcgcggtatt tgctccattg acttcgattt tgtcgaaaat cttaaacttc gtgccaaact
     3901 tcatcataca cacttgggca atttctccgc tgctttcggg agcctgttcg cggaactggt
     3961 tgcacggaaa atccaaaatc tccaagcctt ctgcggtata ttgtgcatac agcttctgca
     4021 aagcctcgta ttgcggggtc agaccgcaac gcgttgccgt gttgacaatc agcagaacct
     4081 tgccgcgata gcctgacaaa tcaaccgcat tgccttccgc atctttcatt tgaaaatcgt
     4141 aaatacccat ttttatcctt atctgatgta aaccgatgcc atctgaaacg tgcttcagac
     4201 ggcatgaaag cagcaattgt atagccgatc aaaataaaaa atccacatcc ttttccattc
     4261 ccgtcccaat ccgcaataaa aaactgcacc cgaaaacggg tgcagttgct catttcatac
     4321 cgcaaaactt atttgtcccg gccgaatacg attttagtag cttggatggc aacgcagatt
     4381 gcaccgccga taaagaccaa gtcagctgcc gtacgtaccc aacgcaaggt atcgaggatt
     4441 tccatttgca ggaactcttc gctgcgggca taccacagac cgtgcgtgat ggaggcgtat
     4501 gcctgaatcg cgccgacagg cagcaggctg ataacaatca taccgaccaa gccaccgttg
     4561 agcagccaga agccccaagt catcagtttg tcatcaaact gcgcgttcgg tttcaaataa
     4621 cgggcaacca acaatacgaa gcccaatgcc aagaaaccgt acacaccaaa caaggcggcg
     4681 tgcgcgtgaa cggcagaagt gttcaaacct tgaatataga acagggaaat cggcggattg
     4741 atcaggaagc cgaatacgcc ggcaccgatc atattccaaa aggcgactgc cacgaagcac
     4801 atcagcggcc aacgcaggcg tttcgcccat ttggacaggt gttggtaaga ccaatgctcg
     4861 tatgcttcac ggcccagcaa caccagcggc acgacttcca aagcggagaa gcaggcaccg
     4921 attgccatag aggcggaggt agagccggag aagtacaggt ggtgcagcgt acctggaacg
     4981 ccgcccaaca taaagatggc ggcagcggcc agagtagaag ctgtggcggt actgcggcgg
     5041 acaaagccca tattgtagaa gacaaaggca aaagcggcag tggcaaatac ttcaaagaag
     5101 ccttccaccc acaggtgaac cacccaccaa cgccagtatt ccattacagc aatcggggat
     5161 ttttcgccat agaacaggcc tggtgcgtag aatacgccca caccgaccat agaagcgaca
     5221 aagattgcca gcaggttttt gtccacgcct ttttctttaa aggcggaaac cgtgcaacgc
     5281 aacatcagga acagccataa cagcagaccg accatcaaaa ggagttgcca gaaacgtccc
     5341 aaatcgaggt attcgtaacc ttggtgtccg aaccagaagt taaattccgg gggaaggatg
     5401 tgcgtcaacg cgaagaagtt gcccgcgtaa gaaccgccga ccacgatgaa gagggcgata
     5461 tagaggaagt ttacgccggc acgttggaac ttgggatctt taccgccgtt gacaatcggc
     5521 gcgaggaaca aacctgccgt caaaaagccg gttgcaatcc agaagatggc ggattggatg
     5581 tgccaagtac gggtcagggc gtaggggaac cagtcggaca tttcaaagcc caacgcctcg
     5641 tcaatgccgt agaaaccctg gccttcgacg gtgtagtgcg cggtcagtcc gcccagcaat
     5701 acttgtacca caaacagggc gaccgtcagg aagacgtatt tgcccaatgc tttttgcgaa
     5761 ggggtcagtt ggattttgga aatcgggtct tcagacggca cttccacttc ctcgtgtttg
     5821 gtcaagaagg aataacccca catcagcaaa ccgatgccca tcagcagaag aacaacgctg
     5881 gtgaatgacc acatatagtt ttcagtggtc ggtacgttgt tgatcaaagg ctcgtgcggc
     5941 cagttgttgg tataagtgaa cgtctcgtca ggacggttgg tcgaagcaga ccaagaagtc
     6001 cagaagaaga agtcgaacag tttttcacgc gcttcttggc ttggcaatgt gttgtttttc
     6061 attgcaaagt gttcgcgggt ggtttgcagc gcgggatcat cgccgtaaac accgtggtaa
     6121 taaggcagga tgctttcgat ggctttcacg cgcgtatcgc tgatgacgac gctgccgtct
     6181 tctttaatac ggctttggtt gcggtattcg tcagccagtc gggttttcag aacggcttgt
     6241 tcttcagggg aaacttcatc gaattttttg ccgtaagtct gttgcgcggt caaatccaac
     6301 caagcggaca actcacgatg cagccagtcc gccgtccagt ccggagcctg atatgcgccg
     6361 tgacccagaa tcgaaccgac ttccataccg ccggtactct gccacgcaga ctgacctgcc
     6421 aaaatatcgt ctttcgtcat cagcactttg cctgatgcgg aaacgacctg ttcggggtaa
     6481 ggcggggctt tcttataaac ctcgctgccc atatagccaa gaatggtaaa gcataccgcc
     6541 agaacggcaa acagcaagta ccacagcttc ttgtactgtc ccattttgag agctcctttt
     6601 aatatagtgg attaaaattc acaaaatatg aatgttaaag attgtagcac ggtttaccgc
     6661 gcaaataaac atttgttcaa agaaactcac atataaaaca aatacatata tgataataac
     6721 tatcattatt ctttagtcgg caactaccct gcctttgcct gatttgccga agcccttaag
     6781 caaatcagcc tatttattgt aatttttagt agctataaag tattagaagt atcattttaa
     6841 gttcatattt tatgaattat ttgacttaaa tcaaaatgtc ggtgatgggg caaacgcata
     6901 atcacaccag ttcttaacca atctccctac ttttcttaca aaaggaaaac attatgaaac
     6961 gccaagcctt agccgcaatt atcgcttcta tgtttgcttt agccgcctgc ggtggcgaac
     7021 ctgccgcgca aacccctgcc gcttccgccg aagccgcaag ctccgccgca caaaccgccg
     7081 ccgaaacacc gtccggcgag ttgcccgtta tcgatgcggt taccacccac gctcccgaag
     7141 tagctcccgc aatcgaccgc gactatcctg ccaaagtccg cgtaaaaatg gaaaccgtcg
     7201 aaaaaaccat gaaaatggac gacggcgtgg aataccatta ctggacattt gacggcgatg
     7261 ttccgggccg catgatccgc gtacgcgaag gcgatacggt tgaagtggaa ttttccaaca
     7321 atccttcttc taccgtaccg cacaacgtcg acttccacgc ggctaccggc cagggcggcg
     7381 gcgcggccgc aacctttacc gctccgggcc gtacttccac attcagcttc aaagccctgc
     7441 aaccgggtct gtacatctac cactgcgccg tcgcaccggt cggtatgcac atcgccaacg
     7501 gtatgtacgg tctgattttg gtcgagccta aagaaggtct gccgaaagtg gataaagagt
     7561 tctacatcgt ccaaggcgac ttctacacca aaggcaaaaa aggcgcgcaa ggcctgcaac
     7621 cgttcgatat ggacaaagcc gttgccgaac agcctgaata cgtcgtattc aacggtcatg
     7681 taggtgctat cgccggcgat aacgcgctga aagccaaagc aggcgaaacc gtgcgtatgt
     7741 acgtcggtaa cggcggtccg aacctggtgt cttccttcca cgtcatcggc gaaatcttcg
     7801 acaaagttta tgttgaaggc ggcaaactga tcaacgaaaa cgtacaaagc accatcgttc
     7861 ctgccggcgg ctctgccatc gtcgaattca aagtcgacat cccgggcagc tacactttgg
     7921 tcgaccactc catcttccgc gcattcaaca aaggcgcgtt gggccaattg aaagtagagg
     7981 gtgcggaaaa ccctgaaatt atgactcaaa aattgagtga taccgcttac gccggcagcg
     8041 gtgcagctcc tgctgcttcc gctcccgcag cttctgctcc tgcaaaaagc gattactaaa
     8101 ttgaacaccc atttttaggc aaacgaacca ctgccgccgt acttcattac gcacggcagt
     8161 ggttttttaa caaccaatct ttcctttcgg aagattgatt ttaactgcct gtcaggaggc
     8221 atgatatgaa gtttgcccgg ttactctttc tctgtgcggc actcgccggc actcaagcgg
     8281 cagctgccga aatggttcaa atcgaaggcg gcagctaccg cccgctttat ctgaaaaaag
     8341 ataccggcct gattaaagtc aaaccattca aactggataa atatcccgtt accaatgccg
     8401 agtttgccga atttgtcaac agccaccccc aatggcaaaa aggcaggatc ggttccaaac
     8461 aggcagaacc cgcttacctg aagcattgga tgaaaaacgg cagccgcagc tatgcaccaa
     8521 aagcaagcga gctgaaacag cctgttacca atgtttcctg gtttgccgcc aacgcctatt
     8581 gcgccgcaca aggcaaacgc ctgccgacca ttgacgaatg ggaatttgcc ggacttgctt
     8641 ccgccacgca gagaaacggc tcaaacgaac caggctacaa ccgcactatt ctcgattggt
     8701 atgccgacgg cggacggaaa ggcctgcacg atgtcggcaa aggccgcccg aactactggg
     8761 gcgtttacga tatgcacggt ctgatttggg aatggacgga agatttcaac agcagcctgc
     8821 tttcttccgg caatgccaac gcccaaatgt tttgcagcgg cgcatctgtc gggtcgagcg
     8881 actcgtccaa ctatgccgcc ttcctccgct acggcatccg taccagcctg caatccaaat
     8941 acgtcctgca caacttaggc ttccgctgcg caagccgata accccttcaa ttatagtgaa
     9001 ttaacaaaaa ccagtacggc gttgcctcgc cttgccgtac tggtttttgt taatccgcta
     9061 tattccgcca tctcttaaga tttacagcga tacacgggtg atttaaggaa tgcccgaacc
     9121 gtcattcccg caacttttcg tcattcccgc aacttttcgt cattcccgca acttttcgtc
     9181 attcccacga acctacatcc cgtcattccc acgaaagtgg gaatctagaa tctcggactt
     9241 tcagataatc tttgaatatt gctgttgttc taaggtctag attcccgcct
//
LOCUS       DAWKJW010000064         9070 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.064, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000064 DAWKJW010000000
VERSION     DAWKJW010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9070)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9070)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9070
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.064"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(4..1260)
                     /locus_tag="WJJ54_001086"
     CDS             complement(4..1260)
                     /locus_tag="WJJ54_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEZ7341964.1"
                     /translation="MNAAQLDHTAKVLAEMLTFKQPSDAVLSAYFREHKKLGRQDRHE
                     IAETAFAALRHYQKISTALRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEEIEFLG
                     NLKARKTEFSDGLNTAAELPQWLVEQLQQHWREEEILAFGRSINQAAPLDIRVNTLKG
                     KRDKVLPLLQAESADAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALL
                     VGAKRGEIIVDFCAGAGGKTLAVGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI
                     HPERISSEHDSRIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQH
                     SILDAASKLVKPQGRLVYATCSILPEENELQVERFLSEHPEFEPVNCAELLQNLKIDL
                     DTGKYLRLDSAKHQTDGFFAAVLQRK"
     gene            complement(1608..1949)
                     /locus_tag="WJJ54_001087"
     CDS             complement(1608..1949)
                     /locus_tag="WJJ54_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341965.1"
                     /translation="MKNNVKNWTTKEVKQSLDKFNNILIKNTFLLQYLKKEFSASSAY
                     CLSMLPEEVDIYEILVNGNIIIDLEFNKHTNETVVINVTDVDEYLKTLTNESGRVFFT
                     LAKEIGKQKNI"
     gene            complement(2153..3010)
                     /locus_tag="WJJ54_001088"
     CDS             complement(2153..3010)
                     /locus_tag="WJJ54_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1853 family protein"
                     /protein_id="HEZ7341966.1"
                     /translation="MNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELGVRELLGE
                     RGFRYLLALDADPAPLTEHLTRRAPFGHRLGIYAEELLAFWFANAPHAELLAHNLTVS
                     GSDGNTQGAADFVVRLNGKPYHIELTCKYYGGGTGRLEDMRGLDPKDTLLGKAAKLTA
                     QLGLPHTSDGIRTLRQHGLPLDVKPVSIVRGIGFFPQGFNAFEPPLNPYGWRGIYIQY
                     WAEYGFERQEARYHLLDRMAYLAPARVAETEALNETEIRRIDQGLIAVLELRPDGFWH
                     EIERIMKAV"
     gene            complement(3071..3886)
                     /locus_tag="WJJ54_001089"
     CDS             complement(3071..3886)
                     /locus_tag="WJJ54_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEZ7341967.1"
                     /translation="MTTLKPALPAYLDNIRIILTRTSHPANIGSAARAMKTMGLHKLT
                     IVAPNLMATPMTENPPVFDPEHPQSFKLPEESFILASGAADVLENATIAASLDEALAD
                     TTIACALTSRRREITAPLQTPRDLVSELLQTANRGEKVALVFGNETFGLSIEEVQACN
                     RLMTINGNPDYFSLNLAQAVQVVCYEIFSQTGSPMTHLQQEDHAATHEQIKGMVAHME
                     SVMNDIGFFNRRNGERLMRRMQSLFGRANTQTEDIDILRGFFNTVSHRIHKKD"
     gene            3950..4120
                     /locus_tag="WJJ54_001090"
     CDS             3950..4120
                     /locus_tag="WJJ54_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341968.1"
                     /translation="MPSEMFFNNVGNLTLRLKQTRVGRYFTRFGRIYPNQINSDFAAP
                     KDCTFELAVCHP"
     gene            4130..4915
                     /locus_tag="WJJ54_001091"
     CDS             4130..4915
                     /locus_tag="WJJ54_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HEZ7341969.1"
                     /translation="MNPFLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVD
                     RNSEIILVEALKEAYPHHKITCEESGSHGKAAAEYEWIIDPLDGTTNFLHGHPQYAIS
                     MALLHKGVLQEALVYAPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVV
                     DQSMMDKYLAILKDFLSKTAGGRREGAASLDLCAVATGRFDGFFEFNLKPWDIAAGAL
                     IVQEAGGIVTDMTGEDAWLESGDIVAANPKVLAQMLKIISAHV"
     gene            5184..7303
                     /locus_tag="WJJ54_001092"
                     /pseudo
     CDS             5184..7303
                     /locus_tag="WJJ54_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219143.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
     gene            7427..8977
                     /locus_tag="WJJ54_001093"
     CDS             7427..8977
                     /locus_tag="WJJ54_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HEZ7341970.1"
                     /translation="MKKPLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQETGFL
                     TVESHQYERGWFTSMETTVIRLKPELLNNARKYLPDNLKTVLEQPVTLVNHITHGPFA
                     GGFGTQAHIETEFKYAPETEKVLERFFGKQAPVSLANTVYFNGSGKMEVSVPAFDYEE
                     LSGIRLHWEGLTGKTVYQKGFKSYRNSYDAPLFKIKLADKGDAAFEKAHFDSETSDGI
                     NPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEV
                     GKLAFSTKTGESGAFIDSEGQFRFGTLVYGDEKYGPLDIHIAAEHLDASALTVLKRKF
                     AQISAKKMTEEQIRNDLIAAVKGEASGLFTNNPVLDIKTFRFTLPSGKIDVGGKIMFK
                     DLKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEGRASLDD
                     INETLRLMVDSTVQSMAREKYLTLNGDQIDTAISLKNNQLKLNGKTLQNEPEPDFDEG
                     GMVSEPQQ"
BASE COUNT         2280 a         2163 c         2381 g         2246 t
ORIGIN      
        1 ggtttatttg cgttgcaata cggcggcgaa gaagccgtcg gtttggtgct ttgccgaatc
       61 gaggcgcagg tattttccgg tatccaaatc aatcttcagg ttttgcagca gttcggcgca
      121 gttgacgggt tcaaattcgg gatgttcgga caggaaacgt tcgacttgca gctcgttttc
      181 ttcgggcagg atgctgcaag tggcgtaaac caagcggcct tgcggtttta ccagtttgga
      241 ggcagcatcg aggatgctgt gttgctgttc caaaaggttg gccacggtct cggcagattg
      301 gcggtatttg aggtcgggat tgcggcgtaa agtacccaaa ccggagcagg gcgcgtccac
      361 caacacacgg tcggctttgc ctgccagtcg ggcgatacgg ctgtcgtgtt cgctgctgat
      421 gcgttcgggg tggatattgg tcagtccggc gcgggtcata cgcggtttga ggttggcaag
      481 gcgtttttcg gcgatgtcga aggcgtagat tctgccttta ttggccattt gcgcaccgac
      541 agccaaggtt ttgccgccgg caccggcaca gaaatcgaca atgatttcgc cgcgttttgc
      601 gcccaccaat aaagcaagca gctggctgcc ttcgtcttga acttccagcg taccgtccaa
      661 aaacagctcg tgtttgttaa gcgcgatttt gtttttcagg cggatgcccc aaggcgaata
      721 aggcgttgcc tctgcatcgg cactttcggc ttgcaacaat ggcagcactt tatcgcgttt
      781 gcctttcaag gtattgacgc gtatatcgag cggcgcagct tggttgatgc tgcggccgaa
      841 ggcgaggatt tcttcttcgc gccaatgctg ctgcagctgt tctaccagcc attgcggcaa
      901 ttctgcggcg gtattcaggc cgtctgaaaa ctcggtttta cgggctttca aattgccgag
      961 aaactctatt tcttcttcat caagcaggtc tttgatttgg ctgatgttgg tgcttctgcc
     1021 gagaaccagt gcggcgagtg cggctttgcg cggctgcgcg tgcggacggc gcagggcggt
     1081 actgattttt tgatagtggc gcagcgcggc aaaggcggtt tcggcgattt cgtggcggtc
     1141 ttggcggccg agctttttgt gttcgcggaa ataggcggag aggacggcat cggaaggctg
     1201 tttgaaagtc agcatttcag ccaaaacttt ggcggtatgg tcgagttgtg cggcgttcat
     1261 aatgtaatgg gttctcttac tgtgggttat tcataatcaa tctaacgtcc ttaaaataac
     1321 aatagcatct ttatcattac ttagtattct atccgcaata agaaagatgt gttaaaagtg
     1381 cgcaatcggg atttgtctaa atttctccgt taactacaaa ggcagcctga aaaaagttct
     1441 attttcaggt cgcttgaaca gcatccgata taatcacatc agcgatttca ttttgtaatc
     1501 actccccaaa acatgaggaa aaaaacaaaa tttattttct tcgttcagca tatctatcct
     1561 aaatatgcca tcactccatt gagtttttaa tttgtatttc gctcttgtta aatgtttttc
     1621 tgtttgccga tttcttttgc taatgtaaaa aatactctac cactctcatt ggttaaagtt
     1681 ttcaagtatt catcaacatc agtaacatta ataacaactg tttcatttgt atgtttatta
     1741 aattctaaat caataataat attcccatta accaatattt catatatatc tacttcttca
     1801 ggcagcatag acaaacaata agcacttgaa gctgaaaact cttttttcag atactgaaga
     1861 agaaaagtat ttttaattaa aatattatta aatttatcta atgattgctt gacttcttta
     1921 gttgtccaat ttttaacatt attcttcatt gtattctacc tggggtcgta gttattaaat
     1981 taccatactt atttgtttgg atcgtcataa tattagttgg catgttgttg ttatatttat
     2041 catatccaat atccttatta actcggatga ctctttcata aattgtatgg gaaatgagat
     2101 ttccatcact aagcctctca atagatatac gcgttaatgt tgggaaaggg tttcagacgg
     2161 ccttcataat gcgttcgatt tcgtgccaaa agccgtcggg gcgcaattcc aaaacagcaa
     2221 tcaagccttg gtcgatacgg cggatttcgg tttcgttcaa tgcttcggtt tcggcaacac
     2281 gcgcaggcgc gagataggcc atacggtcga gcaggtggta gcgtgcttct tggcgttcaa
     2341 acccatattc cgcccaatat tgaatataga taccgcgcca gccgtatgga ttaagcggcg
     2401 gctcaaaggc gttgaaacct tgcggaaaaa atccgatgcc gcgcacgatg gaaacgggtt
     2461 ttacgtcaag cggcagaccg tgttgccgca aggttcggat gccgtctgaa gtgtgcggca
     2521 gaccgagttg ggcggtcagt ttggcggctt ttcccaacag cgtgtctttg gggtcgagtc
     2581 cgcgcatgtc ttcgagcctg cccgtgccgc cgccgtaata tttgcaggtc agctcgatat
     2641 ggtagggttt gccgttaagc cttaccacaa aatccgccgc gccttgcgta ttgccgtccg
     2701 aaccggaaac cgtgaggttg tgcgcgagca gttcggcgtg tggcgcgttg gcaaaccaaa
     2761 atgccagcag ttcttcggcg taaatgccga ggcggtgtcc gaacggggcg cgtcgggtga
     2821 ggtgttccgt cagcggcgcg ggatcggcat ccaatgccaa aagatagcgg aaaccgcgtt
     2881 cccccaatag ttcgcgcacg cccaattcgc aaccgctttg ccacaaaggc ggcgcagtca
     2941 gcagcgaggc gaggtcgcgg acgggttggc tggtgagctt ccaccataat gcgtctaggg
     3001 cgtaattcat gcttatccga atatcagtca tgccgtctga aaagctggaa atgttttcag
     3061 acggccttaa tcagtctttt ttatggatac gatggctgac ggtattgaaa aaaccgcgca
     3121 ggatatcgat gtcttcggtt tgcgtgttgg cgcgtccgaa caggctctgc atacggcgca
     3181 tcagacgctc gccgttgcgg cggttgaaaa agccgatgtc gttcatcacg ctttccatgt
     3241 gggcgaccat gcctttgatt tgctcgtggg tcgcagcgtg gtcttcttgt tgaagatggg
     3301 tcatgggcga accggtttgg ctgaagattt cgtagcacac gacctgcacg gcttgggcga
     3361 ggttgagcga gaaatagtcg ggattgccgt tgatggtcat cagtcggttg caggcttgga
     3421 cttcttcgat gctcaagccg aaagtctcgt tgccgaaaac cagtgccact ttctcgcctc
     3481 ggtttgcggt ctgcagtaat tcggatacca aatcgcgcgg ggtttgcagc ggcgcagtaa
     3541 tttcgcggcg gcggctggtc agggcgcagg cgatggtggt gtcggcaagg gcttcgtcca
     3601 aagaagcggc aatggtggca ttttccaaaa cgtctgccgc gccggaagcg aggatgaagc
     3661 tttcttccgg taatttaaac gattgaggat gctccgggtc aaacacgggc gggttttccg
     3721 tcatcggcgt tgccatcaga tttggggcga cgatggtcag tttgtgcaga cccattgttt
     3781 tcatcgcgcg cgcggcagag ccgatgttgg cgggatggct ggtgcgcgtg aggatgatgc
     3841 ggatgttgtc cagataagcg ggcagggcgg gtttgagagt agtcatgttc ggttttcggt
     3901 cggaatggaa tagggtataa tgcgccgtct ttttcgttcg gacggtaaaa tgccgtctga
     3961 aatgttcttt aacaacgtcg gaaatttaac gttgcgcctg aagcagacac gcgtcgggcg
     4021 gtattttacc cgatttggca ggatttaccc caaccaaata aactccgatt ttgccgctcc
     4081 gaaggactgt acgttcgaac tggcggtatg ccacccttaa ggaaatctga tgaatccgtt
     4141 tttgaataca gcctttaaag ccgcccgccg tgccggtcag atgatgatac gcgccgcagg
     4201 taacctcgat gccgtcaaaa ccgacagcaa agccttcaac gattttgttt ccgatgttga
     4261 ccgcaattcc gaaatcatcc tggttgaggc tttgaaagaa gcctatccgc accacaaaat
     4321 cacttgtgaa gaaagcggct cccacggcaa agccgcagcc gagtacgaat ggattatcga
     4381 tccgctcgac ggcacgacca atttccttca cggtcatccc caatacgcca tctctatggc
     4441 gctgctgcac aaaggcgtgt tgcaagaagc tttggtttac gcccccgaac gcaacgacgt
     4501 atatatggct tcgcgcggca aaggcgcgtt gctcaacgac cgccgcatcc gcgtttccaa
     4561 ccgcatcgaa ttgaaccgct gcctgatcgg taccggcttc cctgttgtcg atcaaagcat
     4621 gatggacaag tatctggcga ttttgaaaga tttcttgtca aaaaccgccg gcggccgtcg
     4681 tgaaggcgcg gcttctttgg atttgtgtgc tgtagcaaca ggtcgttttg acggcttttt
     4741 cgagtttaac ctcaaaccgt gggacattgc cgcaggtgca ttgattgttc aggaagcggg
     4801 cggtatcgta accgatatga cgggtgagga cgcttggttg gaaagcggcg atattgtcgc
     4861 cgccaatccc aaagtattgg cgcagatgct gaaaatcatt tccgcacacg tttaaatttc
     4921 agccctttcc cgaaaatatg ggaaaacggg cgggtatgcc gtctgaagta tcgcgccgat
     4981 atttcagacg gcatttttat tggcaacgcg gcaggacggc ggaaacggtc aaatgcccca
     5041 aactgccgag gatggaaacc catatctgat taaacggaga accctgtgcg atttgtttat
     5101 agtggattaa caaaaaccag tacggtgttg cctcgcctta gctcaaagag aacgattctc
     5161 taaggtgctg aagcaccaag tgaatgggca aagccaacgc ctttaccgca ccgattaccg
     5221 tcgtcaatta cgacgaacaa gccctcaata acaccgaagc gcgtactttg gtggatgccg
     5281 tagcgaaaaa agacgcttcc gtttggcagt tcggcggcga aagcaacacg ctgaccggac
     5341 tgtatttcag aggttatcag cttgatgcgc gccaattcag cgtcaacggt ttggcaggta
     5401 tgtacggcac gcaaggcacg gcaagcgtgc aagttggatc ggcacaactg attaaaggcg
     5461 catccactgc cgtaaacggc atggaccctg aaggtgcggt atccggttcc gtcaatatcg
     5521 aaaccaaaaa agccgccgat gaaggcaacc gcaaaatcgg tttgggctgg ttcagtaaca
     5581 accgcgccca aggtacgttc gacttgggcc aacgtttcgg cgaaaacaaa gcattcggcg
     5641 tgcgcgccaa cggcaaactg cgccacggcg acaccccgcg ccacggttac agcgaagaca
     5701 acaaagaatt tgcggtaaat gccgactatc gcggcgaaac actgcgcgta gcgttcgatt
     5761 ccatctacgc aaaacgcaaa accaacggcg gtcgcgcgcg tatgcaggac attcaaaacg
     5821 ccggcggacg cttgtttggc gcgcccgatg gtaaaaccaa cctgctgcct tcttggaact
     5881 ggcaaaatac cgccggccaa accaatatgc ttacgtttga atgggatgcg tttgataatg
     5941 cacagattac aggcggtatc ggctacaaca aggcacgcta ttacggcacg ctgatttccc
     6001 cgaccgtatg tttgaatgct accagcactt gtaccgatat gcaaaacaca aacgccagcg
     6061 gcaaagtaac ggcacgcaac tatgactaca ataccggtac tgcgcgcctg accgaccaat
     6121 atttccgcac attgagtatg aacctgaccg cacgcggcga atttgaaacc ggcccggtaa
     6181 cacataactg gagtatggct ttcgaccgcg ttatccgcca gcggaaaacc ataaacggca
     6241 gcgggaacgg caacagcaag atagaagtga aggcaaacga aaatattgcg aatcaattgg
     6301 catcgtttac agccgactat cccaattctt gggagaactc tgccaacttg gatgccaata
     6361 tcaaagtcaa cagcctggct ttgtccgaca ccttgggctt cgtggataac aaataccgcc
     6421 tgactttggg cgaacgtttc caaacagtcg aatataccga caaaaaatca cagagcggcg
     6481 atgccaaacg tttcagcccg atgctgatgg cggcgtgggt gccgcaacct gatttggttg
     6541 tgtacggcaa ctatatggaa gacttggagc ctgccgacat caaaaccgat gattccggcg
     6601 aaacgacaat ggcgaaaccg cgtgtcagcc gccagtttga agtgggcgtg cgtaaaaact
     6661 ggggcaattt cgtaaccacg ttaaacgcgt tccaaatcaa acgcccggct actggcgcgg
     6721 tcatacaact accaagacaa caaaaggggt aacaacaacg ctgacctatg gcaacaattc
     6781 cgatttcgcc cgctataagg cgcaaggcgg cgtagccggc gacgagcaag gtatggaacg
     6841 caatcgcggt atcgagttca atgcctatgc taacctgtta aacaaaaccc tgcgtccgac
     6901 tttgggcctg atgtatctgc aatcgaccgt gaaagagtat ccaaattcac gcgatatgct
     6961 ggttaacggc gtacaagtcg ccaatccgcg cgtaattgcc aaggcaggtt tggaatggga
     7021 tacaccgttt gccaaaggct tgactttaaa cagcaatgtt tcgtatttcg gcaagtctta
     7081 ccaagacacg caaaaacaat acgccttccc atcctatacc ttggttgatg taggcgcgcg
     7141 ctacaaaacc aagctcggca aaaatacgtt gaccgtcagc agctcggtgg aaaatctgtt
     7201 caacaaaaac tactggcagg tacagcgcgg ccaatacgac cgcagcttcg ccgtcgtcgg
     7261 tctgccgcgt acttactggc tgaaggcgga attggatttc tgatttctcc gcatctggaa
     7321 aatgccgtcc gaacaggttt cagacggcat ttcttttaaa gagatatggc gggatacgct
     7381 taaataatgc tattctagcg tctttgaaac ctgcttgttt gaagtgatga aaaaaccttt
     7441 gatttcggtt gcggcagcat tgctcggcgt tgctttgggc acgccttatt atttgggtgt
     7501 caaagccgaa gaaagcttga cgcagcagca aaaaatattg caggaaacgg gcttcttgac
     7561 cgtcgaatcg caccaatatg agcgcggctg gtttacctct atggaaacga cggtcatccg
     7621 tctgaaaccc gagttgctga ataatgcccg aaaatacctg ccggataacc tgaaaacagt
     7681 gttggaacag ccggttacgc tggttaacca tatcacgcac ggcccttttg ccggcggatt
     7741 tggcacgcag gcgcacattg aaaccgagtt caaatacgcg cctgaaacgg aaaaagttct
     7801 ggaacgcttt tttggaaaac aagctccggt ttcccttgcc aataccgttt attttaacgg
     7861 cagcggtaaa atggaagtca gtgttcccgc cttcgattat gaagagctgt cgggcatcag
     7921 gctgcactgg gaaggattga cgggaaaaac ggtttatcaa aaaggtttca aaagctaccg
     7981 caacagctat gatgcgccct tgttcaaaat caagctggca gacaaaggcg atgccgcgtt
     8041 tgaaaaagcg catttcgatt cggaaacttc agacggcatc aatccgcttg ctttgggcag
     8101 cagcaatctg accttggaaa aattctccct agaatggaaa gagggtgtcg attacaacgt
     8161 caagttaaac gaactggtca atcttgttac cgatttgcag attggcgcgt ttatcaatcc
     8221 caacggcagc atcgcacctt ccaaaatcga agtcggcaaa ctggcttttt caaccaagac
     8281 cggggaatca ggcgcgttta tcgacagtga agggcagttc cgttttggca cactggttta
     8341 cggcgatgaa aaatacggcc cgctggatat tcatatcgct gccgaacacc tcgatgcttc
     8401 tgccttaacc gtattgaaac gcaagtttgc acaaatttct gccaaaaaaa tgactgagga
     8461 acaaatccgc aatgatttga ttgccgccgt caaaggcgag gcttctggac tgttcaccaa
     8521 caatcccgta ttggacatta aaacttttcg tttcacgctg ccgtcaggaa aaatcgatgt
     8581 gggcggaaaa atcatgttta aagatttgaa gaaggaagat ttgaaccaat tgggtttgat
     8641 gctgaagaaa accgaggcag acatcagaat gagtattcct caaaaaatgt tggaagactt
     8701 ggcggtcagt caggcaggca atattttcag cgtcaatgcc gaagatgagg cggaaggcag
     8761 ggcaagtctt gacgacatca acgagacctt gcgcctgatg gtggacagta cggttcagag
     8821 tatggcaagg gaaaaatatc tgactttgaa cggcgaccag attgatactg ccatttctct
     8881 gaaaaacaat cagttgaaat tgaacggtaa aacgttgcaa aacgaaccgg agccggattt
     8941 tgatgaaggc ggtatggttt cagagccgca gcagtaatgg gtcaaatgcc gtctgaaatg
     9001 ttcaggcggc attttgttgt attggaaact gccgttttca accattcctt tagataagcc
     9061 gtgtcggatt
//
LOCUS       DAWKJW010000065         9069 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.065, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000065 DAWKJW010000000
VERSION     DAWKJW010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9069)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9069)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9069
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.065"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(129..464)
                     /locus_tag="WJJ54_001094"
     CDS             complement(129..464)
                     /locus_tag="WJJ54_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEZ7341971.1"
                     /translation="MFKDWKEHTALVKKSFGELGKAHPKMLQAYGALEQAAAAEALDA
                     KTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALR
                     ALEAVETQK"
     gene            593..1498
                     /locus_tag="WJJ54_001095"
     CDS             593..1498
                     /locus_tag="WJJ54_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ7341972.1"
                     /translation="MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVT
                     SGNGYLCIDGETSPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQC
                     GNGQDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESKKPLTGTVS
                     MVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVDKM
                     VAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSE
                     THFGKAFKRQYHVSPGQYRKEGGQK"
     gene            complement(1560..2048)
                     /locus_tag="WJJ54_001096"
     CDS             complement(1560..2048)
                     /locus_tag="WJJ54_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEZ7341973.1"
                     /translation="MKKYLIPLSIVAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKG
                     FRLASSHWTDVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYE
                     IYLRSAIDSQRGAINTEQSKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQP
                     LK"
     gene            2195..3094
                     /locus_tag="WJJ54_001097"
     CDS             2195..3094
                     /locus_tag="WJJ54_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ7341974.1"
                     /translation="MDTAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVF
                     WRMLFSTVALGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTL
                     SYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGG
                     AMSGWAYLKVRELSLAGEPGWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCI
                     GVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIIL
                     SGILSSIRPTAFKQRLQSLFRQR"
     gene            complement(3135..4265)
                     /locus_tag="WJJ54_001098"
     CDS             complement(3135..4265)
                     /locus_tag="WJJ54_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ7341975.1"
                     /translation="MAKHLPLAVLTALLLAACGGSDKPPAEKPAPAENRNVLKIYNWS
                     EYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAG
                     AYQKIDKSLIPNYKHLNPEMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTD
                     KLPDNQWDLVFDPEYTSKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATA
                     LLKKNRPNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPK
                     EGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARELMEDE
                     FKNDNTIFPTEEDLKNSFIMVPIQPAALKFMVRQWQDVKAGK"
     gene            4470..7094
                     /gene="alaS"
                     /locus_tag="WJJ54_001099"
     CDS             4470..7094
                     /gene="alaS"
                     /locus_tag="WJJ54_001099"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEZ7341976.1"
                     /translation="MKTSELRQKFLKFFETKGHTVVRSSSLVPHDDPTLLFTNAGMNQ
                     FKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFK
                     RDAIHFAWEFLTSPEWLNIPKDKLLATVYAEDDEAYNIWLNEIGMPSERIVRIGDNKG
                     AKYASDNFWQMGDTGPCGPCSEIFYDHGEEIWGGIPGSPEEDGDRWIEIWNCVFMQFN
                     RDEQGNMNPLPKPSVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGAAFSME
                     EPSLKVIADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRAVRHGYKLGQSKPFFHKLV
                     ADLVKEMGGAYPELKEKQAQIEEALKNEESRFAQTLETGMALLENALAKGGKTLDGEI
                     IFKLYDTYGFPYDLTADICRERNIELDEAGFEREMEAQRARARAAQSFKANAQLPYDG
                     QDTEFKGYSERQTESKVLSLYKDGEQVNELNEGDSGAVVIDFTPFYAESGGQVGDVGY
                     IFSGENRFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSVTAKVDDEIRNANMRNHSATH
                     LMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTAEEIAEVERRVNEAILANVAV
                     NAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQMGGFSTELCGGTHVSRTGDIGLFKIIS
                     EGGIAAGVRRIEAITGLNALKWAQEQERLVKDIIAETKAQTEKDVLAKIQAGAAHAKA
                     LEKELARAKAELAVHAGAKLLDDAKDLGAAKLVAAQIEADAAALREIVTDLTGKSDNA
                     VILLAAVNDGKVSLCAGVSKPLTGKVKAGDLVKFAAEQVGGKGGGRPDLAQAGGTDAG
                     KLPEMLVSVESWLCQKLS"
     gene            7156..7887
                     /locus_tag="WJJ54_001100"
     CDS             7156..7887
                     /locus_tag="WJJ54_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341977.1"
                     /translation="MNTKTELQKLLEEDISTLTETLICADALPPRYVRSIATPIVRRW
                     LIDKQLNILAKEIGLTIELPILDTSLVFEKLSTLENKVNFYMAGGVYLGGEFISSIYH
                     SSQEFSGEPIIYAEPNIILCPAEKFLTLKRVFHNGNIFNMNQIITFLSNKQGGVHFDK
                     NYDKYKTWQVAIEKAANFLKLGNPYNEDKLSLSEEHDTILVVLPLEKGYEWNCLEIEV
                     LSAAQSLANIYCNKVRLIDGHVWKE"
     gene            8470..>9069
                     /locus_tag="WJJ54_001101"
     CDS             8470..>9069
                     /locus_tag="WJJ54_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ7341978.1"
                     /translation="MQEIGRTKPSALPEYYAVSDFAHFHLYRRVPEEGVENQWQFPLE
                     ALPEYITRGVFDFMFGIEAKVRQIQEEADIQAAAAIGRLHDALKEEGIYEEHELRLFI
                     TRLLFLFFADDSAVFQRNYLFQDFLESCKETDTLGDKLNQLFEFLNTPDQKRSKTQSE
                     KFKGFEYVNGGLFKERLRTFDFTAKQHRALIDCGNFDWRN"
BASE COUNT         2316 a         2391 c         2181 g         2181 t
ORIGIN      
        1 cttacccctt gtttctcaaa tgccgtctga aaaaaacggc tgtatatgtt gtctgcaaaa
       61 tatcgggaag cataacaggc aaaatgccgt ctgaaatatt ttcagacggc atttcaatcc
      121 gattcggatt atttttgcgt ttcaaccgct tccaatgcac gcagggcgta agtgtaagcg
      181 gcaccggcat tcagggcgat ggcggttgcc aatgcgccgg cgatttcgct gtcggtcgca
      241 ccggctttgg cggcggcggc ggcgtgaaca ctgatgcagc tctcacaacg tgtggtaatg
      301 gcaacggcga tggcaatcag ttcgcgcgtt ttggcatcaa gtgcttcggc ggcggcggcc
      361 tgttccaatg cgccgtaggc ctgcagcatt ttaggatgcg ccttacccag ctcgccgaac
      421 gattttttaa ccaatgcggt atgttctttc caatctttaa acattttctt ttcctttctc
      481 ttgcgtttaa ccctgatacg cgcttgcgta tctgttttcg atgtgcgtat tattgcaatt
      541 attcagttgt gtttctcgtt taatcatctc attttatggt tcaaaaagat ttatggacat
      601 tctggacaaa ctggtcgatt tcgcccaatt gacgggcagt gtggatgtgc agtgcctttt
      661 gggcggacaa tggtcggtac ggcatgaaac cttgcaacgc gaaggactgg tacacattgt
      721 tacatcgggc aacggctatc tctgcatcga cggcgaaact tccccgcgtc cggtcagtac
      781 aggggatatt gtatttttcc cgcgcggctt gggtcatgtg ttgagccacg acggaaaatg
      841 cggagaaagt ttacaaccgg atatgcggca gcacggtgcg tttacggtca aacagtgcgg
      901 aaacggacag gatatgagcc tgttttgcgc ccgtttccgc tacgacaccc acgccgattt
      961 gatgaacggg ctgccggaaa ccgtttttct gaacattgcc catccgagtt tacagtatgt
     1021 ggtttcaatg ctgcaactgg aaagcaaaaa acctttgacg gggacggttt ccatggtcaa
     1081 cgcattgtcg tccgtcctgc tggtgcttat cctgcgcgcc tatctcgaac aggataagga
     1141 tgtcgaactc tcgggcgtat tgaaaggttg gcaggacaaa cgtttgggac atttaatcca
     1201 aaaggtgata gacaaaccgg aagacgaatg gaatgtcgac aaaatggtgg cggctgccaa
     1261 tatgtcgcgc gcgcaactga tgcgccgttt caaaagccgg gtcggactca gcccgcacgc
     1321 ctttgtgaac catatccgcc tgcaaaaagg cgcgttgctg ctgaaaaaaa acccggattc
     1381 ggttttgtcg gtcgcactgt cggtaggctt tcagtcggaa acgcacttcg gcaaggcgtt
     1441 caaacggcaa tatcacgttt cgccgggtca ataccggaaa gaaggcgggc aaaaataaat
     1501 cggggcttca aacgcaaatg ccgtctgaaa aggctttcat acagcatttg cgtaccgcgt
     1561 catttcaagg gctgcatctt catcacttcc atcaaaaagt tggtaaatgc ggggttgttg
     1621 ggtttgacat ccatattttt ccaacgctgc tgccagccgc gcaaggcatt ctggatatac
     1681 agcttggact gttccgtatt gattgcgccc cgctggctgt ctatcgccga acgcaggtag
     1741 atttcataca tactgtcatc gacggcattg cgtccgacca ggcgttttct gaagttgttc
     1801 agatattgcg ccgcctgaac cttggtcatt ttaccgatac ccacctgata gcccaagcgc
     1861 gtcgcttcat cgctgatttt ggcaacatcc gtccaatgcg aagaggcaag gcggaaacct
     1921 tttgcaggtg cttccgtttt gacggtattg ataggattca cggggatttc cgtcaatgtg
     1981 ggcacataaa tagactggca gccggaaaga actgccacaa tggaaagagg gataaggtat
     2041 tttttcatgc ccccattata atcaagtttg ccttgagaaa acaaattgtt cggcaagaaa
     2101 aataaaattt cggcatcaga agcaggcaaa aacacattcc acaagccttg ccgcaaggtt
     2161 tacaatccga ccgtccttat cgcaacgacc gtttatggat accgcaaaaa aagacatttt
     2221 aggatcgggc tggatgctgg tggcggcggc ctgctttacc attatgaacg tattgattaa
     2281 agaggcatcg gcaaaatttg ccctcggcag cggcgaattg gtcttttggc gcatgctgtt
     2341 ttcaaccgtt gcgctcgggg ctgccgccgt attgcgtcgg gacaccttcc gcacgcccca
     2401 ttggaaaaac cacttaaacc gcagtatggt cgggacgggg gcgatgctgc tgctgtttta
     2461 cgcggtaacg catctgcctt tggccaccgg cgttaccctg agttacacct cgtcgatttt
     2521 tttggcggta ttttccttcc tgattttgaa agaacggatt tccgtttaca cgcaggcggt
     2581 gctgctcctt ggttttgccg gcgtggtatt gctgcttaat ccctcgttcc gcagcggtca
     2641 ggaaacggcg gcactcgccg ggctggcggg cggcgcgatg tccggctggg cgtatttgaa
     2701 agtgcgcgaa ctgtctttgg cgggcgaacc cggctggcgc gtcgtgtttt acctttccgt
     2761 gacaggtgtg gcgatgtcgt cggtttgggc gacgctgacc ggctggcaca ccctgtcctt
     2821 tccatcggca gtttatctgt cgtgcatcgg cgtgtccgcg ctgattgccc aactgtcgat
     2881 gacgcgcgcc tacaaagtcg gcgacaaatt cacggttgcc tcgctttcct atatgaccgt
     2941 cgttttttcc gccctgtctg ccgcattttt tctgggcgaa gagcttttct ggcaggaaat
     3001 actcggtatg tgcatcatcc tcagcggtat tttgagcagc atccgcccca ctgccttcaa
     3061 acagcggctg caatccctgt tccgccaaag ataaaaaatg ccgtccgaac atccttcaga
     3121 cggcatatcg ggctttattt ccccgccttc acatcctgcc actggcgcac cataaacttc
     3181 aatgccgccg gctggatagg caccatgata aagctgtttt tcaaatcctc ctcggttggg
     3241 aaaatcgtat tgtcgttttt aaattcgtct tccatcagct cacgcgccgg cttgctcgaa
     3301 ggcgcataag taacgaaatt gccgtttttc gccgacactt ccgggtcgag gaagtcgttg
     3361 atgtatttgt gcgcgttggc gacgtttttc gcatctttcg gaatcacgaa agaatccacc
     3421 caaatcccca cgccctcttt gggcatcatc acgcggattt tttccttgcc gcccgcttct
     3481 tcggcacggc gtttggcgat gttcaaatcg ccgccgaaac cgattgttac gcaggtatcg
     3541 ccgcgcgcca aatcatcgat aaagccggac gaagtgaagc gtttgatatt ggggcggttt
     3601 ttcttgagca gggcggttgc ctccctgatg tcttccgtat tgctgctgtt cgggttttta
     3661 cccaaatagt tcaacaccat aggatagatt tccgccgcgc tgtccaaata gctgatgccg
     3721 cattgcttga gtttggacgt gtattcgggg tcgaacacca aatcccactg gttgtccggc
     3781 agcttgtccg tacccaaagc ctttttcacg cgttcggtat tgatggcgaa ggtatttgtc
     3841 ccccaataaa acggcacggc gtattcgtgg ccgggatcga ccccgtccat cagcctcatc
     3901 atttcagggt tgaggtgttt ataattggga atcagcgact tatcgatttt ctgatacgca
     3961 cctgccttaa tctgcctgcc cacaaacgca ttggacggcg cgacaatgtc gtaaccggat
     4021 tttccggtca gcaccttgct ttccagcgtt tcatcgctgt cgtacacatc ataagtaacc
     4081 ttgatgccgt ttttcttttc aaaatcggca acggtttccg gatcgacgta ttccgaccag
     4141 ttgtaaattt tcaatacgtt tcggttttcc gccggcgccg gtttttcggc aggcggtttg
     4201 tccgaaccgc cgcacgctgc aagcagcaaa gcagtcagga cggcgagtgg cagatgtttg
     4261 gccattatca ttccttgcat atcgggttgg agaaagcggc cattatagcc gatattggca
     4321 acagggcttc agacggcatt caaaatcccg ccacactctt ccgaaaaccg ccgcttccat
     4381 agctagaaac agggatttgc ggtaagatac cgccgttcgt tttccctgct tttaccatga
     4441 cacgacattt gagagacatt gaaaaaatta tgaaaacctc cgaactgcgc caaaaattcc
     4501 taaaattttt tgaaaccaaa ggccacaccg tcgtccgctc ttccagcctc gtgccgcacg
     4561 acgacccgac cctgctgttt accaacgcgg gcatgaacca atttaaagac gtattcttag
     4621 gtttcgacaa acgcccgtac agccgcgcca ccaccgcgca aaaatgcgta cgcgccggcg
     4681 gcaaacacaa cgacttggaa aacgtcggct acaccgcccg ccaccacacc ttctttgaaa
     4741 tgatgggcaa cttctccttc ggcgactact tcaaacgcga cgccatccat ttcgcttggg
     4801 agtttctgac ttcccccgaa tggctcaaca tccctaaaga caaactgttg gcgaccgttt
     4861 acgcagaaga cgacgaagcc tacaacatct ggttgaacga aatcggtatg ccgtctgaac
     4921 gcatcgtccg catcggcgac aacaaaggcg cgaaatacgc gtccgacaac ttctggcaaa
     4981 tgggcgacac cggcccttgc ggcccctgct ccgaaatttt ctacgaccac ggcgaagaaa
     5041 tttggggcgg cattcccggc agccccgaag aagacggcga ccgctggatc gaaatttgga
     5101 actgcgtatt catgcagttc aaccgcgacg aacaaggcaa tatgaatccg ctgcccaagc
     5161 cgtccgtcga taccggcatg ggcttggaac gcatggccgc cgtcatgcag catgttcaca
     5221 gcaactacga aatcgacttg ttccaagacc tgctcaaagc cgttgcccgc gaaaccggcg
     5281 cagctttcag catggaagaa ccaagcctaa aagtcatcgc cgaccacatc cgctcctgct
     5341 cattcctgat tgcagacggc gtattgcctt ccaacgaagg ccgcggctac gtattgcgcc
     5401 gcattatccg ccgcgccgtg cgccacggtt acaaactggg tcaaagcaaa ccgttcttcc
     5461 acaaactcgt tgccgatttg gtcaaagaga tgggcggtgc ctaccctgag ttgaaagaga
     5521 aacaagcaca aatcgaagaa gcgttgaaaa acgaagaaag ccgttttgcc caaacgctgg
     5581 aaactggtat ggctttgttg gaaaacgcgc tggccaaagg cggcaaaaca ctcgacggcg
     5641 aaatcatctt caaactctac gatacttacg gtttcccata cgatttgacc gccgacatct
     5701 gccgcgaacg caatatcgaa ctggacgaag caggcttcga gcgcgaaatg gaagcccaac
     5761 gcgcacgcgc acgcgccgca caaagcttca aagccaacgc ccaactgcct tacgacggtc
     5821 aagataccga gtttaaaggt tatagcgaac gccaaaccga atccaaagtc ctctccctat
     5881 acaaagacgg cgagcaagtc aacgaattga acgaaggcga cagcggcgca gtcgtcatcg
     5941 actttacccc gttctatgca gaatccggcg gccaagtcgg cgatgtcggc tatatcttct
     6001 caggcgaaaa ccgctttgaa gtacgcgata cccaaaaaat caaagcggcc gtattcggtc
     6061 aattcggcgt acaaacttca ggccgtctga aagtcggcga cagcgttacc gccaaagtag
     6121 atgacgaaat ccgcaatgcc aatatgcgca accacagcgc gacccacctg atgcacaaag
     6181 ccctgcgcga cgtattgggc ggacacgtcg aacaaaaagg ctctttggtt accgccgaat
     6241 ccacccgttt cgacatttcc catccccaag cggtaactgc cgaagaaatc gccgaagtcg
     6301 aacgccgagt caacgaagcc atcttggcca acgttgccgt caacgcagcc attatgagca
     6361 tggaagatgc ccaaaaaacc ggcgccatga tgctcttcgg cgaaaaatac ggcgacgaag
     6421 tgcgcgtact gcaaatgggc ggtttctcca ccgaattgtg tggcggtaca cacgtttcac
     6481 gcaccggcga catcggcctc ttcaaaatca tcagcgaagg cggtattgcc gcaggcgtgc
     6541 gccgtatcga agccatcacc ggcctgaacg cactcaaatg ggcgcaagag caagagcgtt
     6601 tggtgaaaga catcattgct gaaaccaaag cccaaaccga aaaagacgta ctggcgaaaa
     6661 tccaagcagg cgcggcacac gccaaagcat tggaaaaaga attggcacgc gccaaagccg
     6721 aactcgccgt ccacgcaggc gcaaaactct tggacgacgc aaaagacttg ggcgcagcca
     6781 aactcgttgc cgcccaaatc gaagccgacg cagccgccct gcgcgaaatc gtaaccgacc
     6841 tgaccggaaa atccgacaac gccgtgattc ttttagcggc agtaaacgac ggcaaagtct
     6901 ccctgtgcgc cggcgtatcc aaaccgttga ccggcaaagt gaaagcaggc gatctggtta
     6961 aatttgcagc cgaacaagtc ggcggcaaag gaggcggccg tcccgacttg gcgcaggccg
     7021 gcggcacgga tgccggcaaa ttgcccgaaa tgctggtaag cgtggaaagc tggctttgtc
     7081 agaaattaag ttaaatttaa atcttaataa gccatttgag tcttgttcaa atggcttata
     7141 ttttggattg ttagaatgaa tactaaaaca gagttacaaa aacttttaga agaggatata
     7201 tcaactttaa cagaaacact aatttgtgca gatgctcttc ctccaagata tgtacgtagc
     7261 attgcaactc ctattgtccg tcgatggtta attgacaaac aattaaatat tctcgcaaaa
     7321 gaaataggtt taactataga attgcccatc cttgatacaa gtttggtatt tgaaaaattg
     7381 tcaaccttag agaataaagt taatttttat atggctggtg gagtttattt aggcggagaa
     7441 tttattagct ctatatatca ttcatcacaa gaattttctg gtgaaccaat aatctatgct
     7501 gaaccaaata taattttatg tcctgctgaa aaatttttaa ctttaaaacg agttttccat
     7561 aatggaaata tttttaatat gaatcagata attacttttt tatccaataa acaaggagga
     7621 gtacattttg ataaaaatta cgataaatat aaaacttggc aagttgctat agaaaaagca
     7681 gcaaattttt taaaactcgg taatccatat aatgaagata aattatctct tagtgaagaa
     7741 catgatacta ttttagtagt tttaccatta gaaaaaggat atgaatggaa ttgtcttgag
     7801 atagaagtac tatccgctgc tcaatctcta gcaaatatct attgcaacaa agttcgcctc
     7861 atagatggtc atgtttggaa ggaataaaag aaaaagcata gttggtaatt tttagttacg
     7921 tagggtgggc ttcagcccac cgttttttca tttttgattg ttgattggtg ggctaaagcc
     7981 caccctacgg ttactaaaat cccgtcatta cctcgcaggt gggaatccgg tttgttcggt
     8041 ttcggttttt tagggacagt gccgcaacat taaatttcca gattcccact ttcgcacaaa
     8101 taacagcgca aatagggcaa agataaggat atggggtttt ttctttgaat ttactataca
     8161 attcgcccgt ccccgttata gaaacccaag ccgatgaaaa ccctgctcca actccaaacc
     8221 gccgcacaaa acttcgccgc ctactacaaa gaccaaaccg acgaacgccg cgagaaagac
     8281 accttctaga acgaattttt cgccattttc ggcatcgacc gcaaaaacgt cgcccacttc
     8341 gaataccccg tcaaagaccc tgccgacaac acccaattcg tcgatatatt ttgggaaggc
     8401 atcttccttg ccgaacacaa atccgccaac aaaaacctga ccaaggccaa agagcaggcg
     8461 gagcgttatt tgcaggaaat cgggcgcacc aagccctctg cgctgcccga atattacgcc
     8521 gtcagcgatt ttgcccattt ccacctttat cgccgcgtac ctgaagaagg cgtggaaaac
     8581 caatggcagt tccctttgga agcattgccc gaatacatca cgcgcggcgt tttcgacttc
     8641 atgttcggca tcgaagccaa agtccgccaa attcaagaag aagccgatat tcaagcggcg
     8701 gcggccatcg gcaggctgca cgacgcgctc aaagaagaag gcatttacga agaacacgag
     8761 ctgcgcctct tcatcacgcg cctgcttttc ctcttttttg ccgacgacag cgccgttttc
     8821 cagcgcaact atctctttca agacttttta gaaagctgca aagaaaccga cacgctcggc
     8881 gacaagctca accaactctt tgaattcctc aacacacccg accaaaagcg cagcaagacc
     8941 caaagcgaaa aatttaaagg tttcgaatac gtcaacggcg gcctgtttaa agaacgcctg
     9001 cgcaccttcg acttcaccgc caagcagcac cgcgccttaa tcgactgcgg caatttcgac
     9061 tggcgcaac
//
LOCUS       DAWKJW010000066         9051 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.066, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000066 DAWKJW010000000
VERSION     DAWKJW010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9051
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.066"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(176..868)
                     /locus_tag="WJJ54_001102"
     CDS             complement(176..868)
                     /locus_tag="WJJ54_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEZ7341979.1"
                     /translation="MKRFTYTLSDGLCIEIELKRSAKKNLILRPVNMQTVSINVPPFF
                     QDHALANWLAANETILRNTLAKTPVHPVSHPNLPEWIWYRGIKTKLDTHSQSHIRITS
                     SEILLPRKETAAQIDHLRRLLNERAREYLLPRLEKHAAETGLTPTATDLSNAKTFWGV
                     CRPHTGIRLNWRLIGTPEYVADYVCIHELCHLRHPDHSPRFWHLVNTLTPHTDNAKSW
                     LKAHGRELFVLG"
     gene            complement(976..2169)
                     /locus_tag="WJJ54_001103"
     CDS             complement(976..2169)
                     /locus_tag="WJJ54_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEZ7341980.1"
                     /translation="MSDQKNRRNALIGAAFLMATSAIGPGFLTQTATFTQALAASFGF
                     VILLSILLDIGAQLNIWRIVAVSEKQAQDIANQVLPGAGYFLAVLIVMGGLAFNIGNV
                     GGAGLGLNLLTGLSPETGAVISGVIAIGVFLFKEAGKVMDKFAQVMGFVMIALTVYVA
                     WLANPPLADAAVHTFMPEKLDAMAIVTLVGGTVGGYITFAGAHRLLDAGIKGKSALPE
                     VSQSSVRAILIASIMRIVLFLAVLGVVSQGVQLNPDNPASTPFEYAAGYIGLLIFGVV
                     IWAASITSVIGAAYTSVSFFSGLSPSIERNKNKWIIAFIAVSTAVFSTIGKPAQVLVF
                     VGALNGLILPISLGLILIAAYKTKIVGDYKHPLWLTVSGVIVVGLMAVLSAITISKYI
                     GGLFG"
     gene            complement(2298..3035)
                     /gene="pxpA"
                     /locus_tag="WJJ54_001104"
     CDS             complement(2298..3035)
                     /gene="pxpA"
                     /locus_tag="WJJ54_001104"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HEZ7341981.1"
                     /translation="MKQVDLNADLAEGCGSDEALLQLITSANIACAQHAGSIADIRAA
                     LAYAQQNGVRIGAHPGYPDRENFGRTEMNLSEADLRACLNYQLGALQALCRDQGLEMA
                     YVKPHGAMYNQAAKNRALADTVARIVADFDPKLKLMALSGSLLLEAGKAAGLGVISEV
                     FADRRYMPDGTLVPRSRPDAQVDSDEEAIAQVLQMVRDGQVKAVDGSLVAVQADSICL
                     HGDGPHAVVFAEKIRQELLAAGIKVSA"
     gene            complement(3022..3951)
                     /locus_tag="WJJ54_001105"
     CDS             complement(3022..3951)
                     /locus_tag="WJJ54_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HEZ7341982.1"
                     /translation="MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILL
                     GNDEGTAAIEIALGGIMLVFERDTPFCLTGAVYQAELDGEPVYSYWRYTARKGQTLKM
                     VRAVQGMYGYVCVAGGFDVPEVMGSRSTDLKAGFGGHQGRMLQKGDCLPIGKGAQELS
                     KVGIAPIPFTDTVHLVPSSEYAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLS
                     QPLEMLSHAVQAGTVQVPPGGKPIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSK
                     VKFKIIGLKEATALRRKNQVYLNQIRRITHEAG"
     gene            complement(3948..4595)
                     /gene="pxpB"
                     /locus_tag="WJJ54_001106"
     CDS             complement(3948..4595)
                     /gene="pxpB"
                     /locus_tag="WJJ54_001106"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HEZ7341983.1"
                     /translation="MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEE
                     VVVGMNNLTVFTRFDTDLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAE
                     VAAFHQTVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGS
                     VGIGGSQTGVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP"
     gene            4779..6986
                     /gene="uvrD"
                     /locus_tag="WJJ54_001107"
     CDS             4779..6986
                     /gene="uvrD"
                     /locus_tag="WJJ54_001107"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HEZ7341984.1"
                     /translation="MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLT
                     TRIAWLLQTGQASVHSIMAVTFTNKAAKEMQTRLGAMIPINVRAMWLGTFHGLCHRFL
                     RLHHRDAGLPSSFQILDGGDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRA
                     SVLSAPDPHTSRMIECYAEYDKICQREGVVDFAELMLRSYEMLQSNEILRQHYQNRFN
                     HILVDEFQDTNKLQYAWLKLMAGGNAAVFAVGDDDQSIYRFRGANVGNMTALMEEFHI
                     DAPVKLEQNYRSVGNILAAANAVIENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAR
                     FIVDETKALEREGWDLDEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIK
                     HALAYLRLAVNPDDDNALLRVINFPPRGIGARTVENLQTASNEQGITLWQAACNAGAK
                     AAKIAAFVRLIEALRNQVGQLPLSEIIVGILKDSGLTEHYRTQKGDNQDRLDNLDELV
                     NAAIEFKPEDSNFETLPENISDDPAFPILAFLSNATLESGENQAGAGEKAVQLMTVHA
                     AKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEERRLMYVAITRARKRLYITMAQQRM
                     LHGQTQFGIVSRFVEEIPPEVLHYLSVKKPAYDSYGNTRQTATFKDKIIDDYKQPQTY
                     AGFRIGQNVRHAKFGTGVIIDAADKGESARLTINFGKQGVKELDTKFAKLEAM"
     gene            7343..7882
                     /locus_tag="WJJ54_001108"
     CDS             7343..7882
                     /locus_tag="WJJ54_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEZ7341985.1"
                     /translation="MSQVFKDFDLSSVWESDSWADENYKEAPFTPEILAAVESELGYK
                     LPQSFIELMAVQNGGIFVKNCFPTTQRNSWAKDHVQICEVSGIGFEKEGSLCGETGQK
                     LWMEEWEYPPIGVYFANDPSGGHAMFALDYRECGKDGEPKVVFVEQESDFEIVELAPD
                     FETFIRSLRHEDEFIDEEI"
     gene            complement(8072..8287)
                     /locus_tag="WJJ54_001109"
     CDS             complement(8072..8287)
                     /locus_tag="WJJ54_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341986.1"
                     /translation="MNIINYTGDDIIISLTREELQLLRSLVIEIYAGVCIDAEEFEIV
                     SGIRNSKLVQELEQQLIEAYDLMDTKG"
     gene            complement(8295..8498)
                     /locus_tag="WJJ54_001110"
     CDS             complement(8295..8498)
                     /locus_tag="WJJ54_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341987.1"
                     /translation="MLKRNLGFDTFKLITIFFLGIRRLQSKHIRAIWDDKSGAIVIRD
                     PNSKDGGTAFRPTLGKTYFDKQK"
     gene            complement(8411..8770)
                     /locus_tag="WJJ54_001111"
     CDS             complement(8411..8770)
                     /locus_tag="WJJ54_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HEZ7341988.1"
                     /translation="MIKLDLKSINLYDIDFEKFTPEIPDNFHRWIDLDIGIEGEQGSS
                     IFSLCICSPKWISHHCNKEGFFWSNALILEQFDHKIIKSEIDKILEYCSKETWDLTLS
                     NLLRFFSWEFEDYNPNT"
     gene            8823..>9051
                     /locus_tag="WJJ54_001112"
     CDS             8823..>9051
                     /locus_tag="WJJ54_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ7341989.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTARTATEPDSIVYTDCYRSYDV
                     LDVSEFSHFRINHSTHFAERQNHINGIENFWN"
BASE COUNT         2288 a         2491 c         2233 g         2039 t
ORIGIN      
        1 cctctttcag ttacagcagc ttgatccctt tcccttatcc aacgggggga aggctaggat
       61 agggtggctt gcaaatatac agaacaaggg acaagagcca ccctctctcc aaccctctcc
      121 ctccgtacgg gagggggtgg attctcgcgg gcgaagccca cgctacggtt agcctttacc
      181 ccagcacaaa caattcccgc ccgtgcgcct tcagccaact tttagcattg tcggtatgcg
      241 gcgtcagcgt gttcaccaaa tgccaaaagc gcggactgtg gtcggggtgg cggaggtggc
      301 agagttcgtg gatgcagaca tagtcggcga cgtattcggg cgtgccgatc agccgccagt
      361 tgaggcggat gccggtgtgc gggcggcata cgccccaaaa ggttttggcg ttgctcaggt
      421 ctgtggcggt gggcgtcagt cctgtttcgg ctgcgtgttt ttcaaggcgg ggcagcaggt
      481 attcgcgggc gcgttcgttc aacaggcggc gcaggtggtc gatttgtgcg gcggtttctt
      541 ttcggggaag caggatttca gacgacgtga tacggatatg gctttggctg tgggtatcca
      601 gcttggtctt tattccccga taccaaatcc actcgggtaa gtttgggtgg gaaacaggat
      661 gcacgggcgt tttggcaagc gtgttccgca aaatcgtttc gtttgccgcc agccagtttg
      721 ctaacgcgtg gtcttgaaaa aagggtggga cgttgatgct gaccgtctgc atattgacgg
      781 ggcgcagaat cagatttttc ttggcactgc gtttgagttc gatttcgatg cacaagccgt
      841 cggaaagagt ataggtgaag cgtttcatag ttgtgaatag gtttcagacc ggatacatcg
      901 tctgaaacag gaattttcca tatcaggcgg caaacttcgg ataatataca aaatcaaaca
      961 tctgcgctac aaggttcagc cgaacaagcc gccgatatat ttgctgatgg tgatggcgct
     1021 gagtactgcc atcaaaccga ccacaatcac gccggaaacg gtgagccaca gcgggtgttt
     1081 gtagtcgccg acaattttgg ttttgtaggc ggcaatcaga atcagaccga gggaaatcgg
     1141 taaaatcagg ccgtttaatg cgcctacgaa caccagcacc tgcgccggtt tgccgatggt
     1201 ggaaaatacg gcggtggaca cggcgataaa ggcaataatc catttgtttt tattgcgttc
     1261 gatagacggg ctgagaccgg agaagaacga caccgaagta taagccgcac caatcaccga
     1321 agtaatcgaa gccgcccaaa tcaccacgcc gaaaatcagc aggccgatgt atcccgccgc
     1381 atattcaaac ggtgtggaag cagggttgtc gggattgagc tgtacgcctt ggctgaccac
     1441 gcccaaaacc gccaaaaaca atacaatccg cataatcgag gcaatcagga tcgcccgcac
     1501 cgagctttgg ctcacttccg gcaacgccga tttgcctttg atacctgcgt ccagcagacg
     1561 gtgcgcaccg gcgaaggtga tgtagccgcc gaccgtgccg cccaccagtg taacaatcgc
     1621 cattgcatcg agtttttccg gcataaaggt atgcacggcg gcatctgcca gcggcggatt
     1681 cgccagccat gccacataaa ccgtcagcgc aatcattacg aaacccatca cttgggcgaa
     1741 tttgtccatc actttgcctg cttctttaaa cagaaacaca ccgatggcaa tcacgccgct
     1801 gatcacggca ccggtttccg gcgacagtcc ggtcagcagg ttcagaccca agcctgcgcc
     1861 gccgacgttg ccaatattga acgccaaacc gcccatcaca atcagcacag ccaagaaata
     1921 gcctgcgccg ggcaagacct gattggcaat atcctgcgcc tgtttttcgg aaacggcgac
     1981 aatccgccaa atattgagct gcgccccgat gtcgagcaga atcgagagca gaatcacaaa
     2041 gccgaaactt gccgccagtg cttgggtgaa ggtggcggtt tgggtcagaa agcccgggcc
     2101 gatggcggaa gtcgccatca ggaatgcagc gccgattaag gcatttctgc ggtttttttg
     2161 atcagacata atcgcttatc ctctataaaa ttggttgttg ctgtgtttgg gcgaaacctg
     2221 cggttttagc tacgcagaaa ctcgctttgc tcgttttggc gaaacctgcg gttttcagac
     2281 ggcctatgaa ctgtttttca agcagaaact ttgatgcctg ccgccagtag ttcctgccgg
     2341 attttttcgg caaacaccac ggcgtgcggc ccgtctccgt gcagacagat gctgtcggct
     2401 tgcacggcaa ccaggctgcc gtccactgct ttgacctgcc cgtcccgcac catctgcaat
     2461 acttgggcga tggcttcttc gtcgctgtcc acctgcgcat cggggcggct gcggggaacc
     2521 agcgtaccgt cgggcatata gcggcggtcg gcgaatactt cggaaatcac acccaagcct
     2581 gcggcttttc cggcttccaa gagcaggctg ccggaaagtg ccatcaattt caatttcggg
     2641 tcgaaatccg ccacaattcg ggcaacggta tccgccagcg cacggttttt cgccgcttga
     2701 ttgtacattg cgccgtgagg tttgacataa gccatttcca aaccctgatc acggcacaag
     2761 gcctgcaatg cgcccaactg gtaattcaga cacgcccgca aatcggcttc ggacagattc
     2821 atttcggtac ggccgaagtt ttcccgatcg ggatagccgg ggtgtgctcc gatgcgcacg
     2881 ccgttttgtt gggcatacgc caatgccgcc cgaatatcgg caatgctgcc ggcgtgttgg
     2941 gcgcaggcga tgttggccga agtaatcagc tgcaacaagg cttcgtcgct gccgcagcct
     3001 tcggcgagat cggcgtttaa atcaacctgc ttcatgggtg attctccgta tttggttcag
     3061 atagacttgg tttttgcgcc gcagggcggt ggcttctttc aagccgatta ttttgaattt
     3121 gactttgctg ccgaagcgca cctgtgccag cctgcccaaa tcggcggcgg caacggtagc
     3181 gattttcgga taaccgccgg tggtttgcgc atcggccagc aggataatcg gtttgccgcc
     3241 gggcggcacc tgcacggttc ctgcctgaac agcgtgggac agcatttcca aaggttgcga
     3301 cagggtcagc ggctgtccgt cgaagcggta gcccatgcgg ttgctatcgc tttgcagcgt
     3361 ccacgtttcc cgttccagat tcagacgccc tttttcactg aaagcggcat attccgacga
     3421 aggaacaagg tggacggtat cggtaaacgg tatcggggca atgccgactt tggacaattc
     3481 ctgcgcacct ttgccgatgg ggagacaatc acctttttgc agcattctgc cctgatggcc
     3541 gccgaaaccg gctttcaggt cggtgcttct cgaacccatc acttccggca catcaaatcc
     3601 gcccgccacg cacacatagc cgtacatgcc ctgcacggca cgcaccattt tcaaggtctg
     3661 ccctttgcgg gcggtataac gccaatacga atagaccggt tcgccgtcca attccgcctg
     3721 atacacggca ccggtgagac aaaacggcgt atcccgttca aacaccagca ttatcccgcc
     3781 caaagcgatt tcgattgcgg ccgtgccttc gtcgttgccc aataaaatat tacccgccgc
     3841 caaagcaacc gtgtccatcg caccggcatg accgatgccg taacgccggt gtccgtagcg
     3901 tccagtatcc tgaatatgcg ccggtgcctg cactgccgaa acgtgaatca tggctcaatc
     3961 ctttctgcaa caaagcggac ttggtcaccc gccgccagca gggtcggcgg attcaaatcg
     4021 gctcggaaca agggtaattc ggttctgccg ataatctgcc agccgccggg cgaagcgaac
     4081 ggatacacac cggtctgact gccgccgata ccgaccgaac cggcaggaac ggacgttctc
     4141 ggcacggcac ggcggggcgt gtgcaatgct tcgggcaagc cgcccagata agggaaaccg
     4201 ggctggaagc ccatcataaa tacggtataa gtttgcgccg tatggcggcg gacgatttcg
     4261 gaaataaccg tctgatggaa agcagcgact tccgccaaat ccgggccgta ttcgccgccg
     4321 tagcagacgg gaatttccac cagtttgccc tgatggtctg taacggcggt gtgttcccac
     4381 acatattgca attcatcggc aagcgtcgcc aaatcggtat cgaaacgggt gaacacggtc
     4441 agattgttca tgccgaccac cacttcctca atcctgtcgt gctgcccgag cgcagcggca
     4501 aacgcccaca acttttgctg tttgcccagt tcggaaggcg cattcagtcg gcagaccaaa
     4561 gcggattcgc tgattggtgt gatctctatt ctcatttgtt gttcattttg gttatgtttt
     4621 aatgaatcta tatgcagggg cggcggtttg tcaatatctt ctgtgctgca tcatcaaacc
     4681 gtcgattgga aaagtgctgc cctgccgctg cactttttca gacgacctta aaccgtttct
     4741 attaaaatag cgcattccac ttttcagacg gcatccttat gtttcccgac caatccgccc
     4801 ccaacctgct gcaaggcttg aatcccgaac aactctccgc cgtgacctgg ccgccgcaat
     4861 ccgcacttgt gctggcgggc gcgggcagcg gcaaaacgcg cgtgctgacc acgcgcatcg
     4921 catggctgtt gcaaaccggt caggcaagcg tgcacagcat tatggcggta acgtttacca
     4981 acaaagccgc caaagaaatg caaacccgac tcggcgcgat gattcccatc aacgtccgcg
     5041 ccatgtggct cggcacgttc cacggtctct gccaccgctt tttgcgcctg caccaccgcg
     5101 acgccggtct gccgtcttcc tttcaaatcc tcgacggcgg cgaccagctt tccctcatca
     5161 aacgcctgct caaaagcctc aacatcgccg aagaaatcat cgcgccgcgt tcgctgcaag
     5221 gctttatcaa cgcgcaaaaa gaatccggct tgcgcgcttc cgtcttgagc gcgcccgacc
     5281 cgcacacaag ccgcatgatc gaatgctacg ccgaatacga caaaatctgc caacgcgaag
     5341 gcgtggtcga ttttgccgaa ctcatgctcc gcagctacga aatgctgcaa agcaacgaaa
     5401 tcctgcgcca acactaccaa aaccgcttca atcacattct ggtcgacgaa ttccaagaca
     5461 ccaacaaact gcaatacgcc tggctcaaac tcatggcggg cggcaacgcg gcggtatttg
     5521 ccgtcggcga cgacgaccaa agcatctacc gtttccgtgg cgcaaacgtt ggcaatatga
     5581 ccgcgctgat ggaagaattc cacatcgacg cgcccgtcaa actcgaacaa aactaccgct
     5641 ccgtcggcaa catcctcgcc gccgccaacg ccgttatcga aaacaacgac gaacgcctcg
     5701 gcaaaaacct gcgcaccgac gccgaagcag gcgacaaaat ccgctactac tccgccttta
     5761 ccgacctcga agaagcccgg ttcatcgtgg acgaaaccaa agccctcgaa cgcgaaggct
     5821 gggatttgga cgaaatcgcc gtcctctacc gcagcaacgc ccaatcgcgc gtcatcgaac
     5881 aaagcctgtt ccgcagcggc atcccctaca aaatctacgg cggcttgcgc ttttacgaac
     5941 gccaagaaat caaacacgcg ctcgcctacc tacgcctcgc cgtcaatccc gacgacgaca
     6001 acgccctttt gcgcgtcatc aacttcccac cgcgcggcat cggcgcacgc accgtcgaga
     6061 accttcagac ggcctcaaac gaacaaggca tcaccctttg gcaggcagcc tgcaacgccg
     6121 gcgcgaaagc cgccaaaatc gccgccttcg tccgcctgat tgaagcactg cgcaaccaag
     6181 tcggacaact gcccctgtcc gaaatcatcg tcggcatcct caaagacagc ggcctgaccg
     6241 aacactaccg aacccaaaaa ggcgacaacc aagaccgcct cgacaacctt gacgaactcg
     6301 tcaacgccgc catcgagttc aaacccgaag acagcaactt tgaaaccctg cccgaaaaca
     6361 tttcagacga ccccgccttc cccatcctcg ctttcttgag caacgccacc ctcgaatccg
     6421 gcgaaaatca agcaggtgca ggcgaaaaag ccgtccaact catgaccgtc cacgccgcca
     6481 aaggcttgga attcaacgcc gtcttcctca ccggcatgga agaaggccgc ttccccagcg
     6541 aaatgagcct tgccgaacgc ggcggcctcg aagaagaacg ccgcctcatg tacgtcgcca
     6601 tcacccgcgc ccgcaaacgc ctctacatca ccatggcaca gcaacgcatg ctgcacggac
     6661 aaacccaatt cggcatcgtc tcccgcttcg tcgaagaaat cccacccgaa gtattgcact
     6721 acctgtccgt caaaaagcct gcctacgaca gttacggcaa cacgcgtcaa actgccacgt
     6781 tcaaagacaa aatcatcgac gactacaaac agccgcaaac ctacgcaggc ttccgtatcg
     6841 gacaaaacgt ccgccacgcc aaattcggca ccggcgtgat tatcgatgcc gcagataaag
     6901 gcgaatccgc ccgactgacc atcaacttcg gcaaacaggg cgtgaaagag ttggatacca
     6961 agtttgcgaa attggaagcg atgtaaattt gaaatgcagg ctggatactc gtatccgaca
     7021 aaaatatttg acgcgtctat cgtttccgaa aaaccgctgt tggaaaatgt cggattcgag
     7081 aatccgacct atggcaaaaa actgtagcaa ggacaaggca aaaggccgtc tgaatccggt
     7141 aacaacaaat tttgccgaaa cctccgccgt cattcccgcg caggcgggaa tccagacctt
     7201 tcggcacggg aacttatcgg ataaaaggtt tctttagatt ccacgttcta gattcccgcc
     7261 tgcgcgggaa tgacggacgg taaaagccgg gtatagatac ctaacccttg tttatagctg
     7321 aaaatcaata aggaagaaca ttatgtccca agtttttaaa gattttgatt tgtcctccgt
     7381 atgggaatcc gacagttggg cagatgaaaa ctacaaagaa gccccgttta cccctgaaat
     7441 tttggctgcc gtagaaagtg aactgggcta taaattgccg caaagtttta ttgaattgat
     7501 ggcggtacaa aacggcggaa tatttgtcaa aaactgtttt ccgaccacac agagaaattc
     7561 gtgggcgaaa gatcatgtgc aaatttgcga ggtatcgggc atcggctttg aaaaagaagg
     7621 gagtttgtgc ggcgaaacag ggcaaaaact ttggatggaa gaatgggaat atccgcccat
     7681 cggcgtgtat tttgccaacg acccgtcagg cggtcatgcc atgtttgcct tggactatcg
     7741 ggagtgtgga aaagacggcg agccgaaagt ggtgtttgtc gagcaagaat cggattttga
     7801 aatcgtcgaa cttgcccccg attttgaaac ctttatccgc agcttgcggc atgaagatga
     7861 gtttattgac gaggaaatat aaaacggcgg ttgaaaaacc ggaatcatca agggaaaacg
     7921 ggcgaaataa cggataatcg cttgaatccg taaggaaaac ggtttggtga aacgcgccat
     7981 ccaagacctt tgcaaagaaa aactgtctcc gacagcattg acattattaa cagaacttat
     8041 caagtttgga gctatctcaa atataattcg gttatccttt tgtatccatt aaatcatatg
     8101 cttcaattaa ttgttgttct agctcttgta ccaattttga attgcgaatt cctgacacaa
     8161 tctcaaattc ttctgcatct atgcaaacac ctgcataaat ttcaataaca agggaacgca
     8221 ataattgaag ctcttctctt gttaaagaaa taataatgtc atcacctgtg taattgatta
     8281 tattcataat aattttattt ttgtttgtca aagtaagttt tgcctaaggt tggtctaaat
     8341 gcagttccac catcttttga atttgggtct ctgattacaa ttgctccaga cttatcatcc
     8401 caaattgctc ttatgtgttt ggattgtaat cttcgaattc ccaagaaaaa aatcgtaata
     8461 agtttgaaag tgtcaaatcc caagtttctt ttgagcaata ttctaatatt ttatcaattt
     8521 cacttttaat aatcttatga tcaaactgtt ctaatattaa tgcattagac caaaaaaaac
     8581 cttctttatt acaatgatgg gaaatccatt taggagaaca aatgcaaagt gaaaaaatag
     8641 atgagccttg ttctccttcg attccgatat ccaaatctat ccatctatgg aaattatctg
     8701 gaatttcggg ggtaaatttt tcaaaatcaa tatcatataa atttatgctt tttaaatcca
     8761 atttaatcat tagggctgtc ctagataaat agggaaattc aaattaagtt agaattatcc
     8821 ctatgagaaa aagtcgtcta agccggtata aacaaaataa actcattgag ctatttgtcg
     8881 caggtgtaac tgcaagaaca gcaacagagc ctgacagcat tgtttatacg gattgttatc
     8941 gtagctatga tgtattagat gtgagcgaat ttagccattt ccgtatcaat cacagcacac
     9001 attttgctga acgacaaaac catatcaatg gaattgagaa tttttggaac c
//
LOCUS       DAWKJW010000067         9028 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.067, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000067 DAWKJW010000000
VERSION     DAWKJW010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9028)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9028)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9028
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.067"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..114
                     /locus_tag="WJJ54_001113"
     CDS             <1..114
                     /locus_tag="WJJ54_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase"
                     /protein_id="HEZ7341990.1"
                     /translation="EEIAWRNGWLSDEKLEELARPMAKNQYGQYLLRLLKK"
     gene            168..707
                     /gene="rfbC"
                     /locus_tag="WJJ54_001114"
     CDS             168..707
                     /gene="rfbC"
                     /locus_tag="WJJ54_001114"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEZ7341991.1"
                     /translation="MNIIDTALPDVKLLKPQVFTDGRGFFMETFRDGWFKENIADRTF
                     VQENHSKSGKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILS
                     AENKRQLWVPEGFAHGFYVLSDEAEFVYKCTDYYNPKAEHSLIWNDPTVGIDWPLQTA
                     PNLSPKDLAGKVLAEAVTF"
     gene            731..2845
                     /locus_tag="WJJ54_001115"
     CDS             731..2845
                     /locus_tag="WJJ54_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HEZ7341992.1"
                     /translation="MFLFSDGLQSINNNNRRKRIVKNAYIPSRGIRKIPHLFTLLPEF
                     HICKDGKGAEAVIGWGLRPTTHKARAFAAEHQLPFIALEDGFLRSLGLGVAGYPPYSI
                     VYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQAQQAMDFILQHHLSKYNHAPELSD
                     DHPLRSPSKPETVLIIDQTFGDMAIQYGGADASTFELMFQTALNENPQADIWVKTHPD
                     VLCGKKQGYLTQLAQQHRVNLLAEDINPISLLQNIDKVYCVTSQMGFEALLCGKPLTT
                     FGLPWYAGWGVSDDRHPKIDSLVQTQRRAPRNLLQLFAAAYLQYSRYLNPNTGEAGSL
                     FDVIDYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLAGVK
                     LSDDARILAWGNGKEAIVRFAEQHHIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMGI
                     YFNAEAPSRLEHILQNQNFDDQDFQTALKLQKMLTENHISKYNVGSSDFTAPSTDKTV
                     ILVPGQVEDDASIRYGSPQIYRNLDLLRTVRERNPNAYIIYKPHPDVVSGNRIGHISP
                     DDAARYADQTAEQADILTCLQYADEIHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLT
                     QDLLPIPRRSRRLELWQLVAGTLIYYPDYIHPKTHQAINAETAAQILIRQKNMQKNNN
                     GLHRGCFAKKLGKIKQLYRSFK"
     gene            2982..4241
                     /locus_tag="WJJ54_001116"
     CDS             2982..4241
                     /locus_tag="WJJ54_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HEZ7341993.1"
                     /translation="MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKT
                     VHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQEYITQHHIQAVVCFGDTRPYHV
                     IAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
                     KAPTPVRGGFTPMAKNAIRYYIELFRNLRKYPDYIHHRAPNAGHYLKPWSLSILKRLN
                     YYIEDIQIAKRVEAGKYGKFFIVPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAP
                     ADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELQGRVIYVHDVPLPVFLRHGLGMVTI
                     NSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLN
                     VTQINGNFYSQVFFPNKKTSDSSTPAT"
     gene            4608..6014
                     /locus_tag="WJJ54_001117"
     CDS             4608..6014
                     /locus_tag="WJJ54_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HEZ7341994.1"
                     /translation="MTAAPDILYRQAAALLEQSNTAQALPLLQQAAEQGYAEAAFVLG
                     NHLLQNGQPEQALSWLEAAAAQRHPKALFSLLQQREHNGTPTGQLLNDYAWLGEQGHS
                     EAQLILMRYHAQRNDPQSLYWAELAAARYAAPAYYHLARHHQRQGDVETAIEQYEKAA
                     ALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIAAQTLLADLLAAQRKPE
                     ALEWYRRAADKEQAEAQSKLAQYALTGELSERDPFQAARYAKAAAEKNHPEALKIMGD
                     LYRYGLGIKADNHIAQDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQ
                     TETIYRLAEAQACAIGRPADYNAARKNYMEAAGFHHKNAAAALGRIYHYGLGTAQDPR
                     AAAHWYAIAAEQNHPSAQYHLACFYYHGQGVGCHVPTACYWLQAAIGNGHTSAESLIS
                     LLEQWRREAHHAIGQKAV"
     gene            6232..7446
                     /gene="gltS"
                     /locus_tag="WJJ54_001118"
     CDS             6232..7446
                     /gene="gltS"
                     /locus_tag="WJJ54_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HEZ7341995.1"
                     /translation="MEWEFNSYYTLIAATLVLLVGKFLVQKIKFLRDFNIPEPVAGGL
                     VAAIILFALHEAYGVSFKFEKPLQNAFMLIFFTSIGLSADFSRLKAGGLPLVVFTAIV
                     GGFILVQNFVGVGLATALGLDPLIGLITGSVSLTGGHGTSGAWGPNFETQYGLVGATG
                     LGIASATFGLVFGGLIGGPVARRLINKMGRKPVENKKQDQDDNADDVFEQAKRTRLIT
                     AESAVETLAMFAACLAFAEIMDGFDKEYLFDLPKFVWCLFGGVVIRNILTAAFKVNMF
                     DRAIDVFGNASLSLFLAMALLNLKLWELTGLAGPVTVILAVQTVVMVLYATFVTYVFM
                     GRDYDAAVLAAGHCGFGLGATPTAVANMQSVTHTFGASHKAFLIVPMVGAFFVDLINA
                     AILTGFVNFFKG"
     gene            7545..8561
                     /locus_tag="WJJ54_001119"
     CDS             7545..8561
                     /locus_tag="WJJ54_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HEZ7341996.1"
                     /translation="MYRKLIALPFALLLAACGREEPPKALECANPAVLQGIRGNIQET
                     LTQEARSFAREDGRQFVDADKIIAAAYGLAFSLEHASETQEGGRTFCIADLNITVPSE
                     TLADAKANSPLLYGETALSDIVRQKTGGNVEFKDGVLTAAVRFLPVKDGQTAFVDNTV
                     GMAAQTLSVALLPYGVKSIVMIDGKAVKKEDAVRILSGKAREEEPSKPTPEDILEHNA
                     AGGDADVPQAAEGAPEPEILHPDDGERADTVTVSRGEVEEARVQNQRAESEITKLWGG
                     LDTDVQKELVGEQRKWAQEKISNCRQAAAQADRQEYAEYLKLQCDTRMTRERIQYLRG
                     YSID"
     gene            8572..8769
                     /locus_tag="WJJ54_001120"
     CDS             8572..8769
                     /locus_tag="WJJ54_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341997.1"
                     /translation="MNTVPKSRIPVKPLPEKTTDEAKVEKWRQLGAEHGLSGEWAVAA
                     RLGENGFTEEQMENIANLFGR"
     gene            8787..8936
                     /locus_tag="WJJ54_001121"
     CDS             8787..8936
                     /locus_tag="WJJ54_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7341998.1"
                     /translation="MPSETLLSVSDGILTNTVRRRKTAVFSCVSYADVSTHKTAHKAL
                     PYVPS"
BASE COUNT         2332 a         2602 c         2091 g         2003 t
ORIGIN      
        1 gaagaaatcg cttggcgcaa cggttggctt tccgatgaaa aactggaaga attggcgcgc
       61 ccgatggcaa aaaaccaata cggccaatat ttgctgcgcc tgttgaaaaa ataatgtttg
      121 aggccgtctg aaacttttca gacggccttt agatgaaaga taaaaagatg aacatcatcg
      181 acaccgccct ccccgacgta aaacttttaa aaccgcaagt cttcacagac gggcgcggct
      241 tttttatgga aaccttccgc gacgggtggt tcaaagaaaa tattgccgac cgaaccttcg
      301 tgcaggaaaa ccactccaaa tccggcaaag gcgtattgcg cggcctgcac tatcaaactg
      361 aaaacacaca aggcaaactc gtacgcgtgg ttgtcggcga agtattcgac gtggccgtcg
      421 atatgcgtaa agactccccc actttcggca aatgggtagg cgagattctg tccgcagaaa
      481 acaaacgcca actgtgggta cccgaaggtt tcgcacacgg cttctatgta ctgagcgatg
      541 aagccgagtt cgtctataaa tgcacagact attacaaccc caaagccgaa cactcactaa
      601 tttggaatga tccgaccgtc ggcatcgact ggccgcttca aaccgcgccg aacctgtcgc
      661 ctaaagactt ggcaggcaaa gtattggccg aagcagtcac gttttaagac tattcaggcc
      721 gtctgaaaga atgttcctct tttcagacgg cctacaatcc attaataaca ataatcgacg
      781 aaaacgcatt gtgaaaaacg cctacatccc ctctcgtggc atccgcaaaa tcccccatct
      841 cttcacccta ttgcctgagt ttcatatctg caaggatggg aaaggagcag aggctgttat
      901 cggctggggt ttgcgcccga cgacacacaa agcgcgtgct tttgccgctg aacaccagct
      961 tccctttatt gctttggaag acggcttttt acgctcgctt ggcctgggcg ttgccggcta
     1021 tcctccctat tccatcgtct atgacgacat cggcatctac tacgacacta cccgcccttc
     1081 tcgtttggaa caactgattc ttgccgccga taccatgccg tctgaaacct tggctcaggc
     1141 gcagcaggcg atggatttca tcctgcaaca ccacctgtcc aaatacaacc acgcgcccga
     1201 actttcagac gatcatcctt tacgctcccc atccaaacct gaaaccgtcc tcattatcga
     1261 ccaaacattc ggcgatatgg ccatccaata tggcggcgca gacgcctcta cgtttgaact
     1321 gatgtttcag acggccttaa atgaaaaccc gcaagccgat atttgggtca aaacccatcc
     1381 cgatgttttg tgcggcaaaa aacaaggcta tctgacccaa ctggcgcagc aacaccgcgt
     1441 caatcttctg gcagaagaca tcaatccgat ttctttgttg caaaacatcg ataaagttta
     1501 ttgcgttacc tcgcaaatgg gttttgaggc gcttttgtgc ggcaagccgc tgaccacttt
     1561 cggcctgccg tggtatgccg gatggggcgt gagtgacgac cgccatccta aaatcgacag
     1621 ccttgttcaa acccaacgcc gcgccccccg caacttgctg cagctcttcg ctgcagccta
     1681 tctgcaatac agccgctacc tcaaccccaa taccggcgaa gcaggcagcc tctttgatgt
     1741 catcgactat ctagcgacgg tcaaacgcaa aaacgacaaa ttgcgtggcg agttgtattg
     1801 cgttggtatg tctttgtgga aacgcgcggt tgccaaaccg ttctttaacg taccctcttg
     1861 ccgtctgaaa tttatctctt ccacccaaaa actggcaggg gtcaaactgt ccgacgatgc
     1921 acgcatcctt gcctggggca acggcaaaga ggccatcgtc cgctttgccg aacaacacca
     1981 catccccctg ctgcgcatgg aagacggctt tatccgatcg gtcggactcg gctctaattt
     2041 agtaccgcca ctgtcacttg ttaccgacga tatgggcatt tatttcaatg ccgaagcccc
     2101 atcccgtctt gaacacatcc tgcaaaacca aaacttcgac gatcaagact ttcagacggc
     2161 cttgaagctg caaaaaatgc tgaccgaaaa ccacatcagt aaatacaacg tcggcagctc
     2221 agacttcacc gccccgtcaa ccgacaaaac cgtgatcctc gttcccggcc aggttgaaga
     2281 tgatgcgtct atccgctacg gttcgcccca aatctaccgc aatctggatt tgctccgtac
     2341 cgtacgcgaa cgaaacccca atgcctatat catctacaaa ccgcatcccg atgtagtcag
     2401 cggtaaccgc atcggccata tttcccctga tgatgctgca cgatatgccg accaaaccgc
     2461 cgaacaagcc gacatcctga cctgtctcca atacgcagac gaaatacata ccatgacttc
     2521 gctgaccggt tttgaagcct tgttgcgcgg caaaaaagtc agctgctacg gcctgccttt
     2581 ctatgcaggt tgggggctta cccaagatct gctccctatt ccgcgccgca gccgcaggct
     2641 tgagctttgg cagctggttg ccggcacgct catctactat cccgactaca tccaccccaa
     2701 aacccatcag gccatcaatg cggaaactgc agcccaaatc ctgatacgac aaaaaaatat
     2761 gcaaaaaaac aacaacggat tacatcgcgg gtgctttgcc aaaaaattag gtaaaatcaa
     2821 acaactatat cgatctttca aataaatacc atcaaagtta acgatgcgtc ataaacttgc
     2881 ctctattgcg gcatcattgc ctttgcatcg ttaattctct tggcgtatgc ttgaaagttc
     2941 aacctaaaac tattacataa aaaacaaaac cacattgcaa catgaaacag accgtcctca
     3001 aaaataacct gcaaaacctg cttgaaagcg cagaaaatat cctgctgctt caaggccctg
     3061 tcggcgattt ttttctgcgc cttgccgact ggctgactgc aaacggcaaa accgtacata
     3121 aattcaactt taatgcaggc gacgactatt tttatccgcc cactcaagcg cataccgttg
     3181 tttttaacga caactacgat gcctttcctg agtttttgca agaatacatc actcaacatc
     3241 acatccaggc cgttgtctgc tttggcgaca cacgccctta tcacgtcatt gcaaaacgca
     3301 ttgcaaacga aaaccaagcc agtttctggg cgtttgaaga aggctatttc cgcccctact
     3361 acatcacctt agaaaaagac ggcgtcaacg cattttcccc gttgccacgc cgtgccgact
     3421 tttttcttga acaattccct aagcttgccc agcaagaata taaagcgcca acgccggtac
     3481 gcggcggatt tacgcccatg gcaaaaaacg ccatccgtta ctatatcgag ttgttccgca
     3541 atctacgcaa ataccccgac tacatccacc accgcgcacc caatgccggc cattacctca
     3601 aaccgtggtc gctctccatc ctcaagcgtt tgaactacta tattgaagac atccaaatcg
     3661 ccaaacgtgt ggaagcaggc aaatacggca agttttttat tgttcccttg caggtattca
     3721 acgacagcca agtccgtatc cattgcgact ttcccagcgt ccgcagcttc ctgctccatg
     3781 ttttgagttc atttgccgag cacgcgcctg ccgataccaa catcatcatc aagcatcatc
     3841 cgatggaccg cggttttatc gactactggc gcgacattaa acgctttatc aaagaacacc
     3901 ccgaactcca aggccgtgtg atttatgtcc atgatgtccc cctgcccgtt ttcctgcgcc
     3961 acggtctcgg catggttacc atcaacagca ccagcggcct gtccggactg attcacaata
     4021 tgccagttaa ggttctcggc cgtgcctatt atgatattcc cggtattact gaccaaaata
     4081 ccttggcaga attttggaat catccgacac cgcctgacaa agagctgttc catgcctacc
     4141 gaatgtacca cctcaacgtg acccaaatta acggcaactt ctacagtcag gtcttttttc
     4201 ctaacaaaaa aacctccgac tcttccactc cagcaacctg acttagcaaa aataattcag
     4261 gccgtctgaa aacatttcag acggcctgaa acaatcaata ccttagctac tgccatgtaa
     4321 ataaaacaca aaaacctgca tttatcatta acaataaatt acaaaaacag tataatgacc
     4381 gagctgccat gagcgcatac cgactcaacc tgagcccttt gtaacacaca aaatatggat
     4441 atatccctag gcaaaacaat ataacaagcc aaacatccta aagataagcc ggcaaggcaa
     4501 tacactctat aaaactgtgc cgagcaaaat ttttacaaag ccctcaaccg gtatcgccgc
     4561 ccatatgccg cagcatccgt cttccacttt atatccgccc gcaaaccatg accgccgctc
     4621 ctgatatcct ctaccggcaa gccgccgccc ttttggaaca atccaatacc gcccaagccc
     4681 tgcccctgtt gcaacaggcg gcagagcaag gttatgcgga agctgctttc gtattgggca
     4741 accatctgct gcaaaacggc caaccggagc aggcactttc atggttggaa gccgccgcgg
     4801 cccaacgcca tcccaaagca ctcttctccc tgctgcaaca acgcgaacac aacggcaccc
     4861 cgaccggaca gcttctcaac gactatgcct ggctgggtga gcaggggcac tcagaagccc
     4921 aattaatcct catgcgttac cacgcgcaac gcaacgatcc acaatcgctc tactgggcgg
     4981 aacttgctgc cgcccgatat gccgcacctg cgtattacca tctggcacgc catcatcaac
     5041 gccaaggcga cgttgaaaca gccatcgaac aatacgaaaa agcggcagca ctcggcgtaa
     5101 ctgccgcctg ctggcaactt ggtcaaatct acttctacgg tacaggtgtc agccccaacc
     5161 acgcacaagc cgaacactat ctcgaaccag ccgcacaagc cggccacatc gccgcacaaa
     5221 cgctgctggc tgaccttctt gccgcccaac gcaaacctga agccttggaa tggtatcgtc
     5281 gtgccgccga taaggaacaa gcggaagcac agtctaagct ggcccaatac gccctgaccg
     5341 gcgaactttc cgaacgcgat ccgttccaag cggcacgata tgccaaagcc gctgccgaga
     5401 aaaaccatcc tgaagccctg aaaatcatgg gcgacctcta ccgctacggt ctcggtatca
     5461 aagccgacaa ccatatcgcg caagattact accaccgtgc cgccgcgctg ggttctgccg
     5521 ccgcagcaca aaaactcatc agcgacgccg cgctgtacca tccgcaacaa tacgaacaaa
     5581 tcaaaactgc cgccctgcaa caacaacaaa ccgaaaccat ctaccgtttg gcggaagcac
     5641 aagcctgcgc catcggccgt cccgccgact acaatgccgc gcgaaaaaat tacatggaag
     5701 ctgccgggtt ccaccataaa aacgcagcgg cagccttagg ccgcatctac cattacggcc
     5761 tcggtacggc gcaagatcct cgggcggctg cacactggta cgccattgct gccgaacaaa
     5821 accacccttc cgcccaatac cacctcgcct gtttttacta tcacgggcaa ggtgtcggct
     5881 gtcatgttcc gaccgcctgc tactggctgc aggccgccat cggcaacggc cacacttcgg
     5941 ccgaatcatt aatatcccta ttagaacaat ggcgacgcga agcacaccat gccatcggac
     6001 aaaaggccgt ctgaaaagat ttacactcgc attttttgac aatctttaac tattccccta
     6061 atatttgcca gttatttttc acggacacgc cattgttttc atttctttct gaaaacacct
     6121 tgtccgcgca tcaataccat gacactcggc ggataacgcc aagcgttgaa acacactaca
     6181 tccggaacaa aaacggatgc tcggaaaaat atttctagga ggtgaaacaa catggaatgg
     6241 gaattcaaca gttattacac actgattgcc gccacgctcg tgttgctggt tggtaaattt
     6301 ctggttcaaa aaatcaaatt cttacgagac ttcaatattc ccgagccggt cgctggcggt
     6361 ttggttgccg cgattatcct gtttgcgctg cacgaggcgt acggcgtgag cttcaaattt
     6421 gagaaaccgc tgcaaaatgc gtttatgctg attttcttca cgtccatcgg cttgagcgcg
     6481 gatttttccc gtttgaaggc gggcggtttg ccgctggtgg tttttaccgc gattgtgggc
     6541 ggatttatct tggtgcaaaa ctttgtcggg gtcggactgg ctacggcttt gggtttggac
     6601 ccgctcatcg gtctgattac cggttcggtg tcgctgacgg gcggacacgg tacgtcaggt
     6661 gcgtggggac ctaattttga aacgcaatac ggcttggtcg gcgcaaccgg tttgggtatt
     6721 gcatcggcta ctttcgggct ggtgttcggc ggcctgatcg gcgggccggt tgcgcgccgc
     6781 ctgatcaaca aaatgggccg caaaccggtt gaaaacaaaa aacaggatca ggacgacaac
     6841 gcggacgacg tgttcgagca ggcaaaacgc acccgcctga ttacggcgga atctgccgtt
     6901 gaaacgcttg ccatgtttgc cgcgtgtttg gcgtttgccg agattatgga cggcttcgac
     6961 aaagaatacc tgttcgacct gcccaaattc gtgtggtgtc tgtttggcgg cgtggtcatc
     7021 cgcaacatcc tcactgccgc attcaaggtc aatatgttcg accgcgccat cgatgtgttc
     7081 ggcaatgctt cgctttcgct tttcttggca atggcgttgc tgaatttgaa actgtgggag
     7141 ctgaccggtt tggcggggcc tgtaaccgtg attcttgccg tacaaaccgt ggtgatggtt
     7201 ttgtacgcga cttttgttac ctatgtcttt atggggcgcg actatgatgc ggcagtattg
     7261 gctgccggcc attgcggttt cggcttgggt gcaacgccga cggcggtggc aaatatgcag
     7321 tccgtcacgc atactttcgg cgcgtcgcat aaggcgtttt tgattgtgcc tatggtcggc
     7381 gcgttcttcg tcgatttgat taatgccgcg attctcaccg gttttgtgaa tttctttaaa
     7441 ggctgatttt ccgcctttcc gacaaagcac ctgcaaggtt taccgcctgc aggtgctttt
     7501 gctatgatag ccgctatcgg tctgcaccgt ttggaaggaa catcatgtat cggaaactca
     7561 ttgcgctgcc gtttgccctg ctgcttgccg cttgcggcag ggaagaaccg cccaaggcat
     7621 tggaatgcgc caaccccgcc gtgttgcaag gcatacgcgg caatattcag gaaacgctca
     7681 cgcaggaagc gcgttctttc gcgcgcgaag acggcaggca gtttgtcgat gccgacaaaa
     7741 ttatcgccgc cgcctacggt ttggcgtttt ctttggaaca cgcttcggaa acgcaggaag
     7801 gcgggcgcac gttctgtatc gccgatttga acattaccgt gccgtctgaa acgcttgccg
     7861 atgccaaggc aaacagcccc ctgctgtacg gggaaaccgc tttgtcggat attgtgcggc
     7921 agaagacggg cggcaatgtc gagtttaaag acggcgtatt gacggcagcc gtccgcttcc
     7981 tgcccgtcaa agacggtcag acggcatttg tcgacaacac ggtcggtatg gcggcgcaaa
     8041 cgctgtctgt cgcgttgctg ccttacggcg tgaagagcat cgtgatgata gacggcaagg
     8101 cggtaaaaaa agaagacgcg gtcaggattt tgagcggaaa agcccgtgaa gaagaaccgt
     8161 ccaaacccac gcccgaagac attttggaac ataatgccgc cggaggggat gcagacgtac
     8221 cccaagccgc agaaggcgcg cccgaaccgg aaatcctgca tcctgacgac ggcgagcgtg
     8281 ccgataccgt taccgtatca cggggcgaag tggaagaggc gcgcgtacaa aaccagcgtg
     8341 cggaatccga aattaccaaa ctttggggag gactcgatac cgacgtgcaa aaagagttgg
     8401 tcggcgaaca acgcaagtgg gcgcaggaaa aaatcagcaa ctgccgacaa gccgccgcgc
     8461 aggcagaccg gcaggaatac gccgaatacc tcaagctgca atgcgacacg cggatgacgc
     8521 gcgaacggat acagtatctt cgcggctatt ccatcgatta ggggcaaacc gatgaatacc
     8581 gtcccaaaaa gcaggattcc cgtcaaaccg ctgcccgaaa aaaccacaga cgaagccaaa
     8641 gtcgaaaaat ggcggcagct cggtgcggaa cacggtttgt cgggcgaatg ggcagttgcc
     8701 gccagattgg gcgaaaacgg ttttaccgaa gaacagatgg aaaatatcgc caacctgttc
     8761 ggcagataaa gggaaaattg acggaaatgc cgtctgaaac cctgttatcg gtttcagacg
     8821 gcattttgac caatacggta cgcaggcgca aaacagccgt cttttcctgc gtttcctatg
     8881 ctgatgtttc aacacacaag acggcacata aagcgttgcc ctatgtgccg tcctgattcg
     8941 gaaggggtta cgcccctccc aaatatagtg gattaacaaa aaccagtacg gcgttgcctc
     9001 gccttagctc aaagagaacg attcttta
//
LOCUS       DAWKJW010000068         8932 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.068, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000068 DAWKJW010000000
VERSION     DAWKJW010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8932)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8932)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8932
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.068"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(267..479)
                     /locus_tag="WJJ54_001122"
     CDS             complement(267..479)
                     /locus_tag="WJJ54_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7341999.1"
                     /translation="MELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPD
                     TETRRADMPLEKWRQFLDWIEKTNAV"
     gene            complement(491..772)
                     /locus_tag="WJJ54_001123"
     CDS             complement(491..772)
                     /locus_tag="WJJ54_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342000.1"
                     /translation="MNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDGEC
                     PGRHYRHSENGITLYDFIFFDGKPADEARFAAILTETCRRAVKKICETK"
     gene            complement(810..1073)
                     /locus_tag="WJJ54_001124"
     CDS             complement(810..1073)
                     /locus_tag="WJJ54_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342001.1"
                     /translation="MADILPSDKRRQPPKTKGNPMNIIEQETKRAELRKIDAEIAKII
                     ADAHKINAESVKIAQESRWYPMIAATGLVTAIAAVLALIFKFA"
     gene            complement(1083..1717)
                     /locus_tag="WJJ54_001125"
                     /pseudo
     CDS             complement(1083..1717)
                     /locus_tag="WJJ54_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201038.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
     gene            1696..2007
                     /locus_tag="WJJ54_001126"
     CDS             1696..2007
                     /locus_tag="WJJ54_001126"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342002.1"
                     /translation="MTSPVSPSIRAASIFPLARSISTACRTDINRLPLRLIASTKTAE
                     INLASSGLSSVLPASLRRLRVGLTLTASSLRYSVARLMPNSCACCLRYAERAPRPIAS
                     A"
     gene            complement(2029..2286)
                     /locus_tag="WJJ54_001127"
                     /pseudo
     CDS             complement(2029..2286)
                     /locus_tag="WJJ54_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237890.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2610..2804
                     /locus_tag="WJJ54_001128"
     CDS             2610..2804
                     /locus_tag="WJJ54_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7342003.1"
                     /translation="MNNYYLYRNCSSDVLWVKRIQRQIDGSLLLISDNSTYPPMPLAL
                     AEHPDIQIIGQVVQVSKDLN"
     gene            2828..3388
                     /locus_tag="WJJ54_001129"
     CDS             2828..3388
                     /locus_tag="WJJ54_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342004.1"
                     /translation="MKILALLIAATCALSACGGQAEEQPASAQPQEQAQSELKTMPVS
                     YTDYQSVANKGLADQKTGLTLPEHVVPADNAEGKNLLHDFSDGLTLTVDTDKADKITA
                     VRVVWNTDAVPQKAEKLSKAAAALIAATAPGDRTLLRDTGDQIKMAIDSHNAQKEPTR
                     EWARGGIAYKVTVTNLPSVVLTAKAE"
     gene            3529..4587
                     /locus_tag="WJJ54_001130"
     CDS             3529..4587
                     /locus_tag="WJJ54_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342005.1"
                     /translation="MKNKLTLRYFKITRCGYWSGSSKEPNHYEDLLKTLTHLETYVKG
                     KTIEETGISRDDKEPSTFLLDICKKNGLWLLAFWNPAAESSSDEIVSLNMKSKLGQVD
                     SSPVTAGNGKTFGFVSYFLIWPEHNFYSTILSPNATLAGRTEFEEYMLNFLWIDPNFI
                     EKTTYEETSTDGIIHTMERTNFKLPLKINGTPVPRFAGKLAKSPSEKEYVISNYDQVT
                     QVHNQCTVKVTSGQSSSGILKKMLPSFFGSTELFAPLKTIRVNHSVSAAFENKSNLKD
                     WIEDWEKNSFDLDKDDCGFKLKNDDKIYWIRGNVIKCELDVNLHKENGIYPAAKILDI
                     IDQRKDYVLNEFKLSDDS"
     gene            4577..5083
                     /locus_tag="WJJ54_001131"
     CDS             4577..5083
                     /locus_tag="WJJ54_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342006.1"
                     /translation="MILRNIFLICSAFMIGVAWYLGANIRFEEQWVLYEALRTTASII
                     FAVVGVWLAIVYPERLKSPFSQTFSSPVYRRGFKQLFSPVISSIFILSIVLLVGLLAP
                     LLKHIEAIIQYIPLCRKISFSLLASLTMWQIYTVLSVLVPLLNILSKNENDCHASNII
                     NKLKGEQN"
     gene            5187..5690
                     /locus_tag="WJJ54_001132"
     CDS             5187..5690
                     /locus_tag="WJJ54_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HEZ7342007.1"
                     /translation="MSTKFNQFINRVLSHEGGYVNHPKDPGGETNWGITKRTAQANGY
                     NGSMRAMTREQAIGIYRKAFWERYRADQMPEAVAFQFFDACVNHGYGNAVRMLQRAAG
                     VADDGIIGEISLKAINSLPENDLLLRFNAERLVFYTKLSTFTSFGKGWVRRVAQNLIH
                     ASADNTD"
     gene            5802..6137
                     /locus_tag="WJJ54_001133"
     CDS             5802..6137
                     /locus_tag="WJJ54_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342008.1"
                     /translation="MLDASPPQERGSRRETRSQKKASQITAFFRWLGGLVSNPATGKI
                     SHTKLWANVAAAAMTWKFVQAADAPEWLWWAYGAMVGGYALIKRGIAAVPQLAEIKKS
                     ANQEGGGND"
     gene            6130..6540
                     /locus_tag="WJJ54_001134"
     CDS             6130..6540
                     /locus_tag="WJJ54_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase"
                     /protein_id="HEZ7342009.1"
                     /translation="MIEFVRAKKRLLWAFVLLLVWTCGYRYAADKAEAEQTALIATYR
                     HSSMVAAEQYALQLKKAQDERQRWYDFSQKQGRKPVKKQYPPQTKKAGYLKTKEELLA
                     ELACLTAEMAALKKPDALIHGKEVRQKERNSSQG"
     gene            6494..7294
                     /locus_tag="WJJ54_001135"
     CDS             6494..7294
                     /locus_tag="WJJ54_001135"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HEZ7342010.1"
                     /translation="MGKKCGRKNATRRRVKAMPSVELLLEIVGLPRGTFYYQLAVQSA
                     EDKYADLKQHIHDIYRRHKGRYGYRRIAAAILHAGTPVNHKKVSRLMAKTGLKAVIRR
                     RKYRSFKGEVGKIAPNILRRCFHAEKPNEKWVTDVTEFNVGGEKIYLSPIMDLFNGEI
                     VSYRIQIRPTFDLAGEILKGAPEKPGSSEKPILHSDQGWQYQMFFYSGLNLNQDKAMK
                     PQTVQIVRQGEATPYWFKFNPLYNNDRIKLKLKGLSLVQYRIQSLKAA"
     gene            complement(7613..7975)
                     /gene="ssrA"
                     /locus_tag="WJJ54_001136"
     tmRNA           complement(7613..7975)
                     /gene="ssrA"
                     /locus_tag="WJJ54_001136"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(8038..8643)
                     /locus_tag="WJJ54_001137"
     CDS             complement(8038..8643)
                     /locus_tag="WJJ54_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEZ7342011.1"
                     /translation="MNTDFQNILKQLGKQAKKEAAEKQEAEKNKQKQEQDFDFSQAVG
                     QVSPLKNRQQYYAPSDKTPIKVRPKDNRADEENYFYIGSTYNDPPASFSKNGQGKNDI
                     QRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
                     LKNMTRNWLMQHPDVLAYAEPREGNDGCVRILLKRKLRQQD"
BASE COUNT         2240 a         1954 c         2293 g         2445 t
ORIGIN      
        1 gcccgctgcc gcctaaaagg cagcccggat gcctgattat cgggtatccg ggcaggatta
       61 agggggtgtt tgggtaaaat taggcggtat ttggggcgaa aacagccgaa aacctgtgtt
      121 gggatttcgg ttgtcgtgag ggaaaggaat tttgcaaagg tctcagagtg agtttatttt
      181 ggggcggcgg caggtctggg gcaagcggtg tggggcttgg ttgtggtttt taggtttttg
      241 ggggtaaaaa atgccgtctg aacttttcag acggcgtttg ttttttctat ccaatcgagg
      301 aactgccgcc atttttccag cggcatatcg gcccgacggg tttcggtatc gggttcggct
      361 tcccagcggc ctacctgtat gtagtgcttc accccgacga tttgcgccaa ctcggcctgt
      421 gtcagtttgc agcggttgcg aagggtgcgg aggttgtaag gcgtgtagcc gagttccatg
      481 tcgttgcggt ttattttgtt tcgcatattt ttttgactgc cctgcggcag gtttcggtaa
      541 ggatggcggc aaatcgggct tcgtctgccg gtttgccgtc gaaaaaaata aaatcgtaaa
      601 gggtgatgcc gttttcggaa tggcggtaat gcctgcccgg gcattcgccg tctgtctgcc
      661 tgtggatttt ggcaatcagg cggggatagc ggcaatgggt aatgaaacgg cttgcgccgt
      721 cttgcccgat aatccattcg gggtagcggt tgaatagcgc ggctctgttc attttgttcg
      781 tgggataaag ccccttgcgg ggcttgtggt caggcaaatt tgaatatcag tgccaacacg
      841 gcggcgatgg cggtaaccag cccggttgcc gctatcatgg gataccagcg ggactcttgg
      901 gctattttta cggattcggc gttgattttg tgcgcgtcgg caatgatttt ggcgatttcg
      961 gcgtctattt ttcttaactc ggcgcgtttc gtttcttgtt cgattatgtt cattggattt
     1021 cctttcgttt ttggcggttg ccgccgcttg tcggatggca ggatgtctgc catgtgtgta
     1081 cattaatacc ttttaggttt tattgcaagt gttttgggca ggatgccgtc tgaatttttt
     1141 tcaggcggtt ttttgttttg cggggttttg gcggcggctt cgtatgcttg gcggtggcgg
     1201 cggctgtacc attcggcgag ttcgcgccgc tcttggaggc ggtagctgtc ggcggtaggt
     1261 agtggtgcag gcttgagaag ccggcgcgtt ggagggcggc gcggctgatg tggccgaggg
     1321 cgaggtctgt tgtgagggtg tcttttccgg cggtcaggct gatgttggtg aagaggtggc
     1381 ggaatccgtg cattgtgtgt ttggatttgc cgggggtgct gccgtcatag cccagtcgtc
     1441 ggatggcgtt gtgggcgaat ttgatgctga tgtggtcggg atggggggcg ggtttgcgcc
     1501 gtgggcggat gccggggaaa aggtggatgt tgtcgccggt ctgtgtgtgc agctctcgga
     1561 gtatttctac cgcccagtcc gacagtggga cggtaaaggg gtgtttggtc ttcatgtcgg
     1621 cggcggggat gtgccataac cgggcggtga ggtcgatgtc ttgccagcgg gcggaaagca
     1681 gtgcggaggg acgggatgac ttccccggtt tccccatcaa tccgcgccgc ctcgattttt
     1741 ccgttggcgc gcagcatttc caccgcctgc cgcaccgaca tcaaccgctt gccgttgcgc
     1801 ctcatcgcct ccaccaaaac cgccgaaatc aatttggctt cttccggttt aagctccgtc
     1861 ttgcccgcat cgctgcgccg tttgcgcgtc ggcttgacgc tgaccgcctc cagcttgcgg
     1921 tatagcgtgg caaggctgat gcccaattcc tgcgcctgct gcttaagata tgcagagcgt
     1981 gcgccgcgtc ccattgcttc cgcctgattc tcgactgcct taagacgctc aatcattgcc
     2041 ggattcatcg ccttctcccg tttcaccgcc caaccattcc ggcacattgt ctgtcggtgc
     2101 ttcagtcggc agggcatagc tttcgcgcag ttgctcgcag tccaaaataa tttgattgag
     2161 cgtgccgacc atctttgcct gatggctgat ctcgtgtgcc tcactgtgcg cattaagttg
     2221 gtcgaacaaa tctttcaaac ggctcacttg actgcggata ccgacctcaa ggcttgttaa
     2281 ctgcatcatt tatgatttgt taggggtttt agactgctat caaaaatcac agtcctgtcc
     2341 caaccctaaa agccactgtt gctttgtttc agacgacatt tttctatggc atggatcaag
     2401 accaacgttt gaaatcagtc ttgatctaac tggaaagaaa aaagaaacat cctctgcaaa
     2461 gaaatttgtg atgccttgta ttaatttccg tcaccatagg attgaaaaag aaacctactt
     2521 aggaaattgg aatgaacaaa ttgccgcatt ggcagtaaaa caaaatatag attggtgtcc
     2581 aagttttgat attgagaatt ttagacagta tgaataatta ctatctatat aggaattgca
     2641 gcagcgatgt gttatgggtc aaacgtatcc aacgccaaat cgacggcagc ctactcttga
     2701 tttctgacaa ttcaacctat ccacccatgc ccttggcact ggcggaacac cccgatattc
     2761 aaatcatcgg gcaggtagtg caggtatcaa aagacttgaa ctagacacaa tcaaaaaggg
     2821 aaatagaatg aaaatactcg ctttattaat tgccgctacc tgtgctttat ctgcgtgtgg
     2881 cggccaagct gaagaacaac cggcatctgc ccaacctcaa gagcaggcac aatccgaatt
     2941 aaaaaccatg ccggtaagct ataccgacta tcaatcagta gccaataaag ggcttgccga
     3001 ccaaaaaact ggtctgaccc ttccagaaca tgttgttcct gccgacaatg cggaagggaa
     3061 gaatctgctg catgactttt cagacggcct cacattaacc gttgataccg ataaagccga
     3121 caaaattact gccgtccgag tagtttggaa tacagatgca gtgcctcaaa aagcggaaaa
     3181 actgtccaaa gccgccgcag ccttgattgc ggcaaccgcc ccaggagacc gcacactgct
     3241 gcgtgatacc ggcgaccaaa tcaaaatggc aattgacagc cataatgcgc aaaaagagcc
     3301 aacccgagaa tgggcgcgtg gtgggattgc ttataaagtc actgttacta atttgccgag
     3361 cgtggttttg acagcaaaag ctgaataacc tgcattacag ccacaattag gagcagacgg
     3421 agatgatgtt tatagagcct gctgagaata aataactgat aaaaaagctg tctgaaaagg
     3481 tttcggatag ttaggatagc tatctatttt taatatatta gagagaatat gaaaaataaa
     3541 ctgactttac gttatttcaa aataactcgt tgcggttatt ggtctggttc ttcaaaagaa
     3601 cctaatcatt atgaggactt attaaaaact ttaactcatt tagagacata tgttaaaggt
     3661 aaaactattg aagagactgg aattagtcgt gatgataaag agccaagcac tttcttgctc
     3721 gatatctgca aaaaaaatgg tctgtggttg cttgcttttt ggaatcctgc cgcagaaagc
     3781 tcttcagatg aaattgtttc tttaaacatg aaaagtaaac taggtcaagt tgattctagc
     3841 ccagtaacag caggaaatgg gaaaactttt ggcttcgtta gttattttct tatttggcca
     3901 gaacataatt tttactcaac gattctttct cctaatgcaa ctttagctgg acgaacagag
     3961 tttgaagagt acatgcttaa tttcttgtgg attgatccta attttataga aaagactacc
     4021 tacgaagaaa cttcaacaga cggaataatt cataccatgg agcgaactaa ttttaaattg
     4081 cctcttaaaa ttaatggaac tcctgtgcca cgttttgcgg ggaaactagc taaatctcct
     4141 tcagaaaaag agtatgtcat tagtaattat gaccaagtaa cccaagtgca taatcaatgc
     4201 acggtaaagg ttacctctgg acaaagttca agtggaattt tgaagaaaat gttaccaagc
     4261 ttttttggtt caacagaatt gtttgctcca ttaaaaacca ttcgtgtaaa tcattctgtt
     4321 tctgctgcat ttgaaaacaa atcaaatctt aaggattgga ttgaagactg ggaaaaaaat
     4381 tcttttgatt tagataaaga tgattgtggc tttaagttaa aaaacgatga caagatttat
     4441 tggattcgag gaaatgtcat caaatgtgaa ttagacgtca accttcataa ggaaaatggg
     4501 atttatccag ctgctaaaat tctagatata atagaccaaa ggaaagatta cgttttaaac
     4561 gaattcaaat taagtgatga ttcttagaaa tattttccta atatgctctg cattcatgat
     4621 tggtgtagcc tggtatttag gtgctaatat ccgatttgaa gagcaatggg tattgtatga
     4681 agccttgaga acaactgcat caattatttt tgcagttgtt ggggtttggt tggctattgt
     4741 ctatcccgaa cgattaaaaa gcccttttag tcaaactttc tcctctccgg tatatcggcg
     4801 tggattcaaa cagctttttt cccctgttat aagttccatt tttattttaa gtattgtgtt
     4861 acttgttggt ttgttggctc ctttgctcaa acatattgag gcaataattc aatatatccc
     4921 actttgtcgg aaaatctcat ttagcctgtt agcaagcttg acgatgtggc aaatttatac
     4981 ggttttatct gtattagtgc ctttgttaaa tattttaagt aaaaatgaaa atgactgtca
     5041 tgcatccaac attattaaca agctaaaggg tgaacagaat tagctatgtg atttttagtg
     5101 taaactgctt ttaactcgta ttaaaaggcc actcttttaa tacctcctaa aatccctgta
     5161 cctatcaata gatacaggga ttttttatgt ccaccaaatt caaccaattc atcaaccgcg
     5221 tcctctccca cgagggcggt tacgtcaatc atcccaaaga ccccggcggc gaaaccaatt
     5281 ggggcatcac taagcgcacc gcacaggcaa acggctacaa cggctccatg cgcgccatga
     5341 cgcgtgaaca ggctatcggc atttaccgaa aggcgttttg ggagcgttac cgcgccgacc
     5401 aaatgccgga agcggtcgcg ttccaatttt ttgatgcctg cgtcaaccac ggttacggca
     5461 atgccgtccg tatgctgcaa cgcgccgcag gcgtggcgga cgatggaatc atcggcgaaa
     5521 tcagcctcaa agccatcaat tccctccccg aaaacgacct tttattgcgg ttcaacgccg
     5581 agcgtctggt cttttatacc aagctcagta cgttcacctc tttcggcaag ggctgggtac
     5641 gccgtgtggc gcaaaacctg attcacgcgt ctgcagataa cactgattaa agggagacaa
     5701 accatgtcaa aaaagtcact catcgcccta atgaccgcag ccatgcagcc cgatttcagc
     5761 cacagcgacc taggcattcg ctacgccatg ccgactcagg gatgttggac gcaagcccac
     5821 cgcaagagcg gggtagccgc cgcgaaacgc gcagccaaaa aaaagcgtcg caaataactg
     5881 cctttttccg atggctgggc ggcttggtct ctaatccggc cacaggaaaa atcagccata
     5941 ccaaactatg ggcaaacgtc gccgcagccg ccatgacttg gaagttcgtg caggcggcgg
     6001 acgcccccga atggctttgg tgggcatacg gcgcgatggt cggcgggtat gcattaatca
     6061 aacgcggcat cgccgccgta ccgcagttgg cagaaatcaa aaaatccgca aatcaggaag
     6121 ggggcggcaa tgattgaatt tgtccgagcc aaaaaacggc tgctttgggc atttgtgctt
     6181 ttgcttgtgt ggacgtgcgg ttaccgatac gccgccgaca aggccgaagc ggaacaaacc
     6241 gccctgattg ccacctatcg gcattcttct atggttgcgg cggaacaata cgccttgcag
     6301 cttaaaaaag cgcaggacga aaggcagcgg tggtacgact tttcccaaaa acaaggaaga
     6361 aagcccgtga aaaaacagta tccgccgcaa acgaaaaaag ccggctatct gaaaaccaag
     6421 gaagaactgc ttgcggaatt ggcttgcctt acagcggaaa tggctgccct aaaaaagccc
     6481 gatgccttaa tccatgggaa agaagtgcgg cagaaagaac gcaactcgtc gcagggttaa
     6541 ggcaatgcca tccgttgaac tgctgttgga gattgtcgga ctgccacgcg gcacctttta
     6601 ttaccaattg gccgtccaat cggcagaaga caaatatgcc gatttgaaac agcatatcca
     6661 tgatatttat cgacgacata agggaagata cggctaccgg aggattgcag cagccatcct
     6721 tcatgcagga acaccggtca atcacaagaa agtcagccgt ctgatggcga agacggggct
     6781 gaaggcagtg atacggcggc gcaaataccg ctcgttcaaa ggagaagtcg gcaaaattgc
     6841 gccgaatatc ctgcgacgct gtttccatgc agaaaagccg aatgagaaat gggtaacgga
     6901 cgttaccgag ttcaatgtag gcggagaaaa gatatacctt tctccgatta tggatttgtt
     6961 taacggggaa atcgtcagtt accgtattca aatccgcccg actttcgatt tggccggcga
     7021 gatactgaaa ggtgcgccgg agaaaccggg atcgtctgaa aagccgatac tgcattcgga
     7081 tcaaggttgg caatatcaga tgttttttta tagtggatta aatttaaatc aggacaaggc
     7141 gatgaagccg cagacagtac aaatagtacg gcaaggcgag gcaacgccgt actggtttaa
     7201 atttaatcca ctatacaaca acgatagaat caagttgaaa ttaaaagggc tgagccttgt
     7261 tcagtacaga attcagtccc tgaaagccgc ttgattaaac tgtccgactt tttggggtca
     7321 gttcggcttc ggcatttttt tatccgtttg ggggtaactt gtttggaaag ctgcaagctt
     7381 ataaataaag gattacattt aagttttggg taaccttttt aaaaaaatgc gtgatgactt
     7441 ttgcattttt aaggcgtttt ttggggtaat tcgtgaaaag ttaccccaaa agttacccca
     7501 taaatggcga aaactcaagc atacgccagc atattcaagg caacaaaaaa gccttgaaac
     7561 tgttgaagtt caaggctttt ttgtgttgca ggatgctgct gaaaataggg tatggtggag
     7621 gcggggggaa tcgaaccccc gtccgaaagt cctctacaaa gcgttctaca tacttagttg
     7681 tgtctatttg aaaatcttat ttccatcatg ccgaccaaca ggccttttgg aaaccagtta
     7741 ccttaaatct catttcctgc caagtaaccc ggtaggaaac cagtcaatgt aagatgacgt
     7801 tgcggtggct ttcgccacac agcccattga ccgactgctg caacggctgg ccttaagcgg
     7861 ccaaagcgta agtttcgtcg tttgcgacta tttgaattca gtgttttacg ggaatctgag
     7921 accccggtat gcccgcatct gcttcgcaac ccccgtcgaa accaaggtcg cccccagaaa
     7981 tggtttgcaa attatacgga tattgtgcgg tgctgccaag tctgtcggag aaatttgtca
     8041 gtcttgctgc cttaatttgc gtttgagcag gatgcggacg cagccgtcgt tgccttcccg
     8101 gggttcggcg taggcgagta cgtcggggtg ttgcatcagc cagtttcggg tcatattttt
     8161 cagaacgggt ttgtagcctt tggaacctaa tccgctgccg tggatgattt cgccgcatac
     8221 gccgcgtttt tgggtgaatg cgatgaattc gttgaggact ttttgggctt cttcctgtgt
     8281 gtagccgtgc aggtcgacat cggtaacgac gggatagtat ccgtttttca ggcgttggat
     8341 gtcgtttttt ccctgtccgt ttttgctgaa gctggcgggc gggtcgttgt atgtgctgcc
     8401 gatgtagaag tagttttctt cgtcggcgcg gttgtctttg ggacggactt tgatgggggt
     8461 tttgtcggac ggtgcataat attgttgccg gttttttaac ggggagactt gtccgactgc
     8521 ttgtgaaaaa tcgaaatcct gttcttgttt ttgcttgttt ttttcggcct cctgtttttc
     8581 tgccgcttct tttttggcct gtttgcccag ttgtttgagg atgttttgga agtcggtatt
     8641 catatttttt cctgttattt gtccgatggc tgtttcgggc ggggttttaa tttgccggaa
     8701 tgtttgccaa gcgggggagg atgattttgt tgccggcgta tgttttttga aagtgtgatt
     8761 gtatatcaaa aagaaatgcg gcaaccgtcg gcagtgttga ttgccggaaa tgcgggccgg
     8821 tcgaaccgat atgcccgaac gcctgataaa gttttaaaaa cctgccttgc gaagcaggtt
     8881 aatggttttg ccaatcttga attgccggaa acgcgaaaca cggaaatctg at
//
LOCUS       DAWKJW010000069         8668 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.069, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000069 DAWKJW010000000
VERSION     DAWKJW010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8668)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8668)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8668
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.069"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(121..1338)
                     /locus_tag="WJJ54_001138"
     CDS             complement(121..1338)
                     /locus_tag="WJJ54_001138"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEZ7342012.1"
                     /translation="MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMS
                     GETNRLVALAHEMQEHPDPRELDVVLSTGEQVTIGLLAMALKDIGVDAKSYTGWQVAL
                     KTDTAHTKARIESIDDEKMRADLTAGKVVIVAGFQGISSEGNISTLGRGGSDTSAVAL
                     AAALKADECQIYTDVDGVYTTDPRVVPEAHRMDTVTFEEMIELASLGSKVLQIRSVEF
                     AGKYKVRLRVLSSLQDGGNGTLITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPG
                     VAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSERQDSIGAAS
                     IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTSEIKVSVLIDEKYME
                     LATRVLHKAFNLG"
     gene            complement(1540..2268)
                     /gene="rph"
                     /locus_tag="WJJ54_001139"
     CDS             complement(1540..2268)
                     /gene="rph"
                     /locus_tag="WJJ54_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEZ7342013.1"
                     /translation="MPDYIRISRAADSLRDIKITPHFLPHADGSCLIECGNTKVICTA
                     SIDENVPPFLRGKNQGWVTAEYGMLPASTASRMRREASAGKQSGRTQEIQRLIGRSLR
                     AVVDMEKLGERQILIDCDVIQADGGTRTASITGAFVALQIAVGKLVSDGILSENPIRE
                     AVAAVSVGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEDAPFSLDELG
                     KLVALAQKGIGELLQHQQNALSAA"
     gene            complement(2350..2814)
                     /locus_tag="WJJ54_001140"
     CDS             complement(2350..2814)
                     /locus_tag="WJJ54_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEZ7342014.1"
                     /translation="MYKHLVVAVDGSETSINALKHAAELAGVNGARLTLVHVANPAEY
                     MALAPEFLQHESYEAAAIAQGNEVLDAAERTARELGVENTVKHLLVANKGAREMAQDL
                     VDYADENGADLLVLGTHGRTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA"
     gene            3031..3807
                     /locus_tag="WJJ54_001141"
     CDS             3031..3807
                     /locus_tag="WJJ54_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HEZ7342015.1"
                     /translation="MSDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWA
                     VEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFGKAKVTALRERVAQINPECQVF
                     EIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
                     ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKANMRVPCVFSTENITPPQSGAAC
                     STDAAPQGLSCAGYGASMLVTASFGLYCAQAAVEHIADKK"
     gene            3945..4472
                     /locus_tag="WJJ54_001142"
     CDS             3945..4472
                     /locus_tag="WJJ54_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342016.1"
                     /translation="MEFVNNLVIFSFLLLMLIPIFFVVYGIYHKIRYRKICILRTSFI
                     LLVVILCSMYYIYCRYLDQQKVAYYCIDEQCISIVHLYKDYGINSPTYARIYAGKILF
                     RFQVRAKNYAELLMEDDISISKKILGNKFIIYGSLPVIYGNVDNIEVKEATGYIDRAS
                     TDYIVSRNLKFRHLY"
     gene            4643..5497
                     /locus_tag="WJJ54_001143"
     CDS             4643..5497
                     /locus_tag="WJJ54_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HEZ7342017.1"
                     /translation="MPPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSF
                     QGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQIETYQFDLAAEYLLMAAMLIEI
                     KSRLLLPRTETVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
                     IAVEAKLPEVYITDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNKHGIC
                     RFHDLFNPEQGAAYVVVNFISLLELAKEGLVRIVQEVGFGEIRISLNHEGAHSDGISG
                     TRGGRDVF"
     gene            5538..6746
                     /gene="pncB"
                     /locus_tag="WJJ54_001144"
     CDS             5538..6746
                     /gene="pncB"
                     /locus_tag="WJJ54_001144"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEZ7342018.1"
                     /translation="MTGIIHSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNASTVY
                     PLADIKEDLEVELDALCQLRFTHDELGYLRSLRFIKSDFVDYLELFQLQRRFVEIGTD
                     DKDRLNIRIEGPMIQAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAVRLKEI
                     AAAQNPDEPPFLISDFGTRRRYKLAWQEHVIRTLLEAAPSIVRGTSNVFLAKKLGITP
                     IGTMAHEFLQAFQALDVRLRNFQKAALESWVHEYRGDLGVALTDVVGMDAFLRDFDLY
                     FAKLFDGLRHDSGDPYVWGDKAYAHYQKLKIDSRTKMLTFSDGLDIERSWALHQYFKD
                     RFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKTMTNNSTFLAYLRQ
                     VFDVPEPETP"
     gene            6838..8556
                     /gene="argS"
                     /locus_tag="WJJ54_001145"
     CDS             6838..8556
                     /gene="argS"
                     /locus_tag="WJJ54_001145"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEZ7342019.1"
                     /translation="MNLHQTVEHEAAAAFAAAGIADSPIVLQPTKNAEHGDFQINGVM
                     GAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINLRLRPEFLAQNIQTALNDA
                     RFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFMGNTVIRQNHVG
                     NWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQG
                     GDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDDLQAVVDDLVQKGL
                     AVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLY
                     VVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFKTRSGDTVKLVDL
                     LTEAVERATALVKEKNPELGADEAAKIGKTVGIGSIKYADLSKNRTSDYVFDWDAMLS
                     FEGNTAPYLQYAYTRVQSVFRKAGEWDANAPTVLTEPLEKQLAAELLKFENVLQSVAD
                     TAYPHYLAAYLYQIATLFSRFYEACPILKAESASRNSRLQLAKLTGDTLKQGLDLLGI
                     DVLDVM"
BASE COUNT         2103 a         2382 c         2160 g         2023 t
ORIGIN      
        1 atttaatcca ctatattttt tgttccaaag tcaaaatatg ccgtccgaac attcgggcgg
       61 cagacaaaac ggcactgccc gataaaggca gtgccgttgt ccgtttcaaa ccgtgaaaca
      121 tcagcccaaa ttaaaggctt tatgcaatac cctggttgcc agttccatgt atttttcatc
      181 aatcaatacg gaaactttga tttcggaggt ggaaatcatt tggatgttga taccctcttc
      241 ggcgagcgtg cggaagattt tggcggctac accgacgtgc gaacgcatac ccaaaccgac
      301 tgcggagact ttgcatacgg tgtcgtcgcc atcaatagaa gccgcgccga tactgtcttg
      361 gcgttccgac aggatttcca aagtctgctt gtaatcgccg cgcggtacgg taaaggaaaa
      421 atcggttgtg ccttcgctgc cgacattttg gataatcata tcgacttcaa tgttggcatc
      481 ggcaaccgcg cccaaaatct gataggcaac gccgggtttg tcgggtacgc cgcgcacgtt
      541 gatgcgggct tggtttttat cgaatgcgat accggttacg gcagctcttt ccatgttgtc
      601 gtcctcttca aaggtaatta aggtgccatt gccgccgtct tgcaggctgc tcagtacgcg
      661 caggcgcact ttgtattttc cggcgaattc tactgaacgg atttgcaaaa ctttcgaacc
      721 gaggcttgcc agttcgatca tttcttcaaa tgtaaccgta tccatgcggt gcgcttcggg
      781 tacgacgcgg gggtcggttg tgtaaacgcc gtctacgtcg gtatagattt ggcattcgtc
      841 tgctttgagg gctgcggcga gcgcaacggc ggaagtgtcg gaaccgccgc gtccgagcgt
      901 ggaaatatta ccttcactgc tgatgccttg gaagccggca acgatgacga ctttgccggc
      961 ggtaaggtcg gcacgcattt tttcgtcatc aatgctttcg atgcgggctt tggtgtgggc
     1021 ggtatcggtt ttgagggcga cctgccagcc tgtgtagctt ttggcatcca cgccgatgtc
     1081 tttcaatgcc atcgccaaaa ggccgatggt tacttgttcg ccggtggaca aaaccacgtc
     1141 caattcgcgc ggatcggggt gttcctgcat ttcgtgcgcc aacgcgacca ggcggttggt
     1201 ttcaccgctc atggcggata cgacgacgac aatgtcgtgt ccttcggcgc gggctttggc
     1261 gacacgtttg gccacgtttt taatgcgttc gggcgagcct acggatgtgc cgccgtattt
     1321 gtgtacgatt aacgccatgt ttcgtgcttt cttgtgtggg attggtcggg cagcatggtt
     1381 tgctggaaaa gcggctatta ttactatttt ttacatgaag ttcaagaacg gactgcgctt
     1441 tcccgcctgc cgtttgacag cggtcagcga aaaacctgtt ctttcagatt gttgacaaaa
     1501 tgccgtctga acggttttca gacggcatcc ggacgacaat caggcggcgg acaacgcatt
     1561 ttgctggtgt tgcagcagtt cgcctatgcc tttttgcgcc agtgcaacca gtttgcccaa
     1621 ttcgtccaaa ctgaacggcg cgtcttccgc cgtcccctgt atttcgatga tttttcccga
     1681 tgcggtcatg acgatattca catcactgtc gcaaccggag tcttcgggat aatccaaatc
     1741 caaaagcggc acgccgttca ctacgcctac tgacacagcg gcaacggctt cgcggatggg
     1801 gttttcactc aaaatgccgt ctgaaaccag tttgccgacg gcgatttgca gcgcgacaaa
     1861 cgcaccggta atcgaagccg tgcgcgtacc gccgtctgcc tgaatcacat cgcagtcaat
     1921 caagatttgt cgttcgccga gtttttccat atccacgacc gcgcgcagcg aacgcccgat
     1981 aaggcgttgg atttcttgtg tgcgcccgga ctgtttgccc gccgaagctt cgcggcgcat
     2041 ccgggaagca gttgaggcag gcagcatccc gtattccgcc gttacccagc cttggttttt
     2101 accgcgcaga aacggcggga cgttttcatc tatggaagcg gtacaaatca ctttggtatt
     2161 gccgcattca ataaggcacg aaccgtcggc gtgcggcagg aaatgagggg tgattttgat
     2221 atcgcgcagg ctgtcggcgg cgcgcgagat gcggatgtaa tcaggcatac tgccctcccg
     2281 ttaaaaacag ataaattaaa aagccttaaa tatgaaaaat cacatttaag gccttcaaac
     2341 tgaaaatttc tacgcctctt cggctttgct gcggataatc aaaagcggca ggtggctttg
     2401 gcgcattacc gtttcggcaa aactgcccat taaaaggtgc atcagcccgg tacgtccgtg
     2461 cgtgcccaac accagcaggt cggcaccgtt ttcatcggca taatcaacca aatcctgcgc
     2521 catttcgcgc gcacccttat tggcaaccag caggtgtttg acggtatttt ccacacccag
     2581 ttcccgggcg gtgcgctcgg cggcatccaa aacctcgtta ccttgtgcaa tggcggctgc
     2641 ctcgtaactc tcgtgttgca aaaattcggg ggcgagcgcc atatattcgg caggattggc
     2701 aacgtgtacc aaagtcagac gcgcaccgtt gaccccggca agctcggcgg catgtttcag
     2761 ggcattgatg gacgtttcac tgccgtcaac ggcaacaacc agatgtttgt acatatcgta
     2821 ttctcctttt gcaccgcctc gcggtgccct cttgtcggat gggcgcaggg acagtttgcg
     2881 ccgtttcatt atagacccgc cgtcgggctt tatacaacag ccgaacagcc cgaccgcttt
     2941 ccagtataat atgccgcttc cgtgcagtca ggcatttttt gccggctttc gttcactttt
     3001 tgatttgacg caatcttgca ggattcgacc atgtccgaca acgctttgac ctcttcgcga
     3061 cgcttcggcg gcatcgccag actctacgga gactccgcct tggcgcactt ttcacaggca
     3121 cacgtctgcg tagtcggcgt gggcggtgtc ggctcgtggg cggtcgaggc tttggcgcgg
     3181 acgggcatcg gacgtttgac tttgattgat ttggacaacg ttgccgaatc caatgtcaac
     3241 cgccagctgc acgccctgac cggagacttc ggcaaagcaa aagttaccgc cttgcgcgaa
     3301 cgcgtcgccc aaatcaaccc agaatgccaa gtgtttgaaa ttgaagattt cgttaccgaa
     3361 gacaatttgc cggaatactt cggaaaaggt tttgatttcg tcatcgacgc gatcgaccaa
     3421 gtgcgcgtca aagcagcaat ggcggcttat tttgtggaac gcaaacaacc gtttgtcctc
     3481 agcggcggcg cgggcggaca aaaaaatccg gcgttaatcc aaaccgccga tttgagccgc
     3541 gtaacccacg acccgctgct tgccaacctg cgctacacct tgcggaaacg ctacggattc
     3601 agccgcgata cgaaagcaaa tatgcgcgtg ccgtgcgtgt tctcaaccga aaacatcacg
     3661 ccgccgcaat cgggcgcggc gtgttctacc gatgccgcac cgcagggctt gtcgtgcgcc
     3721 ggctacggtg caagcatgct cgttaccgct tcgttcgggc tatattgcgc acaggcggcg
     3781 gtggaacaca tcgcagacaa aaaataagca atgccgtctg aaacaggatt cagacggcat
     3841 ttgaacaaac tatggttatg atttaagaca acaaaggata cggataaaaa ataacataaa
     3901 atatatgatt cctaataata taccaagtat cggagagcta tttaatggaa ttcgttaata
     3961 atttagttat tttttcattt ttattactaa tgcttattcc gatatttttt gtagtatatg
     4021 gtatatacca taagatacgt tatcgcaaaa tatgtatcct aagaacaagt tttatattat
     4081 tagtggtaat actttgcagt atgtattaca tatattgccg ttatcttgac caacaaaaag
     4141 tagcttatta ttgcatagat gaacaatgta tttctattgt tcatctatac aaagattatg
     4201 gtataaactc tcccacatat gcgagaattt acgcaggaaa aatattgttt agatttcaag
     4261 taagagctaa aaattacgct gaattactta tggaagatga tatatcaatt agtaaaaaaa
     4321 ttttggggaa taaatttatc atttatgggt cgctacctgt aatatacggt aatgtagata
     4381 atattgaagt aaaagaagct actggttata tagatagagc cagtactgat tatattgtct
     4441 caagaaactt aaaattcaga catttatatt aattaagagg ttttagcaag accgtattca
     4501 caacctgctc cttttcaaaa catttgcatt taaaagccgt tataatgccg tctgaacatc
     4561 tgcccgacca cattatacgt gaatgtcggc agattgtttt cttttgtaaa cttatattaa
     4621 aatccactta ccgattcacg ccatgccgcc catccctgcc ccatccgcac catccgagca
     4681 cactgtcgca tgggtattcg gccaacccgt taccgatttg ccgcaggatt tgtttatccc
     4741 gcccgacgcg ctgaaagtcg tattgggcag ttttcaaggc cctttggatc tactgctgta
     4801 tctgatccgc aagcagaaca tcgatgttct cgatattccg atggtgaaga ttaccgagca
     4861 gtatctgcac tacatcgccc aaatagaaac ctatcagttt gatttggcgg cggaatatct
     4921 tttgatggca gcaatgctga ttgaaatcaa atcgcgcctg ctgctgccgc gtaccgaaac
     4981 cgtcgaagac gaagaagccg acccgcgtgc cgagttggtg cgccgcctgc tggcttacga
     5041 acagatgaag ctggcggcgc agggtttgga cgcgctgccc cgagccggac gggatttcgc
     5101 gtgggcttac ctgccgctgg aaattgccgt cgaagccaag ctgcccgaag tctatattac
     5161 cgacttgacg caagcgtggc tgggtatttt gtctcgggca aaacatacgc gcagccacga
     5221 agttatcaaa gaaaccatct ccgtgcgcgc gcaaatgacg gcaatcctgc gccgtttgaa
     5281 caaacacggg atatgcaggt ttcacgacct gttcaatccc gaacagggcg cggcttacgt
     5341 ggtcgtcaac ttcatctcac tgttggagct tgccaaagaa ggattggtca gaatcgtgca
     5401 ggaagtcggt ttcggagaaa ttcgaatcag cctcaatcat gagggggcgc attcagacgg
     5461 catttccggc acacggggcg ggcgcgatgt gttctaatac gccccaagcc gccaccaaaa
     5521 atcgggagac acgccatatg accggcatca tacattcgct gcttgacacc gacctctaca
     5581 aattcactat gctgcaagtg gttctgcacc agtttccgca gacgcacagc ctttacgaat
     5641 tccgctgccg caacgcctcg accgtctatc cgcttgccga catcaaagaa gacttggaag
     5701 tcgaactcga cgcgctctgc caactgcgct ttacccatga cgaactcggc tacctccgca
     5761 gcctgcgttt catcaaaagc gactttgtcg attatctcga actcttccag ctccaacgcc
     5821 gctttgtcga aatcggcaca gacgataaag accgtctgaa catccgcatc gaaggtccga
     5881 tgatacaggc gatgtttttt gaaatcttca tcctcgccat tgtcaacgaa ctttacttcc
     5941 gccgcctgga aacccctgca gtcatagaag aaggcgaacg ccggcttcaa gccaaagccg
     6001 tgcgcctcaa agaaatcgcc gccgcacaaa accccgacga accgcccttc ctgatttccg
     6061 acttcggcac gcgccgccgc tacaagctcg cgtggcagga acacgtcatc cgcaccctgc
     6121 tcgaagccgc cccaagcatc gtgcgcggca ccagcaatgt ctttctcgcc aaaaaactcg
     6181 gcatcacccc catcggcacc atggcgcacg agttcctgca ggcattccag gccctcgacg
     6241 tacgcctgcg gaatttccaa aaggccgcgc tcgaaagctg ggtgcacgaa taccggggcg
     6301 atttgggcgt tgccctgacc gacgtggtcg gtatggatgc cttcctgcgc gatttcgacc
     6361 tctatttcgc caaacttttc gacgggctgc gccacgacag cggcgaccct tacgtttggg
     6421 gcgacaaagc ctacgcccac tatcaaaagc tcaaaatcga cagccgcacc aaaatgctga
     6481 ccttctccga cgggctggac atcgaacgct cttgggcatt gcaccaatat ttcaaagacc
     6541 gcttcaaaac cggcttcggc atcggcacca acctcaccaa cgatatgggg catacgccct
     6601 tgaatatcgt cttgaaactg gtcgaatgca acgggcagtc cgtcgccaag ctgtccgact
     6661 ctccgggcaa aaccatgacc aacaacagca ccttcctcgc ctacctgcgc caagtgttcg
     6721 acgtacccga acccgaaacg ccgtaaaccg gcagaaaaag cgcacaattc ctgtttctgc
     6781 cgcataaaat cttttaaaat accgcctgat ttgaatttaa ccgaaagacc gaacttcatg
     6841 aacctacatc aaaccgtcga acacgaagcc gccgccgcct ttgccgccgc aggcatcgcc
     6901 gacagcccta ttgttttgca gccgaccaaa aacgccgaac acggcgattt ccaaatcaac
     6961 ggcgtgatgg gtgcggcgaa aaaagccaaa caaaacccgc gcgagttggc gcaaaaggtc
     7021 gccgacgcat tggcaggcaa cgccgtcatc gaaagcgcgg aagtcgccgg tcccggtttt
     7081 atcaacctgc gcctgcgccc cgaatttctc gcgcaaaaca ttcagacggc cttgaacgac
     7141 gcacgtttcg gcgtggcaaa aaccgacaaa ccgcaaaccg tcgttatcga ctattcttcg
     7201 cccaatctgg cgaaggaaat gcacgtcggc cacctgcgtt ccagcatcat cggcgacagc
     7261 atttcgcgcg tgttagaatt tatgggcaat accgttatcc gtcaaaacca cgtcggcaac
     7321 tggggtacgc agtttggcat gttggtcgct tatttggtcg agcagcaaaa agacaatgcc
     7381 gcgttcgagt tggcggattt ggagcagttt taccgcgccg ccaaagtgcg ctttgacgaa
     7441 gaccctgcct ttgccgacac cgcacgcgaa tacgttgtga agctgcaagg cggcgatgaa
     7501 accgttttgg cattgtggaa acagtttgtc gatatttcgc tctcgcacgc ccaagccgtt
     7561 tacgacacgc tgggcttgaa gctgcgccct gaagacgtgg caggcgaatc gaaatacaac
     7621 gacgatttgc aagccgtggt cgatgatttg gttcaaaaag gcttggcggt cgaagacgac
     7681 ggcgcgaaag tcgtgttctt ggacgagttt aaaaacaaag aaggcgaacc cgccgcattt
     7741 atcgtgcaaa aacaaggcgg cggcttcctt tatgcttcca ccgatttggc gtgtctgcgc
     7801 taccgtgtcg gcacgcttca tgccgaccgc ctgctgtacg tcgtcgacca tcgccaagcc
     7861 ctgcactttg agcaactttt caccacttca cgcaaagccg gctatctgcc ggaaaacgtc
     7921 ggcgcggcat ttgtcggctt cggcacgatg atgggcaaag acggcaaacc gttcaaaacg
     7981 cgcagcggcg acactgtaaa actggttgac ctgctgaccg aagccgtcga gcgcgccacc
     8041 gctttggtga aagaaaaaaa tcccgaattg ggcgcggatg aagccgctaa aatcggcaaa
     8101 accgtcggca tcggctcaat caaatacgcc gatttgagca aaaaccgcac cagcgattat
     8161 gtgttcgact gggacgccat gctctcgttt gaaggcaaca ccgcccccta tctgcaatac
     8221 gcctacaccc gcgtgcaaag cgtgttccgc aaagcaggcg aatgggatgc aaatgcgcca
     8281 accgttttga ccgaaccgct ggaaaaacaa ctggccgctg agctgctgaa atttgaaaac
     8341 gtgctgcaaa gcgtggcgga cacggcgtat ccgcactacc tcgccgccta cctctatcaa
     8401 attgcgaccc tgttcagccg cttctacgaa gcctgtccga tactcaaagc cgaaagcgca
     8461 agccgcaaca gccgcctgca actggcgaag ctgaccggcg acacgctgaa acaaggcttg
     8521 gatttgctgg gcatcgatgt gttggacgta atgtaaaacc gcaccgcccg attgcggaca
     8581 acagccccac catccttatc cgaatctgaa aaaagcggcg cgatacaccg tatccgccgc
     8641 ccctcccaaa atgcgaaaca aacaaacg
//
LOCUS       DAWKJW010000070         8655 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.070, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000070 DAWKJW010000000
VERSION     DAWKJW010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8655
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.070"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            179..1354
                     /locus_tag="WJJ54_001146"
     CDS             179..1354
                     /locus_tag="WJJ54_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEZ7342020.1"
                     /translation="MQNIFDPLVIRGKSLTPIVQGGMGVGVSASGLSSAVARENGIGT
                     IASVDLRHLHEDLLAESQINPSEEKYTSLNCTALDREIQKAKSASEGKGLIAVNVMKA
                     VKDHAAYVRQACESGADAVVMGAGLPLDLPEMTEGYHKDVALLPILSESRGINIVLKR
                     WMKKGILPDAIVVEHPAHAAGHLGASTVEGVNDAKFDFKRVIEETFEVFKSLGLESEK
                     IPLILAGGMANFEKVKTALKNWGASAVQIGTAFAVTEEGDAHLNFKKTLAGAETEKVV
                     EFMSVAGLPARGVRTKFLDSYIKRESKLQTNAKADPRRCTQGLNCLTSCGLRDGLSKA
                     GQFCIDIQLAAAFRGEVDKGLFFRGKDPLPFGNAIRTVRETIQYLLTGSEPVATVGR"
     gene            complement(1414..1962)
                     /locus_tag="WJJ54_001147"
     CDS             complement(1414..1962)
                     /locus_tag="WJJ54_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HEZ7342021.1"
                     /translation="MSQNTPIKPWYKHVWPWILMAGPIFVVIASVAMFFVAQQHATDL
                     VTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISPDMNAAKVFVGGEFDGKQPLNLLL
                     MHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLPPTNHWYVRVEDAAGVWRVENKWI
                     TSQGNAVDLTPMDKLFNNTESK"
     gene            complement(1965..3461)
                     /gene="ccoG"
                     /locus_tag="WJJ54_001148"
     CDS             complement(1965..3461)
                     /gene="ccoG"
                     /locus_tag="WJJ54_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HEZ7342022.1"
                     /translation="MTTENQAGNPESGIGTSEQTKAAPKAKKTFDPRASVIQIHPEGE
                     RIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGV
                     GDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
                     LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFA
                     TAFYGFMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTV
                     NKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLI
                     RYTTESALEHEYSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRKMVEVDILKDR
                     GVLVRENAKGWLENAYSLRIINKSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETV
                     TLPVQVSTIPEYADKGSHPIEFTFQYRESGAPDGKPVVLEEDATFIGE"
     gene            3988..5967
                     /gene="tkt"
                     /locus_tag="WJJ54_001149"
     CDS             3988..5967
                     /gene="tkt"
                     /locus_tag="WJJ54_001149"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEZ7342023.1"
                     /translation="MSQLANAIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNH
                     NPANPKFYNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGY
                     TDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVS
                     HEACSLAGTLGLGKLIVLYDDNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDT
                     AAIQAAIEAARAETGKPSIICCKTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGW
                     TYPAFEIPQEIYDAWNAKEQGAKLEADWNELFAQYQAKYPAEAAEFVRRMDKKLPDNF
                     DEYVQTALKEVCAKAETIATRKASQNSIEILAKELPELVGGSADLTPSNLTDWSNSVS
                     VTRDKGGNYIHYGVREFGMGAIMNGLALHGGVKPFGATFLMFSEYERNALRMAALMKI
                     NPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAVKAAD
                     HPSCLIFSRQNLKFQARSEQQLDDIKRGGYIISEAQGNAQAVIIATGSEVELALEAQK
                     ALAAQNIAVRVVSMPSTNVFDRQDAAYQAAVLPESLPRIAVEAGHADGWYKYVGLNGA
                     VVGINRFGESAPADLLFKAFGFTVDNVVDTVKSVL"
     gene            6108..7496
                     /gene="fumC"
                     /locus_tag="WJJ54_001150"
     CDS             6108..7496
                     /gene="fumC"
                     /locus_tag="WJJ54_001150"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEZ7342024.1"
                     /translation="MNTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLI
                     YALALVKKAAAATNVSLGRIKPEQADLITQAADDVLNGKLDGQFPLVVWQTGSGTQSN
                     MNMNEVLANRANEIAGTGLAAYQPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLI
                     PAVKALRDTLDKKAQAFAPIVKIGRTHLQDATPLTLGQEFSGYVSQLDHGLGRLNDAL
                     KDLYELALGGTAVGTGLNSHPEYAEKAAAKLAELSSLPFVSAPNKFEALGGRDAAVAA
                     SGALKTLAASLNKIANDIRWLASGPRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTM
                     VCCQVFGNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNEHCAIGIEP
                     VPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNNKSLRETAVELGLLTGEEFD
                     ELVVPADMVHPR"
     gene            complement(7561..8484)
                     /locus_tag="WJJ54_001151"
     CDS             complement(7561..8484)
                     /locus_tag="WJJ54_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ7342025.1"
                     /translation="MENQRPHLGFALALLAAMTWGTLPIAVRQVLKFVDAPTLVWVRF
                     TVAAAVLFVLLALGGRLPKRRDFSWCSFRLLLLGVAGISANFVLIAQGLHYISPTTTQ
                     VLWQISPFTMIVVGVLVFKDRMTAAQKIGLVLLLAGLLMFFNDKFGELSGLGAYAKGV
                     LLCAAGSMAWVCYAVAQKLLSAQFGPQQILLLIYAASAAVFLPFAKPAHIGSLDGTLA
                     WVCFAYCCLNTLIGYGSFGEALKHWEASKVSAVTTLLPVFTVIFSLLGHYVMPDTFAA
                     PDMNGLGYAGALVVVGGAVTAAVGDRLFKRR"
BASE COUNT         2171 a         2513 c         2113 g         1858 t
ORIGIN      
        1 cactataata ttttctctcc cgattgaaac aggcgtaaca gaatatgccc gaagctccgg
       61 ctgctttctt gtttaccgcc gcgatattta gagtataata ccaaatttga gcaatagttc
      121 taaaacagtt agaaccattt ttcatgagcc tgactgattc gtatactcgg agaaactgat
      181 gcaaaatatt tttgaccctt tggttattcg tggaaaatcc cttaccccca tcgtgcaagg
      241 cggtatgggg gtcggtgttt ccgcatcggg tttatccagc gcggtggcac gtgaaaacgg
      301 tatcggaacg attgccagtg tggatttgcg ccaccttcac gaagacctac tcgccgaatc
      361 acaaatcaat ccgagtgaag agaaatatac atctttgaac tgtaccgcat tagacaggga
      421 aatccaaaaa gccaaaagcg cttcagaggg aaaaggactg attgcggtca acgtgatgaa
      481 ggcagtcaaa gaccacgccg cgtatgtccg ccaggcttgc gaatcagggg cggatgcggt
      541 cgtgatgggc gcaggtctgc ctttagacct gccggaaatg accgagggct atcataaaga
      601 tgtcgcgctg ctgccgattc tgtccgaatc gcgcggtatt aatatcgtct tgaaacgttg
      661 gatgaaaaaa ggcatattgc ccgatgcgat tgtagtcgaa catcctgccc acgcggccgg
      721 acatttgggt gcatcaaccg ttgaaggcgt aaacgatgcc aagttcgact tcaaacgcgt
      781 gattgaggaa acgtttgaag ttttcaaaag tttagggctg gaaagcgaaa aaatcccgct
      841 tattcttgcg ggaggcatgg caaattttga aaaagtcaaa accgccctaa agaactgggg
      901 agcctctgcc gttcaaatcg gtacggcttt tgccgttacc gaagaaggag atgcacacct
      961 taacttcaaa aaaacgctcg ccggtgcgga aactgaaaaa gtagtcgaat ttatgtctgt
     1021 tgccggtttg ccggcgcgcg gtgtccgcac caaattccta gacagctaca tcaagcgtga
     1081 aagcaaactt cagacaaacg ccaaagccga cccgcgccgc tgtacccaag gtttaaactg
     1141 cctaaccagt tgcggtctgc gcgacgggct ttccaaagcc ggacaattct gcattgatat
     1201 ccagcttgcc gccgcattcc gtggagaagt agataaaggc ctgttcttca gaggtaaaga
     1261 cccgctgccc ttcggcaatg ccatccgcac cgtccgcgag acgatacaat atctgctgac
     1321 ggggagcgaa cctgttgcaa cagtaggacg ctgatgtcaa aacagccgat actgtatcaa
     1381 aatgccgtct gaaaattttc agacggcatc tctttatttg ctttcagtat tattgaaaag
     1441 tttatccatc ggggtcagat ccaccgcatt gccttggctg gtaatccatt tgttctcgac
     1501 gcgccacacg cctgccgcgt cctccacgcg cacataccag tggttggtcg gaggaagggt
     1561 tttgaacacc gcctcatatt ccgccctgcc gttctgcgcg ctgccgacgg gcttgagggc
     1621 gacggtttga tcgtccgcct tgcgggtcgg gtgcatcagc agcaggttca aaggctgttt
     1681 gccgtcaaac tcgccgccga caaacacttt tgccgcattc atatcggggg aaatgagaac
     1741 ctgcaccccg atatgccgtc tgacagcctc ttcatcccga tgaagctgga tgtcgatatg
     1801 tttgccgtct ttataataat cgtccgtaac caaatctgtc gcgtgctgct gtgcgacaaa
     1861 aaacatagcg acgctggcga tgacgacaaa aatcggcccc gccatcaaga tccacggcca
     1921 gacgtgtttg taccaaggtt tgattggagt gttttgagac acggttattc tccgataaag
     1981 gttgcatctt cttccaagac gaccggcttg ccgtcgggcg cgccgctttc gcggtattgg
     2041 aaggtaaatt cgatagggtg gctgcctttg tccgcgtatt ccggaatggt ggacacttgg
     2101 acgggaaggg ttaccgtttc gcgcggggca accttgatac cgccttcggg cagcccggtc
     2161 agggcgattt cgtcaaagcc tttgacactt gcggtaatga gctgttcttt ttcacttttg
     2221 ttgatgatac gcaggctgta tgcgttttcc agccagcctt tggcgttttc gcgcaccagt
     2281 acgccacggt ctttcaaaat atcgacctcg accattttgc gcgtggacaa accggccagg
     2341 aaggcaatga taactaacgc caacaccgcg ccgtaacctg ccacgcgcgg tctgagcagc
     2401 cgttttttaa tgtctttttc agaatattcg tgttccagcg cgctttcggt cgtataacgg
     2461 attaatccgc gcggatagcc cattttgtcc ataatctcat cgcacgcgtc gatacaggcg
     2521 gcgcagccga tacattggta ttgcagaccg ttgcggatgt cgatgccgac ggggcagact
     2581 tggacgcaca tcgcacagtt gatgcagtcg cccaaacccg cctcttcctt attgaccgtt
     2641 ttcttgcgcg cgccgcgcgg ttcgccgcgt tccgcgtcat aagaaacaat cagcgtgtcc
     2701 ttgtcgaaca tcgcgctttg gaaacgtgca tacggacaca tatgcaggca tactttttcg
     2761 cgcataatgt gggcgaagaa gaaggtcata aagccgtaaa acgctgtggc aaacatcgcg
     2821 ccgccgcctg ctgctccagt gaataaatcg ggaacgaact ggcggatagg gacaaaccag
     2881 cctgcaaacg tgatgcccgt ccacgcgcag acaaggaaaa tcagcaggta tttggtggct
     2941 ttgatgcgga ttttagtgaa attccacggc gatttttcca gtttcagccg tttgttccta
     3001 tcgccttcga ccaggttgtc gatccacagc ataatttcgg tgtaaaccgt ttgcgggcag
     3061 gaatagccgc accacagtcg cccggcaatc gtcgtccacc aaaacagccc gaaggcgcaa
     3121 atcatcagca gcaaggcaag gtaaatcaaa tcgcccaccc ccaacgacaa tccgaaaatg
     3181 aagaaatgcc gttcggggat attgaaaacg acagcctgcc tgccgctcca gttgaaccac
     3241 ggaatgacgt aaaacacaaa ctgcgtcgcc aatacggcgg cgatacgcag tttggcgaac
     3301 cgtccttccg cctttttggg atggatgcgt tcgccttcgg gatggatttg aatcacgctg
     3361 gctcgcggat cgaatgtttt tttcgctttc ggcgcggctt ttgtttgttc ggacgtgccg
     3421 attccggatt ccggattgcc ggcttggttt tccgtggtca ttctgcattc cttagatttt
     3481 tgattgatgg tttgcccgtt accgccgccg tttgcttttc agacgtcatt tttcttgttt
     3541 tttaaggcgt tgtgtttcaa gttttgagaa aatccgtttt tcccaaaata tatttccgct
     3601 attgtacaac tttatgcgcc gtccggatgt atggggcgga tacatttccc atccgcatca
     3661 aaacgcctgg attttacctt accgcccgaa caaaatccga atacggttaa aaaaaagact
     3721 aaaaaaaccg acacccccat atcggcagaa ccgacggcgc aagctcataa acaaacgcta
     3781 tcgacaatcc ggcacacaat ctataacttt ttatttcaaa aggaataatg tcaggcttcg
     3841 cccgcaaatc gaaaatcctt ccccgcctgt cccctgccgc cgccttccca cgcgtccgcc
     3901 cttttcttga aagcataagc gaatcgggcg ataatcaacg ccttccgatt atccacttat
     3961 ccgaaacacc agcaaggaaa atacaaaatg tctcaactgg caaacgcaat ccgcttcctc
     4021 tcggccgatg ccgttcaaaa agccaattcc ggccaccccg gcgcgcctat gggtatggcg
     4081 gaaatggcgg aaacattgtg gacgaaattc ctcaatcaca atcccgccaa ccccaaattc
     4141 tacaaccgcg accgcttcgt cctctccaac ggccacgcgt ctatgctgtt gtacagcctg
     4201 ctgcacctga ccggctacaa cctaagcatt gaagacttga aaaacttccg ccaactgcac
     4261 agcaaaaccc ccggccatcc cgaatacggc tacaccgacg gcgtggaaac cacgaccggc
     4321 ccgttggggc aagggattgc caacgcggtg ggtatggcat tggcagaaaa aatccttgcc
     4381 gccgaattta ataaagacgg tttgaacatc gtcgatcatt acacctacgt cttcatgggc
     4441 gacggctgcc tgatggaagg cgtatcgcac gaagcctgtt cgctcgccgg cactttaggc
     4501 ttgggcaaac tgattgtttt gtatgacgat aacaatattt ccattgatgg taaagtggac
     4561 ggctggttta ccgaaaacat cccgcaacgc tttgaaagct acggctggca cgtcgttcct
     4621 aacgtaaacg gtcatgacac cgccgccatt caagccgcca tcgaagccgc acgtgccgaa
     4681 accggcaaac cgtccatcat ctgctgcaaa accttaatcg gcaaaggcag tgccaacaaa
     4741 gaaggcagcc acaaaaccca cggcgcacct ttgggcgcgg acgaaatcga agccacgcgc
     4801 aaacatttgg gctggactta ccccgccttt gaaatcccgc aagaaattta cgatgcgtgg
     4861 aatgccaaag aacaaggcgc gaaactggaa gccgactgga acgaactgtt cgcgcaatat
     4921 caagccaaat atcctgccga agccgcagaa tttgtgcgcc gtatggataa aaagctgccg
     4981 gacaatttcg atgaatacgt tcagacggca ttgaaagaag tgtgcgccaa agccgaaacc
     5041 atcgctaccc gcaaagccag ccaaaacagc atcgaaatct tggcaaaaga gttgcctgaa
     5101 ttggtgggcg gttcggccga cctgaccccg tccaacctga ccgactggtc aaacagcgtc
     5161 tccgttaccc gcgacaaagg cggcaactac atccactacg gcgtgcgcga gttcggtatg
     5221 ggtgcgatta tgaacggtct tgccctgcac ggcggcgtaa aaccctttgg cgcgaccttc
     5281 ctgatgttta gcgaatacga acgcaacgcc ttgcgcatgg cggcactgat gaaaatcaac
     5341 cctgtatttg tgttcaccca cgattccatc ggtttgggcg aagacggccc gacccaccag
     5401 ccgattgagc aaaccgccac cctgcgcctg attccgaaca tggacgtatg gcgtccgtgc
     5461 gacaccgccg aatctctggt ggcttgggca gaagccgtca aagccgccga tcacccgtcc
     5521 tgcctgattt tcagccgtca aaacctgaaa ttccaagcgc gcagcgaaca acaactggac
     5581 gacatcaaac gcggcggcta catcatcagc gaagcccaag gcaacgccca agccgtcatc
     5641 attgccaccg gctcagaagt cgagctggct ttggaagcgc aaaaagccct cgccgcgcaa
     5701 aacatcgccg tgcgcgtcgt ttccatgccg tccaccaacg tattcgaccg ccaagacgcc
     5761 gcctatcaag ccgccgtcct gcccgaaagc ctgccgcgca tcgccgtaga agccggccac
     5821 gccgacggct ggtacaaata tgtcggactg aacggcgcag tcgtcggcat caaccgcttc
     5881 ggcgaatccg cccctgccga cttactcttc aaagcattcg gctttaccgt ggacaatgtg
     5941 gtcgatacag tgaaatcagt gctgtaaccc cactcctaaa caaatgccgt ctgaacgctt
     6001 ttcagacggc atttttttgc cctcccgcct tgatgcttcc tcattccacc aatctccatt
     6061 ataatatttg cgaatcactc ttattcacat ttcaaaagga gaaacgtatg aacactcgca
     6121 ccgaacacga caccatgggc aatgtcgaag tcccgtccga agcctattgg ggcgcgcaga
     6181 cccagcgcag ccgcaacaat ttcaaaatcg gcggcgaaac cctgccgcag ccgctgattt
     6241 atgctttggc gttggtgaaa aaagccgctg ccgcgaccaa tgtttccctc ggcaggatta
     6301 agccggaaca ggcggatttg attacgcagg cggcggatga tgtgttgaac ggcaagctcg
     6361 acggacagtt tcctttagtg gtttggcaga ccggctccgg cacgcagtcc aatatgaaca
     6421 tgaacgaagt gctggcgaac cgcgccaacg aaatcgccgg tacgggtttg gcggcgtatc
     6481 agcccgtcca tcccaacgac catgtgaacc acgcgcaatc gaccaacgac gcattcccga
     6541 ccgccatcca cgttgccgcc gcgattgaaa tcaaccgcca cctcatcccc gccgtaaaag
     6601 ccctgcgcga caccttggac aaaaaagccc aagccttcgc ccctatcgtc aaaatcggcc
     6661 gcacccactt gcaggacgcg acgccgctga ctttaggcca agaattttcc ggctacgttt
     6721 cccagctcga ccacggctta ggccgtctga acgacgcgct taaagacttg tatgaacttg
     6781 ctttgggcgg tacggcggtc ggcacgggtt tgaacagcca tcccgaatac gccgaaaaag
     6841 ccgccgccaa actcgccgaa ttgtccagct tgccgtttgt cagcgcgccg aacaaatttg
     6901 aagccttggg cggacgcgat gccgccgttg ccgcttcggg cgcattgaaa acgctggcgg
     6961 caagcctgaa taaaatcgcc aacgacatcc gctggctggc aagcggcccg cgctgcggtt
     7021 tgggcgaaat caaaatcccc gaaaacgagc cgggttcgtc catcatgccg ggcaaagtca
     7081 acccgaccca atgcgaagcg atgaccatgg tgtgctgcca agtgttcggc aacgacgtta
     7141 ccatcggcat ggcgggcgcg tcgggcaatt tcgagctgaa cgtctatatg cccgttatcg
     7201 cctacaacct cttgcaatcc atccgcctct tgggcgacgc gtgcaacagc ttcaacgaac
     7261 actgcgccat cggcatcgaa cccgtaccgg aaaaaatcga ctatttcctg caccattccc
     7321 tgatgctcgt taccgcgtta aaccgtaaaa tcggttacga aaacgccgcc aaagtcgcca
     7381 aaaccgccta caaaaacaac aaatcgttgc gcgaaaccgc cgttgagttg ggcttgctga
     7441 cgggcgaaga atttgacgaa ctggtcgttc ctgccgatat ggttcatccg cgctaatctt
     7501 tccctcaaat aaaatgccgt ctgaaacctc gttcggacgg cattttccgt tgcctgcgaa
     7561 ctagcggcgt ttgaacagcc tgtcccccac cgccgccgta accgcacccc cgaccacgac
     7621 cagtgcgccg gcataaccca aaccgttcat atccggcgcg gcaaaagtat caggcatcac
     7681 ataatgcccg agcaaagaaa atattacggt aaacacgggg agcaaggttg ttaccgcgct
     7741 gactttggaa gcctcccaat gtttcaacgc ctcgccgaac gagccgtaac cgattaacgt
     7801 attcaagcag caatacgcaa aacaaaccca cgccaacgta ccgtccaaac ttccgatgtg
     7861 tgccggtttg gcaaacggca ggaacacggc ggcacttgcc gcataaatca acagcagaat
     7921 ctgttgcggt ccgaattgcg ccgacagcag cttttgcgcc acggcataac acacccatgc
     7981 catactgcct gccgcacaca gcaacacgcc cttcgcatac gcgcccaaac ccgacaactc
     8041 gccgaattta tcgttaaaaa acataagcaa accggcaagc agcaaaacca agccgatttt
     8101 ctgagcggca gtcatccggt ctttaaacac caacacgccg acaacaatca tcgtaaacgg
     8161 cgaaatctgc cacaaaacct gcgtcgtggt cggcgaaata taatgcagcc cttgggcaat
     8221 cagcacaaag tttgccgaaa tgcccgccac gccgagcagc agcagcctga atgagcacca
     8281 agaaaaatcc cgccgcttcg gcagccgccc gcccaatgcc agcaaaacaa acaataccgc
     8341 cgccgccacg gtaaaacgca cccacaccag cgtcggcgca tcgacaaact tcaatacctg
     8401 ccgcacggca atcggcagcg ttccccacgt catcgccgcc aaaagtgcca acgcgaagcc
     8461 taggtgcggc ctttggtttt ccatcctgat tttcctattt ttaaacaacc gtattgccgg
     8521 acgatgccgg tttgccgcat cgggcaataa tggttcaagc gtttggcgtt taattccaac
     8581 cctttgattt caaacaaacc ggctgaagct cggctattgc ttcgcgctat ttgaaaacac
     8641 cgcctgaatt ttaaa
//
LOCUS       DAWKJW010000071         8568 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.071, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000071 DAWKJW010000000
VERSION     DAWKJW010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8568)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8568)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8568
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.071"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            192..1376
                     /gene="coaBC"
                     /locus_tag="WJJ54_001152"
     CDS             192..1376
                     /gene="coaBC"
                     /locus_tag="WJJ54_001152"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEZ7342026.1"
                     /translation="MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFV
                     SPLTFQALSGNPVLTDTHGSNGSNGMEHINLTRNADVFLIAPASMNTVAKICNGVADN
                     LLTNLAAARKCPLAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACGENGM
                     GRMPEPAELLDLLPDLWTPKILRDKKILITAGATFEAIDPVRGITNISSGKMGVALAR
                     ACRAAGAEVSLIYGQLQTELPFGISNRVQTVSAEDMHRAVHRLIDKQDAFISVAAVSD
                     YKVKNRSTQKFKKDKNAKPLSIELDENPDILASIASLPNPPFCIGFAAETENVMAYAR
                     EKRIKKKIPVIVANDVSIAMGKPTNRITIIGDDGELSFPETSKDEAAMQIVERLAVYL
                     NK"
     gene            complement(1443..3599)
                     /locus_tag="WJJ54_001153"
     CDS             complement(1443..3599)
                     /locus_tag="WJJ54_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEZ7342027.1"
                     /translation="MPASQPSAPYDPLTAEARALLFHTASYLKPEEQAELEKAVAYAF
                     RAHDGQTRKSGEPYITHPIAVATQLALWHMDIQGLCAGVMHDVLEDTGVTKGEMAAVF
                     GNTVAEMVDGLSKLEKLKFEDHAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTL
                     GSMRPDKRRRIARETLEIYAQIANRIGLNNAYQELQDLSFQNLHPNRYETLKKAMDKS
                     RKNRQDVVGKVLRAFGQRLVGANIEAKIKGREKNLYGIHQKMMAKKLRFAEVMDIYGF
                     RVIVNSIPACYAALGALHTLYQPKPGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQ
                     IRTKEMDAVAEGGIAGHWSYKSYSKTVDQAVLHTNRWLKNILDLQASSANAIEFLEHV
                     KVDLFPNEIYILTPKGKILTLPKGATPVDFAYAVHTDIGHKTVAARINNIMMPLRTKL
                     KTGDSVEIITSEHAKPNPAWLNFAVSGRARSAIRQYIKNLNRHDAVVLGESLLQKALS
                     SLLPKDVLLSDGIKEKYLADLNDKQTSFEEVLYNVGMGHTLPVYVAMHIAELAGEHFG
                     SEVRLSSIKVDGQESGHIHFAECCHPVPGDSIRLLLVKGKGMIIHRDSCPTLLKSDPE
                     QQLDADWENMNGQNYRVGLQVQSEDSHGLLALMAQAISDSGADIESVETPSKSQSGTE
                     GFVEFKFLLKVKNLDQLNQIIQNLHSIPYIRKVIRS"
     gene            complement(3691..3897)
                     /locus_tag="WJJ54_001154"
     CDS             complement(3691..3897)
                     /locus_tag="WJJ54_001154"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEZ7342028.1"
                     /translation="MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDVRNN
                     KPTVTALREIAAGHIGTELLTRNK"
     gene            complement(3957..4574)
                     /gene="gmk"
                     /locus_tag="WJJ54_001155"
     CDS             complement(3957..4574)
                     /gene="gmk"
                     /locus_tag="WJJ54_001155"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEZ7342029.1"
                     /translation="MSAYRKGNIFIISAASGTGKTTLVSRLLANHNGLRVSVSHTTRP
                     PREGEVNGVHYHFVSKEEFESLIAQEAFLEYADVFGNYYGTSAEGVNALAAAGYDVIL
                     EIDVQGAAQVRNALPEAVGIFILPPSFDVLAARLNGRGTDSREVIQRRLSKARHEIEQ
                     SVLFDFVVVNDDLARAEEDLRHIVNACRLKRSRQLGFIADLLENS"
     gene            4702..5301
                     /locus_tag="WJJ54_001156"
     CDS             4702..5301
                     /locus_tag="WJJ54_001156"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEZ7342030.1"
                     /translation="MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDI
                     TPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYHLNVGFVPIRKKG
                     KLPFETVSQSYALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGG
                     EIVEAAAILEFTDLQGGKNIRASGAPLFTLLQNEGCMKG"
     gene            complement(5347..6135)
                     /locus_tag="WJJ54_001157"
     CDS             complement(5347..6135)
                     /locus_tag="WJJ54_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEZ7342031.1"
                     /translation="MNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALAT
                     GRSLATIPEKVRDMMAETGMDAVVTINGQFALLHGKTVREVPMDAGLMGRVCAHLDSL
                     GMDYAFVGGEGIAVSALSECVCRALQHIASDFFADKDYFSSKPVYQMLVFAEENEMPL
                     WSDIVEQEGLKTVRWHEEAVDLLPAGASKMDGIRSVVEALGLEMADVMAFGDGLNDVE
                     MLSEVGFGVAMGNGEQAAKEAAKYVCPGVDEDGVLRGLQDLGVI"
     gene            6460..7815
                     /gene="yegQ"
                     /locus_tag="WJJ54_001158"
     CDS             6460..7815
                     /gene="yegQ"
                     /locus_tag="WJJ54_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HEZ7342032.1"
                     /translation="MKAPELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFA
                     KLNVLEQGIKEAHERNKKFFLTVNTLPHNSKLKTFVSDMEPLIAMKPDALIMADPGLI
                     MTVREKWPEMPIHLSVQANTTNYWGVKFWQNIGVERIILSRELSMEEIAEIRQQCPDI
                     ELEVFIHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVHNATESDAGDAQLL
                     QGFNFEKAQEEANQNFEGINGQKRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNS
                     KDLRGIEVVEKLAKIGVDSLKVEGRTKSLYYVARVAQSYRKAIDDAVAGRPFDYSLLS
                     ELEGLANRGYTSGFLERHQTQDYQNYLSGHSTAKQSQYVGHVTEIDKNGWATIEVKNR
                     FAVGDSLEIIHPGGNQTIKLEQMTRKGQPVDVAPGNGIQVKIPDMQGKEKALIARVLN
                     P"
     gene            7949..8425
                     /locus_tag="WJJ54_001159"
     CDS             7949..8425
                     /locus_tag="WJJ54_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
                     /protein_id="HEZ7342033.1"
                     /translation="MLAVCQSGSAPKNAHTASAGTPAGESCKVIRDDTAGSGKNIIYR
                     CSNGQAAINAAIADGVLESGIPVSFGGGGVPVANGRNLVTRQAANGVGKSDSEACEHA
                     LINAARKFQQTAGKLGGRSVTGFHSYFDKQPLQGGQYDCQAGSFHVRVVMRANVVR"
BASE COUNT         2162 a         2364 c         2018 g         2024 t
ORIGIN      
        1 attttcgcca aacgctgcac cacctccaac aatcccttcc tccccctcct ctgactagtg
       61 cgcctttgtg aatatgccgt ctgaaactcg gggactcaga cggcattttg tatccaaaac
      121 ggtaactaat gtatccgtac tttgttatag aatggctgct gtttttttct tcgtaattag
      181 aaattgtcaa aatgggtaaa catattcttt taggtgtaac gggcagtatt gcggcgtata
      241 agtcttgcga gttggtgcga ctgctgaaaa aacaggggca ttcggttacg gtggttatga
      301 gccgctcggc aactgaattt gtttctccgc tgacttttca ggctttgagc ggcaatcccg
      361 ttctgaccga cacgcacggc agcaacggtt caaacggcat ggaacatatc aacctgaccc
      421 ggaatgcgga tgtttttctg attgcgccgg caagtatgaa taccgtggca aaaatctgta
      481 acggcgtggc agataatcta ctgaccaatc tggcagccgc acggaaatgt cctcttgcca
      541 tcgctcccgc gatgaatgtg gaaatgtggc tcaaccctgc caaccaacgg aatatcgcac
      601 aactggtttc agacggcatt actgtctata tgccgggctt gggcgaacag gcttgcggag
      661 aaaatggtat gggaaggatg ccggaacctg ccgaattgct ggatttgctt ccagacttgt
      721 ggacaccgaa aattttaagg gacaagaaaa tcttgattac cgcaggtgcg acatttgaag
      781 ccattgaccc tgtcaggggc atcacaaata tttccagcgg gaaaatgggc gtagctttgg
      841 cgcgggcgtg tcgtgccgcc ggtgcggaag tcagcctgat ttacgggcaa cttcaaaccg
      901 aactgccttt cggtatatcc aatagggttc aaaccgtcag tgctgaagat atgcatcgtg
      961 cagtgcatcg tttaatcgac aaacaagatg cttttatttc tgttgccgcc gtctcagact
     1021 ataaggttaa aaacaggagt acgcaaaaat tcaaaaaaga taaaaatgcc aaaccattat
     1081 ccatcgaatt ggatgagaac cccgatattt tggcttctat tgcctcattg ccgaacccgc
     1141 cgttctgcat cggttttgcc gctgaaacgg agaatgtaat ggcatatgcg cgagaaaaac
     1201 gtattaagaa aaaaataccg gtgatagttg ccaatgatgt ttcaatcgcg atgggcaaac
     1261 cgaccaaccg gattaccatt atcggggacg acggggaact atcttttccc gaaacaagta
     1321 aagatgaagc ggcgatgcag attgttgaaa ggcttgccgt atatttgaac aaataagcaa
     1381 ttgaacggat aaaccataaa acgggttgcc tgttaatcaa aaggcaaccc gttttacctg
     1441 cttcaacttc tgatgacttt gcggatatat ggaatactat gcagattttg aataatctga
     1501 ttcaactgat ccaaattctt gactttcaat aagaatttga attcgacaaa accttccgtt
     1561 cccgactggg atttagacgg tgtttcgacc gactcgatgt ccgcaccgga atcggaaatc
     1621 gcttgcgcca ttaatgccaa caggccgtgg ctgtcttccg attggacttg aagcccgaca
     1681 cggtagttct gcccattcat attttcccag tctgcatcca gctgctgttc gggatcggac
     1741 ttcaacaacg tcgggcagct atccctatgg ataatcatgc cttttccctt aaccaacagc
     1801 aaacggatgg aatcgccggg aacagggtgg cagcactctg caaaatgaat atgcccgctt
     1861 tcctgaccat cgactttaat ggaactgagc ctgacctcgc tgccgaaatg ctcccctgcc
     1921 aactcagcaa tgtgcatggc gacataaaca ggcagggtat gccccatccc tacgttgtac
     1981 agcacttctt caaacgatgt ctgcttgtcg ttgagatcgg caagatattt ttccttgatg
     2041 ccgtctgaaa gcaggacatc tttgggcagc aaactggaca gggctttttg taagaggctc
     2101 tctcccaaaa cgaccgcatc gtgccggtta aggtttttaa tatattggcg tatggcactg
     2161 cgcgccctgc ctgacacggc gaaattcaac cacgcgggat tgggtttggc gtgttcggat
     2221 gtgataattt caacagaatc accggttttg agcttcgtac gcaacggcat catgatattg
     2281 ttgatacgtg cggcaacggt tttgtgcccg atatcggtat gcaccgcata agcaaaatcg
     2341 acaggcgttg cccctttggg caaagttagg atttttcctt ttggcgtaag gatgtagatt
     2401 tcgttcggaa acaaatcgac tttgacgtgt tcgagaaact caatggcatt ggcactgctt
     2461 gcctgcaaat ctaagatatt tttcagccac cggtttgtgt gaagcaccgc ctgatcgacc
     2521 gtcttagaat atgatttata gctccaatgt ccggcgattc caccttcggc aacagcatcc
     2581 atttccttgg tacgtatctg aacttcaatc ggcaagccgt aaggaccgac caaagtcgta
     2641 tgcagacttt gatacccgtt gcttttcgga atggcgatat agtctttgaa ccgcccgggc
     2701 ttgggctgat agagggtgtg caatgcgccg agtgcggcat aacaggctgg aatgctgttg
     2761 acaatgacgc ggaaaccgta aatatccata acctcggcaa agcgcagctt tttcgccatc
     2821 attttctgat ggatgccgta caggtttttt tccctgcctt tgattttggc ctctatattc
     2881 gcgcctacca gccgctggcc gaatgcgcgc aagactttgc cgacaacgtc ctgccggttc
     2941 ttccggctct tgtccatcgc tttttttaaa gtctcgtagc ggttgggatg caggttttgg
     3001 aacgataaat cctgaagctc ttgatatgcg ttattcaaac ctatacggtt ggcaatctgt
     3061 gcatagattt caagggtttc ccttgcaatc cggcggcgtt tgtccgggcg catcgaaccg
     3121 agcgtccgca tattatgcag acggtcggca agtttaacga caatcacgcg cacatctttg
     3181 gtcatcgcca aaatcagttt gcggaaactc tccgcctgat gttccgcatg atcttcaaat
     3241 ttgagttttt cgagtttgga cagcccgtcc accatctcgg caaccgtatt gccgaacacc
     3301 gccgccattt ccccttttgt cacgcccgta tcttccaata cgtcgtgcat cacgcctgca
     3361 caaagaccct gtatgtccat atgccaaagg gcgagctgcg tcgcaacggc aatcggatgc
     3421 gtgatgtagg gctccccgct tttgcgggtt tgcccgtcgt gggcgcgaaa cgcataggcg
     3481 acagcttttt caagctccgc ctgttcctcg ggcttgaggt aggaggcggt atggaaaagc
     3541 agggcacgcg cttcggcggt cagggggtcg taaggggcgg aaggttggga ggcgggcatt
     3601 tcagacggct ttcggtatgt atgtgttttt catttcaaac cgtcggactg cacggcggca
     3661 gaatgtgccg acgtgcgttt ccggcagaat ttatttattg cgcgtcaaca gttccgtacc
     3721 gatatgccca gcggcgattt cccttaaagc ggtaacagtc ggtttgttat tgcggacatc
     3781 gtccacaagc ggcgtattgc cattttcaag ctggcgggcc cgacgggccg ctaccaatgt
     3841 caggtcaaaa tggttggaaa tttttccggt acagtcttcg gtggtaatac gtgccatatt
     3901 atttgctttc tttcaaaaat atttaaattg ggaaaccggg tattttcgcg gtttttttag
     3961 gaattttcca acaaatctgc aataaatccc agttgccgcg accttttcag acggcaggca
     4021 ttcacaatat ggcgcaaatc ctcctccgcc cgcgccaagt catcattgac cacgacaaaa
     4081 tcgaacaata cggactgttc gatttcatgc cttgccttcg acagcctcct ttggataact
     4141 tcccgactgt ccgtcccgcg tccgttcaga cgtgcagcaa gcacatcgaa agacggcggc
     4201 aggataaaga tgccgacggc ttccggcagc gcgttgcgaa cctgcgccgc gccctgaacg
     4261 tcgatttcca aaattacgtc atagcctgcc gccgccaaag cattcacgcc ctccgcgctt
     4321 gtgccgtaat agttgccgaa cacgtctgcg tattccaaaa aagcttcctg cgcgataagc
     4381 gactcaaact cttctttgga aacaaaatga taatgtacgc cgtttacttc gccttcacgc
     4441 ggcggacgcg tcgtgtgcga tacggaaacg cgcaaaccgt tatggtttgc caacagccgc
     4501 gacaccagcg tggttttgcc cgtgccggaa gcggccgaaa tgataaagat gttgcctttt
     4561 cgataagcgg acatattttt tacctgtata ttttccagcc gattgtatca caacggacac
     4621 ccggtttcct atttgccgat gcccatattt tgccgctatt gttttgattg atttggcaag
     4681 cggcaggctg acggctacaa tatggcgtta aaaacatcaa acttggaaca cgcaatgctg
     4741 gttcatcccg aagctatgag tgtcggcgcg cttgccgaca aaatccgcaa aatcgaaaac
     4801 tggccgcaaa aaggcatctt attccacgac atcacgcccg tcctgcaaag cgcggaatac
     4861 ttccgacttt tggttgattt attggtttac cgctatatgg atcagaaaat cgacatcgtt
     4921 gccggtttgg acgcgcgcgg cttcattatc ggcgcggcac tcgcctacca tctcaacgtc
     4981 ggttttgtcc ccatccgcaa aaaaggcaag ctgccttttg aaaccgtatc gcaaagctac
     5041 gcgctcgaat acggggaagc tgcggtggaa atccacaccg atgccgtcaa acccggttcg
     5101 cgcgtgctgc tggtcgatga tttggttgcc acgggcggca cgatgcttgc cggactggag
     5161 ctgatccgca aactcggcgg ggaaattgtc gaagccgccg ccattttgga atttaccgac
     5221 cttcaaggcg gcaagaatat ccgtgcaagc ggcgcgccct tatttaccct gcttcaaaac
     5281 gaaggctgta tgaagggctg aaaaccgacc ctgccgtctg aaaccggcag ggttgttatt
     5341 atgcgttcaa atcacgccca aatcttgcaa gcccctcaac acgccgtctt catcaacgcc
     5401 ggggcaaaca tatttcgccg cttctttcgc cgcctgttcc ccgttgccca ttgccacgcc
     5461 gaacccgact tcagacagca tttccacatc gttcaaacca tcgccgaacg ccatcacgtc
     5521 cgccatttcc aaacccaatg cttcaaccac gcttctgata ccgtccattt tcgacgcacc
     5581 cgcaggcagc agatcgaccg cttcctcgtg ccagcgcacc gttttcaagc cttcctgttc
     5641 cacaatatcc gaccagagcg gcatttcgtt ttcctccgca aacaccagca tctgatacac
     5701 cggtttgctt gagaaataat ccttatcggc aaaaaaatcg ctggcgatat gctgcaaggc
     5761 gcggcacacg cattccgaca gcgcggacac ggcgatcccc tctccgccga caaacgcata
     5821 atccataccc aagctatcca aatgcgcgca aaccctgccc atcaaaccgg catccatcgg
     5881 tacttcgcgc acagttttac cgtgcagcag cgcaaactgc ccgtttatcg ttaccacggc
     5941 atccataccc gtttccgcca tcatgtccct gaccttttcg ggtatcgtcg ccaaagaccg
     6001 ccccgttgcc aacgccgtca atatgccttt gccgcgcaaa gccgccaccg ccgttttcac
     6061 ggaaggacgc aaggtatccg tatatttgcg gtacagcgta tcgtcaatat cgaaaaacac
     6121 gattttggga ttcatcatat tctctctcgc actcaaactg ccgcattgta tcccaatcag
     6181 gcaaatactt gataaatcct tataaatttc ccggcaaaat tgaccgcgaa cacgaaaagg
     6241 cggataatcc gcccatcctc aaaccctttt cagacggcat ttgcagcaat gccgtctgaa
     6301 acatttttac aaagcacaca aatcatgttt caacacacag gacgacacat aaagcgtcgc
     6361 cctatatgtt gccctgattc ggaaagggtt acacccctcc caaataaagt ctgattctac
     6421 cgccctaaag ggcggggttt caaccgaaaa ggaaacacga tgaaagcacc cgaactctta
     6481 ttgcccgccg gcggattgga aagaatgcgc gccgcctacg attacggcgc agatgccgtt
     6541 tacgccggca gcccgcgtta ctccctgcgc gcccgcaaca acgaatttgc caaactcaac
     6601 gtccttgagc aaggcattaa agaagcgcac gagcgcaaca aaaaattctt ccttaccgtc
     6661 aacaccctgc cgcacaactc caaactcaaa acctttgttt ccgatatgga acccttgatt
     6721 gccatgaaac ccgacgcgct gattatggcg gatccgggtt tgatcatgac cgtgcgcgaa
     6781 aaatggccgg aaatgccgat ccacctgtcc gtacaagcca acaccaccaa ctactggggc
     6841 gtgaaattct ggcagaatat cggcgtcgaa cgcatcatcc tgtcgcgcga attgagtatg
     6901 gaagaaatcg ccgaaatccg ccaacaatgc cccgacatcg aactcgaagt cttcattcac
     6961 ggcgcattgt gcatcgccta ctccggccgt tgcctactct ccggctactt caaccaccgc
     7021 gaccccaacc aaggcacctg caccaactcc tgccgttggg actacaaagt ccacaacgcc
     7081 acggaaagcg atgcaggcga tgcccaactt ctgcaaggtt ttaactttga aaaagcccaa
     7141 gaagaagcca accaaaactt tgaaggcatc aatggtcaaa aacgccatcc ctacgccgac
     7201 aaagttttcc tgattgaaga gtccaaccgc ccgggcgaaa tgatgccgat tatggaagac
     7261 gaacacggca cctacatcat gaactccaaa gacctgcgcg gcattgaagt ggttgagaaa
     7321 ctcgccaaaa tcggcgtgga cagcctcaaa gtcgaaggcc gcaccaagtc gctttattat
     7381 gttgcacgtg tcgcccagtc ctaccgcaaa gcgattgatg atgccgttgc aggccgtccg
     7441 tttgattaca gcctgttgag cgaactcgaa ggccttgcca accgcggcta caccagcggc
     7501 ttcctcgaac gccaccaaac ccaagactat caaaactacc tcagcggcca ttccaccgcc
     7561 aaacaaagcc aatacgtcgg acacgttacc gaaatcgaca aaaacggctg ggcgaccatc
     7621 gaagttaaaa accgcttcgc cgtcggcgat tcactcgaaa tcatccaccc gggcggcaac
     7681 caaaccatca aattggaaca aatgacccgc aaaggccaac ctgtcgatgt tgccccgggc
     7741 aacggcattc aggtcaaaat ccccgatatg cagggcaaag aaaaagccct catcgcacgc
     7801 gtattgaacc cctaagccac gatgccgtcc gaaccccgtt ttcagacggc attttgttga
     7861 atcttacggt acaatggcaa tgatttccca ccgcaagcaa ggatatccga catgaaaaaa
     7921 aatcctcata ctctccgccg ccgccctgat gctggcagtc tgccaatccg gcagcgcacc
     7981 taaaaacgcg cacacggcat ccgccggcac accggccgga gaatcatgca aagtcatccg
     8041 ggacgacacc gcaggaagcg gcaaaaacat catttaccgt tgcagcaacg gtcaggcggc
     8101 aataaatgca gccattgcag acggcgtatt ggaatctggg attcccgtca gcttcggcgg
     8161 cgggggcgta ccggttgcaa acggcaggaa tctggttaca cggcaagcag caaacggcgt
     8221 tggcaaatcc gactccgagg cctgcgaaca cgccctaatc aatgccgccc gcaaattcca
     8281 gcagaccgcc ggcaaactcg gcgggcgcag tgttaccggc ttccacagct actttgacaa
     8341 gcagccgctg caaggcggac aatacgactg tcaggcaggt tcgttccacg tccgcgtggt
     8401 catgcgcgcc aatgtcgtcc gttaacatat cggcaatcaa aaaattaggc tgtgttttag
     8461 taatctgttg atttcaatta tttgcaaagg aaaagacaat tattttttcg gttaggaaga
     8521 gacctatcct attgaataca tttaagttaa atacgtctat caacacta
//
LOCUS       DAWKJW010000072         8563 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.072, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000072 DAWKJW010000000
VERSION     DAWKJW010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8563)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8563)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8563
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.072"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(78..596)
                     /locus_tag="WJJ54_001160"
     CDS             complement(78..596)
                     /locus_tag="WJJ54_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEZ7342034.1"
                     /translation="MTTHFVVMGVCGCGKTTAALSLQKHLGQCPYAEGDEFHTQANRD
                     KMGAGIPLTDEDRYPWLGNLRDWMTKQAQNGANHTIVTCSALKRGYRDILRGAEGKAA
                     FIHLSPPQDINLERMMSRKGHYMKAGMLDSQLEILEELGEGEYGVKIANPGTPEAVEA
                     DILNWVASENLL"
     gene            complement(616..2001)
                     /locus_tag="WJJ54_001161"
     CDS             complement(616..2001)
                     /locus_tag="WJJ54_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HEZ7342035.1"
                     /translation="MDGWTQTLSAQTLLGISAAAIILILILIVKFRIHALLTLVIVSL
                     LTALATGLPTGSIVNDVLVKNFGGTLGGVALLVGLGAMLGRLVETSGGAQSLADALIR
                     MFGEKRAPFALGVASLIFGFPIFFDAGLIVMLPIVFATARRMKQDVLPFALASIGAFS
                     VMHVFLPPHPGPIAASEFYGANIGQVLILGLPTAFITWYFSGYMLGKVLGCTIHVPVP
                     ELLSGGTQDNDLPKEPAKAGTVVAIMLIPMLLIFLNTGVSALISEKLVSADETWVQTA
                     KIIGSTPIALLISVLVALFVLGRKRGESGSALEKTVDGALAPVCSVILITGAGGMFGG
                     VLRASGIGKALADSMADLGIPVLLGCFLVALALRIAQGSATVALTTAAALMAPAVAAA
                     GFTDWQLACIVLATAAGSVGCSHFNDSGFWLVGRLLDMDVPTTLKTWTVNQTLIALIG
                     FALSALLFAIV"
     gene            2240..3781
                     /locus_tag="WJJ54_001162"
     CDS             2240..3781
                     /locus_tag="WJJ54_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEZ7342036.1"
                     /translation="MDGRRWAVWGAFALLPSAFLAVMVVAPLWAVAAYDGLAWGAVLS
                     DAYMLKRLAWTVFQAAATCVLVLPLGVPVAWVLARLAFPGRTFVLRLLMLPFVMPTLV
                     AGVGVLALFGADGLLWRGRQDTPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTAR
                     TLGAGAWRRFWDIEMPVLRPWLAGGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQL
                     VMFELDMAVASVLVWLVLGVTAAAGLLYAWFGRCAVSDKAVSPVMPSSPQSVGEYVLL
                     AFAAAVLSVCCLFPLLAIVVKAWSAGESWRVLMESETWQAVWNTLRFSAATVYAAAVL
                     GVVYAAAARRSAWMRGLMFLPFMVSPVCVSAGVLLLYPQWTASLPLLLAMYALLAYPF
                     VAKDVLSAWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEF
                     AATLFLSRPEWQTLTTLIYAYLGRAGADNYARAMVLTLLLSAFALGIFLLLDGGEGGK
                     QTETL"
     gene            3810..4409
                     /locus_tag="WJJ54_001163"
     CDS             3810..4409
                     /locus_tag="WJJ54_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEZ7342037.1"
                     /translation="MSELDNILAHNRQFVESGEYEKYFTDKYPERGLAVLSCMDARII
                     GLLPDALGLKNGDAKLIKNAGALVTHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQ
                     GLNAEEFLGRVRESRIPEDRIETLRYAGVDLDGWLTGFDNVEDSVRHTVELIRRHPLM
                     PRHIAVHGLVIHPVTGKLTLVVDGSVSDGMDLSEGMETS"
     gene            4406..5011
                     /gene="nadD"
                     /locus_tag="WJJ54_001164"
     CDS             4406..5011
                     /gene="nadD"
                     /locus_tag="WJJ54_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HEZ7342038.1"
                     /translation="MKKIGLFGGTFDPIHNGHLHIARAFADEIGLDTVVFLPAGGPYH
                     KDAASASAADRLAMVELATAEDARFAVSDCDIVREGATYTFDTVQIFRQQFPSAQLWW
                     LMGSDSLMKLHTWKKWQMLVRETNIAVAMRQGDSLHQTPRELHAWLGKSLQDGSVRIL
                     SAPMHNVSSTEIRRNLASQGVSDGIPPAAARYIREHGLYEK"
     gene            5070..5456
                     /gene="rsfS"
                     /locus_tag="WJJ54_001165"
     CDS             5070..5456
                     /gene="rsfS"
                     /locus_tag="WJJ54_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEZ7342039.1"
                     /translation="MNEQELQDLQKMVGVAVNALEDIKAKDISVLETQDKTSLFARMI
                     IASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDF
                     YDIDTLWGGEKPSFHAGMQKPWHAAD"
     gene            5510..5980
                     /gene="rlmH"
                     /locus_tag="WJJ54_001166"
     CDS             5510..5980
                     /gene="rlmH"
                     /locus_tag="WJJ54_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEZ7342040.1"
                     /translation="MNITVLAVGTKMPRWVDEAVAEYAKRFGRDVAYALKEIKPEKRG
                     AGVNAAQGMAAEEKRILEAIPQGAFLVVLDERGKAPTSVELAEHLKSWQQNGEHVCFV
                     IGGADGMTDRLKQQARIMMRLSSLTLPHGMVRVLLTEQLYRAASILHNHPYHRE"
     gene            6053..6319
                     /locus_tag="WJJ54_001167"
     CDS             6053..6319
                     /locus_tag="WJJ54_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HEZ7342041.1"
                     /translation="MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTR
                     HQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ"
     gene            6476..7159
                     /locus_tag="WJJ54_001168"
     CDS             6476..7159
                     /locus_tag="WJJ54_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HEZ7342042.1"
                     /translation="MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAG
                     FNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQY
                     ALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
                     FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLN
                     ILLSLNGED"
     gene            7283..7795
                     /gene="coaD"
                     /locus_tag="WJJ54_001169"
     CDS             7283..7795
                     /gene="coaD"
                     /locus_tag="WJJ54_001169"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEZ7342043.1"
                     /translation="MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINP
                     DKRSTYTVAERQDMLCDITKMFPNVRTDVFENRFLVHYAREVDAGFIVRGIRSASDYE
                     YERSMRHINSDLAPEISTVFLMPPREIAEVSSTMVKGLVGPEGWTETVKRYVPPAVYQ
                     KMIAEHQHEN"
     gene            7827..8480
                     /locus_tag="WJJ54_001170"
     CDS             7827..8480
                     /locus_tag="WJJ54_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HEZ7342044.1"
                     /translation="MLEILFRHQDFVAINKPGGISVHQDSGETGLARTLAIQLGVERV
                     WLLHRLDKQTSGILLFALNRESASALSGQFAGKSIKKTYLALSDRKPSKKQGWIKGGM
                     EKSRRGMWKLTRNTENIAVTRFHSISIAEKLRLFILEPHTGKTHQLRVAMKSLGSPIL
                     GDSLYGGTESETMFLYAWKIQFAYQNRQIEIVAPLKNEWQTENISHALEEFYMAKAG"
BASE COUNT         1865 a         2265 c         2502 g         1931 t
ORIGIN      
        1 caatgtaatc cattctgttc ccgatgttta tgccgtctga aacccatcct gtgtcgggct
       61 tcagacggca tattgcttca aagcaggttt tccgaggcaa cccagttcag aatatcggct
      121 tcgaccgctt cgggcgtgcc ggggttggcg attttgaccc cgtattcgcc ttcgcccagt
      181 tcctcgagga tttccagttg cgaatcgagc atccctgctt tcatgtaatg tcctttgcgc
      241 gacatcatgc gctcgaggtt gatgtcttgc ggcggactga ggtggatgaa ggcagctttg
      301 ccttcggctc cgcgcagaat gtcgcggtag ccgcgtttga gggcggaaca ggttacgatg
      361 gtgtggttcg caccgttttg cgcctgtttc gtcatccagt cgcgcagatt gcccaaccac
      421 ggatagcggt cttcatcggt cagcggaata cccgcgccca tcttgtcgcg gttggcttgg
      481 gtgtggaact cgtcgccttc ggcataggga cattgaccga ggtgtttctg cagggacagc
      541 gcggcggtgg tcttgccgca gccgcatacg cccataacga caaaatgcgt agtcatttac
      601 tatcctttcc gtctgtcaga cgatggcgaa cagcagtgcg gacaaggcaa agccgatgag
      661 tgcgatgagg gtttggttga ccgtccaggt tttcagcgtg gtcggtacgt ccatgtccaa
      721 gaggcggccg accagccaga agccggagtc gttgaagtgg ctgcaaccga ccgaacctgc
      781 cgccgttgcc aatacgatac aggcgagctg ccagtcggta aagccggcgg cggcaacggc
      841 aggagccatc agcgcggcgg cggtggtcag ggcgacggtt gccgaacctt gcgcgatacg
      901 cagtgccaag gcgacaagga aacagcccaa aaggacggga atgcccaaat ccgccatgct
      961 gtcggcgagt gccttgccga tgccggaagc gcgcaaaacg ccgccgaaca taccgcccgc
     1021 gccggtaatc agaatcacgg aacagacggg ggcgagtgcg ccgtccacgg ttttttccaa
     1081 cgcgctgccg ctttcgccgc gtttgcgtcc caagacaaac agtgcgacca atacggaaat
     1141 cagaagggcg atcggtgtcg aaccgattat ttttgccgtc tgaacccagg tttcgtccgc
     1201 acttacgagt ttttcgctga tgagggccga tacgccggta ttcaggaaaa tcagcagcat
     1261 gggaatcagc atgatggcga cgaccgttcc tgctttggca ggttctttcg gcaggtcgtt
     1321 gtcttgcgtg ccgccgctga gcagttcggg aacgggaaca tggatggtgc accccaacac
     1381 tttgccgagc atatagccgc tgaaatacca tgtgatgaag gcggtcggca gacccaaaat
     1441 caaaacttgg ccgatgttcg cgccgtaaaa ttcggaagcg gcaatcgggc ccggatgggg
     1501 cggcaggaag acgtgcatga cggaaaatgc gccgatggag gcaagcgcga agggcagtac
     1561 gtcctgtttc atgcgccgtg cggtggcgaa cacgatgggc agcatgacga ttagtccggc
     1621 atcgaagaaa atcgggaagc cgaaaatcag cgaggcaacg cccagcgcga acggtgcgcg
     1681 tttttcgccg aacatccgga tcagcgcgtc cgccagcgac tgtgcgccgc cggatgtttc
     1741 gaccagacgt ccgagcatcg cgcccaggcc gaccagaagc gccacgccgc cgagcgtgcc
     1801 gccgaagttt ttgaccagta cgtcgttgac aatgctgcct gtgggcaaac cggttgccaa
     1861 agccgtcagc aggctgacga tgaccagtgt cagcagcgcg tggatgcgga atttgacgat
     1921 taaaatcaga atgaggatga ttgccgccgc cgaaatgccc aacagggttt gcgcggacag
     1981 cgtctgtgtc cagccgtcca tttgtaaagc ctttctctgt aataaaagta caaaattgtc
     2041 aggttttttt aagttgtgcg aaaacgatag cacaaatcgg gcggtaagtt gtttgtctga
     2101 agttatattc ctgtttattt gaacgattta tttcagacgg cgggaggaag gcggatacgg
     2161 tatgtagtcg gattgaaata tacggtatgt ggggcttttg ggtacaatcg caacatcagt
     2221 gtttcaagtg gggaaggcga tggatggacg gcgttgggcg gtatggggtg cttttgccct
     2281 gctgccttcg gcttttttgg cggtaatggt cgttgcgcct ttgtgggcgg tggcggcgta
     2341 tgacggtttg gcgtggggcg cggtgctgtc ggatgcctat atgctcaaac gtttggcgtg
     2401 gacggtgttt caggcggcgg caacctgtgt gctggtgctg cctttgggcg tacctgtcgc
     2461 gtgggtgctg gcgcggctgg cgttcccggg gcggactttc gtgctgcgcc tgctgatgct
     2521 gccgtttgtg atgcccacgt tggtggcggg cgtgggcgtg ctggctctgt tcggggcgga
     2581 cggcctgttg tggcgcggac ggcaggatac gccgtatctg ttgttgtacg gcaatgtgtt
     2641 tttcaacctt cctgtgttgg tcagggcggc gtatcagggg tttgtgcaag tgcctgcggc
     2701 acggcttcag acggcacgga cgttgggcgc gggggcgtgg cggcggtttt gggacattga
     2761 aatgcccgtt ttgcgcccgt ggcttgccgg cggcgtgtgc cttgtctttc tgtattgttt
     2821 ttccgggttc gggctggcat tgctgctggg cggcagccgt tatgccacgg tcgaagtgga
     2881 aatttaccag ttggtcatgt tcgaactcga tatggcggtt gcttcggtgc tggtgtggct
     2941 ggtgttgggg gtaacggcgg cggcagggtt gctgtatgcg tggttcggca ggtgcgcggt
     3001 ttcggataag gcggtttccc ctgtgatgcc gtcgtcgccg cagtcggtcg gggaatatgt
     3061 gctgctggcg tttgcggcgg cggtgttgtc tgtgtgctgc ctgtttcctt tgttggcaat
     3121 tgttgtgaaa gcgtggtcgg ccggcgaatc gtggcgtgtg ttaatggaaa gtgaaacgtg
     3181 gcaggcggtg tggaatactt tgcgcttctc ggcggcgacg gtgtatgcgg cggcggtttt
     3241 gggtgtggtg tatgcggcgg cggcgcggcg gtcggcgtgg atgcgcgggc tgatgttttt
     3301 gccgtttatg gtgtcgccgg tttgtgtttc ggcgggcgtg ctgctgcttt atccgcagtg
     3361 gacggcttcg ttgccgctgc tgctggcgat gtatgcgctg ctggcgtatc cgtttgtggc
     3421 aaaagatgtt ttgtcggctt gggatgcact gccgccggat tacggcaggg cggcggcggg
     3481 tttgggtgca aacggctttc agacggcatg ccgcatcacg ttccccctct tgaaaccggc
     3541 gttgcggcgc ggtctgactt tggcggcggc aacctgcgtg ggcgaatttg cggcaacctt
     3601 gttcctgtcg cgtcccgagt ggcagacgct gacgactttg atttatgcct atttgggacg
     3661 cgcgggtgcg gacaattacg cgcgggcaat ggtgctgaca ttgctgttgt cggcgttcgc
     3721 gctgggcatt ttcctgctgt tggacggcgg cgaaggcgga aaacagacgg aaacgttata
     3781 atgtgaaccc tttttcagag gacggcaaaa tgagcgagtt ggataacatc cttgcccata
     3841 accggcagtt tgtcgagtcg ggcgaatatg aaaaatactt taccgacaaa taccccgaac
     3901 gcgggctggc agttttgtcc tgtatggatg cgcggattat cgggctgctg cccgacgcgt
     3961 tgggtttgaa aaacggcgat gccaagctga ttaaaaatgc cggcgcgctg gttacgcacc
     4021 cgtggggttc ggtgatgcgg agtcttttgg ttgccgtgtt tgaattgaag gtcagagaga
     4081 ttatggtcat cgcccatcac gattgcggta tgcaggggct gaatgccgaa gaatttctcg
     4141 ggcgcgtccg ggaaagccgg attcccgaag accgtatcga aaccctgcgt tatgcaggtg
     4201 tcgacctcga cggctggctg accggtttcg acaacgtcga agacagcgtg cgccatactg
     4261 tcgaactcat ccgccgccat ccgctgatgc cgcgccatat tgccgttcac ggactggtca
     4321 tccatcccgt taccggcaaa ctgacgctgg ttgtggacgg cagtgtttca gacggcatgg
     4381 acttatcgga aggaatggaa acatcatgaa gaaaatcgga ctgttcggcg gcactttcga
     4441 cccgatacac aacgggcatc tccacatcgc ccgcgccttt gccgacgaaa tcggcttgga
     4501 cacggttgtt ttcctgccgg caggcggccc gtatcacaaa gacgctgcct ccgcttccgc
     4561 agccgaccgc cttgccatgg tcgaactggc gacggcagaa gacgcgcgtt ttgccgtcag
     4621 cgattgcgac atcgtccgag aaggtgcaac ctatactttt gataccgtcc aaatcttccg
     4681 ccagcagttc ccatccgcgc aactttggtg gctgatgggc agcgacagcc tgatgaagct
     4741 gcacacatgg aaaaaatggc agatgctcgt gcgcgaaacc aatatcgccg tcgccatgag
     4801 gcagggcgac agcctgcacc aaaccccgcg cgaactgcac gcatggctgg gcaagtccct
     4861 tcaggacggc agcgtccgca tcttgtccgc cccgatgcat aatgtgtcgt caacggaaat
     4921 ccgccgcaac cttgccagcc aaggcgtttc agacggcatc ccgcctgccg ccgcacgcta
     4981 catccgcgaa cacggtttgt atgaaaaata aagtcaaatc agtaagaaac ggctataatg
     5041 ccgtctgaaa acatcccgtt aggaaaataa tgaacgaaca agaactgcaa gacctgcaaa
     5101 aaatggtcgg ggtcgccgtc aacgccctcg aagacatcaa agccaaagac atttccgttc
     5161 tcgaaacgca agacaaaact tcgctgtttg ccagaatgat tatcgccagc ggcgacagta
     5221 cgcgccaagt caaagcactg gccaacaacg ttgccgtcga tttgaaagaa gccggttttg
     5281 aaatcctcag caccgaaggc gacagcggcg aatggacgtt ggttgatgca ggagacctcg
     5341 tcgtccacgt tatgctcccc gccgtgcgcg acttctatga tatcgacacc ctttggggcg
     5401 gcgagaaacc gagtttccac gccggaatgc agaagccgtg gcacgcggca gactgattcc
     5461 cgatgccgtc tgaatgttca gacggcattt tcctgtaagg gagaaagcat tgaacatcac
     5521 cgttttggca gtcggcacca aaatgccgcg ctgggttgat gaggccgtcg ccgaatacgc
     5581 caaacgcttc ggacgcgacg tcgcctacgc actcaaagaa atcaaacccg aaaaacgcgg
     5641 cgcgggcgtg aatgccgccc aaggtatggc ggcggaagaa aaacgcatcc ttgaagccat
     5701 tccgcaaggc gcgttcctcg tcgttcttga cgaacgcggc aaagcaccga cctccgtcga
     5761 gctggcggaa cacctcaaaa gctggcagca aaacggcgaa cacgtctgct tcgtcatcgg
     5821 cggcgcggac ggaatgaccg accgcctcaa acaacaagcc cgtataatga tgcgcctgtc
     5881 cagcctgacc ctgccgcacg ggatggtgcg cgtccttctg accgagcagc tctaccgcgc
     5941 cgcctccatc ctgcacaacc atccctatca tcgggaataa gaaggctttt gtccgtatcc
     6001 ctaatcggtt aaaattaccc cgttatttct gaacacagca aaggaatccg ctatggcacg
     6061 catggtattc tgcgtcaagc tcaacaaaga agccgaaggc atgaaatttc cgccgcttcc
     6121 caacgaattg ggcaagcgca tttttgaaaa cgtatcgcaa gaagcgtggg cggcgtggac
     6181 gcgccaccaa acgatgctga ttaacgaaaa ccgtttaagc ctcgccgatc cgcgcgcgcg
     6241 cgaatacctg gctcagcaga tggagcagta tttcttcggc gacggcgcgg atgccgttca
     6301 gggatacgtt ccgcaataac ggttttccgt tttgaacaca ggctgtccga aactgcttca
     6361 gacggccttt aaaatacgcc ggacaacttt atcttcacgc aaccggacaa attttgacat
     6421 tgggcaatgt taaaatcccc cattattccc aaccgcgctt tcaggagcag atgatatgca
     6481 acacgacgtt tacgactaca ccgcgcatac ggtttctaaa aacaccgtcc tgcagaaaac
     6541 ctaccgcctg ctcggatttt cattcattcc ggctgccgca ggcgcggcac ttgccgccaa
     6601 tgccggtttc aatttttacg ccgccttcgg ttcgcgctgg atagggtttg ccgtcgtgtt
     6661 ggcgtttttc tacggtatga tccacttcat cgagaaaaac cgttacagca ataccggcgt
     6721 taccctgctg atggtattca cattcggtat gggcgtattg atcggccccg tgctgcaata
     6781 cgcgctccat attgccgacg gtgcgaaaat cgtcggcatt gccgccgcga tgaccgccgc
     6841 cgtcttttta acgatgtccg ccttggcgcg ccgaacccgg ctcgatatga acgcgctcgg
     6901 acgcttcctg accgtaggtg cggtcattct gatggtcgcc gtggttgcca atctgttttt
     6961 gggtattccc gcactcgccc tgaccatttc cgccggtttt gtcttgttca gttccttaat
     7021 gattatgtgg caggtacgca ccgtcatcga cggcggcgaa gacagccaca tcagcgcggc
     7081 actgacactg tttatctcgc tttacaacat cttcagcagc ctgctgaaca tcctgttgtc
     7141 tttaaacggc gaggattgat gtcggtaaaa cgccgtccga ctatgccgtc tgaaaatgct
     7201 tcagacggca ttttactttg ggcatacaat acggatgcac acgcaccaac acacagccga
     7261 ctatgaagcc gggaggaatc aaatgttacc gaatacaccg cgccgcgccg tttatgccgg
     7321 cagtttcgat ccgcccacat tggggcatct gtggatgata cggcaggcgc aatctatgtt
     7381 tgacgaactc atcgtcgcca tcggcattaa ccccgacaaa cgcagcacct ataccgtcgc
     7441 tgaaaggcag gatatgttgt gcgatattac taaaatgttt cccaacgtca gaaccgatgt
     7501 atttgaaaac cgatttctgg tgcattacgc ccgtgaggta gatgcaggat tcatcgtgcg
     7561 cggcatccgt tctgcttcgg attacgaata cgaacgttcc atgcgccata tcaacagcga
     7621 cctcgccccc gaaatatcca ccgtattcct catgccgccg cgcgaaatcg ccgaagtgtc
     7681 gtccactatg gtcaaaggtt tggtcgggcc ggaaggctgg acggaaaccg tcaaaagata
     7741 tgtgccgccg gccgtgtacc aaaaaatgat tgcagaacat caacacgaaa attgaaccct
     7801 tctatttttg caaggcatat atggatatgt tggaaatttt gttccgccat caagacttcg
     7861 tcgccatcaa caaaccgggc ggcatatccg tccaccaaga cagcggcgag accggactgg
     7921 cccgaacact cgccatacag ttgggcgtag agcgtgtgtg gctgctgcac cgattggaca
     7981 aacagaccag cggcatttta ctgtttgccc tcaacagaga aagcgcgtcc gcccttagcg
     8041 gacagtttgc cggcaaaagc atcaaaaaaa cctatttggc actatccgac cgcaaaccgt
     8101 ccaaaaagca gggttggatt aaaggcggaa tggaaaaatc cagacgcgga atgtggaagt
     8161 tgacgcgcaa tacagaaaat atcgccgtta cccgattcca cagcatcagt atcgccgaaa
     8221 aactgcggct gttcatcctg gaaccgcata cgggcaaaac gcaccaattg agagtggcga
     8281 tgaaaagttt gggcagtccg attctgggtg acagcttata cggcggaaca gaatccgaaa
     8341 ccatgtttct gtatgcatgg aaaatacaat ttgcctacca aaaccgacaa atcgaaattg
     8401 ttgcaccctt aaaaaacgaa tggcagactg aaaatatctc tcatgcgctg gaagaatttt
     8461 atatggcaaa agcaggttaa taaatataaa ttaatttata aacaatatga taaatatttt
     8521 tataaaaatt tttcaagaaa acggttgact gcaaatctct tca
//
LOCUS       DAWKJW010000073         8522 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.073, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000073 DAWKJW010000000
VERSION     DAWKJW010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8522)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8522)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8522
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.073"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(27..422)
                     /locus_tag="WJJ54_001171"
     CDS             complement(27..422)
                     /locus_tag="WJJ54_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342045.1"
                     /translation="MMYSFEANANAVKISETVSVDTGQGAKIHKFVPKNSKTYSSDLI
                     KTVDLTHIPTGAKARINAKITASVSRAGVLAGGGKLARLGAKFSTRAVPYVGTALLAH
                     DVYETFKEDIQARGYQYDPETDKFAKVSG"
     gene            complement(406..723)
                     /locus_tag="WJJ54_001172"
     CDS             complement(406..723)
                     /locus_tag="WJJ54_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HEZ7342046.1"
                     /translation="MNKPFITQAQLALYKYQPSSKYFGQSMAVIAQSEFVEFAKINKS
                     ENVIDCFSFFWNRRIKHDIWLISFSDNSEMVIKESLKDGHKIYKFEFCEIVDNCNFDD
                     VFV"
     gene            complement(851..1129)
                     /locus_tag="WJJ54_001173"
     CDS             complement(851..1129)
                     /locus_tag="WJJ54_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342047.1"
                     /translation="MYYQVGNKCLEKHQAENLYFSLVVPRIKENGQIVRPEYNGSLWK
                     MSDGQPLRLLLAECSPKDNLQSGLETGWIVFGVMASVYFVSLLKKVLK"
     gene            complement(1136..1420)
                     /locus_tag="WJJ54_001174"
     CDS             complement(1136..1420)
                     /locus_tag="WJJ54_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342048.1"
                     /translation="MFGGRLKNAPSITAKHFLKENIMKFINTCRKYGAKLAVVTAAPL
                     ALAAHANTTLPDTAKNALEAAKADGMEAGWIVVGVFAALFVFSIVKRVMK"
     gene            complement(1428..1625)
                     /locus_tag="WJJ54_001175"
     CDS             complement(1428..1625)
                     /locus_tag="WJJ54_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342049.1"
                     /translation="MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAI
                     NAGLEEIGNQYEFVVFGFLKD"
     gene            complement(1630..1920)
                     /locus_tag="WJJ54_001176"
     CDS             complement(1630..1920)
                     /locus_tag="WJJ54_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342050.1"
                     /translation="MNIQLQGHIVGVKKFNGQIEGRSFDYCRLIVATPLDSSQGNALG
                     SSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVIGFQLVKKG"
     gene            complement(1965..3308)
                     /locus_tag="WJJ54_001177"
     CDS             complement(1965..3308)
                     /locus_tag="WJJ54_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HEZ7342051.1"
                     /translation="MEDKQGMTKAVAGVMTDAPADGRKPTTASNLPPLSNRGGTETET
                     AGRVQEVFECYETYITDGKGNLLGVPLRRGVSDSAFIDQISFSFHEKTFFDKYGVRVS
                     LLEDEDFIRAASMLAEEVFGFGIYKESKGSGGRFYERCWLMGSEDVLYGRVHFGGQNN
                     TILFELTGTGCGVAKEGWESRLFAFLTNAIRPKITRVDIAKDFFNGEYSPNQAREDRN
                     KGMFTCHHVKPKGECLGSDWEEDDEAKMTKGKTYGIGSRESSKYVRVYEKGKQLGDKT
                     STWTRFEIEFKAKDIVIPFEVLQNPGEYFGGAYPICERFVQKATRIHAVKEDKVISAD
                     RYLEWVKKQFGRAANGLKFIFPELDKAKLFELIEPSHHKLPKSLAPEAYDCAFLKAQA
                     IHEQPAFKPYKDPYYMYEYYENLEKQLEQQKHVNNEESYNNFIYDKFARLPISWA"
     gene            complement(3379..3624)
                     /locus_tag="WJJ54_001178"
     CDS             complement(3379..3624)
                     /locus_tag="WJJ54_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342052.1"
                     /translation="MAGATIRIIDRQTDEVIAKKTIYVFEKGLDGTGGARMPWKFAIL
                     CNKERLTSSEPLSDFVLSVLKPYILRPLYIASLRRDD"
     gene            complement(3625..3975)
                     /locus_tag="WJJ54_001179"
     CDS             complement(3625..3975)
                     /locus_tag="WJJ54_001179"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342053.1"
                     /translation="MQNGGGKIYQTADNVEGIMLLKVVPERTVSADAKTRDPMWDNAA
                     LQTSEGVNFIARFLGFFSDGEYRYVDVLQPNHSDIIRYSGKDFPLNQILNHIHPARYA
                     VTFENNVDSKLRRH"
     gene            complement(3912..4254)
                     /locus_tag="WJJ54_001180"
                     /pseudo
     CDS             complement(3912..4254)
                     /locus_tag="WJJ54_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218854.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            4490..5917
                     /locus_tag="WJJ54_001181"
     CDS             4490..5917
                     /locus_tag="WJJ54_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HEZ7342054.1"
                     /translation="MFFSALKSFLSRYITVWRNVWAVRDQLKPPKRTAEEQAFLPAHL
                     ELTDTPVSAAPKWAARFIMAFALLALLWSWFGKIDIVAAASGKTVSGGRSKTIQPLET
                     AVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALES
                     RTVPHIDMAQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQLQSALRGHQAELQSAKA
                     QEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ
                     AAIAQAEQNRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGT
                     VQELATYTVGGVVQAAQKMMVIAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY
                     TRYGYLTGKVKSVSHDAVSHEQLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIK
                     TGKRRVLDYLLSPLQTKLDESFRER"
     gene            5986..7389
                     /locus_tag="WJJ54_001182"
     CDS             5986..7389
                     /locus_tag="WJJ54_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEZ7342055.1"
                     /translation="MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVS
                     LFTLPLSLSPSVSAFTLPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSA
                     NASYQRQPPSISSTRETQGWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREEL
                     LLKVAESYFNVLLSRDTVAAHAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDN
                     ALAQEIAVLAEKQTYENQLNDYTDLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIA
                     LSNNHEYRMQQLALQSSGQALRAAQNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKG
                     MSVGVQLNLPLYTGGELSGKIHEAEAQYGAAEAQLTATERHIKLAVRQAYTESGAARY
                     QIMAQERVLESSRLKLKSTETGQQYGIRNRLEVIRARQEVAQAEQKLAQARYKFMLAY
                     LRLVKESGLGLETVFAE"
     gene            complement(7553..8340)
                     /locus_tag="WJJ54_001183"
     CDS             complement(join(7553..8085,8085..8340))
                     /locus_tag="WJJ54_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611222.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEZ7342056.1"
                     /translation="MSQTAATFNLSRNTLYLWIRLKKQTGSLKHQVTGLNAVKSDRQK
                     PAQYVGQHPDAYLHEIAKHFDCTAATVCYALKQMGITRKKRPTTYKEQDPAKVTHYLT
                     QPAEFSDYQRVYLDETGFDRYLFCPYTRSLKGQIVKAQISGKRYQRLSLVSAQVGNRL
                     IAPMVYQNTMIGVFFEAWFQQCLLPALTQKSVIILDNARFHRMGVLREMAEKLGHKVL
                     PLAPYLPELNPIEKVWANIKRYLRTVLSDYARFDDALLSYFDFN"
BASE COUNT         2136 a         2005 c         2071 g         2310 t
ORIGIN      
        1 taccttttag gcggcaacag gcgcacttag cctgagacct ttgcaaattt gtcggtttcg
       61 gggtcgtatt ggtagcctcg tgcctgtatg tcttctttga aagtttcgta tacgtcatgg
      121 gctaaaaggg ctgttccgac atagggaacc gcccttgtgc tgaatttcgc gcctaagcgg
      181 gcaagtttgc cgccccccgc caatacgccg gcgcgggaaa cgctggcggt tattttggcg
      241 ttgattcggg cttttgcgcc cgtagggatg tgtgttaaat ctaccgtttt tattaaatca
      301 gatgaataag ttttactatt tttaggtaca aacttatgaa ttttcgcacc ttgtccggta
      361 tcaactgaaa cagtttcaga tatttttact gcatttgcat tcgcttcaaa cgaatacatc
      421 atcaaaattg caattatcga caatttcgca aaattcaaat ttgtatattt tatgaccatc
      481 tttcagggat tctttaatta ccatttctga attatcagaa aatgagatta gccaaatatc
      541 atgtttaatt cttctattcc agaaaaaaga gaaacaatca ataacatttt cagacttatt
      601 aatcttcgca aattcaacaa attcagattg cgctataacc gccatcgatt gcccaaaata
      661 cttgcttgac ggctgatatt tataaagtgc caactgcgcc tgagtgataa acggcttgtt
      721 catggttctg cctttcaaag gttgttttga aagcctgatt ttgacaccat aacttcatgc
      781 gctcaattct taaacagaac cgccccgatt aatacgggta cggaaacgcc gagataaaaa
      841 taaaaatcca tcatttcaaa acctttttca gcagggaaac aaagtaaacg gatgccatca
      901 cgccgaatac tatccagcct gtttcaagac cgctttgcag gttgtctttc ggactgcatt
      961 ccgccaataa aagccttagc ggctgaccgt ccgacatctt ccacaggctg ccgttatatt
     1021 ccggcctgac aatctgtccg ttttctttga ttcttggtac taccaagctg aaataaaggt
     1081 tttcagcctg gtgcttctca agacatttat ttccgacttg gtagtacatg ccgtcttact
     1141 tcatcactct cttaacgatg gaaaacacaa aaagcgcggc gaaaacgccc actacaatcc
     1201 aaccggcttc cataccgtcc gcttttgcgg cttccaaagc gttttttgcc gtatcgggca
     1261 acgttgtatt tgcatgtgcg gccaaagcca ggggagcagc tgttacaaca gccagttttg
     1321 cgccgtattt acggcaggtg ttaataaatt tcatgatatt ttccttcaaa aagtgtttgg
     1381 cggtaatgga tggagcgttt ttcaaacgac cgccgaacat ccgaaaatca gtctttcaaa
     1441 aatccgaata cgacaaattc gtattggttg ccgatttctt ccaaacctgc gttaatcgct
     1501 tcttcgaagt cgtagaaata atcggcattg gtgattaatt tggtatgtcc gatgtcgccc
     1561 gtttcaggag agagatacag aaagtcccct gttgatacgg actggacaac atagactttc
     1621 tgcattcaat cagcctttct tcacgagttg aaaaccgatg actttcagtt tttgggtttt
     1681 gcccgtagta actatttcca cgttcaggtt tgcttcgatg ggaaattggg cgtttcggaa
     1741 ctgctcgaaa ttggcagagc cgccgaaatc gtattcagta gtagagctgc ccaatgcgtt
     1801 gccttgggag ctgtctaagg gtgtggcgac aatcaggcgg caatagtcga agctcctgcc
     1861 ttcgatttgt ccgttgaatt ttttaacgcc gacgatgtgg ccttgaagtt ggatgttcat
     1921 tttttggttt ccttgtgtga ttaaacgtct ttcggacaga cactttaagc ccatgaaatc
     1981 ggtagtcttg cgaatttgtc gtaaatgaag ttgttatagc tttcttcatt gttgacgtgt
     2041 ttttgctgtt caagctgttt ttcaagattc tcgtaatatt cgtacatata gtaagggtct
     2101 ttgtacggtt tgaatgcggg ctgttcatga atggcttgag ctttcaaaaa ggcgcagtcg
     2161 taggcttcgg gagccaaaga cttgggcagc ttgtgatgac tcggctcaat cagttcaaac
     2221 agtttggctt tgtccaattc gggaaaaatg aatttcagac cgtttgccgc acgtccaaac
     2281 tgttttttta cccattcaag gtagcggtcg gctgaaatga ccttatcttc cttaaccgcg
     2341 tgtatgcgcg ttgccttttg gacgaatcgt tcgcaaatcg gatatgcgcc gccgaaatat
     2401 tcgcccggat tctgcaaaac ttcaaaaggg ataacgatgt cttttgcttt gaattcaatt
     2461 tcaaagcgcg tccatgtgct tgttttatcg cccaactgct tgcctttttc atagacgcgg
     2521 acatatttgg acgattcacg ggagccgata ccataggtct tgcctttggt cattttggct
     2581 tcatcgtctt cttcccaatc tgaccccaaa cattcgcctt ttggtttgac gtgatgacag
     2641 gtaaacatac ctttatttcg gtcttcacgg gcttggttcg ggctgtattc gccgttgaaa
     2701 aagtcttttg cgatgtcaac gcgtgtgatt tttgggcgga ttgcattagt caggaatgcg
     2761 aaaagtcgtg attcccagcc ttcttttgcg acgccgcaac cggtgccggt cagttcgaaa
     2821 aggatggtat tgttttgtcc gccaaaatgg acgcgaccgt ataggacgtc ttccgaaccc
     2881 atcaaccaac agcgctcata aaaacgaccg cccgagcctt tggactcttt gtagataccg
     2941 aaaccgaaaa cttcttcggc gagcatggac gcggcgcgaa tgaaatcttc gtcttccaaa
     3001 agacttacac gaacgccgta tttatcgaaa aaggtttttt catgaaatga aaagctaatt
     3061 tgatcgatga acgccgaatc tgatacaccg cgccgaagag gaacgcctaa caggtttcct
     3121 ttaccgtccg ttatgtacgt ttcgtaacat tcgaagactt cctgaaccct gcctgccgtt
     3181 tcggtttctg tcccccccct gttagataag gggggaagat ttgaagcggt tgtcggcttc
     3241 ctgccgtccg ctggcgcgtc cgtcatcacg ccggcaaccg cctttgtcat cccttgctta
     3301 tcttccatgg tgcgaatcct caaaaacggg caaaaaaaag ccctgttact tgtagaaagt
     3361 aaaggacgtt aatttttgtt aatcgtccct tcttagggac gcaatatata agggacgcaa
     3421 tatataaggt tttaaaacgc taagaacaaa atccgataac ggctctgaag aagtaagtct
     3481 ttctttattg cacaagatag caaacttcca cggcattctc gccccacccg tgccgtccaa
     3541 gcctttttca aagacataga tggttttctt ggcaatcact tcgtcagttt ggcggtcgat
     3601 aatccgtatg gtcgcacctg ccactcagtg cctgcgcagc ttggaatcga cattgttttc
     3661 gaacgttacc gcataacggg cggggtgtat atggttaagt atttgattta gcggaaaatc
     3721 tttacctgaa taccgaataa tatcggaatg gttgggttgc aggacatcca catagcggta
     3781 ttccccatcg ctaaaaaatc ctaggaaacg agcaataaaa tttacgcctt cgctggtctg
     3841 taaagccgca ttgtcccaca tcgggtctct ggtttttgca tctgccgaaa cggtacgctc
     3901 aggtactacc ttcaacagca taatcccttc cacattgtcc gccgtctggt aaatctttcc
     3961 cccgccgttt tgcattgttc gttaaacacg gcttcggctt ctttgtattt tctgtcccac
     4021 tcttcttgtg cctgtatttc ttctttgctc gggcagaatt gtttgggaat aatccaaaca
     4081 aacagcatca ggatagcggc ggcggtcagg ctgcctgaaa ggattttgcc ggggtttttt
     4141 gtaggcaaag cggacgagaa accaaagcaa cagcagcatg gtgtcccaat agccgattga
     4201 gaataggatg gccaaacctt ctaggaaatg gcgtaaatcg tttgtggtaa acatgggtag
     4261 ttcctgtggt taaatgtgca ggctgctttt tgccgaacct tgccgcatct caaaagtagc
     4321 ctgcgcttca gcgttgcgtt acgcagtaaa ataatgaata tttgtaacga cttgggtatt
     4381 ttttgtcaat attcccgcct ttcccttaac agctgccgcg ctttccgtta aaattccttt
     4441 acatatttat attgtttcct gtttctatat tgccaaggtt atacccgtta tgtttttctc
     4501 cgccctgaaa tcctttcttt ctcgatacat tactgtatgg cgcaatgttt gggcggtgcg
     4561 cgaccagttg aaaccgccca aacgcacggc ggaagaacag gcgtttttgc ccgcgcattt
     4621 ggaactgacc gatacgccgg tctctgccgc tccgaaatgg gcggcgcgtt ttattatggc
     4681 gtttgcgctt ttggctttgt tgtggtcctg gttcggcaaa atcgatattg tggcggcggc
     4741 ttcgggcaaa acggtgtcgg gcgggcgcag caaaaccatc cagccgctgg aaacggcggt
     4801 ggttaaggcg gtacatgtgc gcgacgggca gcatgtgaaa cagggagaaa cgctggcgga
     4861 actggaggct gtgggaacag acagcgatgt ggtgcagtcg gagcaggctt tgcaggctgc
     4921 ccaattgtcc aaactgcgtt atgaagcggt attggcggca ttggaaagcc gtaccgtgcc
     4981 gcatatcgat atggcgcaag cacggtcttt aggtctctcc gatgccgatg tgcaatcggc
     5041 gcaggtgttg gcgcagcacc agtatcaggc atgggcggcg caggatgcgc aattgcagtc
     5101 ggctttgcgc ggccatcagg cggaattgca gtcggccaag gcgcaggagc agaagctggt
     5161 ttcggtgggg gcgatcgagc agcagaaaac agcagactac cgccgtttgc gggccgacaa
     5221 ttttatttcg gaacatgcgt ttttggagca gcagagcaaa tcggtcagca attggaacga
     5281 tttggaaagt acgcgcggtc agatgaggca gattcaggcg gccattgcac aggcggagca
     5341 gaatcgggtg ctgaatacgc agaacctgaa acgcgatacg ctggatgcgc tgcgccaggc
     5401 aaacgaacag attgaccaat accgcggcca aacggataag gcaaagcagc ggcagcagct
     5461 gatgacaata cagtcgcctg cggacggcac ggtgcaggaa ttggccacct atacggtggg
     5521 cggtgtggtg caggctgccc aaaaaatgat ggtgattgcg cccgatgacg acaaaatgga
     5581 cgtggaagtt ttggtattga acaaagacat cggttttgtg gaacagggac aggatgcggt
     5641 ggtgaagatt gagagctttc cctatacgcg ctacggttat ctgacgggca aggtgaaaag
     5701 tgtcagccat gatgcggtaa gccacgaaca gttgggcttg gtttatacgg cggtggtgtc
     5761 gctggacaaa cataccttga atattgacgg caaagcagtg aatctgacgg cgggcatgaa
     5821 tgtcacggcg gagattaaaa cgggtaaacg gcgggtgctg gattatctgt taagcccgct
     5881 gcaaaccaaa ttggacgaaa gctttaggga gcgataggcg gatccgtact gggcatttgt
     5941 tatccgccgg ttcggacatg cagactgcct gaaaccattg cccggatgac attgctcaat
     6001 ctaatgataa tgcaagatta cggtatttcc gtttgcctga cactgacgcc ctatttgcaa
     6061 catgaactat tttcggctat gaaatcctat ttttccaaat atatcctacc cgtttcactt
     6121 tttaccttgc cactatccct ttccccatcc gtttcggctt ttacgctgcc tgaagcatgg
     6181 cgggcggcgc agcaacattc ggctgatttt caagcgtccc attaccagcg tgatgcagtg
     6241 cgcgcacggc aacaacaagc caaggccgca ttccttcccc atgtatccgc caatgccagc
     6301 taccagcgcc agccgccatc gatttcttcc acccgcgaaa cacagggatg gagcgtgcag
     6361 gtgggacaaa ccttatttga cgctgccaaa tttgcacaat accgccaaag caggttcgat
     6421 acgcaggctg cagaacagcg tttcgatgcg gcacgcgaag aattgctgtt gaaagttgcc
     6481 gaaagttatt tcaacgtttt actcagccga gacaccgttg ccgcccatgc ggcggaaaaa
     6541 gaggcttatg cccagcaggt aaggcaggcg caggctttat tcaataaagg tgctgccacc
     6601 gcgctggata ttcacgaagc caaagccggt tacgacaatg ccctggccca agaaatcgcc
     6661 gtattggctg agaaacaaac ctatgaaaac cagttgaacg actacaccga cctggatagc
     6721 aaacaaatcg aggccataga taccgccaac ctgttggcac gctatctgcc caagctggaa
     6781 cgttacagtc tggatgaatg gcagcgcatt gccttatcca acaatcatga ataccggatg
     6841 cagcagcttg ccctgcaaag cagcggacag gcgcttcggg cagcacagaa cagccgctat
     6901 cccaccgttt ctgcccatgt cggctatcag aataacctct acacttcatc tgcgcagaat
     6961 aatgactacc actatcgggg caaagggatg agcgtcggcg tacagttgaa tttgccgctt
     7021 tataccggcg gagaattgtc gggcaaaatc catgaagccg aagcgcaata cggggccgcc
     7081 gaagcacagc tgaccgcaac cgagcggcac atcaaactcg ccgtacgcca ggcttatacc
     7141 gaaagcggtg cggcgcgtta ccaaatcatg gcgcaagaac gggttttgga aagcagccgt
     7201 ttgaaactga aatcgaccga aaccggccaa caatacggca tccgcaaccg gctggaagta
     7261 atacgggcgc ggcaggaagt cgcccaagca gaacagaaac tggctcaagc acggtataaa
     7321 ttcatgctgg cttatttgcg cttggtgaaa gagagcgggt tagggttgga aacggtattt
     7381 gcggaataaa gcaggctgaa acggttatga aattcccaaa gcagcctgca ccccgtttcg
     7441 aaagtgcagg ctgctttggg attgatccga tactttcaca ttctcattgc ctttaaataa
     7501 agcacagtta aaaacacatt taaattaagt gcgaattaat tcaaatgtat attcaattaa
     7561 aatcaaaata ggacagtagt gcatcgtcaa atcgggcgta atcagacaaa acggttctca
     7621 gataccgctt aatattcgcc cacactttct caatcgggtt gagctcaggt aaataaggtg
     7681 caagaggcaa taccttatgt cccaattttt ccgccatttc ccgtaagaca cccatacggt
     7741 gaaatcgcgc attatctaaa ataatcaccg atttttgagt caatgcgggc agtaggcatt
     7801 gctgaaacca cgcttcaaaa aagactccga tcatcgtatt ttgataaacc atcggagcaa
     7861 tcagccggtt gccgacttgt gcggacacca aagataagcg ttggtatctt tttccactta
     7921 tctgcgcttt tactatttgc cctttcaggc tgcgggtata gggacagaac aggtagcggt
     7981 caaatcctgt ttcatccaaa taaacacgtt ggtagtcgga aaattcggcc ggctgtgtca
     8041 aataatgcgt tactttggcc gggtcttgtt ctttgtaagt ggtggtcttt ttttgcgcgt
     8101 tatccccatc tgtttgagtg catagcaaac ggtggctgcc gtacaatcaa aatgtttggc
     8161 gatttcatgc agataggcat ccgggtgttg cccaacatat tgagccggtt tttgcctatc
     8221 cgatttgacg gcatttagac cggtaacttg atgttttagg ctgcctgttt gttttttaag
     8281 gcgaatccac aggtaaagcg tgtttcttga caagttaaac gttgctgcgg tttggctgat
     8341 gtttttgcat tgttcgtaat atcgtggatt aaatttaaac cagtacggtg ttgcctcgcc
     8401 ttgccgtact atttgtactg tctgcggctt cgtcgccttg tcctgatttt tgttaatcca
     8461 ctatagttta aagctttgtt tcttaagtcc gcagagtatg ccatggttag accttcaaag
     8521 tt
//
LOCUS       DAWKJW010000074         8489 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.074, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000074 DAWKJW010000000
VERSION     DAWKJW010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8489)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8489)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8489
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.074"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(551..1597)
                     /gene="recA"
                     /locus_tag="WJJ54_001184"
     CDS             complement(551..1597)
                     /gene="recA"
                     /locus_tag="WJJ54_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEZ7342057.1"
                     /translation="MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGS
                     LGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPV
                     YARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGVDMVVVDSVAALVPKAEIEGDMG
                     DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFY
                     SSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELID
                     IGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEIADEIDAKIRALNGVEMHIT
                     EGTQDETDGERPEE"
     gene            1851..2615
                     /locus_tag="WJJ54_001185"
     CDS             1851..2615
                     /locus_tag="WJJ54_001185"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HEZ7342058.1"
                     /translation="MCSCLVVKNTVIGSGRTKIAVPLVARDAAVLSAVLDQIKNLPFD
                     IVEFRADFLECAGSIGEVLRHTQTVRDALPDKPLLFTFRRHGEGGAFPCSDGYYFELL
                     DALIESRLPDIIDIELFAGETAVRRAVADAQKNGIAALLCNHEFHRTPPQEEIVCRLK
                     QMEDCGADICKIAVMPQSAEDVLTLLSATLEAKRLAAKPVVTMSMGQTGAVSRLAGQV
                     FGSSITFGSGTQNSAPGQIGVSALRATLDCLENGAD"
     gene            2635..4650
                     /gene="rep"
                     /locus_tag="WJJ54_001186"
     CDS             2635..4650
                     /gene="rep"
                     /locus_tag="WJJ54_001186"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HEZ7342059.1"
                     /translation="MMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKHLIVNV
                     GYLPHTVAAITFTNKAAAEMQERVAKMLPKPQTRGLTICTFHSLGMKILREEANHIGY
                     KKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNIWEQ
                     QTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTN
                     TCQFTLMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYR
                     STARILKIANKVIENNPKLFTKKLWSKLGEGEPVKVVACQNEQHEADWVVSQIVKQKL
                     IGGDKTQYADFAVLYRGKHQARIFEEALRGARIPYQLSGGQSFFDKAEIKDVLSYVRL
                     LANPNDDPAFLRAVTTPKRGIGDVTLGKLNTYAHEHECSLYEAAQNEEALATLNNTNR
                     QHLQTFMDMFVSYLAKAETSEAGEFINSLLEEIDYENHLMQNEEGKAGEIKWRNVGDL
                     VSWFARKGGEDGKNIIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLV
                     GCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGTWQFPEPSRF
                     IDEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRLDNLKKSGAAD"
     gene            complement(4717..5775)
                     /gene="dinB"
                     /locus_tag="WJJ54_001187"
     CDS             complement(4717..5775)
                     /gene="dinB"
                     /locus_tag="WJJ54_001187"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEZ7342060.1"
                     /translation="MSSRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICA
                     ASYEARQFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLS
                     LDEAYLDVTRNFKNIPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPN
                     GQFVLPPHKVMAFLETLPLGKIPGVGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGR
                     YGYRLYDLVRGTDERPVKAERERLQISTEITLPEDLPLEQAAGHLPHLAEDLWRQITR
                     KNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCAALLQAAQMLMARVPPQTEDAFRLI
                     GIGVGHLVPKNQQQGLWA"
     gene            6009..6788
                     /locus_tag="WJJ54_001188"
     CDS             6009..6788
                     /locus_tag="WJJ54_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HEZ7342061.1"
                     /translation="MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSR
                     LGFYEGEGFIWRAYSIVSAEYADTLEYFAVLIQDGPMSARFAKMQQGDTILLDKNATG
                     FLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDR
                     LAALSEHPLVGEYGHSFHFVPVTTRAANPSGLSGKRIPELLKNSSIEQALHTKFTPES
                     TRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF"
     gene            complement(6988..8400)
                     /locus_tag="WJJ54_001189"
     CDS             complement(6988..8400)
                     /locus_tag="WJJ54_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEZ7342062.1"
                     /translation="MLFEFKENKMIVASRWPLLEKAFLRFGMPVAVVDLESTGGNLYE
                     DRVTEVALVKFEQGRVVRHEWLVNPQKPIPQFVAGLTGISDGMVADAPVFAEIAGELF
                     SVLKGCVLVAHNSRFDYTFLKHEFHRAGIGFSSPALCSVQLSRCLYPQFYKHSLDSII
                     ERLGIVVEDRHRAMADVSALCDYLEYSLSEHGVEEWIRQCFRLMNPKPLPAALPERLR
                     EQLYGLPDGMGVLACFDGGGAINYIGTFERVYSEVSALLDSGKASFDWCNTEAVRFFP
                     ALGRLHAHKVKAELVRHYGADCYVSAKNLLKTFTTVRFEKGSDGMLDAKTAALKNGVA
                     DNPPTGLFVNKKAARRALSLWAETYGLCPAAAGILPDGYAEDEPCPVYVSGRCDKACG
                     RSDEQVLAFAHKLPVLDWGKMHEVEITETDPLTREKVVLHGMGGALEMDGGLWYFDKD
                     LPDVFKAKFKTDRKNIKEIG"
BASE COUNT         2120 a         2424 c         2098 g         1847 t
ORIGIN      
        1 cgggaatcca accccgtggg agcagaaact tacaccccgt cattcccgcg aacgcgggaa
       61 tccagtaacc gaaaaaccac aggaatctat cggaaaaaca gaaaccctcg accgtcattc
      121 ccgcgaacgc gggaatccag taaccgaaaa accacgggaa tctatcggaa aaaacagaaa
      181 ccctcgaccg tcattcccgc gaacgcggga atctagaacg tagaatctga gaaaccgttt
      241 tactcgataa atttccatgc caacaggtct ggattcccgc cttcgcggga atgacggcat
      301 attttttgca tttgatataa agggtcgttt gaattttgtt cagcaagtgc aaagtgttgc
      361 acataaaagg gcgcaggctt catccgtaaa gtcggcgcag gatagaggca aagcaggcgt
      421 aggtcgggct gtagcaactg tatttttcac cccgtcgggc aaaaatacca aaactcaaat
      481 caagccgttc ggaggcggct caaaaaacgg tacttcgcag cagaagtacc gtttatcggg
      541 atttcaggtt ttattcttcg gggcgttcgc cgtcggtttc gtcctgcgtc ccttcggtga
      601 tgtgcatttc tacgccgttg agggcgcgga tttttgcgtc gatttcatca gcaatttcgg
      661 gattttcctt cagccagacg cggacgttgt ctttgccctg accgattttt gcgccgttgt
      721 agctgtacca cgcgccggat ttgttgatga tgtcgttttt tacgccgatg tcgatcaatt
      781 cgccttccca actgatgcct tctccgtaga ggatgtcaaa ctctgcctga cggaacgggg
      841 gggcgacttt gtttttgatg actttgacgc gggtttcgtt gcccaatact tcttcgcctt
      901 ttttgatgga tccggtgcgg cggatgtcga ggcggacgga agaatagaat ttcagcgcgt
      961 tgccgccggt ggtggtttcg gggctgccga acattacgcc gatcttcatc cggatttggt
     1021 tgatgaacac aaccagcgtg ttggtttttt tgatgtgtcc ggtcagttta cgcaaagcct
     1081 ggctcatcag gcgcgcctgc agtccgacgt ggctgtcccc catatcgcct tcgatttcgg
     1141 ctttggggac aagtgcggct acggaatcga cgactaccat atctacgccg ccggagcgca
     1201 cgagcgtatc gcagatttcc aaagcctgtt cgccggtatc gggctgggag aggtaaagct
     1261 cttcgacttt tacgccgagt ttgcgggcgt aaacgggatc gaaggcgtgt tcggcatcga
     1321 caaaggcgca cacgccgccg tttttctggc attgtgcgac ggcttccaag cataatgtgg
     1381 ttttgccaga agattcggga ccgaagattt cgacgatgcg cccgcgcggc agaccgccga
     1441 ctccgagtgc gaggtctaat ccgagcgatc cggtggaaat gacttcgagg ttttcttcct
     1501 gctggctgcc gtccattttc atgatggcgc ctttgccgaa acttttttcg atttgcgcca
     1561 gtgcggcggc aagggctttg cttttgtcgt ctgacattgg ggttactccg gaacaaatgc
     1621 ggtatgtggg atgcggcgca acacgggctg cggcgcggga tttgtatcgt tttcccgatg
     1681 tgcgggctat cggtaatgct gcttcacggg gttgccatta tcgcatattt ccttgcttgc
     1741 cgatatgcgg caggacgcgg cggcttgtgc cggaatggaa tctggatgcc gtctaaaagg
     1801 cggccggctt tgttataatg gcggctgttt tttctgtgtg tgcctgtttt atgtgttcct
     1861 gccttgttgt caaaaatacc gttatcggaa gcggacgcac caaaatcgcc gtgccgcttg
     1921 tcgcccgcga tgccgccgta ctttccgccg tacttgacca aatcaaaaac ctgcccttcg
     1981 atatcgtcga gttccgcgcc gactttttgg aatgcgcggg cagcatcggc gaagtattgc
     2041 gccacacgca gaccgtccgc gacgcgctgc ccgacaagcc gctgctgttt acgttcagac
     2101 ggcatggcga aggcggcgcg ttcccgtgtt cggacggtta ttattttgaa ctgctcgacg
     2161 cgctgatcga aagccgcctg cccgacatca tcgacatcga gctgtttgcc ggcgaaaccg
     2221 ccgtccggcg cgccgtggcg gatgctcaaa aaaacggcat cgccgccctg ctctgcaatc
     2281 atgagtttca ccgcacgccg ccgcaagaag aaatcgtatg ccgtctgaaa cagatggagg
     2341 actgcggcgc ggacatctgc aaaattgcgg tgatgccgca aagcgcggaa gatgtgctga
     2401 ctttgctttc cgccacgctc gaagcgaaac ggcttgccgc caaaccggtt gttacgatgt
     2461 cgatggggca gacgggtgcg gtcagccgcc ttgccggaca ggtgttcggc tcaagcatca
     2521 cgttcggttc gggaacgcaa aactccgcgc cggggcaaat cggcgtatcc gccctccgtg
     2581 cgacactcga ctgcctcgaa aacggcgcag actgatttca gacagcatca aaacatgatg
     2641 aaactcaatc cccaacagct cgaagccgtc cgctacctcg gcggcccact gctcgtcctt
     2701 gccggtgcag gcagcggcaa aaccggcgtg attactcaaa aaattaagca tttgattgtc
     2761 aatgtcggct acctgccgca taccgttgcc gcaattacct ttaccaacaa agccgctgcg
     2821 gaaatgcagg agcgcgttgc caaaatgctg cccaaaccgc aaacgcgcgg gctgacgatt
     2881 tgcacgttcc actctttggg catgaagatt ctgcgcgaag aggcgaacca tatcggttac
     2941 aaaaaaaact tctccattct cgattctacc gacagcgcga aaatcatcgg cgaactctta
     3001 ggcggtacgg gcaaagaagc cgtattcaag gcgcagcacc agatttcctt gtggaaaaac
     3061 gatttaaaaa cgcctgaaga tgtcgttcag acggcatcga acatttggga acaacaaacc
     3121 gcacgcgtgt atgcgagcta tcaggaaacc ttacaaagct atcaggcagt ggacttcgac
     3181 gacttgatcc gcctgcctgc cgtgctgttg cagcaaaaca gcgaagtgcg caacaaatgg
     3241 cagcggcggc tgcgttatct gctggttgac gaatgccaag atacgaatac ctgccaattt
     3301 acgttgatga aacttctgac cggcgcggaa ggtatgttta ccgccgtcgg cgacgacgac
     3361 cagtccatct acgcatggcg cggcgcgaac atggaaaacc tgcgcaaaat gcaggaaaac
     3421 tatccgcaga tgaaggtcat caaactggag caaaactacc gctccaccgc gcggattctc
     3481 aaaatcgcca acaaagtcat cgagaacaac cccaagctgt tcaccaaaaa actttggtcg
     3541 aaattgggcg aaggcgagcc cgtcaaagtc gttgcctgcc aaaacgagca gcacgaagcc
     3601 gactgggtcg tcagccaaat cgtcaaacaa aaactcatcg gcggcgacaa aacccaatat
     3661 gccgatttcg ccgtgttata ccgcggaaag catcaggcga ggattttcga ggaagcattg
     3721 cgcggtgcgc gcatccccta ccagctctcc ggcggacaaa gctttttcga caaagccgaa
     3781 atcaaagacg tgttgtctta tgtgcggctg cttgccaacc ccaatgacga tcccgccttt
     3841 ctgcgtgccg ttaccacgcc caaacgcggc atcggcgatg tcacgctggg caagctcaac
     3901 acttacgcgc acgaacacga atgcagcctg tatgaagccg cgcaaaacga agaagccctt
     3961 gccacgctga acaataccaa ccgccaacac ctgcaaacct ttatggatat gttcgtcagc
     4021 tacctcgcca aagccgaaac cagcgaagcg ggcgagttca tcaacagcct gctcgaagaa
     4081 atcgactatg aaaaccattt gatgcaaaac gaagaaggca aagccggcga aatcaaatgg
     4141 cgcaacgtcg gcgatttggt atcatggttt gcgcgaaaag gcggggaaga cggcaaaaac
     4201 atcatcgaac tcgcccaaac cgtcgccttg atgacgcttt tggaaggaaa agacgaagaa
     4261 gaaaccgatg ccgtctcgct atccacgcta cacgccgcca aaggtttgga gtatccgtat
     4321 gttttccttg tcggttgcga agaaggcgtt ttgccgcaca acgacagtat cgaagagggc
     4381 aacgtcgaag aagaacgccg cctgatgtac gtcggcatca cccgcgccaa acgccaactc
     4441 acactgaccc actgcgtcaa acgcaaaaaa caaggcacat ggcagttccc cgaacccagc
     4501 cgattcatag acgaaatgcc gcaggaagat ttgaaaatcc tggggcgcaa aggcggcgaa
     4561 ccgattgtca gcaaagaaga aggcagacgc aaccttgccg atataatcgg aaggctcgac
     4621 aacctaaaaa aaagcggcgc ggcggattaa accggagccg caatgccgtc tgaaggcttc
     4681 agacggcatg ttttttggac ggcgtggtaa atcggtttac gcccacaagc cctgctgctg
     4741 gtttttcggc acaagatgtc ccacgccgat gccgataagg cggaacgcgt cttccgtctg
     4801 cggcgggacg cgcgccatca acatttgcgc agcctgcagc agagctgcgc agtcgggcaa
     4861 tacggaggaa taagtcagtg tgcgcgtgat gatgcggaaa tcgtaggtct tcagcttgag
     4921 cgttacgctt tgggcttcga cgtttttgcg cgtgatttgc cgccacaagt cttcggcaag
     4981 atgggggagg tgtccggcag cctgctcgag cggcaggtct tcgggcaggg taatttctgt
     5041 ggagatttgg aggcgttcgc gttcggcttt gacggggcgt tcgtccgtac cgcgcaccaa
     5101 atcatagagg cggtatccgt agcgtccgaa atggtttaag agttcgccgc gctcgaaacg
     5161 gcgcaagtcg cccgccgtcc gcatacccag cgactgcatt tttttcagcg ttaccttgcc
     5221 cacgccgggg attttgccca aaggcagggt ttccaaaaat gccatgactt tgtgcggcgg
     5281 caacacaaac tgcccgttcg gcttgcgcca gtccgacgcg attttcgcca gaaatttgtt
     5341 cggcgcgatg cctgcggatg cagtcaaacc tgtttccgca aaaatggcgg cacggatttc
     5401 tttggcaact tcactggcgt aagggatgtt tttgaaatta cgggtaacgt caagataggc
     5461 ttcgtccagc gacaagggtt cgattaaatc ggtataacgc ctgaatacgg cgtgaatctg
     5521 cgcggaaacc tgacggtaca aatcgaaatg cggcggcaca tacaccgctt gcggacacag
     5581 ccttttcgcc gttgccaccg acatcgcgga atgcagcccg aactgccgtg cctcatacga
     5641 tgcggcgcaa atcaccgaac gcgcgccctc ccacgcgacg accaccggcc gccctttcaa
     5701 atgcggctgt tcgcgcagct ctaccgatgc gtagaatgcg tccatgtcga tgtggataat
     5761 tttgcgtgaa gacatcggct cttctgagga taaaagggat attctactgc cggcatcggg
     5821 caaattccaa atatacgccc cgatatggga agccccgcat ccgcagcgtt ggaaacaggc
     5881 aaacgcctgc aaacaaagcc ggcaaacgga taacggcata ttgcctgatt gtcattcaga
     5941 cataggaaat gcggaaaaaa acacccaaat tggctataat cccgacaaac acactcaagg
     6001 acaacaacat ggcagcctcg cccgaagcaa aattcactga agaaaagatt ttgtgggtca
     6061 aacaccacac gccgaaactc atcactttcg ccatcagccg tcccgaatcc taccgtttta
     6121 aagccggaca gttctcccga ctcggtttct acgaagggga aggctttatt tggcgtgcct
     6181 actccatcgt ttccgcagaa tatgcagaca cgctcgaata ttttgccgta ctcatccaag
     6241 acggccccat gtcggcccgt ttcgccaaaa tgcaacaggg cgacaccatc ctgctcgata
     6301 aaaatgccac cggcttcctc ctgcccgaac gcttccccga cggcaaggat ttggtgatgc
     6361 tctgcaccgg ctccggcatc gcccccttcc tttccattct cgaacaacct gaaatccgac
     6421 agcgtttcga taccgtcaac ctgatacatt ccgtatcttt tcccgaagaa ttgattttca
     6481 acgaccggct cgccgcattg tccgaacatc ccctggtagg cgaatacgga cactcgttcc
     6541 atttcgtccc tgttaccacc cgtgccgcca acccctcggg cttaagcgga aaacgcattc
     6601 cggaactctt aaaaaacagc agcatcgaac aggcgctgca taccaagttc accccggaat
     6661 ccacacggtt tatgatttgc ggcaacccgg aaatggtcaa agacactttc caaacgctgc
     6721 tcgacatggg ttacgccatg caccgcaacc gcattcccgg tcaaatcatg atggaaaacg
     6781 gcttctaaaa accaccctgc ttgtccgatg cctcggacgg gcaaaccggc acgacacgca
     6841 aaccgcgtcg gcaaaaatgc cgtctgaagc cttcagacgg cattttcgga tacatacaaa
     6901 cggcaacata ttccaaccca aaccgattag gcaatcaata cgaacggctg tttacatact
     6961 taccggcttt caccaaccga tatcgattta accgatttcc ttaatatttt tcctgtccgt
     7021 tttaaacttc gccttaaaca catccggcaa atctttatcg aaataccaaa gcccgccatc
     7081 catttccaat gcgccgccca ttccatgcag aacgactttt tcccgcgtta aaggatcggt
     7141 ttcggtaatt tccacctcat gcatttttcc ccaatccaaa acaggcaact tgtgtgcaaa
     7201 cgccaaaacc tgttcgtcag aacggccaca cgccttatcg catcggcctg aaacatatac
     7261 gggacaaggc tcatcctctg cataaccgtc cggaaggata ccggctgcgg caggacacaa
     7321 tccgtatgtt tccgcccaca acgacaaagc ccgtctcgct gcctttttat tgacaaataa
     7381 tccggtaggc ggattgtccg ccacaccgtt tttcaaagcc gctgttttcg catccaacat
     7441 gccgtctgaa cctttttcaa acctgacggt cgtaaatgtt ttaagcagat ttttggcaga
     7501 tacgtaacaa tccgccccat aatgcctgac caattccgct ttaaccttat gggcatgcag
     7561 cctgcccaat gcgggaaaaa aacggactgc ctccgtattg caccaatcaa acgaggcttt
     7621 tccggaatcc aataaagccg aaacctcgct atatacccgt tcaaacgtac cgatataatt
     7681 tattgctccc ccgccgtcga aacaggcaag cacccccata ccgtcaggca aaccgtacaa
     7741 ctgttccctc aaccgttcgg gcagcgcggc aggcagcggt ttcggattca tcaaacggaa
     7801 acactgcctg atccactcct cgaccccgtg ttccgacaga ctgtattcca aataatcaca
     7861 caatgccgat acatccgcca tcgcacgatg cctgtcttcc acaacaatcc ccaacctttc
     7921 gatgatactg tctaggctgt gcttgtaaaa ttgcggatac agacaccggg acagctgcac
     7981 actgcacaaa gcaggcgatg aaaatccgat acccgcacga tgaaactcat gctttaaaaa
     8041 cgtatagtcg aaacggctgt tatgtgcaac cagcacacaa cccttcaata ccgaaaacaa
     8101 ctcgccggca atctctgcaa aaacaggcgc atcggcaacc atgccgtctg aaatccccgt
     8161 cagccccgcc acaaactgcg gaatcggttt ttgaggatta accaaccact catgcctcac
     8221 cacccttccc tgctcaaact tgaccaaagc cacttcggtt accctgtctt catacagatt
     8281 gccgcccgtc gattccaaat cgaccacggc aaccggcatt ccaaaccgta aaaacgcctt
     8341 ttccagcaag ggccaacggg aagcaacaat cattttattc tctttaaatt caaacaacaa
     8401 accgatattt tacactttta aggcatttca tccaacaaaa caattgacag aatccgatga
     8461 ttaccctaaa attcaaatct ttcttgcag
//
LOCUS       DAWKJW010000075         8421 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.075, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000075 DAWKJW010000000
VERSION     DAWKJW010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8421
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.075"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            125..1585
                     /locus_tag="WJJ54_001190"
     CDS             125..1585
                     /locus_tag="WJJ54_001190"
                     /inference="COORDINATES: protein motif:HMM:NF012744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ7342063.1"
                     /translation="MEIDTMISLKDIFEILKKKGMRQKKKLLTPNVLQKQNNLTPAKK
                     NLISIHPNISRDLLSLNFVDYRITTTKVVNEANIIFYNKHFSLDYVRLALELDINQYD
                     MIITIKTLRTGGTDKLLLRYLEGIKFSNPKINIILLILEGDSGEWDDLVPENVTLIYL
                     KKYTKSSFNQTVYNQILQRLIIQFEIKILWNFNCRETYNFTERCSPFIREYLSVWGLV
                     FAHWLRPGSLQEFGMAHENLPFVIDDYDVLISDNKTFTEYLCHQYGWNQDKFKTLYVP
                     NSSESIQVKHHRKGNSLKVLWASGIEWNKGVEILPKIAEKISNLPITIDIYGGTKNKD
                     GEDLLLKLNKDILLKENIKYKGKFDNFRKLVEEGQYDCFLFTSIIEGMPNVIIEAAER
                     QMSIITPLIGGLGEFLNSENAYIVDNKNDVEKYIIELQKVLENKNTGKFTKEINLAHS
                     YNKKFTLDSFKLSYNSLQDYLYTIKDKKNKRIINEN"
     gene            1575..3869
                     /locus_tag="WJJ54_001191"
     CDS             1575..3869
                     /locus_tag="WJJ54_001191"
                     /inference="COORDINATES: protein motif:HMM:NF024572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEZ7342064.1"
                     /translation="MKIELINSYKQKKYVEAKYIAKKILLTDAKDYEALFYLANSFLF
                     TGEFKSAKDYFQLIIEYYPDKYQGYEGLYKIYKANGDRYNELIQLKKILENFPNVVHI
                     YKETTLLLLQENLINEAENISLECIKKFPDSYHGYESYAFVLEKKQEWEKALEIWNNI
                     IHKFPNFLAAHLNMLKLHVKIYGYERTTSLFESSSQKFKNTEKIDKLYAIEAEKAFKW
                     NDATEIWSRLLSQYPLNTFFVSRKAIALRHVKGIIASREYLFSALKDQPDNLVLKLNI
                     LDTYLIEKKWEYSLLYGNDIIKNVQDTAQKSNIYFKLRIPYRELKKLDELENIFLDLI
                     KENPSIYISWKGYATVPELMLDGNEKLLKKACHRWKRASEKFPNIVEAKIKYGEILLS
                     MQQLDFANQVFIELKRDFPNNFYAWKGWCLAAHHMRNWVEARKRLLETRIKFPSQFNS
                     IYYYLVNVLQNDNRLAEIENSFIWHTKSLFKENIKNSLNECLELSKINIYRIIGNYKK
                     ADEKALELLNVLPFKDPTTLPKPQKSNISQYIEHSKNNETLVICFSGMDGKRTQNHYR
                     NYGLQCIDKIAFNSSDTYNYQGFANKTIKYNFLLLRDNYNSWYQIHTDYYRTIIENYI
                     KSGNYKKIVLVGASSGGFAAMMYGQLVHADIVYVQAPQTLAFTSYSTQFNKELELQYN
                     LSSTAYTSIAKLQNQSNGFIPKVYVQVCENNGIDMFSINMLNTSDPNLFVHKYKNDTH
                     SVHTIIGKSKMFQDICSIIDDLQK"
     gene            3941..4792
                     /gene="kdsA"
                     /locus_tag="WJJ54_001192"
     CDS             3941..4792
                     /gene="kdsA"
                     /locus_tag="WJJ54_001192"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEZ7342065.1"
                     /translation="MPNINLPTFNIKISNSLPFTLFGGINVLEDLDSTLFACEKYVEV
                     TEKLKIPYVFKASFDKANRSSIHSYRGVGLEEGMNIFSAVKDRFGVPVITDVHEPYQC
                     NAVAEVVDILQLPAFLARQTDLVFAMAQTGRVINIKKPQFLSPEQMKNIVEKFKEAGN
                     DQLILCERGANFGYDNLVVDMLGFGVMKKTCDDLPVIFDVTHALQKRDSGSSASGGRR
                     EQVLDLAMAGMATGLAGLFLEAHPNPDKARCDGPSALPLDKLEDFLLRVKAVDETVKS
                     FPKLDIA"
     gene            4792..6081
                     /gene="kdsB"
                     /locus_tag="WJJ54_001193"
     CDS             4792..6081
                     /gene="kdsB"
                     /locus_tag="WJJ54_001193"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019920009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEZ7342066.1"
                     /translation="MNTENLKTVIVVPARYASTRLPGKPLADICGKPMIQHVYERACK
                     VPYIDDVIVAVDDRRVAEVVESFGGKVIMTSTQHDSGTDRLVEVMGKYAADIYINIQG
                     DEPLIRSEDIALLAQGMKDEQISVGTLCHALPASEATNPNTVKVVLSANGNALYFSRS
                     PIPYPRDKEHAYYFKHIGVYAYRKETLAKYSNLKQPDIELSEKLEQLRLLDAGIDIRV
                     FEVPETGPGVDTPECLERVRAIMSGQLPIDKHSVNLADIRLVITDVDGVLTDGGIFYN
                     ENGECLKRFHVRDGLGIRLLEESGIKVAVLSGRDSPTLRKRIDDLGISYYQLGIKDKH
                     AACIELMQEANCLKEQTAYIGDDTIDLPAFSACGLSFAVADTPEYIRNQADITLTLPG
                     GYGAFRELADKILAAQGKEDVFSSEAGFAQVMHGANQ"
     gene            6108..7056
                     /locus_tag="WJJ54_001194"
                     /pseudo
     CDS             6108..7056
                     /locus_tag="WJJ54_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240181.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
     gene            7130..8146
                     /gene="galE"
                     /locus_tag="WJJ54_001195"
     CDS             7130..8146
                     /gene="galE"
                     /locus_tag="WJJ54_001195"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEZ7342067.1"
                     /translation="MKVLVTGGTGFIGSHTAISLIKAGYDVVILDNLCNSSINILPRL
                     KEITGKDITFYQGDIRDRALLQKIFAEHKIETVMHFAGLKAVGESNVLPMKYYDYNVS
                     GSLILAEEMAKAGVFSIVFSSSATVYGDPARTPITEDMPVGGTTNPYGTSKYMVERIL
                     SDIQKSDSRWSVILLRYFNPVGAHESGLIGEYPNGIPNNLLPYICQVASGKLPYLSVF
                     GDDYPTPDGTGVRDYIHVVDLADGHLKAMQAKAKESGVHIYNLGTGNGYSVLDMVKAF
                     EAASGLDIPYQIKPRRDGDIAVCFADPAFTESQIGWKAQFGLSQMMEDSWRWVSNNPN
                     GYDD"
     gene            8243..>8421
                     /locus_tag="WJJ54_001196"
     CDS             8243..>8421
                     /locus_tag="WJJ54_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEZ7342068.1"
                     /translation="MKKILVTGGAGFIGSAVVRHIINDTQDAVVNVDKLTYAGNLESL
                     ESVANHPRYAFEQVD"
BASE COUNT         2868 a         1344 c         1548 g         2661 t
ORIGIN      
        1 atagaatatt taaattatac aatccatcat aaagaagaaa tatataaaaa tgtttttcct
       61 tcaatagcta ataccatttt ttctcataaa aattttctga taacccaaaa cttttctgat
      121 ttatatggag attgatacaa tgatatcatt aaaagatatt tttgaaattt tgaaaaaaaa
      181 aggaatgcgt caaaaaaaga aattattgac gccaaacgtt ttacagaaac agaataactt
      241 aactccagca aaaaagaatt taatttctat acatccgaat attagtaggg atcttttatc
      301 tttaaatttt gtagattatc ggattactac tactaaagta gtaaatgaag caaatataat
      361 tttttataat aaacattttt ctctagacta tgttcgatta gcccttgaac tagatattaa
      421 ccagtacgac atgataataa ccataaaaac attgcgtacg gggggaacag acaaattatt
      481 attacgatat ctagaaggaa tcaaatttag caaccctaaa attaatatta ttttactaat
      541 attagaagga gattcaggag aatgggatga tcttgtccca gaaaatgtaa cgctcattta
      601 tttaaaaaaa tatacaaaat cttcatttaa tcagactgtt tataatcaga ttctacaaag
      661 attaataatt caatttgaga ttaaaatctt atggaatttt aattgtaggg aaacatataa
      721 ttttacagaa agatgctccc cattcatacg tgaatattta tcggtgtggg gattagtttt
      781 tgctcattgg ctgcgaccag gaagtttaca agaattcggc atggctcacg aaaatttgcc
      841 atttgtgatt gatgactacg atgtattgat ttctgacaat aaaacattta ccgagtattt
      901 atgtcaccaa tatggctgga atcaagataa attcaaaact ttatatgtgc ccaactcttc
      961 agaatctatt caagttaaac accatcgtaa aggtaactca ctaaaagttt tatgggcttc
     1021 aggtatcgaa tggaataaag gtgtagaaat tcttcctaaa attgcagaaa agatttcaaa
     1081 cttaccaatt actattgata tttatggagg tactaaaaat aaagatggtg aagacttatt
     1141 attaaagctt aataaagata ttttattaaa ggaaaatatt aaatataaag gtaaatttga
     1201 taatttcaga aaattagtag aagaaggcca gtatgattgt tttctattta caagtataat
     1261 tgaaggaatg ccaaatgtta ttatagaagc agctgagaga caaatgtcaa tcattactcc
     1321 tcttattggg gggcttggtg aattcttaaa ctcagaaaat gcatatattg ttgacaataa
     1381 aaatgatgtg gaaaaatata taatagagtt acaaaaagtt ttagagaata aaaatactgg
     1441 aaaatttaca aaagaaatta acttagctca tagttataac aaaaaattta ccctcgatag
     1501 ttttaagtta tcatataatt ctttacaaga ttatttgtat actattaagg ataagaaaaa
     1561 taaaaggatt ataaatgaaa attgaattaa ttaattcata taaacagaaa aaatatgtag
     1621 aggcgaaata tattgctaaa aaaatattac ttacggatgc aaaagattat gaggccttat
     1681 tctatcttgc aaacagcttt ttatttacag gagaattcaa aagcgcaaaa gactactttc
     1741 agttgattat agaatattac cctgataaat accaaggata cgaaggctta tataagattt
     1801 ataaagccaa tggagatagg tataatgaat taatccaact aaagaaaatt ttagaaaatt
     1861 tcccaaacgt tgttcatata tataaagaaa ctactttgct tctactacaa gaaaatttaa
     1921 taaatgaagc tgagaatatt agccttgagt gtattaaaaa atttcctgat tcctaccatg
     1981 gatatgaaag ctatgctttt gtattagaaa aaaagcaaga gtgggaaaaa gcacttgaaa
     2041 tatggaataa tatcattcat aaatttccta atttcttagc agcacattta aatatgctga
     2101 aattacacgt gaaaatttat ggctatgaaa ggactacctc actatttgag agtagttctc
     2161 aaaagtttaa aaatactgag aaaatagata aattatatgc aattgaagct gaaaaagcct
     2221 ttaaatggaa tgatgctaca gaaatctggt cacgactgct ttctcagtat cctctaaata
     2281 ccttttttgt atcccgcaaa gcaatagcac taagacatgt aaaaggcata atagcctctc
     2341 gagaatattt attttctgca ctcaaggatc agcctgataa tttagtatta aaactaaata
     2401 tattagatac ttacttaatt gaaaaaaaat gggaatattc tctattatat ggaaatgaca
     2461 ttataaaaaa cgtgcaagat actgcacaaa aatcaaatat ttattttaaa cttcgaatcc
     2521 cttatcgtga attgaaaaaa ttagatgaac tagaaaacat ttttttagat ttaattaaag
     2581 agaatccgag tatttatatt agctggaaag gttatgctac agttccagaa ttaatgttag
     2641 atggtaatga aaaacttcta aaaaaagctt gtcatcggtg gaaaagagcc tctgaaaaat
     2701 ttccaaatat cgttgaggct aaaataaaat atggtgagat tcttttgtct atgcaacagc
     2761 tagattttgc taaccaagtt tttattgaac ttaaacgaga ctttccaaat aacttttatg
     2821 catggaaagg ttggtgccta gctgctcatc atatgagaaa ttgggtagaa gctcgtaaaa
     2881 ggcttttaga aactcgtatt aaatttccaa gtcagtttaa tagcatttat tattatttag
     2941 ttaatgtatt acaaaatgat aatagactag ccgaaataga gaactccttt atctggcata
     3001 ctaaatcttt gtttaaagag aatataaaaa actcccttaa tgaatgttta gaactatcta
     3061 aaattaatat ttacaggatt ataggaaatt ataaaaaagc tgatgagaag gcattagagt
     3121 tattaaacgt attaccattt aaagatccta ctactctgcc aaaacctcag aaatctaata
     3181 tctctcaata tattgaacat tctaaaaata atgaaacttt agttatatgc ttttcaggca
     3241 tggatggtaa acgcactcaa aatcattata gaaattatgg gttacaatgt atagataaaa
     3301 ttgcttttaa ttctagtgat acttataatt atcaaggttt tgctaacaaa accataaaat
     3361 ataattttct cttactaaga gataattata acagttggta tcaaatacat acagattatt
     3421 atagaacgat cattgaaaac tatataaaat ctggcaatta taaaaaaata gtattagttg
     3481 gagcttcatc tggaggcttt gcagctatga tgtatggaca gttagtacat gccgacattg
     3541 tatatgttca agctcctcag acattagctt tcacaagcta ctcaacacaa tttaataaag
     3601 agctagagct tcaatataat ttaagttcta ctgcatatac aagtattgct aagcttcaaa
     3661 atcaatcaaa tggatttatt cccaaagtat atgttcaagt ttgtgaaaac aatggaattg
     3721 atatgttttc tatcaatatg cttaatactt ctgatcctaa tttatttgtt cacaaatata
     3781 aaaatgatac tcattctgtt catacaatta taggaaaatc aaaaatgttt caagacatat
     3841 gtagtataat agatgattta caaaaataat ttcttattga ataaaaattc aatcattaaa
     3901 ttagatctaa aaaatttatt tttaatcaag gattttaaaa atgcctaata ttaatttacc
     3961 aaccttcaat ataaaaatta gtaatagcct accctttaca ttatttggag gaattaatgt
     4021 cttagaagac ctagattcca ctttatttgc ctgtgaaaaa tatgttgaag taacggaaaa
     4081 attaaaaatc ccatatgtat ttaaagcatc ttttgataaa gccaatcgct cttcaattca
     4141 ttcttaccgc ggagtaggcc ttgaagaagg catgaacatc ttttctgcgg ttaaagaccg
     4201 ttttggtgtc cctgtgatta cagatgtgca tgagccatat caatgtaatg cagttgctga
     4261 agtagtggat attttgcaat taccggcctt tcttgcccgc caaactgatt tggtattcgc
     4321 catggctcaa accggtagag ttatcaacat taaaaaacct caatttctta gccctgaaca
     4381 gatgaaaaat attgtggaga aattcaaaga ggctggcaat gaccaattga tcttatgtga
     4441 acgtggcgct aattttggct atgataattt ggttgtcgat atgctgggct tcggtgtaat
     4501 gaagaaaact tgcgatgatt taccggttat ttttgatgta acacatgctc ttcaaaaacg
     4561 tgattcaggc tcctctgctt ccggtgggcg tcgtgagcaa gttttggatt tagcaatggc
     4621 cggcatggca actggtttag caggtttatt cttggaagct catccaaatc ctgataaagc
     4681 gcgttgtgat ggcccaagtg ctcttcctct agataaattg gaggatttct tgttacgtgt
     4741 gaaagctgtg gatgaaacag ttaaatcatt tcctaaattg gatattgctt aatgaatacc
     4801 gaaaatctga aaacggttat tgttgttcct gcacgctatg cttctactcg tttacccgga
     4861 aagcctttgg ctgatatctg cggtaaacca atgatccaac atgtctatga acgtgcttgt
     4921 aaagtaccct atattgatga tgtgatcgtt gctgttgatg atcgtcgtgt tgctgaagtt
     4981 gtagaatctt ttggtggcaa agttatcatg acttctactc aacatgattc tggtacagat
     5041 cggttagttg aagtaatggg aaaatatgct gctgatattt atattaatat ccaaggagat
     5101 gagccattaa ttcgatctga agatattgct ttgctcgctc aaggcatgaa ggatgagcaa
     5161 atctcagtgg gcaccctttg tcatgctcta cctgcttcag aagcaactaa tccaaatact
     5221 gtcaaagtcg tactatctgc aaacggtaat gcactttact ttagtcgtag ccctattcct
     5281 tatcctcgag ataaagagca tgcttattat ttcaaacata tcggcgttta tgcttatcgt
     5341 aaggaaactc tagcaaaata cagtaacctc aagcagcctg atatagagct aagtgagaaa
     5401 ctggaacagt tgcgtttatt agatgccggc atcgatattc gggtttttga agtacctgaa
     5461 acaggaccgg gtgtagatac accagaatgc ttagaacgtg tacgcgccat catgtcaggc
     5521 cagcttccta ttgataaaca ttcggtcaat ttagctgata ttcgtctcgt tattaccgac
     5581 gttgatggtg tactaacaga tggcggtatt ttctacaatg aaaatggaga atgtttaaaa
     5641 cgttttcatg tacgagatgg tttaggtatt agattgcttg aggaatcagg cattaaagta
     5701 gcggtattat caggaagaga ttctcccacc ctgcgaaaac gaattgatga tttaggtatt
     5761 tcttattatc aactcggcat taaagacaaa catgcggcat gtattgagtt aatgcaagaa
     5821 gctaattgtc ttaaagagca aacagcatat atcggtgatg acaccatcga tctacctgct
     5881 ttctccgctt gtggtttaag ttttgctgtc gcagatacgc ctgaatatat acgtaatcaa
     5941 gcagacataa ctttaacatt accaggaggc tatggggcat ttcgtgagtt agcagataaa
     6001 attcttgctg ctcagggcaa ggaggacgtt ttttcttcag aagctggatt tgctcaagtt
     6061 atgcatggtg ctaaccagta atcataaaaa aataatagga gttaataatg aaaactaact
     6121 ttctaaaatt ggcggttgaa accttacaat tagaagctaa tgccattatg gaaatgagta
     6181 agcgcttaga taatgaattt gagaaagcaa tagaaattat cttaaatact caaggtcgcg
     6241 tagttgtggt agggatggga aaatctggga ttatcggtca aaagcttgct gcaactatgg
     6301 cttctaccgg tacttctgct ttttttgtcc atcctggtga ggcatttcat ggcgatttag
     6361 ggatgattaa accaatagac gttgccttat taatttcaaa ttcgggagaa actgaggaaa
     6421 ttatccgaat tcttcctttt ctgaaagagc aaggcaataa aattattgcc atgaccggta
     6481 atattaaatc aactttagcc aaacatgctc attctttact ggatatcagt gtatcacgtg
     6541 aggcttgttc aaataatctt gcgccaacct catcaacaac ctgtacactt gcaatgggcg
     6601 atgcattggc aatggtttta caatctgaaa aaaaattctt gcccgaagat tttgctagat
     6661 ttcatcctgg tggcagctta ggccgccgtc tgttaacgcg tgtttcagat gtgatgaaaa
     6721 ccaaaattcc gcattgccta cccgatgctt cctttaaaga aattgtatat agtattaatc
     6781 gaggttacat ggggctaacc attggtaatg gagcatgata cgcttcatgg cattattact
     6841 gatggagatt tacgtcgtgc cttcgataga tttgataata tcaatcaaat taaagcaaaa
     6901 gacataatgt ctttatctcc taaatatgtt tctgctgatg cccgctttgc agaagctgaa
     6961 gcctatatgc atgctgaaaa aattgattca ttagtcgtaa aagagtccaa taaagtaatt
     7021 ggcgttttga atatttacga tattgatcat tattaaaaag ctaactgcta attacgaatt
     7081 atttcaaata taatgtaatt aactctaaac taaataaagt taaagaataa tgaaagtcct
     7141 cgttacgggc ggaaccggtt ttatcggttc acataccgcc atctcactaa ttaaagcagg
     7201 ttatgatgtt gtaattctcg ataatctgtg taattccagc atcaatattc tgccacgttt
     7261 aaaagaaatc accggtaagg acattacctt ttatcaaggc gatatccgtg atcgtgcttt
     7321 gctgcaaaag atttttgctg aacataagat tgaaacggta atgcattttg ccggcttaaa
     7381 agcagtgggt gaaagcaatg tcttaccgat gaagtattat gattacaatg tatcgggcag
     7441 cctgattttg gcggaagaaa tggccaaagc aggtgtattc agtatcgtat tcagttcgtc
     7501 agctaccgtt tacggcgatc cagcacgtac gccgattacg gaagatatgc cggtaggcgg
     7561 tacgaccaac ccatacggta catcgaaata catggtggag cggattctat cggatattca
     7621 aaaatcagat tcacgctgga gtgtgatttt actgcgttat ttcaatccgg ttggcgcaca
     7681 cgaaagtggt ttgattggcg aataccctaa cggtattcca aataatctgc tgccttatat
     7741 ctgccaagtg gcttcaggca agctgcctta tttgtcggta ttcggcgacg attaccccac
     7801 tccggacggt acaggtgtgc gcgattatat ccatgtggtt gatttggccg atggtcattt
     7861 gaaggccatg caagccaaag caaaagaatc gggcgtacat atttataact tgggcacggg
     7921 caacggttat tctgttttag atatggttaa ggcttttgaa gcagcttccg gcttggatat
     7981 tccttatcaa atcaaaccgc gtcgcgatgg cgatattgct gtttgctttg ccgatcctgc
     8041 gtttaccgaa tcacaaattg gctggaaagc gcaatttggt ttaagccaaa tgatggaaga
     8101 ctcatggcgc tgggtgagta ataatccgaa tggctatgat gattaagcca tgaaattaag
     8161 cggccgtctg aagtttcaga cggctttttg cttgcgattt atagtaaaat tcaccttatc
     8221 attttggcga ttaatattca tcatgaaaaa aatccttgtg accggcggtg ccggttttat
     8281 cggttcggcg gttgtgcgcc atatcatcaa cgatacgcaa gatgcggtgg taaatgtgga
     8341 taagctcact tatgcgggta atctggaatc gctggaatcc gtggccaatc atccgcgcta
     8401 tgcgtttgaa caagtcgata t
//
LOCUS       DAWKJW010000076         8407 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.076, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000076 DAWKJW010000000
VERSION     DAWKJW010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8407
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.076"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(308..1240)
                     /gene="cysK"
                     /locus_tag="WJJ54_001197"
     CDS             complement(308..1240)
                     /gene="cysK"
                     /locus_tag="WJJ54_001197"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEZ7342069.1"
                     /translation="MKIANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVK
                     DRIAEAMIEGAEKAGKINKNTVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKER
                     KMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTA
                     EEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGP
                     HPIQGIGAGFIPTVLNTKIYDSITKVSNEAAFETARAMAEKEGILVGISSGAAVWSAL
                     QLAKQPENEGKLIVVLLPSYGERYLSTPLFADLA"
     gene            complement(1434..2039)
                     /locus_tag="WJJ54_001198"
     CDS             complement(1434..2039)
                     /locus_tag="WJJ54_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342070.1"
                     /translation="MILLHLDFLSALLYAAVFLFLIFRAGMLQWFWASIMLWLGISVL
                     GAKLMPGIWGMTRAAPLFIPHFYLTLGSIFFFIGHWNRKTDGNGWQADPEHPLLGLFA
                     VSNVSMTLAFVGICALVHYCFSGTVQVFVFAALLKLYALKPVYWFVLQFVLMAVAYVH
                     RCGIDRQPPSTFGGSQLRLGGLTAALMQVSVLVLLLSEIGR"
     gene            complement(2036..2887)
                     /gene="dapF"
                     /locus_tag="WJJ54_001199"
     CDS             complement(2036..2887)
                     /gene="dapF"
                     /locus_tag="WJJ54_001199"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEZ7342071.1"
                     /translation="MNTLKFTKMHGLGNDFMVIDAVSQDFTPEDAPIAAWADRFRGVG
                     FDQLLVVGRSETEGVDFRYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVET
                     ANGVIFPKLSDNGMVTVNMGKPKFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSCV
                     NMGNPHAVIVVDDVECAPVRETGSLIEPHRQFPERVNVGFMQIVSRTAIRLRVFERGV
                     GETQACGTGACAAVVAGIRLGLLDEGKTVEVILPGGTLYIEWACGGDVMMTGPAETVF
                     EGELAYS"
     gene            3024..3320
                     /locus_tag="WJJ54_001200"
     CDS             3024..3320
                     /locus_tag="WJJ54_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342072.1"
                     /translation="MFRILLLLFPCAILAACTRNIPANPAVSNCAHLQNRTILYFDAH
                     GKPADGAVKGGFYKIIEIQGANCILIQDFNSTGNALGGSYVPDCRKSSLSPKNI"
     gene            3334..4002
                     /locus_tag="WJJ54_001201"
     CDS             3334..4002
                     /locus_tag="WJJ54_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ7342073.1"
                     /translation="MNHDITFLTLFLLGFFGGTHCIGMCGGLSSAFALQLPPHINRFW
                     LILLLNTGRVSSYTAIGLILGLIGQVGVSLDQTRVLQNILYTAANLLLLFLGLYLSGI
                     SSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLYALG
                     SGSAATGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSVSLWALWKLA
                     VLWL"
     gene            complement(4075..6195)
                     /gene="pnp"
                     /locus_tag="WJJ54_001202"
     CDS             complement(4075..6195)
                     /gene="pnp"
                     /locus_tag="WJJ54_001202"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEZ7342074.1"
                     /translation="MFDKHVKTFQYGNHTVTLETGEIARQAAAAVKVSMGDTVVLVAV
                     TTNKEVKEGQDFFPLTVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPL
                     FPEGFYHDIQIVAMVVSVDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYVNGV
                     YVLNPTKAELAKSQLDLVVAGTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQVAINA
                     INEFADEVNPEVWDWKAPETNEELVAKVRGIAGETIKEAFKIRQKQARSAKLDEAWSA
                     VKEALITEETDTLAANEIKGIFKHLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTGV
                     LPRTHGSALFTRGETQALAVATLGTSRDEQIIDALSGEYTDRFMLHYNFPPYSTGEVG
                     RMGAPKRREIGHGRLAKRALLAVLPKPEDFSYTMRVVSEITESNGSSSMASVCGGCLS
                     LLSAGVPLKAHVAGIAMGLILEGNKFAVLTDILGDEDHLGDMDFKVAGTTEGVTALQM
                     DIKIQGITKEIMQIALAQAKEARLHILDQMKAAVAGPQELSAHAPRLFTMKINQDKIR
                     EVIGKGGETIRSITAETGTEINIAEDGTITIAATTQEAGDAAKKRIEQITAEVEVGKV
                     YEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHERVRNVGDYLKVGQVVNVKALEVD
                     DRGRVRLSIKALLDAPAREENAAE"
     gene            complement(6432..7295)
                     /locus_tag="WJJ54_001203"
     CDS             complement(6432..7295)
                     /locus_tag="WJJ54_001203"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEZ7342075.1"
                     /translation="MSEIGLVKIYFGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPI
                     PSKGEILTQISNFWFKKLVHIMPNHFTGQTVYDVLPENEAKALEKRAVVAKKLTPVKV
                     EAIVRGYLAGSGWKDYQKTGSVCGIQLPEGMQEAQQLPEVIFTPSTKAAVGDHDENIS
                     FEECERIIGKELAAEVRAKAIQLYTEAAEYAKSRGIIICDTKFEFGLDTNGTLTLMDE
                     VLTPDSSRFWPADQYKVGTNPPSFDKQFVRDWLEQSGWNKKAPAPKVPADVIQKTVEK
                     YREALTLLTQD"
     gene            7494..8357
                     /gene="rfbD"
                     /locus_tag="WJJ54_001204"
     CDS             7494..8357
                     /gene="rfbD"
                     /locus_tag="WJJ54_001204"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HEZ7342076.1"
                     /translation="MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCN
                     MVKSFQPDAIVNTAAYTAVDKAEGDAAAAFAVNASAVYNLALSAHRAHARFIHISTDY
                     IFDGKGKRPYQESDFTNPSNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVR
                     TMLNLARERSPLSAVHNQIGCPTYAGDLAAAIIRLLQQTSPVRGIYHYAGGKSVSWYE
                     FAQHIFQAASQQQTSFPVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQ
                     KALAQVVSKLL"
BASE COUNT         2013 a         2419 c         1939 g         2036 t
ORIGIN      
        1 gtggattaac aaaaaccagt acagcgttgc ctcgccttgc cgtactatct gtactgtctg
       61 cggcttcatt gccttgtcct gatttttgtt aatccactat atctgtactg tctgcggctt
      121 cgttgccttg tcctgatttt tgttaatcca ctataaaaaa tatttccctc aagcaatgcg
      181 gcggcaccaa tgcctgatta aaacacaacc ggcgttttcg gcatatatgc aaaaacgcat
      241 tttccggcac ggcgttacac cgataccgaa aaatgcgtct gaatgtttcg acaatccgat
      301 taaagcatta tgccaaatct gcaaaaagtg gcgtagagag atagcgttcg ccataagaag
      361 gcagcagcac gactatcagc ttgccttcgt tttcaggctg tttggcaagc tgcaacgcac
      421 tccaaaccgc cgcaccggaa gaaataccca ccaaaatgcc ttctttttcc gccattgcgc
      481 gggcggtttc aaaagccgct tcgttcgaca ctttggtaat gctgtcgtaa attttggtat
      541 tcaaaacggt cggaataaag cctgcgccga tgccttgaat cgggtgcggg cctttttcgc
      601 cgccgctcaa tacgggtgaa gcttcaggct cgacggcaac cactttaact tcgggtttgt
      661 attttttcaa cacttcgccc acgccggtaa tcgtaccgcc cgtgccgacg ccggcaacga
      721 agacatcgac tttgccgtcc gtatcccgcc aaatttcctc ggcggttgtt ttgcggtgga
      781 cttcggggtt tgcctcattg tcgaactggc gcggcataaa ataagtgtcg ggatgcgcgt
      841 ccaccaagga tttcgctttg gcaatcgcgc ccgccatacc ttcggcggca ggggtcagaa
      901 tcagctccgc accaaacgcg cgcaacagca ttttgcgctc cttactcatg ctttccggca
      961 tggtaatcgc cagcttgtag ccgcgtgcgg cacataccat tgccaaaccg acacccgtat
     1021 tgccgctggt tgcttcgaca atgacggtgt ttttgttgat tttgcccgct ttttcggcac
     1081 cctcgatcat tgcttcggca atgcggtctt tgacgctgct gcctggattg aaaaattcca
     1141 gtttcacggc aacctccgcc ttcaaacctt cggtcagacg gttcagtttg accaaaggcg
     1201 tgttgccgat tagttcggtg atgctgtttg caattttcat cttctgctcc tgaataataa
     1261 ggtttcgaca gtaaggcgca atccccatag gcatcctgtc cgattgcagg ggatttgcgc
     1321 cgaaacataa acaaattttg gatatggctt tatcctaaac ctatgccgcc taaaaaacca
     1381 atatccaaaa tttctttctt tataactttt tgttccgata cggccgcacc gtattatctt
     1441 ccaatttctg aaagcagcag caccagtacc gagacctgca tcaacgctgc cgtcaacccg
     1501 ccgagtcgca gctgcgagcc gccgaacgtt gacggcggct gccggtctat accgcagcgg
     1561 tggacatagg caaccgccat cagcacaaac tgcaacacga accaataaac cggcttcagc
     1621 gcataaagtt tgagcagtgc cgcaaacaca aacacttgaa ccgttcccga aaagcaataa
     1681 tgcaccaacg cacatattcc gacaaaagca agcgtcatcg atacattact gacggcaaac
     1741 agcccgagca gaggatgttc ggggtctgcc tgccatccgt ttccatccgt tttccggttc
     1801 caatgcccga tgaaaaaaaa tatgctgccc aaagtcaggt aaaaatgggg gatgaacaag
     1861 ggcgcggcgc gggtcattcc ccatatgccg ggcatcagct ttgcccccaa aaccgatatg
     1921 cccagccaca gcataatact cgcccaaaac cattgcaaca ttcctgcgcg gaatatcaga
     1981 aacagaaaaa ccgccgcata cagtaaggca gacaaaaaat ccaaatgcag caaaatcatg
     2041 aatacgccaa ctcgccttca aacaccgttt ccgcagggcc ggtcatcatc acatcgccgc
     2101 cgcaggccca ttcgatatat aaagttccgc ccggcaaaat cacctctacc gttttccctt
     2161 catccaacaa ccccagacgg atacccgcca ccacagccgc acacgcgccc gtaccgcacg
     2221 cttgggtttc gcccacgccg cgctcgaaca cgcgcaaacg aatcgcggtt cggctgacaa
     2281 tctgcataaa gccgacgttg acgcgttcgg gaaactgcct gtgcggttcg ataagcgaac
     2341 cggtttcgcg caccggcgcg cattccacgt catcgaccac aatcaccgca tgggggttgc
     2401 ccatattgac gcagctgaca ggctgaatgc cggattcgag atgcaccccg taaatacagg
     2461 catcatcccc ctcgcccgat tcggggacaa acggtatttc agacggcata aacttcggtt
     2521 tgcccatatt gaccgtaacc ataccgttat cggacaattt cggaaaaata acgccatttg
     2581 ccgtttcaac acaaatttct ttcttatcgg tcaaaccctt gtctgcaaca aaacgggcaa
     2641 aacaacgcgc tccgttgccg cattgcccga cctcgctgcc gtcggcattg aaaatacggt
     2701 aacggaaatc cacgccttcg gtttccgaac gcccgaccac caaaagctgg tcgaagccca
     2761 cgccccggaa acggtccgcc catgccgcaa tcggcgcgtc ctcgggggta aaatcctgac
     2821 tgaccgcgtc aatcaccata aaatcgttgc ccaaaccgtg cattttggta aatttcaaag
     2881 tgttcatatt gttccgaaat cccgtatcgt ctgttgcttc cgaatccgaa atcccccgca
     2941 ccgaagggaa atgcttccat ctcccgccgc ctgaggatta aaatcagcca ttatactgtt
     3001 tgttacccct tacaagaaac accatgttcc gcatattact gttgcttttc ccttgtgcaa
     3061 tccttgccgc ctgcacccga aacataccgg caaacccggc cgtttcaaat tgcgcgcatc
     3121 ttcaaaaccg caccatcctg tattttgacg cacacggcaa acccgccgac ggcgcagtaa
     3181 agggcggatt ttacaaaatt atcgaaatac agggtgcaaa ctgcatcctt attcaagact
     3241 ttaacagcac gggcaatgcc ctcggcggat cctatgtgcc ggactgccgc aaatcatccc
     3301 tttcaccgaa aaatatctga cttcaaactg cctatgaacc acgacatcac tttcctcacc
     3361 ctgttcctac tcggtttctt cggcggaacg cactgcatcg gtatgtgcgg cggattaagc
     3421 agcgcgtttg cgctccaact ccccccgcat atcaaccgct tttggctgat cctgctgctt
     3481 aacacaggac gggtaagcag ctatacggca atcggcctga tactcggatt aatcggacag
     3541 gtcggcgttt cactcgacca aacccgcgtc ctgcagaata ttttatacac ggccgccaac
     3601 ctcctgctgc tctttttggg cttatacttg agcggtattt cttccttggc ggcaaaaatc
     3661 gagaaaatcg gcaaaccgat atggcggaac ctgaacccga tactcaaccg gctgttaccc
     3721 ataaaatcca tacccgcctg ccttgcggtc ggaatattat ggggctggct gccgtgcgga
     3781 ctggtttaca gcgcgtcgct ttacgcgctg ggaagcggta gtgcggcaac gggcgggtta
     3841 tatatgcttg cctttgcact gggtacgctg cccaatcttt tggcaatcgg cattttttcc
     3901 ctgcaactga aaaaaatcat gcaaaaccga tatatccgcc tgtgtacggg attatccgta
     3961 tcattatggg cattatggaa acttgccgtc ctgtggctgt aagccccatt cattcccgat
     4021 acccgtaaaa aataccgtct gaaacctgtt cagacggcac tttcacccta agcgttactc
     4081 ggcggcattt tcctcacggg caggcgcgtc cagcagggct ttgatggaca gacggacacg
     4141 gcctctgtcg tccacttcca atgctttcac gttcaccacc tgaccgactt tcaggtagtc
     4201 gccgacattg cgtacgcgct cgtgggcgat ttggctgatg tgtaccaaac cgtctttgcc
     4261 cggcatcacg ctgacaatcg cgccgacgtt gttgtcgagg attttcacca cagtgccttc
     4321 atacactttg cccacttcca cttcggcagt aatctgctcg atgcgttttt tcgccgcatc
     4381 gccggcttct tgagtggtcg cggcaatggt aatcgtaccg tcttcggcaa tattgatttc
     4441 cgtaccggtt tcagcggtaa tcgaacggat ggtttcgcca cctttaccga taacttcgcg
     4501 gattttgtct tggttgattt tcatcgtaaa caaacgcggc gcgtgtgcgg acaactcttg
     4561 cgggcccgca acggcggctt tcatctgatc caagatgtgc agacgcgctt ctttggcctg
     4621 tgccaaagcg atttgcataa tttctttggt aatgccttgg attttgatgt ccatttgcag
     4681 cgcggtaaca ccttcggtcg taccggccac tttaaagtcc atatcgccca agtggtcttc
     4741 gtcgcccaaa atgtcggtca ggacggcaaa tttgttgcct tccagaatca gacccatcgc
     4801 gataccggca acgtgtgctt tcaaaggcac gccggcagac agcaggctca aacagccgcc
     4861 gcagacggaa gccatagagg aagagccgtt agattcggta atttcggaga ccacgcgcat
     4921 ggtgtagctg aaatcttcag gtttcggcaa tacggccaac aatgcacgtt tagccaaacg
     4981 accgtgaccg atttcacggc gtttcggcgc gcccatgcgg cccacttcgc cggtagagta
     5041 cggcggaaag ttgtagtgca gcataaagcg gtcggtgtat tcgccggaca gcgcgtcgat
     5101 gatttgctcg tcgcgcgaag tacccaaagt cgctacggca agggcttggg tttcgccacg
     5161 ggtaaacaat gcggaaccgt gcgtgcgcgg caatacgccg gtttggatgt tcagcggacg
     5221 gacggtgcgg gtgtcgcggc cgtcgatgcg cggttggccg tccaaaattt ggctgcggac
     5281 gacatcggct tccaagtgtt tgaaaatgcc tttgatttcg ttggctgcca gcgtgtcggt
     5341 ttcttcggta atcaaggctt cttttaccgc actccaagct tcgtccaatt tggcagaacg
     5401 cgcttgtttt tgacggattt tgaacgcttc tttaatggtt tcgccggcaa tcccgcggac
     5461 tttggcaacc agttcctcat tggtttcagg tgctttccaa tcccaaactt ccggattgac
     5521 ttcgtcggca aattcattga ttgcattgat ggcaacctgc atttgatcgt ggccgtaaac
     5581 caccgcgccc agcatcacgt cttcgggcag gattttggct tcggattcca ccatcaacac
     5641 ggctttggaa gtaccggcga ccaccaagtc caattgcgat ttcgccaatt cggctttagt
     5701 cgggttcaaa acgtacacgc cgtttacata accgacgcgt gccgcgccga tcgggccggc
     5761 aaacggtacg ccgctcaaca ccagcgcggc agacgcgccc aacattgcag gaatatcaga
     5821 atcgatttca ggatcgacgg acacgaccat cgctacgatt tggatgtcgt ggtagaaacc
     5881 ttcagggaac agcggacgaa tcggacggtc gatcagacgg ctggtcagga tttctttttc
     5941 gctttgtttg ccttcgcgtt tgaagaaacc gccgggaatt ttgcctgcgg cgtaagtgcg
     6001 ctcgaggtaa tcgacagtca gagggaagaa gtcttggcct tctttcactt ctttgttggt
     6061 ggtaacggca accaaaacca cggtgtcgcc catagagact ttaacggcag cggcggcttg
     6121 gcgggcaatt tcgccggttt ccaaagtaac ggtgtggttg ccgtattgga aagttttaac
     6181 gtgtttgtcg aacattattg ttcctttcaa aataccgcac tgctaaaaca ctaataatgc
     6241 acactaaaat ccgaatgtgc atagttaggg tttcagaccg tgcggcaggt tgtaaacaag
     6301 ctttcagacg acatttcgga cgctgaaagc aattccaaat tataaaggca accatcatta
     6361 aaatccagta ttgatacaat aaaaaggccg tctgaaccat atttctttca gacggccttc
     6421 aaacttaaaa atcaatcctg agtcagcaaa gtcaatgctt cccgatactt ctcgacagtt
     6481 ttctgaatca catcggcagg cactttcggc gcaggggctt ttttgttcca accgctttgt
     6541 tccagccagt cgcggacgaa ttgtttgtca aaagacggcg gattggtgcc gactttgtat
     6601 tggtcggcag gccaaaaacg gctcgaatcg ggagtcaata cctcatccat cagcgtcagc
     6661 gtaccgtttg tatccaaacc gaattcaaat ttggtatcgc aaatgatgat gccgcgcgat
     6721 ttggcatatt ccgccgcttc tgtataaagc tgaatcgctt tggcgcgcac ttccgccgcc
     6781 aattcttttc cgataatgcg ttcgcattct tcaaagctga tgttttcatc gtgatcgccg
     6841 actgcggctt tggttgaggg cgtaaaaatc acttcaggca gttgttgcgc ttcctgcata
     6901 ccttcaggca gttgaatacc gcaaaccgag ccggtttttt gataatcttt ccaaccgctg
     6961 cctgccagat aaccacgcac aatcgcctct actttcaccg gagtgagctt tttagccacg
     7021 acggcgcgtt tctctaaagc tttggcttcg ttttcaggca aaacatcgta aaccgtttga
     7081 ccggtaaagt ggttgggcat aatatgcacc agttttttaa accaaaaatt ggaaatctgc
     7141 gtcagaatct cccctttgct cggaatcggg tcgtccaaaa tcacatcgaa tgcagacagg
     7201 cggtcggaag cgaccatcag catacgttta tcgtcgattt catataaatc gcgcactttt
     7261 ccaaaataga tctttaccaa accaatctca ctcatttcgc cccccctgaa aatatcttga
     7321 aaataccgac ccgacacccg acaggtttga atcacaaacc aatattctag ccgaagtcgg
     7381 cgcaaaacaa tacccatggc acaaaaaacc aacccgtcaa ccgtcggcaa agttttggca
     7441 ctataatacc gacagcaagt cctacaatac acttttacca aaggaaatac ctcatgagaa
     7501 tcctattgac aggctcgaaa agccaactgg cacgctgcct gcgcgaccgt cttccggaag
     7561 actgggaaac cattgcgacg gattccgcat ccctagacat taccgatgcc gatgccgtct
     7621 gcaacatggt caaaagtttc caacccgacg ccattgtcaa cacggctgcc tatactgccg
     7681 tcgacaaagc ggaaggcgat gcggcagcgg catttgccgt caatgcttcc gccgtttaca
     7741 accttgcctt gtcagcacat cgcgcccatg cccgattcat ccacatctca accgactata
     7801 tctttgacgg taaagggaaa agaccctatc aggaaagcga ctttaccaat ccttccaatg
     7861 tatacggaca atccaaaacc gcaggcgagc tgctcgcact gtctgccaat cccgacagcc
     7921 ttatcctgcg gacttcttgg ctgtttagcg aatacgggga caactttgtc cgcacgatgc
     7981 tgaaccttgc acgggaacgt tccccgctgt ccgccgtcca caaccaaatc ggctgcccga
     8041 cctatgccgg cgatttagct gccgccatca tccgcctttt gcagcaaacg tcgcccgtgc
     8101 gcggcattta ccactacgcc ggcggcaaat ccgtatcctg gtacgaattt gcccaacata
     8161 ttttccaagc ggcatcgcaa cagcagacat ccttccccgt tcccgaattg actgccgttt
     8221 cagacaagga atatccgacc gccgccccca ggcccgcata cagcattttg gactgccgca
     8281 aaatcgaaaa cgacttcagc atcaaaccgt cagactggca aaaagccctt gcacaggtcg
     8341 tttccaagct gctctgatgc cgcccgcctc tccgtttccg ccgtcaagca ccgccttggc
     8401 ggttttc
//
LOCUS       DAWKJW010000077         8316 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.077, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000077 DAWKJW010000000
VERSION     DAWKJW010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8316)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8316)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8316
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.077"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(266..1651)
                     /gene="pntB"
                     /locus_tag="WJJ54_001205"
     CDS             complement(266..1651)
                     /gene="pntB"
                     /locus_tag="WJJ54_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HEZ7342077.1"
                     /translation="MSSGLVTAAYIVAAILFIFSLAGLSKQETAKQGCYSGIAGMAVA
                     LFVTVFSDNTHGLGWIIIAMLIGAAIGIYKAKKVEMTEMPELIALLHSFVGLAAVLVG
                     FNSYIAPGSVSHDMHTIHLVEVYLGIFIGAVTFTGSLVAFGKLNGKISSSPLQLPAKH
                     KLNALALGVSFVLLLVFVGIDGSGFILLIMTLIALAFGWHLVASIGGADMPVVVSMLN
                     SYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFVSVIAGGFGSDSG
                     TSSSGSQEIGEYREVKAADVAEMLKGANSVIITPGYGMAVAQAQYPVAEITELLRKNG
                     TEVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFPETDVVLVIGANDTVN
                     PAAQTDPNRPIAGMPVLEVWKAKEVVVFKRSMNTGYAGVQNPLFFNENSVMCFGDAKK
                     TVDDILSELKK"
     gene            complement(1717..2100)
                     /locus_tag="WJJ54_001206"
     CDS             complement(1717..2100)
                     /locus_tag="WJJ54_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HEZ7342078.1"
                     /translation="MTFAYWCILIAYLLPLFCAAYAKKAGGFRFKDNHNPRDFLAHTQ
                     GAAARAHAAQQNGFEAFAPFAAAVLTAHATGNAGQATVNTLAGLFILFRLAFIWCYIA
                     DKAALRSLMWAGGFACTVGLFVAAA"
     gene            complement(2104..3645)
                     /locus_tag="WJJ54_001207"
     CDS             complement(2104..3645)
                     /locus_tag="WJJ54_001207"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEZ7342079.1"
                     /translation="MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAAS
                     LDDAAYQTAGATVADKAAVWACPLIYKVNAPSEGELPLLNEGQTIVSFLWPRQNEALV
                     EALRAKKVNALAMDMVPRISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAA
                     GKVPPAQVLVIGAGVAGLAAIGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQ
                     ESGGSGDGYAKVMSDEFIAAEMKLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESM
                     KSGSVIVDLAAATGGNCELTRPGELSVTDNGVKIIGYTDMANRLAGQSSQLYATNLVN
                     LTKLLSPNKDGEITLDFEDVIIRNMTVTHDGEITFPPPPIQVSAQPQQTPSEKAASAA
                     KPEPKPVSLWKKLAPAVIAAVLVLWVGAVAPAAFLNHFIVFVLACVIGYYVVWNVSHS
                     LHTPLMSVTNAISGIIVVGALLQIGQGNGFVSLLSFVAILIASINIFGGFAVTRRMLN
                     MFKKG"
     gene            3935..4768
                     /gene="serB"
                     /locus_tag="WJJ54_001208"
     CDS             3935..4768
                     /gene="serB"
                     /locus_tag="WJJ54_001208"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEZ7342080.1"
                     /translation="MPQALVLQFPSAEALPSDFPSRLPEPDCADEKRMRFIVEEGFSL
                     SEADAALLGSRQIDHAVLPDMDFGELGLIVSDMDSTLITIECVDEIAAGVGLKDKVAE
                     ITERSMRGELDFEQSLRSRVALLAGLDEQILADVYENVLKLSPGAEFLLDECKRHDVK
                     FLLVSGGFTFFTERLQQRLGFEYQHANVLEIENGRLTGRLKGRIIDAQAKADLLREYR
                     SRLGLQPHQVLAMGDGANDIPMLKETGIGVAYRAKPKVRAAADVCINFGGLERVRGLF
                     G"
     gene            4832..6054
                     /locus_tag="WJJ54_001209"
                     /pseudo
     CDS             4832..6054
                     /locus_tag="WJJ54_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360679.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
     gene            6215..7795
                     /gene="purH"
                     /locus_tag="WJJ54_001210"
     CDS             6215..7795
                     /gene="purH"
                     /locus_tag="WJJ54_001210"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEZ7342081.1"
                     /translation="MSVIKRALISLSDKAGAVEFAQTLTKLGVEILSTGGTAKLLADA
                     GVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLGEHVAKMEEHGIGNIDLVCV
                     NLYPFAATIAKPNCILEDAIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAIAAELE
                     ANNGALSDKTRFNLSRKAFSHTAQYDGMISNYLTSLSDDILSGTPEIGEFPSQFNQSW
                     IKVQDMRYGENPHQRAAFYRDIDPAAGSLSAYKQLQGKELSYNNIADADAAWEAVKSF
                     DAPACVIVKHANPCGVAVAADTLTAYKLAYVTDTTSAFGGIIAFNREVDGETVKQITD
                     NQFMEVLMAPKFTAEALEIAAAKKNVRVLEVPLEAGANRFELKRVGGGLLVQTPDICR
                     ISRADLKVVSKRQPTEQEWNDLLFVWNVAKYVKSNAIVFGKGGQTYGIGAGQMSRVDS
                     TRIAARKAQDANLDLNGACAASDAFFPFRDGVDVIAEQGIKAIIHPAGSMRDQEVFDA
                     ADEHGIAMVVTDVRHFRH"
BASE COUNT         1854 a         2283 c         2349 g         1830 t
ORIGIN      
        1 caagtggaaa aatacttggc agattatcag gcacacttgg aaaaagtgtt cggctaatta
       61 aaaatccatc ttcaacacgg agatggattt tgtttgtttc gttgattttg tgtcagtttc
      121 agatgtaggt gcttattcgg acgggccgtc tgaaaatgtt tgccccaatg caaaaaaaat
      181 cactgcaaac cttcataaac ggggtttgca gtgatttttt caaatcaaac agattgaaaa
      241 cctgcgccga attgttcaga cggcattatt ttttcagttc ggacagaatg tcatccacgg
      301 ttttcttcgc atctccgaaa cacattacgc tgttttcgtt gaagaacagc gggttttgta
      361 cacctgcgta gccggtattc atcgagcgtt tgaagacgac gacttctttt gccttccata
      421 cttccaacac gggcataccc gcaatcgggc ggttcgggtc ggtttgggcg gcaggattga
      481 cggtatcgtt cgcaccaatc accaagacca catcggtttc ggggaagtcg tcgttgattt
      541 cgtccatttc caacacgatg tcgtagggga ctttggcttc ggcaagcagt acgttcatat
      601 gaccgggcag gcggccggcg acggggtgga tgccgaagcg cacttctgtg ccgtttttac
      661 gcaaaagctc ggtgatttcg gcaacggggt attgcgcttg tgcgactgcc ataccgtagc
      721 ccggggtaat gatgacactg tttgcgcctt tcagcatttc ggcaacatcg gcagctttga
      781 cttctcggta ttcccctatc tcttggctgc cggaagatga tgtgccgctg tcgctgccga
      841 aaccgccggc gattaccgag acaaacgacc ggttcatggc tttgcacata atgtaggaca
      901 gaatcgcgcc gcttgagccg accaacgcgc cggtaacgat gagcaggtcg ttggagagca
      961 taaagcctgc cgctgcggcc gcccagccgg agtaggagtt gagcatggac acgaccacgg
     1021 gcatatctgc gccgccgatg gaggcaacca agtgccagcc gaatgcgagg gcaatcaggg
     1081 tcataatcag caggatgaag ccgctgccgt caatgccgac gaatacgagc agcaacacaa
     1141 acgatacgcc aagtgccagt gcgttgagct tgtgtttggc gggcagttgc agcgggctgc
     1201 tgctgatttt gccgttgagt ttgccgaatg cgaccagcga gccggtaaag gttaccgcgc
     1261 cgatgaagat gcctaaatac acttcgacca gatggatggt gtgcatatcg tgcgaaacgc
     1321 tgcccggcgc gatatagctg ttgaagccga ccaaaaccgc cgctaggccg acgaagctgt
     1381 gcagcagggc aatcagttcg ggcatttcgg tcatttccac ctttttggct ttgtagatgc
     1441 cgattgccgc gccgatgagc atggcgatga tgatccagcc cagtccgtgg gtattgtcgg
     1501 aaaaaacagt tacaaaaagg gcgaccgcca taccggcgat accggaatag cagccctgtt
     1561 tggcggtttc ctgtttggac agccccgcca gtgagaagat gaataaaatt gcggcaacga
     1621 tatacgccgc tgttacgagt cctgaagaca tggaaattct ccgattttcg atgatttgtt
     1681 ttcaatgccg tccgaactgt tcagacggca tctgtttcaa gcagccgcga caaacagccc
     1741 gacggtgcag gcaaatccgc ccgcccacat cagcgagcgc aatgctgctt tgtctgcgat
     1801 gtagcaccag ataaaggcga ggcggaacag gatgaacagg ccggcaagcg tgttgacggt
     1861 tgcttgtccg gcattgccgg ttgcgtgtgc cgtcaaaacg gcggcggcaa acggtgcaaa
     1921 agcttcaaaa ccgttttgct gcgcagcgtg ggcacgggcg gctgcgcctt gcgtgtgcgc
     1981 cagaaaatcg cgcggattgt ggttgtcttt aaaccggaat ccgcccgctt ttttggcata
     2041 cgccgcacaa aaaagcggca ataggtaggc aatcagaatg caccaatagg cgaaagtcat
     2101 ggcttaccct ttcttaaaca tattcagcat acgccgtgtt accgcaaagc cgccgaagat
     2161 gttgatgctg gcaatcagga tggcaacaaa cgacagcagc gaaacaaagc cgttgccctg
     2221 accgatttgc agcagcgcgc cgacgacgat gatgccggag atggcattgg ttaccgacat
     2281 cagcggtgtg tgcagcgagt ggctgacgtt ccaaacgaca tagtagccga tgacgcaggc
     2341 gaggacgaac acgataaagt ggttcaggaa tgctgcgggt gcgaccgcgc cgacccacag
     2401 caccaatacg gcggcgatga cggcgggcgc gagttttttc cacagggaaa caggtttcgg
     2461 ctcgggcttg gcggcagacg cggctttttc agacggcgtt tgctgcggct gggcggaaac
     2521 ttgaatcggc ggaggcggga aggtgatttc gccgtcgtgg gtaacggtca tgttgcggat
     2581 aatcacgtct tcgaagtcca gcgtgatttc gccgtctttg ttcgggctta acagcttggt
     2641 caggttaacc aagttggtgg cgtaaagttg ggaagactgt ccggcaaggc ggtttgccat
     2701 gtcggtgtaa ccgatgattt tcacgccgtt gtcggttacg gacaattcgc ccgggcgggt
     2761 gagttcgcag ttgccgcccg tcgccgccgc caaatcgacg atgacggagc cggatttcat
     2821 gctttcgacc atttctttgg taatcagctt gggcgcgggt ttgcccggaa tggcggcggt
     2881 ggtgatgatg atgtccactt ctttcgcctg ttcggcaaat agcttcatct cggcggcgat
     2941 aaattcgtcg ctcatcactt tggcgtagcc gtcgccgctg ccgcccgatt cttgcgggaa
     3001 gtcgagtttc aggaacttgc cgcccatcga ttcgatttgt tccgccactt ccaagcgggt
     3061 atcgaatgcg cgcaccactg cgccgagcga gtttgccgta ccgattgccg ccagacccgc
     3121 cacacctgcg ccaatcacca aaacctgcgc gggcggcact ttgccggcgg cggtgatttg
     3181 accggtgaag aaacggccga aggcgttggc ggcttcaatc acggcgcggt agccgctgat
     3241 gtttgccatc gaagacaaag cgtccaaagc ctgcgcgcgg gaaatacggg gcaccatgtc
     3301 catcgccagc gcattgactt tcttggcgcg caaggcttcg accaaagcct cgttttggcg
     3361 cggccacagg aagctgacga tggtttgacc ttcgttcaaa agcggcagct cgccttcgga
     3421 cggcgcgtta accttataaa tcaaagggca ggcccaaacc gccgctttgt cggcaacggt
     3481 tgcgcctgct gtttggtaag cggcatcgtc caaacttgcc gccaaacctg caccgctttc
     3541 gacaacggtt tcaaagccca gtttgcccag cagggcgacg gtggcgggcg tacaggcgac
     3601 gcgggtttcg ccggataatg actcgcgtgg gatgccgatt ttcatctctg aatccttttt
     3661 cgggttgttt atatgtatcg tgggttaaat ttaaatcggg gcagggcgga gcaacgccgt
     3721 accagtttaa aaccgattca cttcaaatgt taatatattt tagataatcc ccttataacg
     3781 aattttcatc aggctggcaa tagttgcggc attttcccgt gttgtccgac acatactgcc
     3841 gtttgttttt gaagccgttt tccgattgca gtcccgcccg ccgtaacatt ctttgccgtt
     3901 tcactatata atccgcattt tttgagccac cgccatgccg caagccctcg tcctccaatt
     3961 tccctccgcc gaagccctgc cttccgactt cccctcccgc ctgcccgaac ctgattgcgc
     4021 cgatgaaaag cgtatgcgtt ttattgttga agaagggttt tctttaagcg aggcggacgc
     4081 ggcgttgctt ggcagccgtc aaatcgacca cgccgtgttg ccggatatgg attttggcga
     4141 actcggtttg attgtcagcg atatggattc gacgctgatt accatcgaat gcgtcgatga
     4201 aattgcggca ggcgtgggtt taaaagacaa ggtagcggaa attaccgagc gttcgatgcg
     4261 cggagagttg gatttcgagc agtcgttgcg cagccgcgtt gcgctgttgg cgggattgga
     4321 cgaacagatt ttggcggacg tttatgaaaa cgttttgaag ctctcgcccg gtgcggaatt
     4381 tttgttggac gaatgcaaaa ggcacgatgt gaaattcctg ctggtgtccg gcggcttcac
     4441 gttttttacc gaacgtctgc aacaacgcct cggcttcgaa taccaacacg ccaatgtttt
     4501 ggaaattgaa aacggcaggt tgaccggccg tctgaaaggc agaatcatcg acgcgcaggc
     4561 aaaggcggat ttattgcgcg aataccgcag ccgcctcgga ttgcagccac atcaggtgtt
     4621 ggcgatgggc gacggtgcga acgatattcc gatgctcaaa gaaacgggca taggcgtggc
     4681 ttaccgtgcc aaaccgaaag tgcgggcagc cgccgatgtc tgtatcaact tcggcggttt
     4741 ggagcgtgta cgcggcctgt tcggataggc ggataggaaa cggatgtcgt ccgaaaggtt
     4801 ttcagacggc atttgaacgg caggaacgac agtgggacgc agaaaacttt ggtttgccct
     4861 ggcagcagca ggcgttatcg gcggtttggt cggcattgtg ctgacggaac tgatgcactt
     4921 catacagcat acggcaacgg ttatggcgcg gacggcgtgt acacttcgtt ccgcgaaggc
     4981 gtggcacagg cttccggtat gcggcgcgtt gccgtgctga cgctgtgcgg cgcggtcgca
     5041 ggcagcggct ggtggttgct gaaacgtttc ggcaagccgc aaatcgaaat caaagccgcc
     5101 ttgaaacagc cgttgcaggg gctgccgttt ctgacgacgg ttttccatgt tctgctgcaa
     5161 atcataacgg tcggactcgg ttcaccgctc ggacgggaag tcgccccgcg tgaaatgact
     5221 gccgcgttcg cttttgccgg cggcaggcgg ttgggtttgg atgaagacga aatgcggctg
     5281 ctgattgctt gcgcttcggg tgcgggtttg gcggccgtgt ataacgtgcc gctcgcctcc
     5341 acacttttta tcctcgaagc catgctgggc gtgtggacgc agcaagccgt cgccgccgca
     5401 ttgctgactt ccgtcatcgc caccgccgtc gcgcgcatcg gcttaggcga cgtgcagcaa
     5461 tatcatcccg ccaaccttgc cgtaaacact tcattacttt ggttttccgc cgtcatcggc
     5521 ccgatactgg gcgcaaccgc cgtctttttc cagcgcaccg cccaaaaatt ccccttcatc
     5581 aagcgcgaca acatcaaaat cattcccttg gcagtctgca tgtttgcgct catcggcgtg
     5641 attgccgttt ggtttcccga aattttgggc aacggcaaag caggcaacca actgaccttt
     5701 ggcggtttga ccggttggca acacagcctt gagctgaccg ccgtcaaatg gctggttgtc
     5761 ttgatggcgt tggcggcagg cgcatacggc ggactgatta cgccgtctat gatgctcggc
     5821 agcaccattt cttttgcagc cgccgccgcg tggaacagcg ttttccccga aatgccgtct
     5881 ggaagcgcgg cagtcgtcgg agcggcggtg tttctcggcg tatcgctcaa aatgccgctg
     5941 accgccattg tgttcgtatt ggaactgacc tacgcgccgc tgtccctgct gctgcctttg
     6001 tgcatcggca tggcgggggc attgggaaca tcgggaaaaa tgggcttcaa ataaatgccg
     6061 acaaatgccg tctgaaaggt tttcagacgg catttctttg taaattgtca gcaatatctg
     6121 caaaaaccta ctgccaaaaa actagaaata gcggataata ccgccccgaa aaagttcccc
     6181 tttccccatc caactgtcag aaaaggaagc cccaatgtcc gtcatcaaac gcgccctgat
     6241 cagcctgtcc gacaaggcag gcgcggtcga atttgcccaa accctgacca agctcggtgt
     6301 cgaaatcctc tccaccggcg gcacggcgaa actgcttgcc gatgcgggcg ttcccgtgat
     6361 tgaagtcgcc gactataccg gcttccccga aatgctcgac ggccgcgtga aaacgctgca
     6421 tccgaaaatc cacggcggta ttttgggtcg gcgcgatttg ggcgaacacg tcgccaagat
     6481 ggaagaacac ggcatcggca atatcgacct tgtgtgcgtc aacctttatc ccttcgccgc
     6541 caccatcgcc aaaccaaact gcatactgga agacgcgatt gaaaacatcg acatcggcgg
     6601 cccgaccatg gtgcgttctg ccgcaaaaaa ctggaaacac gtcgccatcg ttaccgacac
     6661 cgccgacttc cccgccatcg ccgccgaact cgaagccaac aacggcgcgt tgagcgacaa
     6721 aacccgcttc aacctgtcgc gcaaagcgtt cagccacacc gcccaatacg acggcatgat
     6781 ttccaactac ctgacctcgc tttcagacga catcttgagc ggcacgcccg aaatcggtga
     6841 attcccgagc cagttcaacc aaagctggat taaagtgcaa gacatgcgct acggcgaaaa
     6901 cccgcatcag cgcgccgcgt tctaccgcga tattgacccc gccgcaggca gcctttccgc
     6961 ctacaaacaa ctgcaaggca aagaattgtc ttacaacaac atcgccgatg ccgatgccgc
     7021 atgggaagcc gtcaaatcct ttgacgcgcc agcctgcgtg atcgtcaaac acgccaatcc
     7081 gtgcggcgtc gccgttgcag ccgatacatt gaccgcctac aaactcgcct acgtcaccga
     7141 caccaccagc gcgttcggcg gcatcatcgc cttcaaccgc gaagtggacg gcgaaaccgt
     7201 caaacagatt accgacaacc agtttatgga agtcttgatg gcgccgaagt ttaccgccga
     7261 agccctcgaa atcgccgccg ccaagaaaaa cgtgcgcgta ttggaagtgc cgcttgaggc
     7321 aggcgcaaac cgcttcgaac tcaaacgcgt cggcggcgga ctgttggtac aaacgcccga
     7381 catctgccgc atcagccgcg ccgatttgaa agtcgtctcc aaacgccaac cgaccgagca
     7441 ggaatggaac gatttgctgt ttgtctggaa cgtcgccaaa tacgtcaaat ccaacgccat
     7501 cgtcttcggc aaaggcggtc aaacctacgg catcggcgca ggtcaaatga gccgcgtgga
     7561 cagcactcgc atcgccgctc gcaaagcgca agatgccaat ctcgacctca atggcgcatg
     7621 tgccgcttcc gatgctttct tccccttccg cgacggcgta gatgtcattg ccgagcaggg
     7681 catcaaagcc atcatccatc cggcaggctc catgcgcgat caggaagtct tcgacgcagc
     7741 ggacgaacac ggcatcgcca tggtcgtaac cgacgtgcgc cacttccgcc attaacgcag
     7801 atgaacaagg caatgccgtc tgaagggctt tcagacggca ttttgcgcta ttttgtgaag
     7861 gtagggatga cggttcgggt attcctgaca gggtggattt tcaaggtgtt gtatagggtg
     7921 taggaggatt cgtaaaaggt gggatgcagg gtgtgcttca gcccgctgca tcaaaaattt
     7981 ttggagaacc ggcgggagtc ggcggttttg gtttcggcgg ggacggtgga aatgggtaac
     8041 attgacggaa tcgacggaag cggtgggctg aagcccaccc ttgtatattg gaatcactgt
     8101 atcatagcaa caaaccgccc ggccgccacc cgcgcccacc caaggcacac aaccgttgcg
     8161 tagcacaggg agcggcaggg caacccatcg acacaaccgg acagttgccg gacaacacaa
     8221 ccgaatgcaa ggcaggttta tgatgagtac ccaataccat tacgcaggta tagtgaatta
     8281 aatctaaacc agtacagcgt tggttcgcct tagctc
//
LOCUS       DAWKJW010000078         8257 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.078, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000078 DAWKJW010000000
VERSION     DAWKJW010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8257)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8257)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8257
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.078"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(234..962)
                     /gene="rmpM"
                     /locus_tag="WJJ54_001211"
     CDS             complement(234..962)
                     /gene="rmpM"
                     /locus_tag="WJJ54_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding outer membrane protein
                     RmpM"
                     /protein_id="HEZ7342082.1"
                     /translation="MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNY
                     GECWKNAYFDKASQGRVECGDAVAAPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAK
                     TLFGFDKDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTDFMGSDKYNQALSERRAYV
                     VANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPD
                     RRVDVKIRSIVTRQVVPAHNHHQH"
     gene            1326..2276
                     /locus_tag="WJJ54_001212"
     CDS             1326..2276
                     /locus_tag="WJJ54_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HEZ7342083.1"
                     /translation="MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEI
                     GIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHT
                     QARYALPLIVADFVKRYPKVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGK
                     LPCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLE
                     QPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIAL
                     RSDTYLRGYAYDFIQAFAPHLTREKVDRILYTPISEDFSI"
     gene            complement(2389..3123)
                     /gene="fnr"
                     /locus_tag="WJJ54_001213"
     CDS             complement(2389..3123)
                     /gene="fnr"
                     /locus_tag="WJJ54_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HEZ7342084.1"
                     /translation="MASHNTTHQMKTLCSSCSLRELCLPVGLLPNELSQLDAVIRQSR
                     RLKKGEYLFCVGEAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHV
                     HSCDAVALEDSEVCELPFTHIEELGQNIPSLRTHFFRMMSREIVRDQGVMLLLGNMRA
                     EERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLI
                     SVEHKHIKILNLQVLKKMVSGCSHAI"
     gene            3328..4749
                     /gene="hemN"
                     /locus_tag="WJJ54_001214"
     CDS             3328..4749
                     /gene="hemN"
                     /locus_tag="WJJ54_001214"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEZ7342085.1"
                     /translation="MKIIQIQNKHNVNDDRPEFDRALIASLPASGPRYTSYPTADRFH
                     DGFREGEYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIE
                     YLEKEMELLAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSI
                     EIDPRKVSRDTVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAG
                     FKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPHVFKPQRRIDTVAV
                     PDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYAD
                     CDLVAIGVSSIGKIGSTYSQNERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQD
                     LMCRFALDYRIYESMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIR
                     NIAMVFDYHLRHKETKAKYSQTV"
     gene            complement(5102..6676)
                     /locus_tag="WJJ54_001215"
     CDS             complement(5102..6676)
                     /locus_tag="WJJ54_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEZ7342086.1"
                     /translation="MAQIQMSANVKTINAVFAAMLVGTVGYFIYWGLGYTHYNYAALF
                     IIATMFGVFMAFNIGGNDVANSFGTSVGAGTLTIPQALLIAAVFEVSGAVIAGGEVTN
                     TIRKGIVDLKGVDFEPIQFVFIMMSALLAAALWLLFASKKGLPVSTTHSIIGGIVGSA
                     VCMAVMNDAASGDLIRWGKLGGIGVSWVLSPVLGGAVSYFLFSRVKKNVLDYNAWAEG
                     TLKGIKQEKKAYKERHRLFFEGLSEAEKVEYATKMAHDAQIYDEPEFDPQELQSEYYR
                     GLYAFDNRKNNVDSYKALHSWIPFIASFGAMMISAMLIFKGLKNLHLGMSNVNSFLTI
                     FMIGAAVWMGTFVFAKSLKRKDLGKSTFQMFSWMQVFTACGFAFSHGANDIANAIGPF
                     AAIMDVLRTNSVAAQNVVPPIAMLTFGIALIVGLWFVGKEVIKTVGTSLAEMHPASGF
                     TAELSAASVVMGASLMGLPVSSTHILVGAVLGIGLVNRNANWKLMKPIGLAWVITLPA
                     AAVLSVVCYLVLQAVF"
     gene            7001..8101
                     /locus_tag="WJJ54_001216"
     CDS             7001..8101
                     /locus_tag="WJJ54_001216"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEZ7342087.1"
                     /translation="METQLYIGIMSGTSMDGADAVLVRMDGGKWLGAEGHAFTPYPGR
                     LRRKLLDLQDTGADELHRSRMLSQELSRLYAQTVGELLNKQNLAPSDITALGCHGQTV
                     RHAPEHGYSIQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRE
                     TRAVLNIGGIANISVLPPDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNI
                     LPQLLDRLLAHPYFAQPHPKSTGRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVF
                     DAVSHAAADTRQMYICGGGIRNPVLMADLAECFGTRVSLHSTAELNLDPQWVEAAAFA
                     WLAACWINRIPGSPHKATGASKPCILGAGYYY"
BASE COUNT         2096 a         2322 c         2006 g         1833 t
ORIGIN      
        1 acggcaatgg gacacaaacc tgaatctgaa tctgaatcta aatctgaatc cgaatccgaa
       61 cctgcacctc gattctgacg atagccgttt cagaaaacca cccaaaaaaa caaaccccgc
      121 aaaagcgggg gtttgtttca catcatcgat gccgaccgac gtttcacgaa tattgcaaca
      181 gtacctggta caaaatccac taacctcatg catcggcaag atattgccta gccttagtgt
      241 tggtgatgat tgtgtgccgg cacaacctga cgggttacga tgctgcggat tttcacatcc
      301 acacggcggt caggttcgat acatgcaatc agagcctcac gttttttggc tttagagact
      361 ttcgcaccca gtttggcaac ttcggcttca caaacttgag tcatttgcgc ttgagattcg
      421 cccaagccga cagcagaaat tctagaaaca ggtacgccgt tgctgaccag gttgtttgcc
      481 actacgtatg cgcggcgttc ggacagggcc tgattgtatt tgtcagaacc cataaagtcg
      541 gtatggcctt cgacgcggac agattggaca ttggttcgac tcaggcgttg cgccaatact
      601 ttcaggttgt cttgagcttc ggcgcgcaat gaatccttat cgaaaccgaa cagggttttg
      661 gcagacaggg aaatggtttc atcaacatat tgcggagcct gctccacaac gacgacaggc
      721 gcgggtgcgg gttcgggttc tggctcgggt tcgggggcag caaccgcatc gccgcattct
      781 acgcgacctt ggcttgcttt atcaaagtag gcgtttttcc agcattcgcc atagttgttg
      841 cgtacgattt cgttcgactg gccgcttacg gtgtaaccct gaacggacgc ctcgcccgca
      901 acagcagtgc cggaagcgag caatgcaacg aataatgcgc ttaatttcag ctgtttggtc
      961 attttattcc ctcattaaat ttgtacagca gatacagaag caactgctga attgccaaca
     1021 tacaggccgc tgtagaaaca tggcggcaaa tcggatattt cagtctccac tataaagaag
     1081 cagggggagg actgtcaata ctcaacgcct gaaaacaacc gtaaaacagc ctgtttcctg
     1141 atagtctatc atgccgaaaa atcaattccg tgtcattact ttagggggat tttttccata
     1201 tcgcacgatt gccgttgcac aaaaacaaca aacacaacgg caaagcccca taccgtaccg
     1261 gcaagaaaat atgataaatt ataaacaatg ttcagccacc cgacacagac ccacaccgac
     1321 ccgccatgaa attacaacaa ttgaaatacg ccttagaagt ttaccagcac aacctgaacg
     1381 tttccgaagc ggccgaagcc ttgtttactt cgcaacccgg catctccaaa caaatcaaat
     1441 tgctggaaga agaaatcggc attcagattt ttatccgcag cggcaagcgc gtggtttcgg
     1501 tctcgcagcc gggcaaggtg gttttggata ttgcagaacg tattttgcgc gatgttcaga
     1561 acattaaaaa tatcggcagc gagtttaccg gacaggacag cggttcgctg acggttgcca
     1621 cgacgcatac tcaggcacgc tatgccctac ccttgattgt tgccgatttt gtgaaacgct
     1681 atccgaaagt caacctgacc atcaaacagg ggagccctgc cgccatcgca cgtatggtta
     1741 cctcaggcga ggcggacttg gcgattgtta cggaacggat agacgaccat cccgaactgg
     1801 gaaaacttcc ctgctatgac tggactcatg cggttatcgt accgaacgac caccccttgc
     1861 tcgaatgcag aaaccccctc cgcattgaag atttggcgag gtttccgctg attacttatg
     1921 aatttgcatt caatgcgggc agcagcatcg cgcgggcatt ttccaaagcc cgtttggaac
     1981 agccggatgt cgcattggcg gcggcggata cggacgtatt gaagacttat gtgcgcttgg
     2041 gtttgggcgt gggactgatg gcgaaaatgg cgtacaaccc ggatacggac ggcgatttgc
     2101 agcttgtgga tgcggcacac ctgttcgagc cgtcgccgac gtggattgct ttgcgcagcg
     2161 atacttattt gcgcggatat gcctacgact ttatccaagc gtttgcgccg cacctgacac
     2221 gcgagaaggt ggataggatt ctgtacacgc ccatcagcga ggatttttcg atttaggcgg
     2281 ctgccggttt tcagacggca ctttgcggca gatacaacaa acaggacaga tgttttcgtc
     2341 tgccctgtgt ttattgagaa tgccgtctga aatgttcgta cgggttaatc aaatggcgtg
     2401 cgaacaaccg gataccatct tcttcaacac ctgcagattg aggatcttga tgtgtttgtg
     2461 ttcgacggaa atcaatcctt cctgatggaa cttggataat gtgcggctga cggtttcaag
     2521 tttcagccca agataactgc cgatttcttc gcgagacatt cttaagatga agtcgttggc
     2581 agcaaaacct cgggaataaa ggcgttggga aaggttcagc aggaaggcgg caatccgctc
     2641 ttcggcgcgc atattgccca acagcagcat aacaccttgg tcgcgcacga tttcacggct
     2701 catcatgcgg aagaagtgcg tacgcaggct ggggatgttt tgccccagtt cttcgatgtg
     2761 ggtaaacggc agttcgcaca cttcgctgtc ttccaaggcg accgcgtcgc aactgtgcac
     2821 atgggaacag atgccgtcca tgccgatgag ttcgcccgac ataaagaaac ccgttacctg
     2881 atcgcggccg tcctgactgg cgacggttgt tttgaagaag cccgaacgga tggcaaagag
     2941 cgaggtaaag gcttcgccga cacagaacag gtattcgccc tttttcaggc ggcggctttg
     3001 acggatgacg gcatcgagtt ggctgagctc gttgggcagc agcccgacag gcaggcagag
     3061 ttcccgcaaa gaacaggaag aacacagcgt tttcatctga tgtgtagtat tatgcgaagc
     3121 cataccgtac ctttttgtgc gctttgcccc atcatgatta tagtggatta aatttaaacc
     3181 agtacggcgt tgcctcgcct tgtccttatt taaatttaat ccactatatg tgcttattga
     3241 cacatatcaa gacaggttta tcatactgtg gcattctacc aaactatcca aaatttgact
     3301 aacatcataa aatcgcacac acacaccatg aaaatcattc agatacagaa caagcacaat
     3361 gtaaacgatg accgccccga gtttgaccgc gcgctgattg ccagcctgcc cgccagcggt
     3421 ccgcgctaca cttcctaccc taccgccgac cgtttccatg acggtttccg cgaaggcgaa
     3481 tatatcaaag ctttacattt gcgcggtatg ggcgcgttaa acaaaccgct ttccctttac
     3541 attcacattc cgttctgcaa caccatctgc tactactgcg gctgcaacaa aatcatcacc
     3601 aaagacaaaa gccgcgccga tgcctacatc gaatatcttg aaaaagaaat ggaactgctc
     3661 gctccacatc tgaacggacg gcaccagctt gcccaactgc acttcggcgg cggcacgccg
     3721 acctttttga gcgacgaaca gatcgaacgt gtcttccgca tgatacgcaa acatttcgag
     3781 ttaatcccca ccggcgaata ctccatcgaa atcgacccgc gcaaagtcag ccgcgacacc
     3841 gtcctcatgc tcggcagact cggcttcaac cgcatgagca tcggcattca ggatttcgac
     3901 cccaaagtgc aggcagcggt caaccgcatc caaagttacg aagaaaccaa agaagtcatc
     3961 gatgcggcgc gcgaagcggg gttcaaatcc gtcagcgtcg atttgattta cggcctgccg
     4021 caccagactt cggaaagcat caaaaccacc atcgataccg ttttgtcgct cgatcccgac
     4081 cgcctcgccc tttatcacta cgcccacctg ccgcacgtgt tcaaaccgca acgccgcatc
     4141 gataccgtcg ccgttcccga cagcgaagag aagctcgata tgctgcaata ctgcgtccaa
     4201 accctaaccg aacgcggcta cgtcttcatc ggcatggacc atttcgccaa acctgacgac
     4261 gaactctcca tcgccctcaa agaaggcttc ctccagcgca acttccaagg ctattcgacc
     4321 tacgcggatt gcgatttggt cgccatcggc gtgtcgtcca tcggcaaaat cggcagcacc
     4381 tattcccaaa acgaacgcga catcgatgcc tactatgccg ccatcgacga aggcagactg
     4441 cccatcatgc gcggttatca gctcaatcag gacgacatcc tgcgccgcaa catcattcag
     4501 gatttgatgt gccgtttcgc gctcgactat cggatttacg aaagtatgtt cggcatcccg
     4561 ttcgaccgct acttcaaaga cgaactggcg gatttggaaa aactcgccgg cttgggattg
     4621 gtgcgcctga acagccacgg gctgaccgtt accccgaaag gacgcttcct catccgcaac
     4681 atcgccatgg tcttcgatta ccacctgcgc cacaaagaaa ccaaggcgaa atattcgcaa
     4741 acggtgtgat tgcgtctaac gtacaaatgc cgtctgaaag gctttttcag acggcatttt
     4801 gctgccggca ggataagtgt tttcaagaac aggcggcggc atatcataac gttccgcacc
     4861 tttgtgtccg accgttccga aaccaagata tagtggatta acaaaaacca gtacagcgtt
     4921 gcctcgcctt gccgtactag ctgtactgtc tgcggcttcg tcgccttgtc ctgatttttg
     4981 ttaatcacta taccaaacgg catatcccga cagaacagat tgtgcataag gcacaagccc
     5041 gcacattcca tcaacaaaat gccgtctgaa cacgggttca gacggcatca gtattttaca
     5101 atcagaatac tgcctgtaaa accaagtagc agacaaccga caatacggcg gcggcaggca
     5161 gggtaatgac ccacgccaaa ccgatgggct tcatcagttt ccagttggca ttgcggttga
     5221 ccagaccgat accgagtacc gcgccgacca agatatgcgt actggacacg ggcagcccca
     5281 tcagcgacgc gcccatcacg acggatgcgg cggacagttc ggcggtaaaa cccgaagcag
     5341 gatgcatttc cgccaaactc gtaccgacgg ttttaatcac ctctttaccg acaaaccaca
     5401 aaccgacaat cagcgcgata ccgaaagtca gcatcgcaat cggggggacg acattttgcg
     5461 cggcaacgct gttggtacgc aaaacatcca taatcgcggc aaacggaccg atggcgttgg
     5521 cgatatcgtt cgccccgtgg ctgaatgcga agccgcaggc ggtaaagacc tgcatccatg
     5581 aaaacatctg aaaggtcgat ttgcccaagt ctttacgctt gaggcttttg gcaaaaacaa
     5641 acgtccccat ccacaccgcc gcgcctatca taaagatggt caggaagctg ttgacgttgc
     5701 tcatccccaa atgcaggttt ttcaagccct tgaaaatcag catagcggaa atcatcatcg
     5761 cgccgaacga agcgataaag ggaatccaag aatgcagtgc cttgtaggaa tcgacattgt
     5821 ttttacggtt gtcgaacgca taaagaccgc ggtaatactc cgattgcagc tcttgcggat
     5881 cgaattcggg ttcgtcgtaa atttgcgcgt cgtgcgccat tttggtggcg tactcgactt
     5941 tttcggcttc ggacaaaccc tcgaaaaaca ggcggtgccg ttctttatag gccttttttt
     6001 cctgcttgat gcccttgagc gtgccttccg cccaagcgtt gtaatctaag acgtttttct
     6061 tgacgcgcga aaacaggaaa taggacaccg cgccgcccaa cacgggcgac aatacccaag
     6121 aaacaccaat accgcccagc ttgccccaac gtatcaaatc gcccgatgca gcatcgttca
     6181 ttaccgccat acataccgcg ctgccgacaa tgccgccgat aatggaatgg gtggtagata
     6241 ccggaagccc ttttttcgag gcaaacaaca gccacaacgc cgccgccaaa agcgcggaca
     6301 tcataataaa cacaaactgt atgggttcga aatcaacacc cttcaaatcg acgatgcctt
     6361 tgcgtatggt attggttacc tcaccgcccg cgatgaccgc gccgctgacc tcaaataccg
     6421 ccgcaatcag caaagcctgc gggatagtca gcgtacccgc accgacgctg gtgccgaaag
     6481 aattggcaac atcgttgccg ccgatgttga acgccataaa cacgccgaac atcgtggcaa
     6541 taatgaataa ggcggcgtaa ttgtaatggg tataacccaa gccccaataa ataaaatagc
     6601 cgactgtacc taccagcatg gcggcaaaga cggcgttgat ggttttaaca tttgcgctca
     6661 tttggatttg agccatggca atcttccttt aatgtggtgg aaatcatgag tgttgccgac
     6721 actgtactgc tgcctccggt cgaactgccg tttcgggata tggcagacgc atccttcctt
     6781 ctgaaccgca tccgaatacc cccaaacctg accgaatgca aaactgctgc cggaaacggt
     6841 ttgtatgaca cttctactac tggatgttgc gggcgcatta taatattttt ccatccgtct
     6901 tgaaacattt atttacactt tatttacact gcggcggcaa atcggtatac gagcgtcaat
     6961 acacgttaaa atggcgtttt gcaccagttt gggagtgatg atggaaacac agctttacat
     7021 cggcatcatg tcgggaacca gtatggacgg ggcggatgcc gtgctggtac ggatggacgg
     7081 cggcaaatgg ctgggcgcgg aaggacacgc ctttaccccc taccccggca ggttacgccg
     7141 caaattgctg gatttgcagg acacaggcgc ggacgaactg caccgcagca ggatgttgtc
     7201 gcaagaactc agccgcctat atgcgcaaac cgtgggcgaa ctattaaaca agcaaaacct
     7261 cgcgccgtcc gacattaccg ccctcggctg ccacgggcaa accgtccgac atgcaccgga
     7321 acacggttac agcatacagc ttgccgattt gccgctgctg gcagaacgga cgcggatttt
     7381 taccgtcggc gacttccgca gccgcgacct tgccgccggc ggacaaggtg cgccgctcgt
     7441 ccccgccttt cacgaagccc tgttccgcga cgacagggaa acacgcgcgg tactgaacat
     7501 cggcgggatt gccaacatca gcgtactccc ccccgacgca cccgccttcg gcttcgacac
     7561 agggccgggc aatatgctga tggacgcgtg gacgcaggca cactggcagc ttccttacga
     7621 caaaaacggt gcaaaggcgg cacaaggcaa catattgccg caactgctcg acaggctgct
     7681 cgcccacccg tatttcgcac aaccccaccc caaaagcacg gggcgcgaac tgtttgccct
     7741 aaattggctc gaaacctacc ttgacggcgg cgaaaaccga tacgacgtat tgcggacgct
     7801 ttcccgtttt accgcgcaaa ccgttttcga cgccgtctca cacgcagcgg cagatacccg
     7861 tcaaatgtat atttgcggcg gcggcatccg caatcctgtt ttaatggcgg atttggcaga
     7921 atgtttcggc acacgcgttt ccctgcacag caccgccgaa ctgaacctcg atcctcaatg
     7981 ggtggaggca gccgcatttg cgtggttggc ggcgtgttgg attaaccgca ttcccggcag
     8041 cccgcacaaa gcaaccggcg catccaaacc gtgtattctg ggcgcgggat attattattg
     8101 agcgcaaata ccgtctgaaa gccatttccg ccgctcagac ggcattttcg ccccttttgt
     8161 ttacaaaccc ttaaaatcca tttacactta aacccgttca aaacaaaaca aaccctgcca
     8221 tgaaaaccct gctcctcctc atccccctcg tcctcac
//
LOCUS       DAWKJW010000079         8236 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.079, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000079 DAWKJW010000000
VERSION     DAWKJW010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8236)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8236)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8236
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.079"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            410..2296
                     /locus_tag="WJJ54_001217"
     CDS             410..2296
                     /locus_tag="WJJ54_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase component I
                     family protein/aminotransferase class IV"
                     /protein_id="HEZ7342088.1"
                     /translation="MPYFALFDDAVSGRAKRYQNHVESRFFRPEELDALDGALQSGWQ
                     KGLHAVLFADYGFGLPLTGVESERGGNLALHWFADCADIDAASWLARHSDGLPAGIST
                     PQSSVSETDYLDRIRQIHEAIRRGDTYQINYTTRLHLQAYGNPINLYRRLRQPVPYAV
                     LSHLPDAEGQSAWTLCFSPELFLKIGSDGIISTEPMKGTAPILGDGQDERRAAELQAD
                     PKNRAENVMIVDLLRNDLGKIAQTGKVCVPEPFKVSRFGSVWQMTSTIQAQALPHITV
                     ADILRAAFPCGSITGAPKKMSMQIIETLETEARGLYTGSIGYLNPCSGGLGFEGIFNV
                     VIRTLSLKPASNPASDGIVSGIGSPDSNVQARTAGQGGATPYRFQVHPLYQGVYGVGS
                     GIVIDSDPAAEYRECGWKARFLNELRPDFGIFETMRAENGRCTLLDRHLCRLKTSAQA
                     LNLPLPDGCENQIKQYIADLPDGAFRIKALLASDGISLSRAVLNHLADKQRVIISPTI
                     LPVQNYLRRFKTTHRPLFDQAWQTAETQGAFDSLFFNSDGILLEGGRSNVFVKYQGQW
                     LTPSLDLDILNGIMRQAVLDEPQKYLQTNQVIETHITQKTLQEAEEIRLSNALRGVFA
                     AALA"
     gene            complement(2357..3880)
                     /locus_tag="WJJ54_001218"
     CDS             complement(2357..3880)
                     /locus_tag="WJJ54_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ7342089.1"
                     /translation="MVSASLCCLLPSAVLAQLPEGGVRQDAPSQDAAVQVQQKQWLDI
                     LSEEERSSEKNENVGEPTVVGDDFLAANPRILESALIQALNGNSADLVFSLAALYRKQ
                     PNHNPKLIARADALLAKLKGRTSEAVEHYRTLYESDVSDDRILLDLAAAEFQDYRLSE
                     AAAHFHHAAQRDIPAPVLENVKRFQEAVKRQTEWKWSGGISPVHSDNANNAAPRYCIE
                     TRGQTACSVTLPVSANGLNYELNTEKLTPLYGHHAVKFRANLSGTSYFFDRKSAYDDA
                     FGRAYLGWQRKDGKQTVSVLPFYQAQLAGSSEFDSKKENNRRAAPYMLAHGVGIQASY
                     TVKFGRDMQFYSSLERYRRYYRENARAERNDGWQDSLYVSLARRFGNSATVFGGWQFV
                     RFVPKRETVGGAVNNAAYRRNGVYAGWAQEWRQLGGLNSRVSASYARRNYKGVAAFST
                     EAQRNREWNVSLALSHDKLSYKGIVPALNYRFGRTESNVPYAKRRNSEVFVSADWRF"
     gene            4463..5458
                     /locus_tag="WJJ54_001219"
     CDS             4463..5458
                     /locus_tag="WJJ54_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ7342090.1"
                     /translation="MKIKVPAISAAATLILTACAGGGASEPKVPVVIPTAQPIANIKL
                     SDESSAVQTINTLSGKGGSLHEAELEVKTSWGGSYTDNQYVYQTPSGNYYNISSYSDP
                     IVPSYSSPSYALRTRHEGQPLSEGGKLFVCCSSSGQFTYAPATKHDHLKFGAWINADG
                     TADLFVGGKPVGTAKPSYYTPSDSTVAKGKTTYEVWAVRVRNGNIVTSTYDPGKSSGS
                     SEKTAPKLSLLTANFNTNKLGGTILGNADYGPDVVMKDVGINGVDFSGTAESDGKNGK
                     VEGKFFGQFNGDKTEVSIGGKVTFDADKSLDTVFGGVKNDDDRNTTDTSLTPVSK"
     gene            5515..7932
                     /locus_tag="WJJ54_001220"
     CDS             5515..7932
                     /locus_tag="WJJ54_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
                     /protein_id="HEZ7342091.1"
                     /translation="MSFPFKPVLLAAIVSQTFPAFAADPEPQAHQSLNEVKVIGGRKA
                     QKLGEEKVRRQALDKQMVSDESDLVRYDPGISVVEGGRSGSNGFTIRGVDKDRVAINV
                     DGLAQAESRSSEAFQELFGAYGNFNANRNTSEPENFSEVTLTKGADSLKSGSGALGGA
                     INYKTKSASDYVSEEKPYHLGIKGGYIGRNSQKFSSITAAGTWLGLDALMVYTRRFGK
                     ETKNNSNTADTPITDNKQSWNPNAGSTNYGSRGIARSKPDPQNWVNKSTLFKLGYNFN
                     DQNRIGWIYEDSRTDRTTTELSNMWAANWKGEPLGDTRSRQDISYRKRIGFEYKNQLE
                     KGPWDSLNLRYDRQTIDMSTWTWDLPTDYASNGVNSDVYHMFRNIRQKTAQYSVDAEK
                     QIDFSKSVWAMQYGLGGSKNDNGNSDHSYWVRLYDPKYQTSNSQKLTMLVESSSKNRF
                     AYWNNTFQFGNSNQYRLNAGVRYDNSGSKAKDNPNYTPAIRGQIPYLGSERKHSGFSY
                     GLGLDWKFTPRLNLLAKYSTGFRAPTSDETWLLFPHPDFYLKANPNLKAEKAKNWELG
                     LAGSGKAGSFKLSGFKTKYRDFIELTYMGVSSDNPNSPNYAPISDGTALVSSPVWQNQ
                     NRSSAWVKGLEFNGTWNLDSIGLPKGLHTGLNVSYTKGKAKQTNGQETPINALSPWSA
                     VYNLGYDAPSKRWGINAYATRTAAKKPSDTVHSNDDLNNPWPYAKHSKAYTLFDLSAY
                     LNIGKQVTLRAAAYNITNKQYYTWESLRSIREFGTVNRVDNKTHAGIQRFTSPGRSYN
                     FTIEAKF"
BASE COUNT         2210 a         2396 c         1840 g         1790 t
ORIGIN      
        1 cagatgcccg acggtcttta tagcggatta acaaaaatca ggacaaggcg acgaagacgc
       61 agacagtaca gatagtacgg aaccgattca cttggtgctt cagcacctta gagaatcgtt
      121 ctctttgagc caaggcgagg caacgctgta ctggtttttg ttaatccact atacttggag
      181 ctgatcttgc ttttcgccta attctacgtt ttcaaacggt tgcagctggt ggtctgtcat
      241 aaaggtctcc ttattgtatt tcaggttgga aatcggaatt tgttttcaca attttacacc
      301 ttcgcccccc actttctcta cataaaatta cattttgccg atatttgccg aatcgtctga
      361 aaatatgtgt aaaaagagcg tataatcaaa acatttgccc cgaattgcca tgccttattt
      421 cgccctgttt gacgatgccg taagcggccg cgcaaaacgc tatcaaaatc atgtggaaag
      481 ccgttttttc cgtcccgaag aactcgatgc tttggacggc gcgctgcaat cgggctggca
      541 aaaagggctg catgccgtgt tgtttgcaga ctacggattc ggtttgccgc tgacgggggt
      601 tgagtccgag cgcggcggca atcttgccct gcattggttt gccgactgcg ccgacatcga
      661 tgccgcaagc tggcttgccc gacattcaga cggcctcccc gccggcattt ccacgccgca
      721 atcctccgta tccgaaaccg attatctcga ccgcatccgc caaatccacg aagccatccg
      781 gcgcggcgac acctatcaaa tcaactacac cacccgcctg cacctgcaag cctacggcaa
      841 tcccatcaac ctctaccgcc gcctgcgcca gcccgtcccc tatgccgttt tgtcccacct
      901 gcccgatgcg gaagggcaat ccgcgtggac gctgtgtttc tcgcccgaac tcttcctcaa
      961 aatcggttcg gacggcatca tcagcaccga accgatgaaa ggcaccgcgc cgattttggg
     1021 cgacggacaa gacgaacgcc gcgccgccga gttgcaagcc gacccgaaaa accgcgccga
     1081 aaacgtgatg attgtcgatt tgctgcgcaa cgacctcggc aaaatcgccc aaaccggcaa
     1141 agtatgcgta cccgagccgt ttaaagtgtc gcgtttcggc agcgtttggc agatgaccag
     1201 caccatccaa gcccaagcct tgccgcacat caccgtcgcc gacatcctcc gcgccgcctt
     1261 cccctgcggc agcatcaccg gcgcgcccaa aaaaatgagt atgcagatta tcgaaacgct
     1321 cgaaaccgaa gcgcgcggac tttatacggg cagcatcggc tatttgaacc cgtgttccgg
     1381 cggcttgggg tttgaaggca tattcaacgt cgttatccgc accttgtcgc tcaaacccgc
     1441 ttcaaacccg gcttcagacg gcattgtttc aggcatcggc agcccagatt caaacgtgca
     1501 agcccgaacg gcagggcaag gcggggcaac gccgtaccgg tttcaagttc atccactcta
     1561 tcaaggggtg tacggtgtcg gttccggcat cgtcatcgac agcgaccccg ccgccgaata
     1621 tcgggaatgc ggctggaaag cccgtttcct caacgaattg cgccccgatt tcggcatctt
     1681 cgaaaccatg cgcgcggaaa acggacgctg caccctgctc gaccgccacc tatgccgtct
     1741 gaaaacctcc gcccaagcac tcaacctgcc cctgcccgac ggttgcgaaa atcaaatcaa
     1801 acaatacatt gccgacttgc ccgacggcgc gttccgcatc aaagccctgc tcgcttcaga
     1861 cggcatcagc ctgtcccgcg ccgttttaaa ccatttggct gacaaacaac gcgtcatcat
     1921 ttcgcctacc atcctgcccg tacaaaacta cctgcgccgc ttcaaaacca cccaccgccc
     1981 cctcttcgac caagcgtggc aaaccgccga aacacaaggc gcgttcgaca gcctgttttt
     2041 caattcagac ggcatcctgc tcgaaggcgg cagaagcaac gtgttcgtca aataccaagg
     2101 acaatggctt acgccctctt tagatttaga cattttaaac ggcataatgc gccaagccgt
     2161 gttggacgaa ccgcaaaaat atttgcaaac aaatcaagtg atcgaaacac acatcacaca
     2221 aaaaacactg caagaagccg aagaaatccg cctctccaac gccttgcgcg gcgtatttgc
     2281 cgccgccctt gcctgaatat gcaaaaatgc cgtccgaacc tgtttccaca aggttcagac
     2341 ggcattatcc caccattcaa aaccgccaat ccgccgacac aaacacctcg ctgttgcggc
     2401 gtttcgcata cggcacatta ctttccgtcc tgccgaaacg ataattcaac gccggtacga
     2461 tacctttgta cgacaacttg tcatggctca aagccagcga gacattccat tcgcggttgc
     2521 gttgcgcctc tgtcgagaaa gccgcaacgc ccttatagtt gcggcgggca taagacgcgg
     2581 aaacccgact gttcaaaccg cccaactgcc gccactcctg cgcccagccg gcataaacac
     2641 cgttgcgccg gtaggcggca ttattgaccg cgccgcccac cgtttcgcgt ttcggcacaa
     2701 accgcacgaa ctgccagccg ccgaacacgg ttgccgaatt tccgaaacgc cgcgccaacg
     2761 acacatacag actatcctgc caaccatcat tacgttccgc acgggcattc tccctgtagt
     2821 atcgccgata tcgttccaac gaactgtaaa actgcatatc ccgtccgaac ttgaccgtat
     2881 atgaagcctg aatgccgacc ccgtgtgcca gcatatacgg cgcggcgcgg cggttgtttt
     2941 cttttttgct gtcaaactcg ctgctgcctg ccaactgtgc ctgataaaac ggtaaaacgc
     3001 tgacggtttg tttgccgtct ttgcgctgcc agcccaaata agccctgccg aacgcatcgt
     3061 cgtaagccga tttccggtcg aaaaaatagc ttgtgccgct gaggttggcg cggaatttga
     3121 cggcgtgatg cccgtacaac ggggtgagtt tttcagtgtt caattcgtaa ttcaagccgt
     3181 tggcactgac aggtaaggta acactgcatg cggtttgccc ccttgtttcg atgcaataac
     3241 gcggagcagc gttgttggcg ttatcgctat gcacgggact gattccgccg gaccatttcc
     3301 attctgtctg ccgtttgact gcttcttgaa aacgtttgac gttttccaaa acgggggcgg
     3361 gtatatcgcg ttgcgcggca tgatggaaat gtgccgccgc ttcgctcaaa cgataatcct
     3421 gaaactctgc cgccgccaaa tccaacaata tgcggtcgtc tgaaacgtcg gattcataaa
     3481 gggtacgata atgctcgacc gcttcagaag tccgcccttt caactttgcc agcaaagcat
     3541 cggcacgtgc aatcagcttt ggattatggt taggctgttt gcggtaaagg gcggcaagcg
     3601 aaaaaaccaa atccgcgcta ttgccgttaa gtgcttgaat tagcgcgctc tcaagaatac
     3661 gcgggtttgc cgctaaaaaa tcatcgccga ccacagtcgg ttcgccgaca ttctcattct
     3721 tttcagacga cctttcttct tcggacaaaa tatccagcca ttgtttttgc tgcacttgta
     3781 cggcagcatc ctgagaaggc gcatcctgcc ggacaccacc ttcgggcaat tgagccaaga
     3841 ctgcggaagg caacaggcaa cataacgatg ccgaaaccat tttttgtttt attcttaaca
     3901 ttcaaaatca tccgaaatat atgtgtgtat atcgtagggg tagccaaatg caaaccgcca
     3961 tgccctactg attctcccag tcaagaattt acggctatca aaggtcgtct gaaacttttc
     4021 agacgacctt atttttgcgt aaaagcaaca gattcgcatt aagatgcagc attatagagg
     4081 taaatttcca aaacaaacat aactgattta tttttatggt cttataaatt attcaaatgt
     4141 tattcatcag tagattcatg ggattaatca agccaaccca ctaaacacgc ctgcaatata
     4201 tcttgcgaat ccaaagcaat agtttgatta cactatcacc cgatattctt catcagtaat
     4261 agatagcagt atcaaatcag atatttagaa caaatattca actccatgtc attaattgat
     4321 ttatttctta atatttactt aagaaatcat aaaaaatcca cgcggatatt gccaaaacac
     4381 cataattatt acaaaatatt acaacaaaat tggtaatcct tatcattaat ttataaaata
     4441 tcaatattaa gagagattca tcatgaaaat caaagtaccc gcaatttctg cggcagcgac
     4501 ccttattctg actgcctgcg ctggaggagg agcatccgaa cctaaagtcc ccgttgtcat
     4561 accaacggct cagcctatcg ccaatatcaa gctgagtgat gaaagcagtg cggtacagac
     4621 catcaacacc ctttccggta aaggcggcag tctgcatgaa gcggaactcg aagtgaaaac
     4681 atcatggggc ggcagctata ccgataatca atatgtctat caaacccctt ctggtaacta
     4741 ttacaacatc agctcatatt ccgacccgat tgtcccctct tactccagcc cgtcttatgc
     4801 cctgcgtacc cgccacgaag gccagccttt gtctgagggt ggaaaactgt ttgtctgttg
     4861 cagtagttcg ggacaattca cctatgcacc ggcaaccaaa catgaccacc tcaaattcgg
     4921 cgcatggata aatgcagacg gcacggcaga cctgtttgtc ggcggcaaac ccgtcggaac
     4981 ggcgaaaccg tcttattaca ctccgtcaga cagtacagtg gcaaaaggca agactacata
     5041 cgaagtttgg gctgtccgcg tccgcaacgg caatatcgtt acctcaacct acgatccggg
     5101 caaatcctcc gggtcgtctg aaaaaaccgc tcccaaactt tcactgctga cagccaattt
     5161 caacaccaac aaactcggcg gcacgatttt aggtaatgct gattacggtc cggacgttgt
     5221 gatgaaagat gtaggcatca acggcgttga tttctcaggc actgctgaat ccgatggtaa
     5281 aaacggcaaa gtcgaaggga aattctttgg tcaatttaac ggcgataaaa cagaagtcag
     5341 tataggcggt aaagttacct ttgatgccga taaatcgttg gataccgtgt tcggcggcgt
     5401 gaaaaatgat gacgatcgca atacgacgga tacaagcttg acacctgtca gcaagtaacc
     5461 gtacgtcaaa catcccaata aaccgataat cagtacatct ttaagaggca aaaaatgtcc
     5521 ttccccttta aacccgtact gctggcagct attgtcagcc aaactttccc tgccttcgct
     5581 gccgaccccg aaccacaagc acatcaaagc ttgaatgaag tcaaagtcat tggcggtcgt
     5641 aaagcccaaa aacttggcga agagaaagtc cgccgtcagg ctttggataa acaaatggtc
     5701 tccgatgaaa gcgacttggt gcgctacgat ccgggcatca gcgtcgttga aggcggacgc
     5761 tcaggttcta acggttttac catacgcggt gtcgataaag accgtgtcgc catcaacgtg
     5821 gacggactgg cacaagcaga aagcaggtcg tctgaagcat tccaagaact gttcggcgca
     5881 tacggcaact tcaatgccaa ccgcaacact tccgaacccg aaaacttctc ggaagttacc
     5941 ctcaccaaag gcgcggactc gctcaaatcc ggcagcggcg cattgggcgg tgccatcaac
     6001 tacaaaacca aatccgcaag cgactatgtt tccgaagaaa aaccctacca cttgggcatt
     6061 aaaggcggct atatcggacg caacagccag aaattcagca gcataaccgc cgcaggaact
     6121 tggctgggtc tggacgcatt gatggtttat acccgccgtt tcggtaaaga aaccaaaaac
     6181 aacagcaata ctgccgatac ccccatcacc gacaacaaac aaagctggaa cccgaatgcc
     6241 ggcagtacca actacggcag ccgtggcata gcgcgcagca aacctgaccc tcaaaattgg
     6301 gtgaataaaa gtaccttgtt caagctaggc tataacttca atgatcaaaa ccgtataggc
     6361 tggatttacg aagactctcg caccgaccgc acgacgaccg aattatccaa tatgtgggca
     6421 gcaaactgga aaggcgagcc attgggcgat acccgttccc gtcaagatat ttcctaccgc
     6481 aaacgcatcg gttttgaata taaaaaccaa cttgaaaaag gaccatggga cagcctcaac
     6541 ctgcgttacg accgtcaaac catcgacatg agcacctgga cttgggactt gccgaccgat
     6601 tacgccagca acggggttaa cagcgacgtg taccatatgt tccgcaacat ccgtcaaaag
     6661 accgcacaat atagtgtaga cgccgaaaaa caaatcgact tctccaaatc ggtatgggct
     6721 atgcaatacg gattgggcgg ttctaaaaac gacaacggta atagcgacca tagctattgg
     6781 gtacgcctat acgacccgaa atatcaaacg tccaacagcc aaaaattgac catgctggtc
     6841 gaaagctcgt ccaaaaaccg ttttgcctac tggaacaata ccttccaatt cggcaatagc
     6901 aaccaatacc gtctcaatgc cggggttcgc tacgacaaca gcggcagcaa agccaaggac
     6961 aaccccaact atacccctgc catccgcggt caaattcctt atctcggcag cgaacgtaaa
     7021 cacagcggtt tcagctacgg tctaggatta gactggaaat tcacgccgcg tctgaatctt
     7081 ctggcgaaat acagtacagg cttccgcgca ccgacttcgg acgaaacctg gctgctgttc
     7141 ccacaccccg atttctacct gaaagccaac ccaaacctga aagccgaaaa agccaaaaac
     7201 tgggaattgg gtctggcggg cagcggcaag gcgggcagct tcaagctctc gggcttcaaa
     7261 accaaatacc gcgactttat cgaactgacc tacatgggcg tgtcctcaga caaccccaac
     7321 agccctaatt atgcgccgat ttccgacggc accgcattgg tcagctcacc cgtttggcaa
     7381 aaccaaaacc gctcctccgc atgggtgaaa ggtttggaat ttaacggcac atggaacctt
     7441 gacagcatcg ggctgcccaa agggctgcac accggcctca acgtcagcta caccaagggc
     7501 aaggccaaac aaaccaacgg acaggaaacc cctattaacg ccctttcgcc atggagtgcg
     7561 gtttacaatc tgggctacga cgctccttcc aaacgttggg gcatcaacgc ctacgccacg
     7621 cgcaccgccg ccaaaaagcc gtccgacacc gtccacagca acgacgactt gaacaacccg
     7681 tggccttatg ccaaacacag caaggcctat acgctgttcg acctttccgc ctacctcaac
     7741 atcggcaaac aggttacgct ccgcgccgcc gcgtacaaca ttaccaacaa gcagtactac
     7801 acttgggaat ctttacgcag catccgcgag ttcggcacgg tcaaccgcgt tgacaacaaa
     7861 acccacgccg gcatccaacg ctttacctcg ccgggcagga gctacaattt caccatcgaa
     7921 gcgaagttct aagctcctga tgtgccaatg ccgtctgaaa cccgatgatt tgggtttcag
     7981 acggcatttt ttacggtcgc accgccgccc cctttcaggc ttgtaccaag cccaatcccg
     8041 caactctccg tcattcccgc aactctccgt cattcccgca actctccgtc attcccgcga
     8101 ctctccgtca ttcccacgga agtgggaatc tagaaacgca aagctgcaag aatttatcgg
     8161 aaatgactga aactcaacga acctggattc ccgcctgcgc gggaatgacg aagctatccg
     8221 cacagaaacc tgcacc
//
LOCUS       DAWKJW010000080         8154 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.080, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000080 DAWKJW010000000
VERSION     DAWKJW010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8154)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8154)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8154
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.080"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(82..309)
                     /locus_tag="WJJ54_001221"
     CDS             complement(82..309)
                     /locus_tag="WJJ54_001221"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342092.1"
                     /translation="MSEMSPEILEKSATESDFALFLTHFHDFKSRYSQVGGNPAMGSR
                     RDLSGKRQALRRHSRAGGNLEMKNHGVIGND"
     gene            complement(306..2348)
                     /gene="recG"
                     /locus_tag="WJJ54_001222"
     CDS             complement(306..2348)
                     /gene="recG"
                     /locus_tag="WJJ54_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEZ7342093.1"
                     /translation="MMSPETRKQLKITDVSAKKLEKLNLHTAWDLVLHLPLRYEDETH
                     IMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQ
                     TAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
                     QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKF
                     DELLAQQLSMRLARQKRIGGTAAALGGDGTLTQALRQALPFALTDAQEKVVSEICRDM
                     AQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEILAEQHFIKFKQWLE
                     PLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQH
                     RFGVAQRLALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRL
                     VNNVRRAEVEGFVLGTCRKGRQAYWVCPLIEESETLQLQTAAETLARLQTALPELNIG
                     LVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERMGLAQLH
                     QLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLG
                     ARQSGVPMLRFAKLEEDLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV"
     gene            complement(2434..2877)
                     /gene="secB"
                     /locus_tag="WJJ54_001223"
     CDS             complement(2434..2877)
                     /gene="secB"
                     /locus_tag="WJJ54_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HEZ7342094.1"
                     /translation="MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVST
                     GSQKLEDGYYNVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACP
                     NILFPYAREAVSSTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA"
     gene            complement(2898..3155)
                     /gene="grxC"
                     /locus_tag="WJJ54_001224"
     CDS             complement(2898..3155)
                     /gene="grxC"
                     /locus_tag="WJJ54_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HEZ7342095.1"
                     /translation="MQTVTMYTGPFCPYCAMAKRLLHAAGVGHIDEIRVDASPEAFAE
                     MQQLSGQRSVPQIFIGETHVGGFTDLYRLQQEGRLDGLLNP"
     gene            3369..4862
                     /gene="rng"
                     /locus_tag="WJJ54_001225"
     CDS             3369..4862
                     /gene="rng"
                     /locus_tag="WJJ54_001225"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HEZ7342096.1"
                     /translation="MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIER
                     NSEHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHM
                     LFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
                     RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLY
                     QDLPLSLRVLRDMVGCDTQKILVDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFE
                     THNVEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVGARNFDETIFRTNLE
                     ACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLG
                     LVELTRKRSRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRI
                     LAAPNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQYDIVLM"
     gene            complement(4897..6147)
                     /locus_tag="WJJ54_001226"
     CDS             complement(4897..6147)
                     /locus_tag="WJJ54_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HEZ7342097.1"
                     /translation="MFVPLAMLAGMFSYYETFHETEALQDDLLRQAALYVAPDSKPET
                     LPEGDGDTRIFVQMPQQEDPVVSLPAHLADGLHTLQADGDDDYYRVYIRTTEQGRIAV
                     MQENEYREDLAADAARQSVLPLLAALPLMILLTVWITHKAMRPVRKLSQSLEQRRIND
                     LSALSVDNIPSEIRGFVTAINLLLKRADEDIRHRQRFVADAAHELRTPMTALSLQAER
                     LNNMSLPPDAARQSAVLQQSIRRNKHLLEQLLALARSQSDETPLAKTTFGLQSRFRQV
                     LQELMPLALEKRQDIGVAVGGDVEIFADETEIYTLVKTFVDNAIRYTPSEGRIDLGFT
                     DEGKYLAVWVEDNGNGIPESERVRVLDPFYRILGTEQQGTGLGLSIADTLAKKYGGYL
                     ELTDSRRFGHGLLIRALLDKETLK"
     gene            complement(6143..6318)
                     /locus_tag="WJJ54_001227"
                     /pseudo
     CDS             complement(6143..6318)
                     /locus_tag="WJJ54_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692565.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            complement(6536..7849)
                     /locus_tag="WJJ54_001228"
     CDS             complement(6536..7849)
                     /locus_tag="WJJ54_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HEZ7342098.1"
                     /translation="MLTFIGLLIIGVIVWLLLTEKVSPIIALILVPLFGALLAGFDVS
                     QLKEFYSGGTKSVMQIVIMFMFSILFFGIMNDVGLFRPMIGGLIKLTRGNIVAVSVGT
                     VLVSVVAQLDGAGATTFLLVVPALLPLYKRLHMNPYLLFLLLTSSAGLINLLPWGGPT
                     GRVASVLGADVGELYKPLLTVQIIGVVFILALSLLLGVREKRRIVRELGALPAVADLI
                     KPVPLSEEEQKLARPKLFWWNVLLFLAAMSLLFSGIFPPGYVFMLAATAALLLNYRSP
                     QEQMERIYAHAGGAVMMASIILAAGTFLGILKGAGMLDAISKDIVHILPDALLPYLHI
                     AIGVLGIPLELVLSTDAYYFGLFPIVEQITSQAGVAPEAAGYAMLIGSIVGTFVTPLS
                     PALWMGLGLAKLSMGKHIRYSFFWAWGLSLAILASSIAAGIVPLP"
BASE COUNT         1919 a         2405 c         2100 g         1730 t
ORIGIN      
        1 aatttaatcc actatagttt atccggcttc agcgatttcc gacacatttc cacacgcttc
       61 aatttcgtca tttctccggt ttcagtcatt gccgataaca ccgtggtttt tcatttctag
      121 attcccgcct gcgcgggaat gacggcggag ggcttgccgt tttcccgata agtctctgcg
      181 gcttcccatt gccggatttc cgcccacttg ggaataacga gatttaaaat catgaaaatg
      241 tgtcaaaaat aatgcaaaat cagattccgt tgcacttttt tccaatattt ccggcgacat
      301 ttcgctcaca cgcccaaata accttccctg ccggaaagcc atcgtgccaa atgcgcttcg
      361 acgatttcgg ggttttgttc aatcagcatc ggggcggttt cgcgcgcttg ttccaagagg
      421 tgcaggtctt cttcgagctt ggcgaaacgc agcataggca cgccgctttg gcgcgcgccg
      481 agaaattcgc cggggccgcg gatgttgagg tcttggcggg cgatttcaaa gccgtcggtg
      541 tgttcgtaga tgactttcag ccgcgctttg gcgagttcgc ccaagggttc ggcaaacagg
      601 aggacgcaca cgctttccgc cgcgccgcgc cctacccgtc cgcgtaattg gtgaagctgc
      661 gccaagccca tgcgctcggc gtgttcgatg accatcaggg cggcattggg cacatctacg
      721 ccgacttcga tgacggtggt ggcgaccaag acgttcagcc cccccgaaga aaaccgcgcc
      781 atcacttcgg ccttttcggc agccttcatg cgcccgtgta ccagtccgat attgagttcg
      841 ggcaatgccg tctgaagccg ggcgagggtt tcggcggcgg tttgcagttg cagggtttcg
      901 ctttcttcaa tcaatgggca gacccaatac gcctgccgcc cttttcggca agtgccgagg
      961 acgaagcctt cgacttcggc gcggcggacg ttgttgacga ggcgcgtttt aatcggtgtg
     1021 cgcccgggcg gcaattcgtc gatgacggac acgtccaaat cggcgaaaaa actcatcgca
     1081 agcgtgcgcg ggatgggcgt ggcggacatc atcagctgat ggacttcgcg ccctttgttt
     1141 ttgagggcga ggcgttgggc aacgccgaaa cggtgctgtt cgtccacaat ggtcaagccc
     1201 aaattgtgaa acgccacgcc gtctgaaaac agggcgtgcg tgccgacggc gattttgacg
     1261 ctgccgtcag cgagtttggc tttggcttcg tctttggctt ttttacgcaa actgccaaaa
     1321 aggcggacaa cttcaatgcc caaaggttcg agccattgtt taaatttaat aaaatgctgt
     1381 tcggcaagga tttcagtggg cgccattaca gccacctgcg caccggattc gatagccgtc
     1441 aaagcagaca aagcagccac aatggttttg ccgctgccga catcgccctg cagcaggcgg
     1501 tgcatcgggt aggtttgcgc catatcgcgg cagatttcgg aaacaacttt ttcttgcgca
     1561 tcggtcaggg caaacggcag ggcttggcgc agggcttggg tcaatgtgcc gtcgccgccc
     1621 aatgccgccg ccgtgccgcc gatacgcttc tgtcgcgcca agcgcatcga aagctgttgc
     1681 gccaaaagtt catcgaattt gagccgttgc catgcaggca gcgtgccgtc tgaaagctga
     1741 tgaatcgtga aactcggcgg cggcgaatgc aaaagacgca ggctttcggc gaggtgtggc
     1801 agcttcagac ggcacagcag ggcatcgggc agcgtgtcgt gcagcggcgt aacgtccaac
     1861 gccgtctgaa taatacggcg caaagtgggc tggttcaaac cgtttacggt cgggtaaacc
     1921 ggcgtgaggc tttccgccaa accgccgccc tcggcatcgc ggattttggg atgaatcatc
     1981 tcgtcgccgt aaaagccgtg tttgatttcg cccacggcgc ggatgcgctt accgaccgcc
     2041 gtctgtttct gatggctggc gtaaaagtgg atgaagcgca gaaaaaggac gctgccggaa
     2101 ccgtcggcga tttggacaat caactgcttg cgcggtttga acgttacttc ctgatggata
     2161 acctcgccct cgacctggca cggcacgcca atcggcgcgt ccttaatcgg catgatgtgc
     2221 gtctcatcct cgtaacgcaa cggcaggtgc aacaccaaat cccatgcggt atggaggttg
     2281 agtttttcga gcttcttggc ggaaacatcg gtgattttga gctgttttcg ggtttcgggc
     2341 gacatcatag gcagattcct ttggacgcgc ctattttatc cgaaaacaaa aatgccgtct
     2401 gaaacggatt cagacggcat cggcaggcag gaatcaagcc ccggcggctt cggcttcctg
     2461 ctgttgttgg taaatcgcct caaaattaat cggcgcgagc aggacgggcg ggaagccggc
     2521 gcgcgttacc gtactggaaa cggcttcgcg cgcgtaaggg aagaggatgt tcggacacgc
     2581 cacgcccaac agcagctgca catcttcttc ggggatgttt tccaaacgga aaatgccgct
     2641 ttgggttact tcgttcaaaa acatcgtgcg ctcgttatcc agcttggcgg taacggttac
     2701 ggtaacgtcc acgttgtagt agccgtcttc cagcttttgg ctgccggtgg aaacgcgcat
     2761 atccacttca ggctcgccct gttccaaaaa gatttgcggc gcgtgcggca cttccaaaga
     2821 caagtctttg acatacagtc gctcgatgct gaatacgggt tgcagttctt cgctcatttt
     2881 gttttcctag ttgggggtta agggttcagc agtccgtcca gcctgccttc ctgctggagg
     2941 cggtagaggt cggtaaatcc gccgacgtgc gtttcgccga tgaaaatctg cggcacgctg
     3001 cgctgtcccg aaagctgctg catttcggca aaggcttcgg ggcttgcatc gacacggatt
     3061 tcgtcgatat gtccgacacc tgccgcgtgc agcagccttt tcgccatcgc gcagtaggga
     3121 caaaacggac ctgtgtacat ggtaacggtc tgcatattgg gtttccgaaa gttttgcaat
     3181 gataatcaat ataggggcat ttcccctgtt tggcaagtgc ggaacagatg cacgttcaaa
     3241 cggcatgtgc ggaatgtgtc aaagtttctt ttttaaagta tgataggcat tgtgaaaaat
     3301 atttttgcac ccgcgctgcg cggcggaacg ggtgcaaaaa tatttttatt acattttcag
     3361 gaaaaaccat gttgtcagga ctccccatcc ccaaagacat cgcgcgcccg cccgaaacga
     3421 tattggtcaa catcacgccg caggaaacgc gcgtagcggt gttggaggaa aacaatatct
     3481 gcgagctgca catcgagcgc aacagcgaac acagcctggt cggcaatatc tatctgggcg
     3541 tggtgcgccg cgtgctgccc gggatgcaga gcgcgtttat cgacatcggc ttggaacgcg
     3601 cggcgttttt acacatcgtc gatgtcctcg aacaacgccg caaccccgaa gaaacccagc
     3661 gcatcgaaca tatgctgttt gaagggcagt ctgttttggt gcaggtcatc aaagacccga
     3721 tcaacaccaa aggcgcgcgg ctttccaccc aaatctcgct ggcggggcgt ttcctcgtcc
     3781 atcttccgca agaagaccac atcggcgtgt cccaacgcat cgaagacgat gccgaacgca
     3841 gcagcctgcg cgaacgcctc gacaagctcc tgccggaaaa tgcctgccgg ggctacatca
     3901 tccgcaccaa cgccgaaaac gccaccgacg aacagctcca gtccgacatc gactacctga
     3961 ccaaagtgtg ggaacacatc caagaacagg cgaaaatccg gccgccggaa accctgcttt
     4021 atcaggattt gcccttgagt ttgcgcgtat tgcgcgatat ggtcggctgc gacacgcaaa
     4081 aaatcctcgt cgattccacc gtaaaccacg ggcgcatgac gcgttttgcc gaacaatacg
     4141 tccacggcgc attgggcagg atagaattgt tcaaaggcga acgcccgctg tttgaaaccc
     4201 acaacgtcga acaggaaatc agccgcgccc tgcaaccgcg cgtcaacctc aacttcggca
     4261 gctacctgat tatcgaatcc accgaagcca tgaccacgat agacgtgaac accggcggct
     4321 tcgtcggcgc acgcaacttc gacgaaacca tcttccgcac caacctcgaa gcctgccaca
     4381 ccatcgcccg cgaattgagg ctacgcaacc tcggcggcat catcatcatc gacttcatcg
     4441 atatggcgca ggaaagccac cgcgaagccg tgttgcagga gcttgccaaa gccctcgcct
     4501 tcgaccgtac ccgcgttacc ctgcacggtt ttaccagcct ggggctggtc gagctgacgc
     4561 gcaaacgctc gcgcgaaaac ttaaaccaag tcctctgcga accctgccct tcctgccaag
     4621 gcagaggccg tctgaaaacg ccgcaaaccg tgtgctacga aatccagcgc gaaatcgtcc
     4681 gcgaagcgcg ccgttacgat gccgaaagtt tccgcatcct cgccgccccc aacgtcatcg
     4741 atttgttttt ggacgaagaa tcgcaatcct tggcaatgct gatagatttc atcggcaaac
     4801 cgatttctct ggcggtcgaa accgcttaca cgcaggaaca atacgatatt gtgctgatgt
     4861 aaaaaatgcc gtctgaagcc ttcagacggc atctgtctat ttcagggttt ccttgtccaa
     4921 caaggcgcgt atcagcagac cgtgtccgaa cctgcggctg tcggtcagtt ccaaatatcc
     4981 gccgtatttt ttggctagcg tgtcggcaat cgacagcccc agccccgtcc cctgctgctc
     5041 cgttcccaaa atacggtaaa acggatcgag gacgcggacg cgttcggatt ccggaatgcc
     5101 gttcccgtta tcttccaccc acacggcaag atatttccct tcgtctgtga aacccaaatc
     5161 tatcctgcct tcggacgggg tataacgtat tgcgttatca acaaacgttt taaccaaggt
     5221 atagatttca gtttcatcgg caaatatttc gacatcacct ccgaccgcca caccaatgtc
     5281 ctgacgtttt tccaaggcaa gcggcatcag ttcctgcaac acttggcgga aacggctttg
     5341 cagaccgaat gtcgttttcg ccaaaggggt ttcgtccgac tgcgaacgcg ccagtgccaa
     5401 aagctgctcg agcaggtgtt tgttgcgccg tatgctttgc tgcaaaacgg cagactgccg
     5461 cgccgcatcg ggtggcagag acatattgtt gagccgttcc gcctgaaggg aaagggctgt
     5521 catcggcgta cgcaattcgt gtgccgcgtc ggcgacaaac cgctgacggt ggcggatgtc
     5581 ttcatccgca cgtttcaaaa gcaagttgat ggcggttacg aaccctctga tttcactggg
     5641 aatattgtcc acactcaagg cagacaggtc attgattcgg cgttgttcga gactttgcga
     5701 caatttgcgg acggggcgca tggctttgtg cgtaatccac acggtcagca gtatcatcag
     5761 cggcagtgcc gccagcaggg gcaacacgct ttgccgtgcc gcatccgccg ccaaatcttc
     5821 acggtattcg ttttcctgca tgacggcaat ccgtccctgt tcggtcgtgc ggatatagac
     5881 gcggtaataa tcgtcgtccc cgtccgcctg aagcgtgtgc agaccgtccg ccagatgcgc
     5941 aggcaggctg acaacagggt cttcctgctg cggcatctgc acgaaaatgc gcgtatcgcc
     6001 gtcgccctcg ggcaaagttt cgggtttgga atcgggtgcg acgtacaatg ccgcctgacg
     6061 gagcaggtcg tcctgcaacg cttccgtttc gtggaaggtt tcgtagtagg aaaacatacc
     6121 tgcaagcatt gccagcggaa caaacatcca aaccgtcccg ccccagcaaa cccaaatcca
     6181 gcagcatcaa gtcataaggc tgggcagcgg cagccgcgcg ccgtttttga cccaatccac
     6241 cgcatagccg ccgtctttca aacttgccga caccgcctcc gcaatcatcg catcgtcttc
     6301 caccagcaaa acacgcatca actttccctt caaaataaac cgtgcctatt ctaacacccc
     6361 aaaattagcc gcaatttagc ggcctttacg cttgccggta tttttcaaaa ctgcggcaca
     6421 aaaaaccgcg ccggcaactg ccttcagacg gcattggggc gcgattgcaa cacacgggca
     6481 ggcagagcct gcgacagacc acaggaacga ttcaggcttc agacggcttc gccgtttacg
     6541 gcagaggcac gattcctgcc gctatcgaac tggccaatat cgccagcgac aaaccccacg
     6601 cccaaaaaaa cgaataacgg atgtgtttgc ccatcgacaa tttcgccaaa cccaagccca
     6661 tccacaaagc cggcgaaagc ggcgtaacaa aagtgccgac gatactgccg atcaacatcg
     6721 cataacctgc tgcttcgggc gccacgcccg cctgcgaggt aatctgctcc acaatcggaa
     6781 acagtccgaa ataataagcg tccgtactca aaaccaactc aagcggaatg cccaacacac
     6841 cgatggcaat atgcagataa ggcagcagcg cgtccggcag gatatgcaca atgtctttgg
     6901 aaatcgcgtc caacatcccc gcacccttca aaatccccaa aaacgtacct gccgccaaaa
     6961 taatggacgc catcatcacc gcgccgccgg cgtgggcata aatccgctcc atctgttcct
     7021 gcgggctgcg gtaattcaaa agcaacgccg ccgttgcagc cagcataaat acataacccg
     7081 gcgggaagat gcccgaaaaa agcaggctca tcgccgccaa aaacagcagg acattccacc
     7141 aaaacagttt cggacgcgcc aatttttgtt cttcttccga caaaggcacc ggctttatca
     7201 aatccgccac ggcgggcaac gcgcccaact cccggacaat ccgccttttt tcacgcacac
     7261 ccaaaagcag ggatagcgca aggataaaca ccacaccgat aatttgcacc gtcaacaaag
     7321 gtttatacaa ttcgcccaca tctgcgccca acacgcttgc aacccgcccg gtcggcccgc
     7381 cccacggcag aaggttaatc aatcccgcac tggaagtcag cagcaaaaac agcaggtaag
     7441 gattcatatg cagacgcttg taaagcggca aaagggcggg gacgaccaat aaaaacgtcg
     7501 tcgcacccgc cccgtccaac tgcgccacca ccgacaccaa gaccgtcccc acactcactg
     7561 ccacgatatt accccgagtc agcttaatca aaccgcctat catcggacga aacagcccca
     7621 catcgttcat gattccaaaa aacaaaatgg aaaacataaa cataatcaca atctgcatca
     7681 ccgatttggt gccgcccgaa taaaattctt ttaattggga tacatcaaac cccgccagca
     7741 acgccccaaa cagcggcacc aagattaatg cgatgatggg cgacactttt tccgtcagca
     7801 gcaaccatac gatgaccccg ataatcagca gtccgataaa cgtcagcatc atttctcctt
     7861 tattttattt taaacagaaa accgaccgtg caggcaaaac cgcccacaga cgcgggataa
     7921 gccctgcatt ctactttttt attttgaaac aagtcaatcg gtcatttcct cccattcacg
     7981 cctgccgcca ttcctgcatc cgtccgtcat ttcacggcgg caaccgatac ggaacaaccg
     8041 gcaaatcggt atcgggacgg cgcgggggca ttcatcccgg tgcgccgatt caaacgaaac
     8101 cgcccctatc attgcggagc gcggggcgtg ccgtacacgc gggattttat agtg
//
LOCUS       DAWKJW010000081         8143 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.081, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000081 DAWKJW010000000
VERSION     DAWKJW010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8143)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8143)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8143
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.081"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            112..420
                     /locus_tag="WJJ54_001229"
     CDS             112..420
                     /locus_tag="WJJ54_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342099.1"
                     /translation="MTLKTDLLPKINNEDYQRLILKHSAEFSGGEIRLLNEILEKFNF
                     DVVQAQALAQAVMQQIRFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG
                     "
     gene            502..1533
                     /gene="ruvB"
                     /locus_tag="WJJ54_001230"
     CDS             502..1533
                     /gene="ruvB"
                     /locus_tag="WJJ54_001230"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEZ7342100.1"
                     /translation="MLQTDNLTAAQPQRIITAQSISSQEELLERALRPKTLDDYIGQD
                     KAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLER
                     AGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
                     LPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGA
                     EEIAKRSRGTPRIANRLLRRVRDFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRK
                     FLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAY
                     LHFGLPVEK"
     gene            complement(1556..2284)
                     /gene="rpe"
                     /locus_tag="WJJ54_001231"
     CDS             complement(1556..2284)
                     /gene="rpe"
                     /locus_tag="WJJ54_001231"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEZ7342101.1"
                     /translation="MTAYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVP
                     NLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
                     SLIRDMGCQAGLVLNPATPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRV
                     RAMLDRYEAQSGRHIAIEVDGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAM
                     RAELEKSGRLNLAPMIEIEMPSEN"
     gene            2430..2864
                     /locus_tag="WJJ54_001232"
     CDS             2430..2864
                     /locus_tag="WJJ54_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEZ7342102.1"
                     /translation="MPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPLNDFQPNCD
                     IRRLGLTQGQHNELRKIRAAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEAR
                     DYVESRYLSGMDFAVDELEIQHRFFHILTPQQQQMWLSSCLK"
     gene            complement(2877..3740)
                     /locus_tag="WJJ54_001233"
     CDS             complement(2877..3740)
                     /locus_tag="WJJ54_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ7342103.1"
                     /translation="MELNEFFDKAYAVLRRLDAVLPPEPGHTDWNALAFRWQSAGKKG
                     FLEHLPDPHTFPLVRLAGVGRQTELLVRNTEQFIVGRPANNVLMSGARGTGKSSLVKA
                     LLHEYADKGLRLIEVDKSDLIGLPYLLTLLKERPEKFIVFCDDLSFESGDETYKALKT
                     ALDGGLSQRCANVLVYATSNRRHLMPEYFDENAGTTGMRGEIHQKEAVEEKISLSDRF
                     GLWLSFYPFDQNDYLAAVQNWLEDFGVPYDETAQMAALQWAQTRGSRSGRSAWQFACD
                     WAGRLPKQRAL"
     gene            complement(3748..4365)
                     /locus_tag="WJJ54_001234"
     CDS             complement(3748..4365)
                     /locus_tag="WJJ54_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEZ7342104.1"
                     /translation="MFTGIVQGLGKLTAIHRPSEAFHTYVVELPQEAADNLQRGASVA
                     NNGCCLTITEIEGNRVSFDLMAETLAKTNLGLLKEGDCVNIERAARFGDEIGGHVMSG
                     HIMATVPIVEIERDGFNRTVWFSLPHELKPYILTKGFVGLDGCSLTIGKVEDGRFNVH
                     LIPETLERTLFGSRKVGDRINIEIDPNTQAIVDTVERLMAQRYAK"
     gene            complement(4497..5102)
                     /locus_tag="WJJ54_001235"
                     /pseudo
     CDS             complement(4497..5102)
                     /locus_tag="WJJ54_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575380.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
     gene            5308..7080
                     /locus_tag="WJJ54_001236"
     CDS             5308..7080
                     /locus_tag="WJJ54_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite sensor histidine kinase"
                     /protein_id="HEZ7342105.1"
                     /translation="MILPARFSDGISLSLRLKLLTGVWVGLAALSVVLTLLLSLRLEN
                     AASVIEEAGNLRMQAYRLAYMAGEGSPRSQIDNQVDEFEKSLNRISQSDAIHPLIPSD
                     TPLAYDLIQSMLIIDWQAHILPPLQSYRRPTQVDLYRFAGNIELFLQALENANEKNTW
                     WLRRFQWAIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPE
                     FKQVGRCFNQMGGRLKILYDDLEGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQ
                     AAEHFLNRILPAVGADSGRVCLDGGSDVYVSIHHADCGTAASDLGKYHEEIFPIEYQN
                     ETLGRLLLSFPNGISLDEDDRILLQTLGRQLGVSLAGAKQEEEKRLLAVLQERNLIAQ
                     GLHDSIAQALTFLNLQVQMLETAFAENKREEAVENIGFIKTGVQECYEDVRELLLNFR
                     TKISNKEFPEAVADLFARFTQQTGITVETAWENGSFLPPQEAQLQMIFILQESLSNIR
                     KHARATHVKFTLSEHGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIHAV
                     LEIRSQAQQGTTVSLTVASEESLK"
     gene            7077..7733
                     /locus_tag="WJJ54_001237"
     CDS             7077..7733
                     /locus_tag="WJJ54_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEZ7342106.1"
                     /translation="MTIKIILIDDHTLFRSGIKALLSRQHGFEVIGEAADGLSGIKMI
                     NRLQPDVVLLDLDMPGMNGREALSQIISINPQQAVIMLTVSEDSDDLTECMRIGARGY
                     LLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQPAQGTQALSSLTPRELEI
                     LGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSRVQAAVYAIRHNVPQPVPE
                     "
BASE COUNT         2009 a         2372 c         1894 g         1868 t
ORIGIN      
        1 tgttaatcca ctataaagtt ttgaggacga tacccaatcc aagctttgca acagccgccg
       61 ccatatccgc tataattcac gcttcagcca ttccgccccc gacataaaat catgaccctg
      121 aaaaccgatt tattgcctaa aatcaacaac gaagattatc aacgcctcat cctcaaacac
      181 agtgcggaat ttagcggtgg cgaaatccgc ctgttgaacg aaatcctcga aaaattcaat
      241 ttcgacgttg ttcaggcgca ggcattggcg caagccgtca tgcagcaaat ccgcttcgac
      301 cccaacgcct atcacatcga cagcgatgac gaagacacca caggcatctg cccacactgc
      361 atcaatccgc ccatgccgcc cctgcgcgat tacctcgttt ggcgcgaaac gcgcggataa
      421 aacgcttttg accgttatct tttcaatgcc gtctgaaacg ccgccgaccg ttcagacggc
      481 atacccgaca aagggaacac tatgctgcaa accgacaacc taaccgctgc ccagccccag
      541 cgcatcatca ctgcccaaag catctcctca caagaagagt tgctcgaacg tgccctgcgt
      601 cctaaaacgc tggacgacta tatcgggcaa gacaaagcca aagaacagct tgccattttc
      661 atccaagccg ccaaaaaacg cggcgaagca ctcgaccacg ttttgctctt cggcccgccc
      721 ggactgggca aaaccacact ggcgcacatc atcgccaaag aattgggcgt aaatttgcgc
      781 caaaccagcg gccccgtcct cgaacgcgca ggcgacctcg ccgccctttt gaccaacctt
      841 gatccgcacg atgtattgtt catcgacgaa atccaccgcc tcagccctgt tgtcgaagaa
      901 atcctctatc ccgcgctcga agactaccgg ctcgacatta tgataggcga aggacccgcc
      961 gcccgttccg tcaaaatcga cctgccgccc ttcacgctca tcggcgcgac cacccgcgcc
     1021 ggtatgctga ccaatccgtt gcgcgaccgc ttcggcatcg tctcccgcct tgagttttac
     1081 gaaaaccgag accttaccac catcgtcagc cgttcggcac aactgttgca gctcgatatg
     1141 tccgaagaag gcgcggaaga aatcgccaaa cgcagccgcg gtacgccgcg catcgccaac
     1201 cgcctgttgc gacgcgtgcg cgatttcgcc gacgtgaaaa acaacggcac aatcgacggc
     1261 ggcatcgccg atgccgcttt aagtatgctg gacgtggacg cgcaggggct ggacgtgatg
     1321 gacaggaaat ttctcgaagc cgttttgcac aaattcggcg gcggcccggt cggtttggac
     1381 aatgttgccg ccgccatcgg cgaatctaca gacaccatcg aagacgttat cgaaccctac
     1441 cttatccaac aaggcttcct gcaacgcacc ccgcgcggca ggatggcgac cgaacgcgcc
     1501 tacctgcatt tcgggctgcc cgtcgaaaaa taacgcaatg ccgtctgaaa cagagctaat
     1561 tttcagacgg catttctatt tcaatcattg gcgcaaggtt cagcctgccg cttttttcca
     1621 gttccgccct catcgcatca atcaccgcct tatagtctgg tttgccgaaa atcgcagaac
     1681 cggcaacaaa ggtatccgca ccagctcggg caacggcggc aatattgtcg gttttgatgc
     1741 cgccgtccac ttcgatggcg atgtgccgcc cgctttgtgc ttcgtaccga tccagcatcg
     1801 cccgcacccg gcggattttt tcaagggtgt gcgggatgaa gctttgtccg ccgaatccgg
     1861 ggttgaccga catcagcaaa accatatcca gcctgtccaa tacgttttcc aacagatata
     1921 cgggcgttgc cggattcaac accagccccg cctgacagcc catatcacga atcaggctca
     1981 agctgcggtc gatatggcgg ctcgcctcgg gatggaacgt gatgattgat gctcctgctt
     2041 tggcaaacga ctgaatcagg tcgtcaacgg gttcgaccat cagatgcaca tcaatcggca
     2101 cgcttgcata aggcttcaac gccgcgcaaa ccatagggcc gaaggtcagg ttcggcacat
     2161 aatggttgtc catcacgtca aaatggatca gatctgcacc tgccgcaatg acgctttcca
     2221 cctcttctcc aaggcgggca aagtctgccg acaaaatact gggtgcgata cggtaggcgg
     2281 tcatattttt tccttcaatg cctttacggg cggactcaac gcgggaaagc cccgaaacag
     2341 cattattaac aaaagttaac tgccataata ccatctttca cacggcaatc aagtatattg
     2401 tccgaaatat ctggattaaa ggaaaagccg tgccactgcc cgctccctgc cgtttcgcca
     2461 aacctgccgc ctctttttta agtatggctt tgctttcctg ccagctttcc cacgccgcca
     2521 cggcttatat ccccctgaac gattttcaac cgaactgcga catacgccga ctcggactga
     2581 cacagggtca gcacaatgaa ctgcgtaaaa tccgcgccgc cttcaaaatg gcgggcgaca
     2641 gggcgcgttt gaaggttatg cattccgaac acagccgccg ccggtctgtc gtcgaaatca
     2701 tttcttcgga tgtttttaat cggaacgagg cgcgcgatta tgtcgaaagc cgctatttgt
     2761 ccggtatgga ttttgcggtg gacgaattgg aaatccaaca ccgcttcttc catatcctca
     2821 caccgcaaca gcagcaaatg tggctttctt cctgcctcaa ataatccccg aaacgctcac
     2881 aacgcccgtt gtttcggcag cctgcccgcc cagtcgcagg caaactgcca cgcggaacgt
     2941 cccgaacggc tgccccgcgt ctgcgcccac tgcaatgccg ccatctgtgc ggtttcatca
     3001 tacggcacgc cgaaatcttc cagccaattt tgcaccgccg ccagataatc gttttgatcg
     3061 aacggataaa aactgagcca caatccgaat cggtcggaca gggatatttt ttcttccacc
     3121 gcttctttct gatggatttc cccccgcatc cccgtcgtac cggcattctc gtcaaaatat
     3181 tcgggcatca ggtgccgtct gttggaagtc gcgtaaacca aaacgttggc gcaacgttga
     3241 gacagaccgc cgtctaacgc ggttttcaat gccttatagg tttcatcgcc gctttcaaac
     3301 gacaaatcgt cgcaaaatac gataaatttt tccggacgtt ccttcaaaag cgtcaacagg
     3361 taaggcaggc cgattaaatc gcttttatcg acttcgatca ggcgcaatcc cttatccgca
     3421 tattcgtgta gcagggcttt gaccagcgag gatttgcctg ttccgcgcgc gccgctcatc
     3481 aatacattgt tcgcgggtct gccgacaatg aactgttcgg tattacgcac cagcaattcg
     3541 gtttgcctgc cgactcccgc cagccttacc aagggaaagg tgtgcggatc gggcaagtgt
     3601 tccaaaaaac cttttttgcc cgcactctgc cagcggaagg caagcgcgtt ccaatccgta
     3661 tgcccgggtt cgggcggaag cacggcatcc aaacgccgca aaacggcata ggctttatcg
     3721 aaaaattcgt tcaattccat ctctacctca ctttgcatat ctttgcgcca tcagccgttc
     3781 gacggtgtcg acgattgcct gcgtattcgg atcgatttcg atgttgatcc tgtcgccgac
     3841 ctttctgctg ccgaacagcg tccgttccaa agtttcggga atcagatgga cattgaaacg
     3901 gccgtcttcg actttgccta tggtcaggct gcaaccgtcc aagccgacga accctttggt
     3961 caggatatag ggtttgagtt catgcgggag cgaaaaccaa accgtgcggt tgaacccgtc
     4021 ccgttcgatt tcgacaatag gcacggttgc cataatgtgt ccgctcatga cgtgtccgcc
     4081 gatttcgtct ccgaaacgcg ccgcccgttc gatgttgacg caatcgcctt ccttcagcag
     4141 ccccaaattg gtttttgcca aagtttccgc cattaaatcg aaactaacgc ggtttccttc
     4201 gatttcggta atcgtcaggc agcagccgtt attggcaacc gatgcgccgc gttgcagatt
     4261 gtccgccgcc tcttgcggaa gctcgacgac ataagtgtga aatgcctccg acgggcggtg
     4321 gattgccgtc agttttccca agccttgaac aatgcctgta aacataatcc tgttttcctg
     4381 tgtcggtaaa atggtgcaaa ttgtagcatc tccccgcgaa aaatgccgtc tgaaatgcct
     4441 tcagacagca ttatgcctcc gattcgggca aaaaccgccc ggtacggctt gacctttcct
     4501 ttctcggttt gcgtgttcaa gtcggcaaaa tgcccgtcaa actcgaatct gaccgaccgc
     4561 gccctttgct gctgcaacca gcttcttaat gttttcatac ccgaaaacag atagggaatc
     4621 gcgctttgca gaatctgcgg gcggatatac ataatgttgt agtgcatcgt tatcggcgtt
     4681 tccacataat acgcattgca caacggtgtg cgtttcgaca cggtttcaaa cctcgccacc
     4741 aaatcgcccg gcagatacgg catatcgcac ggcacaacca aaagccagtc ggcagtcgcc
     4801 aactgcaaat cgttggctgc ggtacacaat gccgaaagcg ggccgaaatg ctgccactgc
     4861 cgtgcgtccg gaaaaatatg cggacttctt cgagcatatt cttccaaatt ccggttggtg
     4921 ctgatggcga tatggctgac ctgcggcctg accctgtcga tgacatgatc tatcagtgcc
     4981 ttacccccca aaagagcaag ccctttgtcc tcgcctccca tacggctcgc ctgaccgccg
     5041 gccagtatca gggcaaaagt tttcattgcg gatgctctct tggaaaagtt cgaggttttc
     5101 atgattgcag tctgccgttc ccaatgactc aaaatgccgt ctgaagcaga cggcaaataa
     5161 attcatatta tctgaatttt atcataacat gatttaacac tgaagcggta cggattatgt
     5221 tttccttaac caattctttc tgagcagttg tatctaatcc caaagaatga tattgtttgc
     5281 attatttaga acaatttttc gccgagcatg atactgccag cccgtttttc agacggcatc
     5341 agcctttccc tacgcctgaa actcctgacc ggagtgtggg tcgggttggc ggcattgtct
     5401 gtcgttttga cactgctgct ctctttgcgt ctggaaaacg cggcctccgt catcgaagag
     5461 gcgggcaact tgagaatgca ggcataccgt ctggcataca tggcgggtga aggatctccc
     5521 cgctcccaaa tagacaatca ggttgacgaa tttgaaaaaa gcctgaatcg tatttcacaa
     5581 agtgatgcca tccatccgct gattccttcg gacacccctc ttgcttatga tttgatacaa
     5641 tccatgctga ttatagattg gcaggcacac atcctccccc cgctccagtc ctaccggcga
     5701 ccgactcagg tcgatctcta ccgctttgcc ggaaacatcg aactgttttt gcaggcattg
     5761 gaaaatgcca acgaaaaaaa cacatggtgg ctcaggcgtt ttcaatgggc aattatgttg
     5821 atgacgctgg tgtcgtctgt actgatgctg ttttggcacc agatttgggt tatccggccg
     5881 ctgcaggcgt taagggaagg tgcggaacgc atcggacgga ggtgtttcga tattccggtt
     5941 cccgaaggcg gtacgccgga attcaaacag gtcgggcgtt gtttcaatca aatgggcggc
     6001 aggttgaaaa ttttatatga tgatttggaa ggacaagtcg ccgagcagac acgcagtctc
     6061 gaaaaacaaa atcaaaacct gaccctgctg taccaaacta cacgggacct gcaccaatcc
     6121 tacataccgc aacaggctgc agaacatttt ctaaaccgta tcctgcccgc cgtaggagca
     6181 gattccggca gagtttgttt ggacggcgga tccgatgttt atgtttccat tcatcatgcg
     6241 gattgcggca cagcagcttc ggatttgggg aagtaccatg aggaaatctt ccccattgag
     6301 taccagaacg aaacattggg caggctgttg ctcagctttc caaacggcat ttctcttgat
     6361 gaagacgacc gcatcctgct tcaaacacta ggcaggcaat tgggcgtatc gcttgccggc
     6421 gcaaaacagg aggaagaaaa acgcctgctt gcagtattgc aggaacgcaa cctgattgcg
     6481 caaggattac atgacagcat cgcacaagca ttaacgttcc taaacctaca ggtacagatg
     6541 ctggaaaccg cctttgccga aaacaaacgg gaggaagccg tagaaaacat cggcttcatc
     6601 aaaacaggcg tgcaggaatg ttatgaagat gtccgcgaac tgctgctcaa cttccgtacc
     6661 aaaatcagca ataaagaatt tcccgaagcc gttgccgacc tattcgcccg ctttacgcaa
     6721 caaaccggga taacggtcga aaccgcctgg gaaaacggtt cgttcctgcc gcctcaggaa
     6781 gcgcagctcc aaatgatttt tatcctgcag gaaagcctgt ccaacatccg caaacacgcc
     6841 cgcgccaccc atgtaaaatt caccctttcc gaacacggcg gacgctttac catgaccatc
     6901 caagacaacg gacaaggttt cgacacggag aaaataggag aacccacggg cagccatgtc
     6961 ggactgcaca tcatgcagga gcgtgccaaa cgcatccatg ccgttttaga aatccgttcc
     7021 caagctcaac agggaaccac cgtctcattg acggttgcat ctgaagaaag cttgaaatga
     7081 ctattaaaat tattctgata gacgaccata ccctcttccg cagcggcatt aaagcccttt
     7141 tgtcgcgcca acacggtttt gaagtcatcg gcgaagccgc agacggcctc tcgggcatta
     7201 aaatgatcaa ccggctccaa cccgatgtcg tcctgcttga ccttgatatg cccggtatga
     7261 acggacgcga agcactctcc caaatcatca gcatcaatcc gcagcaggca gtgattatgc
     7321 tgaccgtttc cgaagacagc gacgatttga ccgaatgtat gcgcatcggc gcgcgcggct
     7381 acctgctgaa aaacatcaac gccgactttc tgctcgaaag catacgcaaa gccgccgaag
     7441 gcgataatgt attctcgccc gagatgaccg ccaaactcgt caaaagcctg atttcccccc
     7501 aacctgccca agggacgcag gcactctcct cacttacccc tcgtgaactg gaaatcttgg
     7561 gctatctcgc cgcaggacac agcaacaaaa tcatcgcccg ccacctcgat cttgccgaat
     7621 ccaccgtcaa agtccacgtt caaaacctgc tccgcaaact caacctcagc agccgggtgc
     7681 aggccgccgt ttacgccatc cggcacaacg tcccccaacc tgtgccggaa taggcgttca
     7741 gacggcatat taggggtttt aatccccgta cggtcattcg gataacagac caagcatgta
     7801 agtttatgcc cccataagta cgcttggcat agcagtaata ttgttcggtt cagtgttttc
     7861 cgtttgcccc tatctgatac tgcaatatca gctatgccgt ctgaaaacgc atcatcatga
     7921 tattttcaga cggcataata aaaagcggaa atactaatgc agggtaaaat gttccattcc
     7981 gaatcccata aatatacaat ggcttatatc gtttaagcat gtgtaaccca ccctcatatc
     8041 aatcaatata tagtggatta acaaaaacca gtacggcgtt gcctcgcctt gccgtactat
     8101 ctgtactgtc tgcggcttcg tcgccttgtc ctgatttttg tta
//
LOCUS       DAWKJW010000082         8135 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.082, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000082 DAWKJW010000000
VERSION     DAWKJW010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8135)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8135)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8135
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.082"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            110..1051
                     /gene="miaA"
                     /locus_tag="WJJ54_001238"
     CDS             110..1051
                     /gene="miaA"
                     /locus_tag="WJJ54_001238"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEZ7342107.1"
                     /translation="MPTPKAFALLGPTACGKTALALKIAETLPVEIISLDSALVYRDM
                     DIGTAKPSHAERSFVPHHLIDIITPVQTYSAARFVEDCTRLIGEITARGKYPLIVGGT
                     MMYFRALTQGLNDLPEADACLRADLDEQKQMYGLDFLYRTLQKVDPETACRLKPNDSQ
                     RIGRALEVYYLTGKPMSTHLGSPTSHTLPFDLHTAALIPENRARLHENIALRFHLMLE
                     QGFIGEVENLRRLYPSLTADSPAIRCVGYRQAWEYLDGKTDFPAFVEKGIAATRQLAK
                     RQLTWLRKTPLDCVTDPFSDGNSCTRLIEAAKRFFGA"
     gene            1055..1774
                     /locus_tag="WJJ54_001239"
     CDS             1055..1774
                     /locus_tag="WJJ54_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family DNA transformation protein"
                     /protein_id="HEZ7342108.1"
                     /translation="MLTTPPLAPKTVAALHRLGIRTLEELRQNGAVQTFLLLKASGLT
                     LTKSTLWQLQSLLDGTPPQEMAQHDKTRLLAELKNHPPVAAFPPQGEMAHFMGLALEQ
                     AKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEMQNYRLD
                     GCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHTAIRG
                     GILQEECRAVLSRFFQNKRKG"
     gene            1779..2267
                     /locus_tag="WJJ54_001240"
     CDS             1779..2267
                     /locus_tag="WJJ54_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HEZ7342109.1"
                     /translation="MTALLVILALALIAAGTAGIVYPALPGLALMFAGTWLLAYSGGY
                     QIYGAGVLWTVGLISLAGILADYVAGIWGTKYTGAGKLAVRGALVGSIIGMFFSLPGL
                     ILGPFIGAAAGELIDRRNMLQAGKAGLGTLLGLVVGTAFKIGCAVSILFILLVKYIAY
                     LF"
     gene            2333..3085
                     /gene="rlmB"
                     /locus_tag="WJJ54_001241"
     CDS             2333..3085
                     /gene="rlmB"
                     /locus_tag="WJJ54_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEZ7342110.1"
                     /translation="MANQRPIYGFHAVNARLWQNPKSIVELYVQEGKNDVRTREVLEK
                     AANENIRVYFADADRLNAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILD
                     GITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVASGAAETVPYITVTNLAR
                     TLRELKEYGIWIIGTDMGGNADLYHCDLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP
                     MFGTVESMNVSVSAGMVLSETRRQRVLKNEKA"
     gene            complement(3147..4538)
                     /locus_tag="WJJ54_001242"
     CDS             complement(3147..4538)
                     /locus_tag="WJJ54_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HEZ7342111.1"
                     /translation="MSGHMGKGADAPDLVYGLEDRPPFGNALLSAVTHLLAIFVPMIT
                     PALIVGGALELPVEMTAYLVSMAMVASGVGTYLQVNRFGPVGSGMLSIQSVNFSFVTV
                     MIALGAGMKEGGLTKDAMISTLLGVSFVGAFLVCFSAWLLPYLKKVITPTVSGVVVML
                     IGLSLVHVGITDFGGGFGAKADGTFGSMENLGLASLVLLIVLIFNCMKNPLLRMSGIA
                     VGLIAGYIVALFLGKVDFSALQNLPLVTLPVPFKYGFAFDWHAFIVAGAIFLLSVFEA
                     VGDLTATAMVSDQPIEGEEYTKRLRGGVLADGLVSVIATALGSLPLTTFAQNNGVIQM
                     TGVASRHVGKYIAVILVLLGLFPVVGRAFTTIPSPVLGGAMVLMFGLIAIAGVRILVS
                     HGIRRREAVIAATSVGLGLGVAFEPEVFKNLPVLFQNSISAGGITAVLLNLVLPEDKT
                     EAAVKFDTDHLEH"
     gene            4845..5720
                     /locus_tag="WJJ54_001243"
     CDS             4845..5720
                     /locus_tag="WJJ54_001243"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEZ7342112.1"
                     /translation="MLQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGT
                     TGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLS
                     VVPYYNKPSQEGMYRHFKAVAEAAAIPMILYNVPGRTVVSMNNETILRLAEIPNIVGV
                     KEASGNIGSNIELINRAPEGFAVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMC
                     RAALQVDIALARELNNRLIPIYDTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTEG
                     GQAKVRAALKASGQL"
     gene            5729..6925
                     /gene="bamC"
                     /locus_tag="WJJ54_001244"
     CDS             5729..6925
                     /gene="bamC"
                     /locus_tag="WJJ54_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HEZ7342113.1"
                     /translation="MPSEPFGRHNATNTLISITQDDTMTLIKPVIAALALIGLAACSG
                     SKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPAGSGAVRASDLEKRRTPAVQ
                     QPADAEVLKSVKGVRLERDGSQRWLVVDGKSHAEIWPLLKAFWQENGFDIKSEEPAIG
                     QMETEWAENRAKIPQDSLRRLFDTVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHK
                     AMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAENASAKKPTFPAAN
                     EMARIEGKSLIVFGDYGRNWRRTALALDRIGLTVVGQNTERHAFLVQKAPNESNAVTE
                     QKPGLFKRLLGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAGKDASALLGK
                     LHSELR"
     gene            complement(6982..7914)
                     /gene="pip"
                     /locus_tag="WJJ54_001245"
     CDS             complement(6982..7914)
                     /gene="pip"
                     /locus_tag="WJJ54_001245"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HEZ7342114.1"
                     /translation="MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAG
                     ASPECRGFFNPDVFRIVIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWL
                     VFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETVWLNEAGGVSRIYPEQWQKF
                     VAPIAENRRNRLIEAYHGLLFHQDEEVCLSAAKAWADWESYLIRFEPEEVDEDAYASL
                     AIARLENHYFVNGGWLQGDRAILNNIGKIRHIPTIIVQGRYDLCTPMQSAWALSKAFP
                     EAELRVVQAGHRAFDPPLVDALVQAVEDILPHLL"
BASE COUNT         2089 a         2648 c         1907 g         1491 t
ORIGIN      
        1 aaggcatacg gtaaacacgc ccccttgccg tcggcgtgct tccgcaaacc aaaatataac
       61 gtcggcacgc tttccgctat aatccgtatt tttccaaacc tgaaacgtta tgccgacccc
      121 gaaagccttt gccctgctcg ggccgaccgc ctgcggcaaa accgcgctcg ccctcaaaat
      181 tgccgaaacc ttgcctgtcg aaatcatcag cctcgattcc gcgctggttt accgcgatat
      241 ggacatcggc acggcgaaac cgtctcatgc cgagcgttcc tttgtaccgc accaccttat
      301 cgacatcatt acgcctgttc agacatacag tgccgcccgt tttgtcgaag actgcacgcg
      361 tctgattggc gaaatcacgg cgcgtgggaa atatccgctg attgtcggcg gcacgatgat
      421 gtatttccgc gccctgaccc aaggtttgaa cgatttgccc gaagccgacg cctgcctgcg
      481 tgccgacttg gacgaacaaa aacaaatgta cggcttggat ttcctctacc gcaccctgca
      541 aaaagtcgac cctgaaacag catgccgtct gaaaccgaac gacagccagc gtatcggacg
      601 cgctttggaa gtttattatt taaccggcaa accgatgagt acgcatctcg gcagcccaac
      661 ctcccatacg ctccccttcg atttgcatac cgccgccctg attcccgaaa accgcgcccg
      721 cctgcatgaa aacatcgccc tgcgtttcca cctgatgctt gaacagggct ttatcggcga
      781 agtagaaaac ctgcgccgcc tctatcccag cctgaccgcc gactcccctg ccatacgctg
      841 cgtcggctac cgtcaggcat gggaatatct ggacggaaaa accgatttcc cggcatttgt
      901 cgagaaaggc attgccgcca cgcgccaact tgccaaacgc caactgactt ggttgcgcaa
      961 aacaccttta gactgcgtta ccgacccgtt ttcagacggc aattcatgca cacgcctgat
     1021 tgaggcggca aaacggtttt tcggcgcata aactatgctg accacgccgc cgctcgcccc
     1081 caaaaccgtc gccgccctac acaggctcgg tatccgtacg ctcgaagaac tgcggcaaaa
     1141 cggcgcggtt caaaccttct tgttattgaa ggcatcaggt ttgaccctca cgaaaagcac
     1201 gctgtggcag cttcagtcgc tgctggacgg cacgccgccg caagaaatgg cgcaacacga
     1261 taaaacccgc ctgcttgccg agttgaaaaa ccatccgccc gtcgccgcct ttcccccgca
     1321 aggcgaaatg gcgcatttca tgggtttggc attggaacag gcgaaactgt ccgcattaat
     1381 gggcgaaata cccgtcgggg cagtcatcgt ttcagacggc aaaatcatcg catcggcaca
     1441 caacacctgc attgccgact gcaatgtcag ccggcacgcc gaaatcaacg ccttggcaca
     1501 ggcaggcagc gaaatgcaaa actaccgcct tgacggatgc gacatctaca tcaccctcga
     1561 accctgcgcc atgtgcgcgt ccgcactgat acaggcacga atcaggcgcg tgatctacgg
     1621 tgcggcagaa cccaaaaccg gcgcggcagg aagcatcgtc aacctgtttg ccgacaaacg
     1681 cctcaatacg cacaccgcca tacggggcgg aatcctgcaa gaagaatgcc gcgccgtatt
     1741 aagccgtttt ttccaaaaca aaagaaaagg ttgaacctat gaccgccttg ctcgtcatcc
     1801 tcgccctcgc cctgatagcc gccggtacgg cgggcatcgt ttaccccgcc ctgcccggat
     1861 tggcattgat gtttgccgga acctggctgc tcgcctactc cggcggctac caaatctacg
     1921 gcgcgggcgt tttgtggacg gtcggactca tcagccttgc cggcatactg gcggactatg
     1981 tggcaggcat atgggggaca aaatataccg gagcgggcaa gctcgccgtt cgcggcgcat
     2041 tggtcggcag tatcatcggt atgtttttct cccttcccgg actaatactc ggtcccttta
     2101 tcggcgcggc ggcaggcgaa ctgatcgatc ggcgcaatat gcttcaggca ggtaaagcgg
     2161 gcttgggtac gctgttgggg cttgtcgtcg gcacggcgtt caaaatcggc tgcgccgtat
     2221 ccatcttgtt tatcctgttg gtgaaataca tcgcctacct gttttaaccc cttcagacgg
     2281 cataccggca aattgctaca atgccgtctg aacccttttc acaaagcacc atatggcaaa
     2341 ccaaagacct atctacggct tccatgccgt caacgcccga ttgtggcaaa accccaaatc
     2401 catcgtcgaa ctctatgtcc aagaaggcaa aaacgatgta cgcacgcgcg aagtgttgga
     2461 aaaggcggca aacgaaaaca tccgcgtata ttttgccgat gccgaccgcc tcaacgccat
     2521 cagcaaaggt gcgcgccatc agggcgtggt cggatttatc gatgcctcca aaaaccacgt
     2581 ccacctcgaa gacgtattgg aaaacttaag cgaaccgccg ctgctgctga tactcgacgg
     2641 catcaccgat ccgcacaacc tcggcgcgtg cctgcgtacc gccgacgcaa tgggcgtaca
     2701 tgccgtcatc gcaccgaaag acaaaagcgc ggggctgaac gccaccgtca gcaaagtcgc
     2761 cagcggcgcg gcggaaaccg tcccctacat caccgtaacc aacctcgccc gcaccctgcg
     2821 cgagctgaaa gaatacggca tttggatcat cggcaccgat atgggcggca acgccgacct
     2881 ttaccattgc gatctgcccg acagcgcggc atgggtgatg ggcaacgaag gcgacggtat
     2941 gcgccgcctg acacgcgaac attgcgacat gctggtgtcc atacccatgt tcggcacggt
     3001 cgaaagcatg aacgtctccg tgtctgccgg aatggtatta agcgaaaccc gccggcagcg
     3061 cgtattaaaa aacgaaaaag cgtaagcctc aaaaacaatg ccgtctgaaa cagggattct
     3121 gtttcagacg gcattcgttt tcaaaatcag tgttccaagt ggtcggtatc aaacttgacc
     3181 gccgcctcgg ttttatcttc gggcaagacc aaattcagca agactgccgt aatgccgccg
     3241 gcggaaatag agttttggaa caagacaggc aggtttttaa acacttccgg ctcaaacgcg
     3301 acacccaagc ccaaaccgac cgacgttgcc gcaattaccg cttcgcgcct gcggatgccg
     3361 tggctgacca aaatccgcac gcccgcaatc gcaatcaagc cgaacatcaa aaccatcgcg
     3421 ccgcccaaca ccggactcgg aatcgtcgta aacgcgcgtc cgacaacggg gaacagaccc
     3481 aacagcacca aaatcacggc aatatatttg cccacatggc gcgaagccac gccggtcatc
     3541 tgaatcacgc cgttgttttg cgcaaacgtc gtcagcggca gcgaacccaa agccgtcgca
     3601 atcaccgaca ccaagccgtc agccaacacg ccgccgcgca ggcgtttggt gtattcctcg
     3661 ccttcaatcg gctgatcgga caccattgcc gtcgccgtca aatcgccgac cgcctcaaac
     3721 acgctcaaca ggaaaatcgc gcccgccaca ataaatgcgt gccagtcgaa agcaaaaccg
     3781 tatttaaacg gtacgggcag cgtaaccagc ggcaggtttt gcagcgcgga aaaatccacc
     3841 ttgcccaaaa acagcgcgac aatgtaaccg gcaatcagac cgaccgcgat gccgctcatc
     3901 cgcaacagcg ggtttttcat gcagttgaat atcaacacaa tcagcaacac cagcgaagcc
     3961 agccccaagt tttccatcga gccgaacgtg ccgtccgcct tcgcgccgaa gccgccgccg
     4021 aaatcggtaa taccgacgtg taccaaactc aagccaatga gcatcacgac cacgccgctg
     4081 accgtcggcg taatcacttt tttcaaatac ggcaaaagcc acgccgagaa acacaccaaa
     4141 aacgcgccga caaacgatac acccaagagc gtcgaaatca tcgcatcctt agtcaaaccg
     4201 ccctccttca tccctgcgcc cagcgcaatc atcacggtaa cgaacgaaaa attcaccgac
     4261 tggatggaca gcatccccga accgaccggc ccgaagcggt tgacctgcaa ataagtgccg
     4321 acacccgacg caaccatcgc catcgacacg agatacgccg tcatctccac cggcaattcc
     4381 agcgcgccgc ccacaatcag cgcgggcgta atcatcggca caaaaatcgc caaaagatgg
     4441 gtaaccgcgc tcaagagcgc attaccgaac ggcggcctat cctccaaacc gtacaccaaa
     4501 tcaggcgcat ccgccccttt tcccatatga ccgctcataa tgtttccttg cttcaaatgt
     4561 tgaaaaaacc aaagcgcgga ttgtagcgaa tccgccatac cgcttcaatt tcgatttcgg
     4621 acggcatacg cgcccgtccg gcaaacagat tccgaaccgt cgccgccgga atatcgttta
     4681 caaaaggcaa taacctgatt tcaaacacaa aaatacaaac ccgacgcatc cgccgtcaag
     4741 ccgccccgct catcccggac ccgccggatt tcacacctgc ggtaaagtag gctacaatcg
     4801 gaagcattac cgccccctac accacaactg ataaaaggtt ctgtatgtta caaggtagcc
     4861 tggttgccct gattaccccg atgaatcaag acggcagcat ccattacgaa caactccgcg
     4921 acttaatcga ctggcacatt gaaaacggca cggacggcat cgtcgccgtc ggcacgacag
     4981 gcgaatccgc caccctctcc gtcgaagaac acaccgccgt catcgaagcc gtcgtcaaac
     5041 acgttgccaa acgcgtcccc gtcatcgccg gcacaggggc aaacaacacc gtcgaagcca
     5101 tcgccctttc ccaagccgcc gaaaaagccg gggcggacta caccctctcc gtcgtcccct
     5161 attacaacaa accttcgcaa gaaggcatgt accgccattt caaagccgtt gccgaagccg
     5221 ccgcgattcc gatgatactc tacaacgtac ccggcagaac cgtcgtcagc atgaacaacg
     5281 aaaccatcct gcgccttgcc gaaatcccca acatcgtcgg cgtgaaagaa gccagcggca
     5341 acatcggcag caacatcgaa ctcatcaacc gcgcgcccga aggcttcgcc gtcctttccg
     5401 gcgacgacca tacagccctg ccgttcatgc tctgcggcgg acacggcgtg attaccgtag
     5461 ccgccaacgc cgcgcccaag ctctttgccg atatgtgccg cgccgcgctg caagtcgaca
     5521 ttgccctcgc acgcgaactc aacaaccggc tgattccgat ttacgacacc atgttctgcg
     5581 aacccagccc cgccgcgccg aaatgggcgg tatccgcctt gggcagatgc gaaccgcacg
     5641 tccgcctgcc gctcgttccg ctgacggaag gcggacaggc aaaagtccgc gccgccctga
     5701 aagcctcagg acaactctaa atataactat gccgtctgaa ccgttcggac ggcataacgc
     5761 aacaaacact ttaatatcca tcacacagga tgacacgatg acccttatca aacccgtcat
     5821 tgccgcgctc gcactcatcg ggcttgccgc ctgctccggc agcaaaaccg aacagcccaa
     5881 gctcgactac caaagccggt cgcaccgcct gatcaaactc gaagtcccac ctgatttgaa
     5941 caaccccgac caaggcaacc tctaccgcct gcctgccggt tcgggcgccg tccgcgccag
     6001 cgatttggaa aaacgccgca cacccgccgt ccaacagcct gccgatgccg aagtattgaa
     6061 aagcgtcaaa ggtgtccgcc tcgagcgcga cggcagccaa cgctggctcg ttgtcgacgg
     6121 caagtctcat gccgaaatct ggccgctcct gaaagccttt tggcaggaaa acggcttcga
     6181 catcaaatcc gaagaacccg ccatcggaca aatggaaacc gagtgggcgg aaaaccgtgc
     6241 caaaatcccc caagacagct tgcgccgcct attcgacaca gtcggtttgg gcggcatcta
     6301 ctccaccggc gagcgcgaca aattcatcgt ccgtatcgaa cagggcaaaa acggcgtttc
     6361 cgacatcttc ttcgcccaca aagccatgaa agaagtgtac ggcggcaaag acaaagacac
     6421 gaccgtatgg cagccctccc cgtccgatcc caacctcgaa gccgctttcc tgacgcgctt
     6481 tatgcaatat ttgggcgttg acggacagca ggcggaaaac gcatcggcaa aaaaacctac
     6541 ctttcccgcc gccaacgaaa tggcgcgtat cgaaggcaaa agcctgattg tctttggcga
     6601 ctacggcaga aactggcggc gcaccgcgct cgccctcgac cgcatcgggc tgaccgtcgt
     6661 cggtcaaaac accgaacgcc acgctttcct ggttcaaaaa gccccgaacg aaagcaatgc
     6721 agttaccgaa caaaaacccg gcctgttcaa acgcctgctg ggcaaaggca aagcggagaa
     6781 acctgccgaa cagccggaac tgattgtcta tgccgagcct gtcgccaacg gctcgcgcat
     6841 cgtcctgctc aacaaagacg gcagcgcata tgccggcaaa gacgcatccg cattattggg
     6901 caaactccat tccgaactgc gttaaaccat tcaaaacaaa agcagcttcc aaacagaagc
     6961 tgctttttta tgcggaactt tttacaacaa atggggcaaa atatcctcaa ctgcctgaac
     7021 caacgcatcc accaaaggcg gatcgaacgc acgatgccct gcctgaacca ccctcaattc
     7081 cgcttcggga aaggctttcg acagcgccca cgcactctgc atcggcgtac acaaatcata
     7141 ccgcccctgt acgataatag tcgggatatg ccgtattttg ccgatattgt tcaaaatcgc
     7201 cctatcgccc tgcaaccaac cgccgttgac aaaataatgg ttttccaaac gcgcgattgc
     7261 cagcgaggca taagcatctt catccacttc ctccggctcg aaacggatca gatagctttc
     7321 ccaatccgcc caagccttcg cggcagacag gcacacttct tcatcttgat gaaacagcaa
     7381 tccgtgatac gcctcaatca gccggttccg ccgattttca gcaatcggcg cgacaaattt
     7441 ttgccattgt tccggataaa tccggctcac accgcccgcc tcgttcagcc acaccgtttc
     7501 agacggtctg cacaaaaata tcccgcgcaa caccaatccc tttacccgtt caggatgggt
     7561 ttgggcataa gccagcgaca aagtgctgcc ccacgaaccg ccgaacacca gccatttccc
     7621 gatacccagc atttcacgga ctttttcaat atccgccacc aaatcccaag tcgtattgtc
     7681 ttccgcacaa gcatacgggc gcgaacgtcc gcaaccgcgc tggtcgatga tgacgatgcg
     7741 gaacacatcg ggattgaaaa aaccccgaca ttcaggcgaa gcccccgcgc ccggcccgcc
     7801 gtgtaaaaaa ataaccggca caccgtcggg attgcccgat tcctcccaat aaatttgatg
     7861 aatttcagac acctgcaagt atccgctatg aaaaggctgt tttatctcat acatcatctt
     7921 ctcccatatt gcttctgaca atccgaacat tcccacacgc aacatcacgc acgagacaca
     7981 agccgccccg aaaggcaaat gccgaaaaat cgcgatatag tgaattaaca aaaatcagga
     8041 caaggcgacg aagcctcaga cagtacagat agtacggaac cgattcactc gtgcttcagc
     8101 accttagaga atcattctct ttgagctaag gcgag
//
LOCUS       DAWKJW010000083         8021 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.083, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000083 DAWKJW010000000
VERSION     DAWKJW010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8021)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8021)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8021
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.083"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(68..814)
                     /locus_tag="WJJ54_001246"
     CDS             complement(68..814)
                     /locus_tag="WJJ54_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEZ7342115.1"
                     /translation="MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLLLALAR
                     LIHLEKAGAPMRVLAWALRKVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILV
                     SGEAAIALRRGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQ
                     AMRYVILPQALRRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPL
                     YTVALIYLLMTTFLGWIFLRLEKRYNPQHR"
     gene            complement(993..1664)
                     /locus_tag="WJJ54_001247"
     CDS             complement(993..1664)
                     /locus_tag="WJJ54_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEZ7342116.1"
                     /translation="MQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVLGAAG
                     DAGSDAPARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQA
                     YGTRSRDNLRAAAEGRKVSVRVFDTDRYQREVAQVSVGKTDLNLMQVQDGAAWHYKSY
                     AKEQQDKADFADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDAVGE
                     WLGIW"
     gene            complement(1733..2404)
                     /gene="rpiA"
                     /locus_tag="WJJ54_001248"
     CDS             complement(1733..2404)
                     /gene="rpiA"
                     /locus_tag="WJJ54_001248"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEZ7342117.1"
                     /translation="MTTQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSG
                     KKIKGAVSTSKKSSELLAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHL
                     NEKIVASASEKFICIADESKYVSRLGKFPLPVEVVESARSLVSRKLLAMGGQPELRIG
                     YTTFYGNQIVDVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI
                     YPCQG"
     gene            complement(2481..2963)
                     /locus_tag="WJJ54_001249"
     CDS             complement(2481..2963)
                     /locus_tag="WJJ54_001249"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HEZ7342118.1"
                     /translation="MTNIRIGQGYDVHQLTEGRKLILGGVEIPFEKGLLGHSDADALL
                     HAVTDALLGAAGLGDIGSHFPDTAAEFKDADSRVLLRAAYQSVQAQGWQAVNVDTTVI
                     AQKPKLAPHIPQMRANIAADLGIDISCVNIKGKTNEKLGYLGRMEGIEAQAAVLLVRI
                     "
     gene            complement(2995..3684)
                     /locus_tag="WJJ54_001250"
     CDS             complement(2995..3684)
                     /locus_tag="WJJ54_001250"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HEZ7342119.1"
                     /translation="MKRKNIALIPAAGIGARFGADKPKQYVEIGSKTVLEHTLGIFER
                     HEGVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAET
                     DNILVHDAARCCLPSEALTRLIEQAGNAAEGGILAIPVADTLKRADGGNISATVERTS
                     LWQAQTPQLFRAGLLHRALAAENLDGITDEASAVEKLGIHPLLVQGDARNLKLTQPQD
                     AYIVRLLLDAV"
     gene            complement(3681..4415)
                     /gene="dnaQ"
                     /locus_tag="WJJ54_001251"
     CDS             complement(3681..4415)
                     /gene="dnaQ"
                     /locus_tag="WJJ54_001251"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HEZ7342120.1"
                     /translation="MTTRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLY
                     VHPERDMPEEAARVHGLTIEVLEGKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFL
                     NMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALI
                     DCELLGEVYLAMTRRQFDLMGAAAEEKMETKPVVHTETKRSGKLKVIRADENELAEHG
                     QYLDGLGEACIWRKEAVPSENGGTDA"
     gene            complement(4571..5881)
                     /locus_tag="WJJ54_001252"
     CDS             complement(4571..5881)
                     /locus_tag="WJJ54_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ7342121.1"
                     /translation="MYAKKGGLGLVKSRRFAPLFATQFLGAFNDNVFKTALFVMIGFY
                     GLGQNGFLPAGQMLNLGALLFILPYFLFSSLSGQLGNKFDKAVLARWVKVLEMIIMAV
                     AAYGFYIRSAPLLLACLFCMGAQSTLFGPLKYAILPDYLDDKELMMGNSLIESGTFVA
                     ILFGQILGTAVAGVPPYIVGILVLLVAVGGTVGSLFMPSVPAKAADTQIEWNIVRGTK
                     SLLSETVRHKPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIG
                     IAAGSVLCAKFSRERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGW
                     AYPVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSA
                     VLLFLFDSISLLYLIVALGNIPLSVFLIKRERRFLGAAAIRKKP"
     gene            complement(5871..6056)
                     /gene="ccoS"
                     /locus_tag="WJJ54_001253"
     CDS             complement(5871..6056)
                     /gene="ccoS"
                     /locus_tag="WJJ54_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HEZ7342122.1"
                     /translation="MESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMD
                     DDSTSKLIEKERENDVR"
     gene            complement(6056..6355)
                     /locus_tag="WJJ54_001254"
     CDS             complement(6056..6355)
                     /locus_tag="WJJ54_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342123.1"
                     /translation="MHYFSIHDQWGRHIGFFILLADDESEARPQSGRFAVKLEGGMEN
                     HVLSPFGQTEIPQYWRVVKDRIELFFDEAPVGTLRNEYLTVSGQTFVLNDLTGNM"
     gene            6706..7902
                     /locus_tag="WJJ54_001255"
     CDS             6706..7902
                     /locus_tag="WJJ54_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEZ7342124.1"
                     /translation="MSQKLILVLNCGSSSLKGAVLDNGSGEVLLSCLAEKLNLPDAYI
                     TFKVNGEKHKVDLSAHPDHTGAVEALMEELKAHGLDSRIGAIGHRVVSGGELYSESIL
                     VDDEVIAGIEKCIPLAPLHNPAHLLGLRAAQSIFKGLPNVVVFDTSFHQTMPEVAYKY
                     AVPQELYEKYGLRRYGAHGTSYRFVADETARFLGKDKKDLRMVIAHLGNGASITAVAN
                     GESRDTSMGLTPLEGLVMGTRSGDIDPSVFGFLAENANMTIAQITEMLNKKSGLLGIS
                     GLSNDCRTIEEEAAKGHKGAKLALDMFIYRLAKYIGSMAVAAGGLDALVFTGGIGENS
                     DIIRERVIGYLGFLGLNIDQEANLKARFGNAGVITTAGSKAIAVVIPTNEELMIAHDT
                     ARLSGL"
BASE COUNT         1889 a         2413 c         1958 g         1761 t
ORIGIN      
        1 ataaatttac cacaaaaaag ctgcctcaaa tgaatacccg ggcagctttt tgttgatatg
       61 actccaatca gcggtgttgc ggattgtaac gtttttccaa acgcaggaat atccagccta
      121 agaaagtcgt catcaacaga taaatcaggg cgacggtgta aagcggttct tcataaaccg
      181 aataccggcc cgtaatcgta ttctgaacat acgccaactc cgccacagca atgaccgaca
      241 gcagcgagct gtctttcaag agcgtgatga actcgctcgc caaaggcggc agcatgcggc
      301 gcaatgcctg cggcagaatc acatagcgca tcgcctgcgg ataggtcagc cccaaagaac
      361 gcgccgcctc catctgtcct ttgtctatag actggatgcc cgcgcggaaa atctcacaga
      421 tatacgcccc cgagttggcg atcagtgcca aagaaccggc aatcagcggc ccgtatccgc
      481 gacgcagcgc gattgccgcc tcgccgctga ccaaaatgcc gtctgaagga tggacgaaaa
      541 acggaaacca cacatacgcc caaatcacaa tctgcacaaa cagcggcgta ccccggaaca
      601 gcgtaacata cagcagcgaa accttacgca acgcccacgc cagcacgcgc atcggcgcac
      661 cggctttttc caagtgaatc aggcgcgcca acgccaacaa cagacccaat accgaaccgc
      721 ccgccgtcgc cacgaccgtc agccccaagg tcgtcagtgc gccgtaaagg aacatccagc
      781 ggtattcgta aataatgtca aaacgaaaat ccatataccg tccgtatcaa aaaccggcgg
      841 aactgccgcc gttgcaaaat aatccgccat tttaccgtaa aaaccgccgc ctgaactttt
      901 ttatcgcggc agacggcggt tgcgcgtctc cgcaaaaatg cagggcgcgc ggttttcaga
      961 cggcatttgc cgttcaaagc cgtgcggtgt ctttaccaaa tgcccaacca ttcgcccacg
     1021 gcatccatcc aatccttatt gcccccgccg ctcctgcctg cccggcggta cgcccacggc
     1081 gcttgcggat ttttagcttt ccacaatcct ttgcgttccc tttccgcctg aatttgagcg
     1141 tcggcataat cggcaaaatc cgccttatcc tgctgttctt tagcataact tttataatgc
     1201 cacgccgccc cgtcctgcac ctgcatcagg ttcaaatcgg ttttgccgac agaaacctgc
     1261 gccacttcgc gctggtagcg gtcggtgtcg aacacgcgga cgctgacttt cctgccttcc
     1321 gccgccgcgc gcaggttgtc gcgcgaacgc gtgccgtaag cctgtttcat ctccggcgcg
     1381 tcgatatacg ccatccggat tttgtgtttc gcgccgtcgc cgtcgataac gtgaagggtg
     1441 tcgccgtcat agactttgga caccgtgcct gtgtagcggt ggccggattt cgccgatgct
     1501 cggcggcggg cgggcgcgtc ggaacccgcg tcccctgccg cgccgagtac gtcgagtacg
     1561 gcaaccgccg tccgcaccgc ctcgctgccg taccccgtat aacccaacgc acccaaaagc
     1621 gacaaggcga cgggaagcca tttcatgatt tttttaatct gcatattttt caaatgccga
     1681 tgccgtctga acatctctga accggatttc agacggcatc ttaacgtcag gattaccctt
     1741 ggcagggata gatgactttc gcaccctctt ccgtccccaa aatcaacaca tcggcggcat
     1801 cgcgggcgaa tatgccgttt tcgagcacgc cggtgatttt gttgatttcg tcttccatcg
     1861 tcagcggctg atcgatattc aagccgtgga catcgacgat ttggttgccg taaaacgtgg
     1921 tgtagccgat acgcagttcg ggctgtccgc ccatagcgag cagtttgcgc gaaacaaggg
     1981 aacgcgcgct ttcgacgact tccacgggca gagggaattt gcccaaacgt gaaacatatt
     2041 tgctttcatc cgcaatgcag atgaattttt ctgatgcgct ggcgacgatt ttttcgttga
     2101 ggtgcgcgcc gccgccgccc ttaatcattt gcagggcgtg gttcacttca tccgcaccgt
     2161 cgatatagac cgccaaaccc gatacttcgt tcagggaaac gacgggaatg tcgtactggg
     2221 caagcagttc gctggatttt ttggaggttg aaacagcgcc tttgattttt ttgccgctct
     2281 tacccaaggc ttcgatgaaa aagttgatgg tcgagccggt accgatgccg atgtattcgt
     2341 tttcgggtac gaattcgact gctttttcgg cggcgatgcg cttgagttcg tcttgtgtcg
     2401 tcatattttt gtcctttggg aaaccgtatc aacaaacagc cgccatctta acattttttt
     2461 gcacgtcctg cccgccgcgt tcaaatccgt accagcaata ccgccgcctg cgcctctatg
     2521 ccttccatgc gcccgagata accgagtttt tcgttggttt tgcctttgat gttgacgcac
     2581 gaaatgtcta tgcccaaatc ggcggcgatg ttggcacgca tttgcggaat atgcggcgcg
     2641 agtttgggtt tctgtgcaat cacggtcgta tcgacattga ccgcctgcca accctgcgcc
     2701 tgaacgcttt gatacgccgc acgcaaaagg acgcggctgt ccgcatcttt gaactctgcg
     2761 gcggtgtcgg ggaaatggct gccgatatcg cccaaacctg ccgcaccgag cagcgcgtcg
     2821 gtaacggcgt gcagcagcgc atcggcatcg gagtgtccga gcagcccttt ttcaaatggg
     2881 atttcaactc cgccaagtat cagctttctg ccttcggtca gttggtggac atcgtagccc
     2941 tgtccgatac ggatgttcgt catcgtttgt gttcctgatg ttttgaattg aagttcagac
     3001 ggcatcgagc agcagcctga cgatgtatgc gtcctgcggc tgcgtcagtt tcaaattgcg
     3061 cgcgtcgccc tgcaccagca aagggtggat gcccaatttt tcgacggcgg acgcttcatc
     3121 ggtaatgccg tccaagtttt ccgcagccaa tgcgcggtgc agcagcccgg cgcggaaaag
     3181 ctgcggcgtt tgtgcctgcc aaaggctcgt ccgctcgacg gttgcactaa tgttcccacc
     3241 gtccgcgcgc ttgagcgtat cggcaacggg aattgccaaa atcccacctt cggcagcgtt
     3301 gcccgcctgt tctatcaacc gcgtcaaagc ttcagacggc aggcagcaac gcgcggcatc
     3361 gtgtaccaga atattgtcgg tttccgccgc caaaccggtt tccaacaatt ttgccacacc
     3421 gtttcggacg gtttcggcgc gggtctgtcc gccgtttttc cacacccgaa cctgtggaaa
     3481 tgccgtctga accttatcgg caaacgtgtc ttcgggcgag acgacaacga cggtcaaatc
     3541 gacgccctca tgccgttcaa aaatcccaag cgtatgttct aaaacggttt tgcttccgat
     3601 ttcgacatat tgcttgggtt tgtccgcacc gaaacgcgcc ccgatgccgg cggcgggaat
     3661 cagcgcgata tttttgcgct tcatgcgtcc gtcccgccgt tttcagacgg cacggcttcc
     3721 ttgcgccaga tacaggcttc gcccaagccg tccaaatatt gcccgtgttc cgccaactcg
     3781 ttttcgtccg ccctgatgac tttcagtttg ccgctgcgtt tggtttcggt atgcaccacg
     3841 ggtttggttt ccattttttc ctctgcggcc gcacccatca ggtcgaactg ccgccgcgtc
     3901 atagcaagat agacttcgcc caaaagttcg cagtcgatca atgcgccgtg caggacgcgc
     3961 ttgctgcggt cgacggaaaa acggttgcac aaggcatcca ggctggcttt ctgcccgggg
     4021 aacatttcgc gcgccatcgc cagggtatcg gtaacggtac agccgagttc ctcaacggtc
     4081 ggcaacccca tccggcggaa ctccatattg aggaagccca cgtcgaattt ggcattatgg
     4141 ataatcagtt ccgcaccgcg cagaaaatcg gcaatctgcc tgccgacctc tgcaaacggc
     4201 ggcgcgtttt tcccttccaa aacctctatc gtcagaccgt gcaccctcgc cgcctcttcg
     4261 ggcatatcgc gctcggggtg gacatagagg tgcaggtttt tgtcggtcat ttggcggttg
     4321 accatttcta aaccggcaaa ctcgaccaag cggtcgccgc cgtcggcata cagaccggtg
     4381 gtttcggtat cgaggatgat ttggcgtgtc gtcatatcgg tgtctttctt ctatcttcgt
     4441 aaattgctta ttttttaagc aatgtatttt tctgttttca tttcaatgca caaacccact
     4501 tattcacagt gtgttcacaa cattgggcag gcggattgtg tattttgggg acaatttttt
     4561 cagacggcat tcaaggtttt ttcctgattg ccgccgcgcc taaaaaccgc ctttcgcgct
     4621 taatcaaaaa taccgacaac ggaatattgc ccaaagcgac aatcagatac aacaaggaaa
     4681 tgctgtcaaa caaaaacagc aacaccgcgc tcaaaacggc ggcggaaacc ataaaaatac
     4741 cgttaacgat attgttggcg gcaacggcgc gggcgcggaa agtctcgcta ctggcggttt
     4801 gcagccaagt atagagcgga acggagaaaa atccgccgaa aaagccgatc agcgtcatca
     4861 ccgccatcac gggatatgcc catccttgcg ataaaaacca aaaaatgccg ttcagccctt
     4921 caaaacggtg tccgtgcgtc agccacacca aaaccaggcc gcaaaccgtc aaacccaacg
     4981 caccaaccgt tacccaagcc aacatcagcc gttccctgct gaacttggca cacagtaccg
     5041 aaccggcggc aataccgatg gaaaacaggg caagcatcag gttgaaaaca ttgtcgttgc
     5101 cgcccagatg gatttgggta aaggtcggca gttgcgtggt ataaaccgcg ccgacaaacc
     5161 aaaaccacga aataccgata atggcggtaa aaacgggctt gtgccgcacc gtttcactca
     5221 gcagggattt tgtgccacgg acaatattcc actcaatttg tgtatcggca gccttggcgg
     5281 gtacagacgg cataaacagg ctgccgaccg tgcctccgac ggcgaccagc aaaaccagta
     5341 tcccgacaat ataaggcggt acacctgcca ccgccgttcc caaaatctga ccgaacagga
     5401 tggcgacaaa cgtacccgat tcaatcaggc tgttgcccat catcaactct ttgtcgtcga
     5461 gataatcggg caggatggcg tatttcagcg gcccgaacag cgtcgattgc gcgcccatgc
     5521 aaaacagaca cgccaaaagc agcggggcag accggatata aaacccgtat gccgccaccg
     5581 ccataatgat catttccagc accttgaccc aacgcgccaa aacggccttg tcgaatttgt
     5641 tacccaactg ccccgacagc gaggaaaaca ggaaatacgg caaaataaac agcaacgcgc
     5701 ccaagttcaa catctgtccg gcaggcagga agccgttttg ccccaaaccg taaaacccaa
     5761 tcatcacaaa cagcgcggtt ttgaacacat tgtcgttgaa cgcgccgaga aactgcgtag
     5821 cgaaaagagg tgcgaaacgg cggcttttaa ccagtcccaa accgcctttt ttagcgtaca
     5881 tcgttttccc tctctttttc aatcagttta cttgtcgaat catcatccat caggatgcgg
     5941 tgcgccggcc cttccaagtc gtcaaactgc ccgtttttgc ccgaccacca aaaaaaccag
     6001 ccgatgacaa acgccaaaat aatgctgatg ggcaccaata taaacatgct ttccatcaca
     6061 tattccctgt caaatcgttc aaaacaaaag tctgccccga cacggtcaga tattcgttac
     6121 gcaaagttcc gacaggtgct tcgtcaaaaa acagctcgat acggtctttg accacgcgcc
     6181 aatattgggg gatttccgtc tgaccgaacg gcgacaggac atgattttcc attccgcctt
     6241 caagtttgac ggcaaaacgc ccgctttgcg gccgcgcctc tgactcgtcg tcggcaagca
     6301 ggatgaaaaa gcctatatgc cgtccccatt ggtcatgaat actgaaataa tgcataaatt
     6361 tcccacccgc cttttttcag acgacaccaa ctaaaaacag ggcgaatgta ccagtttgga
     6421 cgggaagaat gcaaagaaat tctccctccc ccagccgaaa acaccggcaa accgcatatc
     6481 cccctttttt ccgtcaaaat gcccgacttc cgccattttc acgcaaacgc ccgattaagc
     6541 caagcaattg caaagatttt ttgctagaat agcctgcttc ttttatcaac cttttcagac
     6601 ggccccacta ctttcccgcc caggaaggca aaacggattc ggcacgaatc cggttagtat
     6661 ccgtgtccga ttccaatgcc gtctgaaact ttccggagta agaaaatgtc ccaaaaattg
     6721 atcttggttt tgaactgcgg cagctcgtcc ctcaaaggcg cggtcctgga taacggcagc
     6781 ggcgaagtcc tgctcagctg ccttgccgaa aaactcaacc tgcccgatgc ctacatcaca
     6841 ttcaaagtaa acggcgaaaa acacaaagtc gatctgtccg cacatcccga ccacaccggc
     6901 gcggtcgaag ccctgatgga agaactcaaa gcccacggcc tcgacagccg catcggcgcc
     6961 atcggccacc gcgtcgtcag cggcggcgaa ctgtacagcg aatccatcct cgttgacgac
     7021 gaagtcattg ccggcatcga aaaatgcatc ccgctcgccc ccctgcacaa ccccgcccac
     7081 ctcttgggcc tgcgtgccgc gcaaagcatt ttcaaaggcc tgcccaacgt cgtcgtattc
     7141 gatacctcct tccaccaaac catgcccgaa gtcgcctaca aatacgccgt tccgcaggag
     7201 ttgtatgaaa aatacggcct gcgccgttac ggcgcgcacg gtaccagcta ccgcttcgtc
     7261 gccgacgaaa ccgcgcgctt cctcggcaaa gacaaaaaag acctgcgtat ggtcattgcc
     7321 cacttgggca acggcgcgtc catcaccgcc gtcgccaacg gcgaatcgcg cgacaccagt
     7381 atgggcctga ccccgctgga agggctggta atgggtacgc gcagcggcga catcgatcct
     7441 tccgtattcg gcttcctcgc cgaaaacgcc aatatgacca tcgcccaaat cactgaaatg
     7501 ctgaataaaa aatccggtct gctcggcatt tccggcctgt ccaacgactg ccgcaccatt
     7561 gaagaagaag ccgccaaggg gcataaaggc gcgaaattgg ccttggatat gtttatctac
     7621 cgccttgcca aatacatcgg cagtatggcg gttgccgcag gcggtttgga cgcactggtc
     7681 tttaccggcg gcatcggcga aaactccgac atcatccgcg aacgcgtgat cggctacttg
     7741 ggcttcctcg gtctgaacat cgaccaagaa gccaacctga aggcacgctt tggcaacgcc
     7801 ggcgtgatta ccactgccgg cagcaaagcc attgccgtgg tcattccgac caacgaggaa
     7861 ttgatgattg cacacgatac cgcccgcttg agcggtctgt aagattcaat ccccacgcga
     7921 actgcctccg aaaacggagg cagttttttt atccggcttt ccatgcttaa acagcaccgc
     7981 ctcttttcag acgttgacgg ttgcagccgc ttacctgaac c
//
LOCUS       DAWKJW010000084         7976 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.084, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000084 DAWKJW010000000
VERSION     DAWKJW010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7976)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7976)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7976
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.084"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(220..2910)
                     /gene="glnE"
                     /locus_tag="WJJ54_001256"
     CDS             complement(220..2910)
                     /gene="glnE"
                     /locus_tag="WJJ54_001256"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HEZ7342125.1"
                     /translation="MSDNRLDTARHHSLFLARQLDNGKLKPEIFLPMLDKVLTEADFQ
                     AFADWDKIRAEENEEELARQLRELRRYVVSQIIVRDINRISDLNEVTRTITLFADFAV
                     NTALDFAYAYYRDMYGTPIGRYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFVYPESG
                     DTDGRRERGNQEFFTKVGQKLIALLNDITADGQVFRVDMRLRPDGDSGALVLSETALE
                     QYLITQGREWERYAWCKGRVVTPYPNDIKALVRPFVFRKYLDYGAYEAMRKLHRQIRS
                     EVSKKGMADNIKLGAGGIREIEFIAQIFQMIRGGQMRALQLKGTQETLKKLAETGIMP
                     SENVETLLAAYRFLRDVEHRLQYWDDQQTQTLPTSPEQRQLLAESMGFDSYAAFSDDL
                     NVHRNKVNQLFNEILSEPEEQTQSNSEWQWTWQEKPDEEERLGRLKEYGFDAETIATR
                     LDQIRNGHKYRHLSAHAQPRFDAIVPLFVQAAAEQNNPTDTLMRLLDFLENISRRSAY
                     LAFLNEHPQTLAQLAQIMGQSSWVAAYLNKYPILLDELISAQLLDTAFDWQALAAALS
                     DDLKACGGDTEAQMDTLRRFQHAQVFRLAVQDLAGLWTVESLSDQLSALADTILAAAL
                     LCAWADMPKKHRDTPQFAVVGYGKLGGKELGYASDLDLVYLYDDPHPDAGDVYSRLAR
                     RLTNWLSAATGAGSLYETDLRLRPNGDAGFLAHSIAAFEKYQRENAWTWEHQSLTRAR
                     FICGTPEIQTAFDRIRTEILTAERDQTALSGEIIEMREKMFPTHPPADSNVKYARGGV
                     VDVEFIVQYLILAHARQYPQLLDNYGNIALLNISADCGLIDKTLAGQSRTAYRFYRRQ
                     QHNTKLRDAAKTEVSDELLSHYGNVRKLWREVFGEEAATA"
     gene            complement(3108..3443)
                     /locus_tag="WJJ54_001257"
     CDS             complement(3108..3443)
                     /locus_tag="WJJ54_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342126.1"
                     /translation="MPSEALSGLQTAFCFPTVYKLSLFLDRNNDLIYLKRLEDMIMGF
                     WNGVAKAAKAVGEGMIEAGNEHKALKMEYAEKSSEELHEIVKSDGFFKNSTREKSAAY
                     AILKERGEV"
     gene            complement(3457..3930)
                     /locus_tag="WJJ54_001258"
     CDS             complement(3457..3930)
                     /locus_tag="WJJ54_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2247 family protein"
                     /protein_id="HEZ7342127.1"
                     /translation="MDLDLTAQKVRLSWKDILWGYGNKYLGWADVAAYARKMTLSDHD
                     ERVFKLSLINKSNILELKPVLEDLASEMRDYSPKNWLYVLLSDVFHRKEEFEDPLGEV
                     EKIYADFDYPEEIESFVRYMPPKDGYIPSAHTYEENIARLYSHWEHYLNNGGGQG"
     gene            complement(3983..4264)
                     /locus_tag="WJJ54_001259"
     CDS             complement(3983..4264)
                     /locus_tag="WJJ54_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342128.1"
                     /translation="MENGQRNNRFPLEKRIFYLEHSGRYLMICALSDYSQNKHTVVMA
                     NFIYPDEKTDWRNLDDLFNELVLEELQASFMDWHPTVEEAISRHLEDFS"
     gene            complement(4351..4674)
                     /locus_tag="WJJ54_001260"
     CDS             complement(4351..4674)
                     /locus_tag="WJJ54_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342129.1"
                     /translation="MFKDELNEFIRLISDPESELDEWYLSDFKDEHIWEMQSYEAFSC
                     LREAVPYLFAYPRYGYELLEIISALKETSDTTELFYEPGIVPLLIDLYKEDSYLVNMV
                     KRIFK"
     gene            complement(5007..6014)
                     /locus_tag="WJJ54_001261"
     CDS             complement(5007..6014)
                     /locus_tag="WJJ54_001261"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEZ7342130.1"
                     /translation="MYPLARRILFALDAEKAHHFTLDALNMVYKLGLIPVTGNRTKPV
                     KLMGLDLPNPVGLAAGLDKNGEYIDALGALGFGFIEIGTVTPNPQPGNPQPRLFRVPE
                     YQGIINRMGFNNHGIDAMIQNIEKSKFSGVLGINIGKNAVTPIENAADDYLICLEKAY
                     AHASYITVNISSPNTKNLRALQGGDELSALLEALKNKQAQLASVHGKYVPLAVKIAPD
                     LDEAQIEDIAHVVKSVEMDGIIATNTTIDKSSLGSHPLAGEQGGLSGLPVHEKSNRVL
                     KLLADHIDGKLPIIGVGGIMEGGDAAEKIRLGATAVQVYSGLIYKGPALVKECLKALA
                     R"
     gene            6246..6482
                     /gene="acpP"
                     /locus_tag="WJJ54_001262"
     CDS             6246..6482
                     /gene="acpP"
                     /locus_tag="WJJ54_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEZ7342131.1"
                     /translation="MSNIEQQVKKIVAEQLGVNEADVKNESSFQDDLGADSLDTVELV
                     MALEEAFGCEIPDEDAEKITTVQLAIDYINAHNG"
     gene            6638..7885
                     /gene="fabF"
                     /locus_tag="WJJ54_001263"
     CDS             6638..7885
                     /gene="fabF"
                     /locus_tag="WJJ54_001263"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEZ7342132.1"
                     /translation="MSQRRVVITGLGQVSPVGNTVAEAWDTLLAGKSGIGAITRFDAS
                     DINSRVAGEVRGFDIGQYISAKEARRMDVFIHYGIAAALQAIADSGLDDVENLDKDRI
                     GVNIGSGIGGLPSIEVTGKAVIEGGARKINPFFIPGSLINLISGHVTILKGYRGPSYG
                     MVSACTTGAHAIGNSARLIKYGDADIMVAGGAEGAISTLGVGGFAAMKALSTRNDDPA
                     TASRPWDKGRDGFVIGEGAGVLVLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNE
                     EGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDANETKALKRAFGEHAYKTVVSST
                     KSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQDVEAGCDLDYCANEARDAEID
                     VAISNSFGFGGTNGTLVFKRFKG"
BASE COUNT         1849 a         2108 c         2053 g         1966 t
ORIGIN      
        1 tcttatttgt ttgttttgat ttttgcttgg ataaaaaatc ccatcattcc cacaaaaaca
       61 gaagcctgaa atcccgtcat tcccgcgaaa gaggaatccg gtttttgggt ttcagccatt
      121 cccgataaat cgctttagct ctgccgcaac cttaaaacgg cacggtacga aaataccgtc
      181 tgaaacccag attgtcaggc ttcagacggc attttttgtt caggcggttg ccgcttcttc
      241 gccgaacact tcccgccaca atttcctgac attgccgtaa tgggacagta attcgtcgct
      301 tacttcggtt tttgccgcgt cgcgcagttt ggtgttgtgc tgctgccggc ggtagaagcg
      361 ataggcggtg cggctttgtc cggcgagggt tttgtcaatc aaaccgcagt cggcggagat
      421 gtttaagagg gcgatgttgc cgtagttgtc caagagttgc ggatactggc gggcatgggc
      481 aagtatcaga tattggacga taaattcgac atcgaccacg ccgccgcgtg cgtatttgac
      541 gttgctgtcg gcaggcgggt gggtggggaa cattttttcg cgcatttcga tgatttcgcc
      601 tgacaaggcg gtttggtcgc gttcggcggt gaggatttcg gtgcggatgc ggtcgaaggc
      661 cgtctgaatt tcgggtgtgc cgcagatgaa gcgggcgcgg gtaagggatt ggtgttccca
      721 cgtccaggcg ttttcgcgct ggtatttttc aaaggcggcg atgctgtggg cgaggaaacc
      781 ggcgtcgcca ttagggcgca ggcgcaggtc ggtttcgtag aggctgcctg cgccggtggc
      841 ggcggaaagc cagttggtca ggcggcgggc gaggcggctg tacacgtcgc ctgcgtcggg
      901 gtgggggtcg tcgtagaggt agacgaggtc gaggtcggag gcgtagccga gttctttacc
      961 gccgagtttg ccgtagccga cgacggcgaa ttgcggtgtg tcgcggtgtt ttttgggcat
     1021 gtccgcccat gcgcacagca gggcggcggc gaggatggtg tcggcgaggg cggagagttg
     1081 gtcggagagg gattctaccg tccacagtcc ggcgaggtct tggacggcga gacggaagac
     1141 ttgggcgtgc tggaagcggc gcagggtgtc catttgcgct tcagtatcgc cgccgcaggc
     1201 tttgaggtcg tctgaaaggg cggcggcgag cgcctgccaa tcaaacgcgg tatccaaaag
     1261 ctgcgcgctg atgagttcgt ccaacaaaat cggatatttg ttcagatacg ccgccaccca
     1321 agaactttgg cccataatct gcgccagttg cgccaaggtt tgcggatgtt cgttgaggaa
     1381 ggcgagatag gcggatcggc ggctgatgtt ttcgagaaaa tccaacagcc gcatcaatgt
     1441 atcggtcggg ttgttttgct ctgccgccgc ttgtacgaac aacggcacaa tggcgtcaaa
     1501 acgcggctgg gcgtgggcgg aaaggtggcg gtatttatgg ccgttgcgga tttggtcgag
     1561 ccgcgtggcg atggtttcgg catcaaaccc atattctttc agacggccta gccgttcttc
     1621 ttcatcaggc ttttcctgcc atgtccattg ccattcgctg ttgctttgcg tttgttcttc
     1681 gggttcgctc agaatttcgt tgaacaactg attgaccttg ttccgatgaa cattgagatc
     1741 gtctgaaaag gcggcgtagc tgtcgaaacc catgctttca gcgagcagtt gccgctgttc
     1801 aggcgaagtg ggcagggttt gggtttgttg gtcgtcccag tattgcaggc ggtgttcgac
     1861 gtcgcgcagg aagcggtagg cggcaagcag ggtttcgacg ttttcagacg gcatgatccc
     1921 ggtttcggca agtttcttca gcgtttcctg cgtgcctttc aattgcagcg cacgcatttg
     1981 gccgccgcgt atcatctgga aaatctgggc gataaattcg atttcgcgga tgccgcccgc
     2041 gccgagcttg atgttgtccg ccatgccttt tttgctgact tcgctgcgga tttggcggtg
     2101 cagcttacgc atcgcctcat acgcgccgta atccagatat ttgcggaaca caaaggggcg
     2161 caccagtgct ttgatgtcgt tcggatacgg cgtaaccacg cgacctttgc accacgcgta
     2221 gcgttcccat tctcgcccct gtgtaatcaa atattgctcc agcgcggttt cgctcaatac
     2281 caacgcgccc gaatcgccgt ccggccgcag ccgcatatcg acgcggaaca cctgcccatc
     2341 ggcggtaatg tcgttcagca gcgcaatcag tttctgcccg actttggtga aaaattcctg
     2401 attgccccgt tcgcgcctgc cgtcggtgtc gcctgattcg ggatagacga aaatcaaatc
     2461 gatgtcggaa gacacgttca actcatagcc gcccgccttg cccatcgcca ccacgcttaa
     2521 atgctgcggc gatttggtat aacgcccgat tggcgtgccg tacatgtccc gataataggc
     2581 gtaggcgaaa tccagcgcgg tattgacggc aaaatcggca aacagcgtaa tcgtgcgggt
     2641 tacttcgttc aaatcgctga tgcgatttat atcgcgcacg ataatctgcg acacgacata
     2701 acggcgcaac tcgcgcaact gccgcgccaa ttcttcctcg ttttcttccg cgcggatttt
     2761 gtcccaatca gcaaaagctt ggaaatcagc ttcggtcaac accttgtcca acatgggcag
     2821 gaaaatttcg ggcttgagtt tgccgttgtc gagctggcgg gcaaggaaca gggaatggtg
     2881 ccgggcggtg tcgaggcggt tgtcggacat ttcggattcc gtttgaaaaa atggcaggaa
     2941 gatgatggcg gattcacttc aaatcaggac agggcgaggg gatgccgtac cggtttaaag
     3001 tcaagccact atatcatagc aaccttcgat gccgtctgaa accttgcccc gacatccaga
     3061 cggatgcctg ccgataaaaa acagcggcaa atgccgccgt ttcctgttca cacctcgcca
     3121 cgctctttta aaatagcata agccgcactt ttctcccgtg tggaattttt aaaaaaacca
     3181 tcactcttga cgatttcatg cagctcctca cttgatttct ccgcatattc cattttcaac
     3241 gccttatgct cattgccggc ttcaatcatt ccctctccca ctgcttttgc tgcttttgcc
     3301 acaccattcc aaaaacccat aatcatgtcc tccaatcgtt tcaaataaat aaggtcgttg
     3361 tttctgtcaa gaaacaacga cagtttataa actgtcggaa aacaaaatgc cgtctgaagg
     3421 ccggataatg cttcagacgg catcggattg ccggttttaa ccctgccctc cgccgttgtt
     3481 caaatagtgt tcccagtgag aatataaccg ggcaatattt tcttcatagg tgtgggcaga
     3541 aggaatataa ccgtctttgg gcggcatata cctgacaaat gattctattt cttccggata
     3601 atcaaaatct gcataaattt tttcaacttc ccccaaagga tcctcaaatt cttcttttct
     3661 atggaataca tcgcttaaga ggacgtacag ccaattttta ggggaataat ccctcatttc
     3721 cgaagccaaa tcttccagaa caggctttaa ttcaagaata ttggatttgt tgattaaaga
     3781 tagtttgaac acacgttcat catgatctga aagcgtcatt tttcgggcat aagctgccac
     3841 atcagcccaa cccaagtatt tattcccata cccccacaga atatccttcc aagaaagacg
     3901 gactttttgc gcggttaaat caaggtccat tttttactcc gattgcctgc cccgtcattc
     3961 cgccccttcc gattgacgcc tgttacgaaa agtcttccaa atgacggctg attgcctctt
     4021 caacagtcgg atgccaatcc ataaatgaag cctgcaattc ctctaaaacc aactcattga
     4081 ataaatcatc caaattccgc caatccgttt tttcatccgg atagatgaaa tttgccataa
     4141 cgacagtatg tttgttttgg gaataatccg ataaggcgca aatcatcaga taccgccccg
     4201 aatgctccag ataaaaaatt cgtttttcca aaggaaaccg gttattccgt tgcccgtttt
     4261 ccatttttca tcctttttaa cgtatcggct tccgcgtcct tcaaattgag ttacctgcct
     4321 tccgccaagc aaacgcccgc gcccctttca tcatttgaat atccgtttga ccatatttac
     4381 cagataacta tcttctttat ataaatcaat cagcaaaggc acgatacccg gctcataaaa
     4441 taattctgtc gtatcagatg tttcttttaa cgcggaaatt atctccaaca gttcataccc
     4501 gtatcgggga taagcaaaca aataggggac tgcttcccgc aaacatgaaa atgcttcgta
     4561 actttgcatt tcccatatat gttcatcttt aaaatcactc aaataccatt catccaattc
     4621 actttccgga tcggatatca atcggataaa ttcatttagt tcgtccttaa acatatcaaa
     4681 tccttaaata taaaatcttt tgattatccg ccgtatcctt attttccaca tcatgaattt
     4741 caacgccgtt catattttgc gttttcccaa gccgtccgcc acagtataaa attatttttt
     4801 gtatcaattg cttatatatt taacaactta ccgccggact tgctttggct gcgtatcaag
     4861 attgtccggt tcgcggcggg cgtttgcttt gtttcaaaca gggcggcgcg taagggattt
     4921 tcaaggggcg tcaggcggaa aaaggaaatg aaaatgccgt ctgaacggca aaacgtgcgt
     4981 tcagacggca ttttgggcgg atcgcgtcat cgcgccaaag ccttcaaaca ttctttgacc
     5041 aatgccggac ctttgtatat caatccgctg tacacctgga cggcggtcgc gcccaagcgg
     5101 attttctctg ccgcgtcccc gccttccata atgccgccta cgccgataat cggcagcttg
     5161 ccgtcgatgt ggtctgccaa cagcttcaac acccgattac ttttttcatg aacgggcagc
     5221 ccgctcaaac cgccctgctc gcctgcgagc ggatggctgc cgagacttga tttgtcgatg
     5281 gtggtgttgg tagcaatgat gccgtccatt tcgacggatt tgacaacgtg ggcgatgtct
     5341 tcgatttgtg cttcatccaa atcgggggcg attttgacgg cgagcgggac gtatttcccg
     5401 tgtacagagg caagctgtgc ctgtttgttt ttcaaagcct caagcaatgc gctcaactcg
     5461 tcgccacctt gcagcgcgcg gaggttttta gtgttgggcg aggaaatatt gacggtaatg
     5521 taacttgcgt gtgcgtaggc tttttcgagg cagattaaat aatcatcggc agcgttttca
     5581 atcggtgtta cagcgttttt gccgatgttg atgcccaata cgccgctgaa tttacttttt
     5641 tcgatgtttt gaatcatggc atcgatgccg tggttgttga agcccatgcg gttgatgatg
     5701 ccttgatatt cgggaacgcg gaagaggcgc ggctgcgggt tgccgggctg cgggttgggc
     5761 gttaccgtgc cgatttcgat aaaaccgaag ccgagcgcgc ccaatgcgtc tatatattcg
     5821 ccgtttttgt cgagtccggc ggcaagcccg acagggttgg gcaaatccaa acccatcagt
     5881 tttacaggtt tggtacggtt gccggttacg ggaatcagac ccaatttata aaccatgttg
     5941 agcgcgtcga gcgtgaagtg gtgggctttc tcggcatcga gtgcaaacag gatgcggcgg
     6001 gcaagtggat acatgacagg gctttctgct tcagatggaa atgccgtcat tttaaccgaa
     6061 atcccgtcaa acatacggca cacaggtcaa acttgaacga caaaacccgc cgcacccaaa
     6121 aatgtacaaa tcggcaaata ttgatataat agtcattaga tagaaaactc tattaaaagt
     6181 cggtacaata ccaccgattt atttccctta aacaacctgc cgcaaggcat aaaggaacga
     6241 ctgatatgtc aaacatcgaa caacaagtta aaaaaattgt tgctgaacaa ctgggcgtaa
     6301 acgaagccga cgtgaaaaac gaatcttctt tccaagacga cttgggcgcg gattctttgg
     6361 acaccgtgga gctggttatg gctttggaag aagcattcgg ctgcgaaatc cccgacgaag
     6421 atgccgaaaa aatcaccacc gtccaactgg ctatcgacta catcaatgcc cacaacggct
     6481 aaccggtcgt cgcccgacac aacagcctct gctgcaccgc gcaatagagg cttttccctt
     6541 atatggcaaa ctgtttgaac ccctgccgca aattacagac ggcatctgca cgacagccgc
     6601 atatgccccc attccgacaa ccaacagcga ggttatcatg agtcagagaa gagtagtcat
     6661 tacaggctta ggtcaggttt cccctgtcgg caacactgtc gcagaggctt gggacaccct
     6721 gctcgccggc aaaagcggca tcggcgcgat tacccgcttt gacgcatccg acatcaacag
     6781 ccgtgtcgcc ggcgaggtgc gcggtttcga catcggacaa tacatcagcg cgaaagaagc
     6841 gcgccggatg gacgtattca tccactacgg cattgccgcc gcattgcagg caatcgccga
     6901 ttcgggcttg gacgatgtgg aaaacctcga caaagaccgc atcggcgtga acatcggttc
     6961 cggcatcggc ggactgccca gcatcgaggt caccggcaaa gccgtaatcg aaggcggcgc
     7021 gcgcaaaatc aaccctttct ttatccccgg ttcgctgatc aacctgattt ccggacacgt
     7081 taccatcctc aaaggctacc gcggcccgag ctacgggatg gtttccgcct gtaccaccgg
     7141 cgcgcacgcc atcggcaatt ccgcccgact gatcaaatac ggcgacgcgg acataatggt
     7201 tgccggcggc gcggaaggcg caatcagcac tttgggcgtg ggcggttttg ccgcgatgaa
     7261 agccctctcc acccgcaacg acgatcccgc caccgcttcc cgtccgtggg acaaaggccg
     7321 cgacggcttc gttatcggcg aaggcgcggg cgtattggtg ttggaagaat tggaacacgc
     7381 caaaaaacgc ggtgcgaaaa tttacgccga aatcgtcggc ttcggcatga gttccgatgc
     7441 ttaccatatc accgcgccga acgaagaagg ccccgccctt gccgttaccc gcgcgctgaa
     7501 agatgccggc atcaatcccg aagacgtgga ttacgtcaac gcgcacggca cgtccacccc
     7561 cttgggcgat gccaacgaaa ccaaagccct caaacgcgcg ttcggcgaac acgcctacaa
     7621 aaccgtcgtc agctcgacca aatccatgac cggccacctg ctcggcgcgg cgggcggcgt
     7681 ggaggccgtg tacagcattt tggcgataca cgacggcaaa atcccgccga ccatcaacat
     7741 ttttgaacaa gacgttgaag ccggctgcga tttggactac tgcgccaacg aagcgcgcga
     7801 cgcggaaatc gacgttgcca tttccaactc cttcggcttc ggcggcacca acggcacgct
     7861 ggtcttcaaa cgcttcaaag gctgattccg caaagccgcc gccgacatcg aaatgccgtc
     7921 tgaaaccgtt tcagacggca tttttatagt gattaacaaa aatcaggaca aggcgg
//
LOCUS       DAWKJW010000085         7886 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.085, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000085 DAWKJW010000000
VERSION     DAWKJW010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7886
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.085"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            108..1277
                     /gene="prpF"
                     /locus_tag="WJJ54_001264"
     CDS             108..1277
                     /gene="prpF"
                     /locus_tag="WJJ54_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
                     /protein_id="HEZ7342133.1"
                     /translation="MPQIKIPAVYYRGGTSKGVFFKRSDLPEAAREAGSARDKILLRV
                     LGSPDPYGKQIDGLGNASSSTSKAVILDKSERADHDVDYLFGQVSIDKPFVDWSGNCG
                     NLTAAVGAFAIEQGLVDKGKIPSDGICTVKIWQKNIGKTIIAHVPMQNGAVLETGDFE
                     LDGVTFPAAEVQIEFLDPADGEGSMFPTGNLVDEIDVPNIGRLKATLINAGIPTVFLN
                     AADLGYTGKELQDDINNDAAALEKFEKIRAYGALKMGLISDVSEAAARAHTPKVAFVA
                     PAADYTASSGKTVNAADIDLLVRALSMGKLHHAMMGTASVAIATAAAVPGTLVNLAAG
                     GGTRKEVRFGHPSGTLRVGAAAECQDGQWTATKAVMSRSARVMMEGWVRVPEDCF"
     gene            1691..2890
                     /locus_tag="WJJ54_001265"
     CDS             1691..2890
                     /locus_tag="WJJ54_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEZ7342134.1"
                     /translation="MSDQLILVLNCGSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVI
                     TFNKDGNKRQVPLSGRNCHAGAVGMLLNELEKHGLHDRIKAIGHRIAHGGEKYSESVL
                     IDQAVMDELNACIPLAPLHNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTY
                     AVPRELRKKYAFRRYGFHGTSMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAIKN
                     GKSVDTSMGFTPIEGLVMGTRCGDIDPGVYSYLTSHAGMDVAQVDEMLNKKSGLLGIS
                     ELSNDCRTLEIAADEGHEGARLALEVMTYRLAKYIASMAVACGGVDALVFTGGIGENS
                     RNIRAKTVSYLDFLGLHIDTKANMDKRYGNSGIISPTDSSPAVLVVPTNEELMIACDT
                     AELAGIL"
     gene            2997..3617
                     /locus_tag="WJJ54_001266"
     CDS             2997..3617
                     /locus_tag="WJJ54_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HEZ7342135.1"
                     /translation="MAQFFAIHPDNPQERLIKQAVEIVNQGGVVVYPTDSCYALGCKL
                     GDKAAMERILSIRKIDLKHHLTLMCADLSELGTYAKIDNVQFRQLKAATPGPYTFILQ
                     ATKEVPARTLHPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEI
                     RERLEHAVDLVIDGGWCGTEPTTVVDMTDGTELVRRGCGDTAVFGL"
     gene            complement(3744..4187)
                     /locus_tag="WJJ54_001267"
     CDS             complement(3744..4187)
                     /locus_tag="WJJ54_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEZ7342136.1"
                     /translation="MYLTQHTDYGLRVLIYTAINDDALVNISTIAVTYGISKSHLMKV
                     VTALVKGGFLHSVRGKGGGLRLAAPPDRINIGSVVRHLEPMQLVECMGENNECLITPS
                     CRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYEPRIPIAVQ"
     gene            4361..4729
                     /locus_tag="WJJ54_001268"
     CDS             4361..4729
                     /locus_tag="WJJ54_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ7342137.1"
                     /translation="MKPLKRHPALIGLSRDHHHSLSLCVRLLRTPEERHRDELEPHFA
                     ELETHFREEEAKFAPIWQNVAPELKQRFEKDHARLRQMMASPEYGNAAWNTAFATTLR
                     DHARFEERELFPAAEPFLPA"
     gene            4774..5928
                     /locus_tag="WJJ54_001269"
     CDS             4774..5928
                     /locus_tag="WJJ54_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEZ7342138.1"
                     /translation="MKFTKHPVWAMAFRPFYSLAALYGALSVLLWGFGYTGTHELSGF
                     YWHAHEMIWGYAGLVVIAFLLTAVATWTGQPPTRGGVLVGLTIFWLAARIAAFIPGWG
                     ASASGILGTLFFWYGAVCMALPVIRSQNQRNYVAVFALFVLGGTHAAFHVQLHNGNLG
                     GLLSGLQSGLVMVSGFIGLIGTRIISFFTSKRLNVPQIPSPKWVAQASLWLPMLTAML
                     MAHGVMPWLSAAFAFAAGVIFTVQVYRWWYKPVLKEPMLWILFAGYLFTGLGLIAVGA
                     SYFKPAFLNLGVHLIGVGGIGVLTLGMMARTALGHTGNPIYPPPKAVPVAFWLMMAAT
                     AVRMVAVFSSGTAYTHSIRTSSVLFALALLVYAWKYIPWLIRPRSDGRPG"
     gene            complement(5985..6857)
                     /locus_tag="WJJ54_001270"
     CDS             complement(5985..6857)
                     /locus_tag="WJJ54_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEZ7342139.1"
                     /translation="MPILNHIALIGVGLIGGSFVLDLKRQGLVRTVTGIDTDRDNLER
                     ALERGVIDRASVAIDADSIGGADLVLIATPVATVPAILTALRPVLPEHTWISDVGSTK
                     SSVIEAFRRCLPDRLHRCIAAHPIAGSDRSGAQAAQFGLFRHRKLIITPHGGEHSDGI
                     ALIENLWRAVGAEIYTMDAQRHDAVFAAVSHMPHLTAFAYVHQILDHPDGQEYLKFAA
                     TGFRDFTRIASGHPAVWADICLANKDSLLQLVQGLGKQLDVLANILTTDDREALYRYF
                     EEAKTTRDRWLDGN"
     gene            6942..7754
                     /locus_tag="WJJ54_001271"
     CDS             6942..7754
                     /locus_tag="WJJ54_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEZ7342140.1"
                     /translation="MDKIRVAAVQMVSGVSPETNVAAMKRLVARAAEQGVDWVLLPEY
                     WVLMGANDTDKLALAEPLGGGRFQTALSETAKECGVVLFGGTVPLQSPEAGKVMNTLL
                     VYGRDGKRTGLYHKMHLFGFSGLGERYAEADTIRAGGEVPHLSAEGVPVAAGICYDVR
                     FPEFFRRQLPFDVLMLPAAFTHTTGKAHWELLLRARAVENQCYVVAAAQGGLHENGRR
                     TFGHSMIVDPWGDVLDVLPEGEGVVTADIDANRLNSVRNRLPALKYRVLDAV"
BASE COUNT         1685 a         2183 c         2301 g         1717 t
ORIGIN      
        1 ggcgaacccc gacagtttgc ggaatcaaac ggctttggtc ggagtggcag cctaatccac
       61 tataaaaatc gtgggcagag cccacgctac ataaggagaa tctagaaatg ccgcaaatta
      121 aaattcccgc cgtttactac cgtggcggta catcaaaagg cgtgtttttc aaacgttccg
      181 acctgcccga ggcggcgcgg gaagcgggaa gcgcacgcga caaaatcctc ttgcgcgtac
      241 tcggcagccc ggatccctac ggcaagcaga tagacggttt gggcaacgcc agctcgtcca
      301 ccagcaaggc ggtgattttg gacaagtccg aacgcgccga tcacgatgtc gattaccttt
      361 tcgggcaagt ttccatcgac aaaccttttg tcgattggag tggcaactgc ggcaacctca
      421 ccgccgccgt gggcgcattt gccatcgagc aaggcttggt cgataaaggc aagattcctt
      481 cagacggcat ctgcacggtc aaaatctggc agaaaaacat cggcaaaacc attattgccc
      541 atgtaccgat gcaaaacggc gcagttttgg aaacaggcga ttttgagctc gacggcgtaa
      601 cgttcccggc agccgaagta caaatcgaat ttcttgatcc agccgacggt gaaggcagta
      661 tgttcccaac cggcaatttg gtcgatgaaa ttgatgtgcc gaatataggc cgtttgaaag
      721 ccacgctcat caacgcgggt attccgaccg ttttcctgaa tgccgccgac ttgggctaca
      781 cgggcaaaga gttgcaagac gacatcaaca acgatgccgc ggctttggaa aaattcgaga
      841 aaatccgcgc ttacggtgcg ctgaaaatgg gtctgatcag cgacgtatcc gaagctgccg
      901 ctcgcgcgca cacgccgaaa gtcgccttcg tcgcgcccgc cgccgattac accgcctcca
      961 gtggcaaaac cgtgaatgcc gccgacatcg atttgctggt acgcgccctg agcatgggca
     1021 aattgcacca cgcgatgatg ggtaccgcct ctgttgccat tgcgaccgcc gccgccgtgc
     1081 ccggtacgct ggtcaacctt gccgcaggcg gcggaacgcg taaagaagtg cgcttcgggc
     1141 atccttccgg cacattgcgc gtcggtgcag ccgccgaatg tcaggacgga caatggacgg
     1201 ccaccaaagc ggttatgagc cgcagcgcac gcgtgatgat ggaaggttgg gtcagggtgc
     1261 cggaagattg tttttaaatt gacgtagcat gggtttgccc gcgagccata aacaggtcgt
     1321 ctgaaaaaca agtaaacatc aaatcactga ccattccttt cccttgccct gtggcggaag
     1381 gcggcaaatc acaaggaaga acacggaaac cccgataaaa gacagcttcc cgtattaccg
     1441 tcattcccgc gcaggcggga atctagacct gtcaatatgg aggattggta ggggaaaaca
     1501 ggtttcgtga gttctacatt ctggattccc gccacagcct gtcctcgcgt aggcggggac
     1561 ggaataacga tagaaaatgc ggcatacgct ttgcccaaag aggccgtctg aaacaccttg
     1621 cgcctgatgt ctgccttttt cagacgaccc cacaccaaaa aaacaaccac aaactacaag
     1681 gagaaacatc atgtccgacc aactcatcct cgttctgaac tgcggcagtt catcgctcaa
     1741 aggcgccgtt atcgaccgaa aaagcggcag cgtcgtccta agctgcctcg gcgaacgcct
     1801 gaccacgccc gaagccgtca ttacgttcaa caaagacggc aacaaacgcc aagttcccct
     1861 gagcggccga aattgccacg ccggcgcggt gggtatgctt ttgaacgaac tggaaaaaca
     1921 cggtctgcac gaccgcatca aagccatcgg ccaccgcatc gcccacggcg gcgaaaaata
     1981 cagcgagtct gttttgatcg accaggccgt aatggacgaa ctcaatgcct gcattccgct
     2041 tgcgccgctg cacaaccccg ccaacatcag cggcatcctt gccgcacagg aacatttccc
     2101 cggtctgccc aatgtcggcg tgatggatac ttcgttccac caaaccatgc cggagcgtgc
     2161 ctacacttat gccgtgccgc gcgagttgcg taaaaaatac gctttccgcc gctacggttt
     2221 ccacggcacc agtatgcgtt acgttgcccc tgaagccgca cgcatcttgg gcaaaccttt
     2281 ggaagacatc cgcatgatta ttgcccactt aggcaacggc gcatccatta ccgccatcaa
     2341 aaacggcaaa tccgtcgata ccagtatggg tttcacgccg atcgaaggtt tggtaatggg
     2401 tacacgttgc ggcgacatcg atccgggcgt atacagctat ctgacttccc acgccgggat
     2461 ggatgttgcc caagtggatg aaatgctgaa caaaaaatca ggtttgctcg gtatttccga
     2521 actttccaac gactgccgca ccctcgaaat cgccgccgac gaaggccacg aaggcgcgcg
     2581 cctcgccctc gaagtcatga cctaccgcct cgccaaatac atcgcttcga tggctgtggc
     2641 ctgcggcggc gttgacgcac tcgtgttcac cggcggtatt ggcgaaaact cacgtaatat
     2701 ccgagccaaa accgtttcct atcttgattt cttgggtctg cacatcgaca ctaaagccaa
     2761 tatggacaaa cgctacggca attcgggtat tatcagcccg accgattctt ctccggctgt
     2821 tttggttgtc ccgaccaatg aagaactgat gattgcctgc gacactgccg aacttgccgg
     2881 catcttgtag ccaaaaaagg gacgagtccg cacaatgccg tctgaaattt tcagacggca
     2941 ttttgtttgg attttgggcg tacaatacgg aaaacatgac gataaggaca caaaccatgg
     3001 cacagttttt cgctattcat cccgacaatc cccaagaacg cctcatcaag caggcggttg
     3061 aaatcgtcaa tcaaggcggc gtggtggttt atccgaccga ttcgtgttac gccttgggtt
     3121 gcaaactcgg cgataaggcg gcgatggaac gcatactctc catccgcaaa atcgatttga
     3181 aacaccacct gaccctgatg tgcgccgatt tgagcgagtt gggcacgtac gccaaaattg
     3241 acaacgtaca gtttcgtcag cttaaagccg ccacgcccgg gccttatacc tttatcttgc
     3301 aggcgacgaa ggaagtgccg gcgcgcacgc tgcacccgaa acgcaaaacc atcgggctgc
     3361 gtattcccga taatgccatt gcacaagccc tgctggggga attgggcgag ccgcttttaa
     3421 gctgcaccct gatgctgccc gaagacggcg aaccattgac cgatccttat gaaatccgcg
     3481 agcgtttgga acacgccgtc gatttggtga ttgacggcgg ctggtgcgga accgagccga
     3541 ccaccgtcgt cgatatgacc gacggcacgg aactggtgcg ccggggttgt ggcgatacgg
     3601 cggtgttcgg tttgtaggga aaccgatgcc gtctgaagca tcggctgttc agacggcatt
     3661 gcgcgccttg ccggcggcag tccgaaatgc cggcgcgtat cgcgctcggt cggaatatcc
     3721 gtttgaaacg gcattttgat gcattactgc accgcaatcg gaattctcgg ttcgtagagc
     3781 aggtcgtagg tcggcttgtt gagcaggtct tggagcgtga aaccgtccag atacgtgaaa
     3841 aacgacttca tcgcgccgcc gagtatgccc gtcagccggc aggacggtgt aatcaggcat
     3901 tcgttgttct cgcccatgca ctcgaccagc tgcatcggtt cgaggtggcg gacaaccgag
     3961 ccgatgttga tgcggtcggg cggtgcggca agccgcagac cgccgccttt tccgcgcaca
     4021 ctgtggagga agccgccttt gaccagcgcg gtaacgacct tcatcagatg gcttttggaa
     4081 atgccgtagg ttacggcgat ggtactgatg ttgaccagcg catcgtcgtt gatggcagtg
     4141 tagataagga cgcgcagccc gtagtccgta tgttgtgtca aatacatgat tttctcggta
     4201 tggattgtta ttcttatcgg tacggtttaa ggttcacgga caatacctta atggttgaaa
     4261 ccctgtccgt cggggcggta gaatgcagcc tgtctgcggc ggtatgccgt ctgaaacatc
     4321 cgcgctaccg tttgataatt tgttattgta actcaaaatc atgaaaccgt tgaaacgaca
     4381 tcccgccctt atcgggcttt cgcgtgacca ccaccattcg ctttccctgt gcgtgcgtct
     4441 gttgcggacg ccggaagaaa ggcatcggga cgaactcgaa ccgcattttg ccgaattgga
     4501 aacccatttt cgcgaagaag aagccaagtt tgccccaatt tggcagaatg tcgcccccga
     4561 attgaaacaa cgtttcgaga aagaccacgc ccgactgcgg cagatgatgg caagccccga
     4621 atacggtaac gcggcgtgga ataccgcttt tgccacaacc ctgcgcgacc acgcgcgctt
     4681 tgaagaacgc gagctgtttc ccgccgccga accgtttttg ccggcatgat tccgttttgc
     4741 ggcaaatata ttaatgataa acaaggaaca cacatgaaat ttaccaagca ccccgtctgg
     4801 gcaatggcgt tccgcccatt ttattcgctg gcggctctgt acggcgcatt gtccgtattg
     4861 ctgtggggtt tcggctacac gggaacgcac gagctgtccg gtttctattg gcacgcgcat
     4921 gagatgattt ggggttatgc cggactggtc gtcatcgcct tcctgctgac cgccgtcgcc
     4981 acttggacgg ggcagccgcc cacgcggggc ggcgttctgg tcggcttgac tatcttttgg
     5041 ctggctgcgc ggattgccgc ctttatcccg ggttggggtg cgtcggcaag cggcatactc
     5101 ggtacgctgt ttttctggta cggcgcggtg tgcatggctt tgcccgttat ccgttcacag
     5161 aatcaacgca actatgttgc cgtgttcgcg ctgttcgtct tgggcggcac gcatgcggcg
     5221 ttccacgtcc agctgcacaa cggcaaccta ggcggactct tgagcggatt gcagtcgggc
     5281 ttggtgatgg tgtcgggttt tatcggtctg attggtacgc ggattatttc gttttttacg
     5341 tccaaacggt tgaatgtgcc gcagattccc agtccgaaat gggtggcgca ggcttcgctg
     5401 tggctgccca tgctgaccgc catgctgatg gcgcacggcg tgatgccttg gctgtcggcg
     5461 gctttcgcgt ttgcggcagg tgtgattttt accgtgcagg tgtaccgctg gtggtataaa
     5521 cccgtgttga aagagccgat gctgtggatt ctgtttgccg gctatctgtt taccggattg
     5581 gggctgattg cggtcggcgc gtcttatttc aaacccgctt tcctcaatct gggtgtgcat
     5641 ctgatcgggg tcggcggtat cggcgtgctg actttgggca tgatggcgcg taccgcgctc
     5701 ggtcatacgg gcaatccgat ttatccgccg cccaaagccg ttcccgttgc gttttggctg
     5761 atgatggcgg caaccgccgt ccgtatggtt gccgtatttt cttccggcac tgcctacacg
     5821 cacagcatac gcacctcttc ggttttgttt gcactcgcgc ttttggtgta tgcgtggaag
     5881 tatattcctt ggctgattcg tccgcgttcg gacggcaggc ccggttgaga caaaccgccg
     5941 cagatttcgg gtctgggcgg tttgcttttc agacggcagg gcggtcagtt gccgtccagc
     6001 cagcggtcgc gtgtggtttt ggcttcttca aaatagcggt acagggcttc gcggtcgtcg
     6061 gtggtcagga tgtttgccaa aacgtccaac tgtttgccca agccttgaac cagttgcagc
     6121 aggctgtctt tgttggcaag gcagatgtcc gcccacacgg cgggatgacc ggaggcgatg
     6181 cgggtgaagt cccgaaagcc cgtggcggcg aatttcagat attcctgtcc gtcggggtgg
     6241 tcgagaatct ggtggacata ggcgaaggcg gtcaggtggg gcatatggga gacggcggcg
     6301 aaaaccgcgt cgtggcgttg cgcgtccatc gtataaattt ccgccccgac cgcgcgccac
     6361 aggttttcta tcaaggcaat gccgtctgaa tgttcgccgc cgtgtggcgt gatgatgagt
     6421 tttctgtggc ggaacagccc gaactgcgcg gcttgcgcac cgcttctgtc cgaaccggca
     6481 atcgggtggg cggcgatgca gcggtgcagg cggtcgggca gacagcggcg gaaggcttcg
     6541 atgaccgaag atttggtgct gccgacatcg gaaatccaag tgtgttccgg caaaacgggg
     6601 cgcagcgcgg tcaaaatggc gggaacggtg gcgacgggcg tggcaatcag taccaagtcc
     6661 gcaccgccga tgctgtccgc gtcgatggca acggaagccc ggtcaatcac gccgcgttcc
     6721 aatgcacgtt cgaggttgtc gcggtcggtg tcgataccgg taacggtgcg gacgagtccc
     6781 tgccttttga ggtcgagaac gaacgaaccg ccgatcagcc ctacaccgat gagggcaata
     6841 tggttcaaaa tgggcatttg tgtaaacggt tttcgcaaag taccgtcatg gtagcctatc
     6901 ggcggaatat gccgcaaggt cggcaggaaa aaggagaaga aatggacaaa atcagagttg
     6961 ccgccgtgca gatggtgtcg ggcgtgtcgc cggaaaccaa cgtcgctgcc atgaaacgcc
     7021 tggtcgcacg ggcggcggag cagggtgtgg attgggtgct gctgcccgaa tattgggtgc
     7081 tgatgggcgc aaacgatacc gacaaactcg cgcttgccga gcctttgggc ggcggacgct
     7141 ttcagacggc attgagcgaa acggcgaaag aatgcggcgt ggtgctgttc ggcggaaccg
     7201 tgccgctgca aagccccgag gcgggcaagg tcatgaatac tttattggtg tacgggcgcg
     7261 acggcaaacg gacggggctg taccacaaaa tgcacctctt cggcttttcc ggtttgggcg
     7321 aacgctatgc cgaagccgat accatccgcg cgggcgggga agtgccgcac ttgtcggcag
     7381 agggcgtgcc ggtggcggca ggtatttgtt acgatgtccg ctttcccgaa tttttccgcc
     7441 gccagctgcc gtttgacgta ttgatgctgc ccgctgcgtt tacgcacacg acgggcaagg
     7501 cgcattggga gctgctgctg cgcgcgcgtg ccgtcgaaaa ccaatgttac gtcgtggcgg
     7561 cggcacaggg cggtttgcac gaaaacggac ggcgcacgtt cggacacagc atgattgtcg
     7621 atccgtgggg cgacgtgttg gacgtattgc ccgaaggcga aggcgttgtt acggcagaca
     7681 tcgatgccaa ccgcctgaac agcgtccgca accgcctgcc cgccttgaaa taccgggttt
     7741 tggatgccgt ctgaaggttc agacggcatc ggtgccgggg aatcagcggg ctgtaggatg
     7801 ggcttcagcc tgccatttcc atcaatccca catttctacc gttttcatcg aatccatcga
     7861 atccgcccct ttcgacgacc cagtcc
//
LOCUS       DAWKJW010000086         7875 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.086, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000086 DAWKJW010000000
VERSION     DAWKJW010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7875)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7875)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7875
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.086"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(299..1216)
                     /locus_tag="WJJ54_001272"
     CDS             complement(299..1216)
                     /locus_tag="WJJ54_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7342141.1"
                     /translation="MEKAEHLNSSRFVNLVKSGGGSYVEGSYRFDTLSNGISIHGGTV
                     TARCDFCSSRLAEPYVSFVLLLEGSLNFGINRSRFQIDADGGKIVLIAVGEEVLFSRY
                     LYRGGKTVKMTIKGMEQWLLRPEYACFTPILYREPVRIWNLSPNLRGLAASCLQAVPK
                     GHLGETLRREADVLRLLSDLWDTVSDGIGPAAGQTAEADAMPSEDFSRTLNAAFADGA
                     HQVNRLADALNISERTLQRRMRDHFGITASEWLHHKQMQHALYLLQNGGKSIGETAYL
                     CGYRHVSSFTQAFRQYFGSTPAETKKENR"
     gene            1389..2189
                     /locus_tag="WJJ54_001273"
     CDS             1389..2189
                     /locus_tag="WJJ54_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ7342142.1"
                     /translation="MSPSPFIEMKDVAFAYGDRPILKNINFSIPQGNFAAVMGGSGSG
                     KTTLMRLITGQIRPQSGQVLIEGRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFD
                     NIAFPMRELTRLPEAVIRDLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALD
                     PEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSVMVTHDIEKSLEIVDQVIFLAH
                     GEIMFSGSPQEMRELDSPWVRQFVGGLADGPVAYRYPAQTSLQQDLLG"
     gene            2237..3013
                     /gene="mlaE"
                     /locus_tag="WJJ54_001274"
     CDS             2237..3013
                     /gene="mlaE"
                     /locus_tag="WJJ54_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HEZ7342143.1"
                     /translation="MNFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVR
                     QVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLA
                     AILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIF
                     NVAGIFGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQ
                     GFHCVPTSEGILRASTRTVVSSALTILAVDFILTAWMFTD"
     gene            3064..3558
                     /gene="mlaD"
                     /locus_tag="WJJ54_001275"
     CDS             3064..3558
                     /gene="mlaD"
                     /locus_tag="WJJ54_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HEZ7342144.1"
                     /translation="MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGNSGKTYTVY
                     ADFGDIGGLKVNAPVKSAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQIL
                     TSGLLGEQYIGLQQGGDTENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNADGGNAE
                     KAAE"
     gene            3595..4185
                     /locus_tag="WJJ54_001276"
     CDS             3595..4185
                     /locus_tag="WJJ54_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HEZ7342145.1"
                     /translation="MKKSSLISALGIGILSIGMAFAAPADAVNQIRQNATQVLSILKS
                     GDANTARQKAEAYAIPYFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGT
                     MLKLKNANVNVKDNPIVNKGGKEIIVRAEVGVPGQKPVNMDFTTYQSGGKYRTYNVAI
                     EGASLVTVYRNQFGEIIKAKGVDGLIAELKAKNGGK"
     gene            4236..4514
                     /locus_tag="WJJ54_001277"
     CDS             4236..4514
                     /locus_tag="WJJ54_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HEZ7342146.1"
                     /translation="MHTELKNGILHIGGDITVKTLTAAAFTRFRQQCRLKDTCAVDLS
                     GVGRADSACVSLLLEVLRGCKGSVRLTGIPESVRALSELYEIKDWLKS"
     gene            4511..5338
                     /locus_tag="WJJ54_001278"
     CDS             4511..5338
                     /locus_tag="WJJ54_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HEZ7342147.1"
                     /translation="MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQAD
                     RYIFAPAARGYRKVAPKPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGIN
                     TTFGLGGLIDIAGAGGIPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
                     SVYSPKNIVFRTPVGRWGTTAVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRA
                     RQTGATPAEGTEDNIDIDELVESAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP"
     gene            5463..5825
                     /locus_tag="WJJ54_001279"
     CDS             5463..5825
                     /locus_tag="WJJ54_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ"
                     /protein_id="HEZ7342148.1"
                     /translation="MYEVNRSVFVLIPLEPFWNWLQTLPGNHLDGLTLEDIQADANSY
                     LVRPCETADEVWDEIETRFEDIFAAELADWCEDEREWPALDADIFNEWFDIQLSTVIT
                     DLEHEPLAREAFQPINLN"
     gene            5822..6208
                     /locus_tag="WJJ54_001280"
     CDS             5822..6208
                     /locus_tag="WJJ54_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEZ7342149.1"
                     /translation="MMKLTVRNYHLDGYGHVNNARYLEFFEEARWAFFEERGLLHELA
                     GLILIVARIDIRYSRPAVEGDVLQFSCRLKTPGTRRIVLTQTITLPNGKTAAEADITL
                     MPVHAATQRTVSLPATLARALEALSE"
     gene            6205..6693
                     /locus_tag="WJJ54_001281"
     CDS             6205..6693
                     /locus_tag="WJJ54_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEZ7342150.1"
                     /translation="MKKILTAAVVALIGILLAIVLIPDSKTAPAFSLPDLHGKTVSNA
                     DLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVK
                     DYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAL
                     AQ"
     gene            complement(6776..6943)
                     /locus_tag="WJJ54_001282"
     CDS             complement(6776..6943)
                     /locus_tag="WJJ54_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HEZ7342151.1"
                     /translation="MEDDVWPGHRVIVMAGVTVGRGSVVGAGAVVTKDIPPYSLAAGN
                     PAVVKKNLPEG"
     gene            complement(6910..7290)
                     /locus_tag="WJJ54_001283"
     CDS             complement(6910..7290)
                     /locus_tag="WJJ54_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-o"
                     /protein_id="HEZ7342152.1"
                     /translation="MGSKFFFLLLRFAGSGLPPSHMRGIGIVGRRVRGFLARRVSPHI
                     GRGVNIERGAYVFPDTVLGDGSGIGANCEICRGLVVGKNVMMEPECLFYSNNHKFDRS
                     KNALRATRKSVRLRWRTMSGRGTG"
     gene            7300..7426
                     /locus_tag="WJJ54_001284"
                     /pseudo
     CDS             7300..7426
                     /locus_tag="WJJ54_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            7528..7743
                     /gene="rpmE"
                     /locus_tag="WJJ54_001285"
     CDS             7528..7743
                     /gene="rpmE"
                     /locus_tag="WJJ54_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HEZ7342153.1"
                     /translation="MKQGIHPNYHEVNVTCSCGNKFATKSAMEKENFNIEVCSLCHPF
                     YTGTQKIVDTTGRVDKFNNKFGNLFKR"
BASE COUNT         1882 a         2247 c         1955 g         1791 t
ORIGIN      
        1 taaaacaatg tagttcataa ccatttattt caatcaatac tgcctcttca atggtgttat
       61 ctaacttttt gattttacat ttatataaca tttatcttgc ctttggataa attgttttgt
      121 tttttggatt gttattcaaa gttctccaaa agtcttttcc tgattttgta tgtatcgtgg
      181 taatactacc attttcattg gttccaacaa aaataaattt agattgacct ttggaatcag
      241 tacccaaaaa ctgaacatat ccagacatgc ggatttcggg ttttaaatca aatgcggctt
      301 accggttttc ttttttggtt tccgcaggcg tgctgccgaa atattgcctg aatgcctgag
      361 taaagctgga aacgtggcgg tagccgcaca aatacgcggt ttcgcctatg cttttgcccc
      421 cgttttgcaa caggtagagc gcgtgctgca tttgtttgtg gtgcagccac tcgcttgcgg
      481 taatgccgaa atggtcgcgc atacggcgtt gcagcgtcct ttcgctgatg ttcagcgcgt
      541 ctgccagccg gttgacttgg tgtgcgccgt cggcaaacgc ggcatttagg gtgcggctga
      601 agtcttcaga cggcatagcg tctgcttccg ccgtttgccc cgccgccggc ccgatgccgt
      661 ctgaaaccgt gtcccacaaa tccgacagca gccgcaaaac gtccgcctcg cggcgcaatg
      721 tttcgcccaa atgccccttt gggacggctt gcaggcagga tgccgccaaa ccgcgcaggt
      781 ttggggacaa attccatatt ctgaccggtt cgcggtaaag tatgggtgta aaacacgcat
      841 actccggacg cagcagccat tgctccatac ctttaattgt cattttgacc gttttgccgc
      901 ctcggtaaag atagcggctg aacaagactt cttccccgac agcaatcagg acgatcttgc
      961 caccgtccgc atcgatttgg aatcggctcc ggttgatgcc gaagttcaaa gagccttcca
     1021 gcaacagcac gaacgacaca taaggttcgg cgaggcggct gctgcaaaaa tcacaccgtg
     1081 ccgttactgt gccgccgtgg atggaaatgc cgttggacaa agtatcgaaa cggtagctgc
     1141 cctccacata gctgccgccg ccgcttttga ctagattgac gaaccggctg ctgttcaaat
     1201 gttctgcttt ttccatagtt ttctgataaa ggttatcatt tgaaagataa catttttcgc
     1261 cacagcaaac aatccgccgc cgacaacggc attttcacaa catttaccgt ccgtatgccg
     1321 tctgaaaatt gcccgtcttc ccgataagcc ttaaaataca cgccgtcaaa cctaccgtcc
     1381 gtccgtacat gagcccatcc ccctttatcg aaatgaaaga cgtcgccttc gcgtatggcg
     1441 accgcccgat tctgaagaac atcaatttca gcattccgca aggcaatttt gctgccgtaa
     1501 tgggcggttc gggcagcggc aaaaccacgc tgatgcgact gattacagga cagattcgtc
     1561 cgcagtccgg gcaggttttg attgaaggac gggatttggc gggcttttcg gctgacgagt
     1621 tgtatgaaca ccgccgccgt atgggcgtat tattccaaca cggcgcgctg tttaccgatt
     1681 tgtcggtatt cgacaatatc gcttttccga tgcgcgaact gacacgcctg ccggaagcgg
     1741 tgattcgaga tttggttttg ttgaaactga acgcggtcgg tttgcgcggc gtggaaaacc
     1801 tgatgccgtc cgagttgtcc ggcgggatgt cgcgccgcgt cgcgcttgcc cgcacgattg
     1861 cgctcgaccc tgaaattatg ttgtacgacg aaccgtttac cggcctcgat ccgatttcct
     1921 tgggcgtgat tgcccacttg atcagccgcg tcaataaggc tttgcgttcg accagcgtta
     1981 tggtaacgca cgacattgaa aaatctttgg aaatcgtcga tcaggtgatt tttttggcgc
     2041 acggcgaaat tatgttctcc ggctcgccgc aggaaatgcg cgaactggat tcgccttggg
     2101 tgcgccagtt tgtcggcggg ctggcagacg gccccgtagc ataccgctat ccggcgcaaa
     2161 cgtcgttgca gcaggatttg ctcgggtaaa tgagcaggtg ccgtctgaaa ccgttgaact
     2221 ttacatatag aaatttatga attttatccg ttccgtcggg gcgaaaaccc tcggccttat
     2281 tcaatccctc ggcagtatta cgctgtttct gctgaacatt ctggcgaagt ccggtacggc
     2341 tttcgtccgt ccgcgcctga gcgtgcgcca agtgtatttc gccggcgtgc tgtcggtgct
     2401 gattgttgcc gtttcggggc tgttcgtcgg tatggttttg ggtttgcagg gttatacgca
     2461 gttgtcgaaa ttcaaatccg ccgatatttt gggctatatg gtcgcggctt cgctgttgcg
     2521 ggaactgggt ccggtgttgg cggcgatcct gtttgccagc agcgcgggcg gtgcgatgac
     2581 cagcgaaatc ggtctgatga aaacgaccga acagctcgaa gcgatgaacg tgatggcggt
     2641 aaaccctgtc gcccgcgtgg ttgcgccgcg cttttgggcg ggcgtgtttt ccatgccgct
     2701 tttggcttcg attttcaacg tggcgggtat tttcggcgcg tatttggtcg gtgtaacctg
     2761 gctgggcttg gacagcggca ttttctggtc gcaaatgcag aacaacatca cgatacatta
     2821 cgatgtaatc aacggtctga tcaaatccgc cgcgttcggc gtggcggtaa cgctgattgc
     2881 cgtgcatcag ggcttccact gcgtcccgac ctcggaaggc attttgcgcg ccagcacgcg
     2941 cacggtggtt tcgtccgccc tgacgatttt ggcggtcgat tttatattga ccgcgtggat
     3001 gtttacagat tgacagggcg tctgaagacg aaacgcggaa catcggatat tcaaggaact
     3061 ttaatgaaaa agaacatatt ggaattttgg gtcggactgt tcgtcctgat tggcgcggcg
     3121 gcggttgcct ttctcgcttt ccgcgtggcg ggcggcgcgg cgttcggcaa ttccggcaag
     3181 acttataccg tatatgccga tttcggcgac atcggcggtt tgaaggtcaa tgcccccgtc
     3241 aaatccgcag gcgtattggt cgggcgcgtc ggcgctatcg gacttgaccc gaaatcctat
     3301 caggcgaggg tgcgcctcga tttggacggc aagtatcagt tcagcagcga cgtttccgcg
     3361 caaatcctga cttcgggact tttgggcgag cagtacatcg ggctgcagca gggcggcgac
     3421 acggaaaacc ttgctgccgg cgacaccatc tccgtaacca gttctgcaat ggttctggaa
     3481 aaccttatcg gcaaattcat gacgagtttt gccgagaaaa atgccgacgg cggcaatgcg
     3541 gaaaaagccg ccgaataaac gtatgccatc atattcaaac taggacactt aatcatgaaa
     3601 aaatcctccc tcatcagcgc attgggcatc ggtattttga gcatcggcat ggcatttgcc
     3661 gcccctgccg acgcggtaaa ccaaatccgt caaaacgcca ctcaagtatt gagcatctta
     3721 aaaagcggtg atgccaacac cgcccgccaa aaagccgaag cctatgcgat tccctatttc
     3781 gatttccaac gtatgaccgc attggcggtc ggcaaccctt ggcgcaccgc gtccgacgcg
     3841 caaaaacaag cgttggccaa agaatttcaa accctgctga tccgcaccta ttccggcacg
     3901 atgctgaaat taaaaaacgc caacgtcaac gtcaaagaca atcccatcgt caataaaggc
     3961 ggcaaagaaa tcatcgtccg cgccgaagtc ggcgtacccg ggcaaaaacc cgtcaacatg
     4021 gacttcacca cctaccaaag cggcggtaaa taccgtacct acaacgtcgc catcgaaggc
     4081 gcgagcctgg ttaccgtgta ccgcaaccaa ttcggcgaaa ttatcaaagc gaaaggcgtg
     4141 gacggactga ttgccgagtt gaaagccaaa aacggcggca aataaccgac aaaccatacc
     4201 gtccgagggc ggtatgggtt ttccgagcaa acgctatgca tacagaactc aaaaacggaa
     4261 tattgcacat cggcggcgac atcaccgtca aaaccctgac cgccgccgct tttacccgct
     4321 tcagacagca atgtcgtctg aaagacacct gcgcggttga tttgagcggc gtcggacgcg
     4381 ccgattccgc ctgcgtgtcg ctgctgctcg aagtgctgcg cggttgcaaa ggcagcgtca
     4441 ggctgaccgg cattcccgaa tccgtgcgcg cgctgtccga actgtacgaa atcaaagact
     4501 ggctgaaatc atgaaaaaaa ccgcctatgc cttcctcctg ctgatcgggt tcgcttccgc
     4561 ccctgcattt gccgaaaccc gccccgccga cccttatgaa ggctacaacc gcgccgtttt
     4621 caaattcaac gaccaagccg accgctacat tttcgcccct gccgcgcgcg gctaccgcaa
     4681 agttgcgccg aaacccgtcc gcgccggcgt gtccaatttt tttaacaacc tgtgcgacgt
     4741 ggtcagcttc ggtagcaata tcttgcgctt ggacatcaaa cgcgcaagcg aagaccttgt
     4801 ccgcgtcggc atcaacacca ctttcggttt gggcgggctt atcgacatcg ccggcgcggg
     4861 cggcattccc gacaataaaa acaccttggg cgacacgttt gcttcgtggg gatggaaaaa
     4921 cagcaattat ttcgtgttgc ccgtcttagg gccgtccacc gtccgcgacg cgctcggcac
     4981 gggtattacc tccgtttatt cgcccaagaa tatcgtcttc cgcacccctg tcggacgctg
     5041 gggcacgact gccgtatccg ccgtcagtac gcgcgaaggt ctgctcgatt tgaccgacag
     5101 tctggacgaa gccgccatcg acaaatacag ctacacgcgc gacctctata tgaaagtccg
     5161 tgcgcggcag accggtgcaa cacctgccga aggtacggaa gataacatcg acatcgacga
     5221 attggtcgaa agtgccgaaa ccggcgcggc ggaaactgcc gttcaagaag attccgtatc
     5281 cgaaacacag gcagaagcag caggggaagc cgaaacgcaa cctggaacac aaccttaaag
     5341 ccatgccgtc tgaaaatccg tgttcggacg gcattccctt ctgtcggaac ggacagtccg
     5401 aaaccacaga ttgggctata atctcttttt tgcgcatacc gcgcgacagc aaaggaaaaa
     5461 ccatgtacga agtcaaccgc agcgtattcg tcctcatccc tttagaacct ttttggaact
     5521 ggctgcaaac cctgccgggc aaccaccttg acggactgac cctcgaagac atccaagccg
     5581 acgcgaattc ctaccttgtc cgcccgtgcg aaaccgccga cgaagtatgg gacgaaatcg
     5641 aaacccgttt tgaagacatt ttcgccgccg aacttgccga ctggtgcgaa gacgaacgcg
     5701 agtggcctgc gctcgatgcc gacattttca acgaatggtt cgacatccag ctttctaccg
     5761 tcatcaccga cctcgaacac gaaccgcttg cccgcgaagc cttccaaccc atcaacctga
     5821 actgatgaag ctgaccgtcc gcaactacca tctcgacggc tacggccatg tcaacaatgc
     5881 gcgctacctc gaatttttcg aagaagcgcg ctgggcgttt tttgaagaac gcggactgct
     5941 gcacgagttg gcaggcctca tactgattgt cgcccgcatc gacatccgat acagccgccc
     6001 cgccgtcgaa ggcgacgtat tgcagttttc atgccgcctg aaaacccccg gcacgcgccg
     6061 tattgtgctg acccagacga ttacactgcc aaacggcaaa accgccgcag aagccgacat
     6121 caccctgatg cccgtccacg ccgccacaca acgcaccgtc agcctgcccg ccacccttgc
     6181 ccgcgcattg gaagccttgt ccgaatgaaa aaaatactca ccgccgccgt cgtcgcactg
     6241 atcggcatcc tccttgccat cgtcctcatc cccgacagca aaaccgcgcc cgccttctcc
     6301 ctgcccgacc tgcacggaaa aaccgtttcc aacgccgacc tgcaaggcaa agtaaccctg
     6361 attaattttt ggtttccctc ctgtccgggt tgtgtgagcg aaatgcccaa aatcattaaa
     6421 acggcaaatg actataaaaa caaaaacttc caagtccttg ccgtcgccca gcccatcgat
     6481 ccgatagaaa gcgtccgcca atatgtcaaa gactacggtt tgccgtttac cgtcatgtat
     6541 gatgcggaca aagctgtcgg acaggcgttc ggcacacagg tttatccgac ttccgtcctt
     6601 atcggcaaaa aaggcgaaat cctcaaaacc tacgtcggcg aacccgattt cggcaaactc
     6661 taccaagaaa tcgataccgc gctggcacaa tagcgatgcc gtctgaggcg caaaaaaaac
     6721 agaaacgatg ttcctgtttt tttagatcat ccgccccgac acgttcagac ggcattcaac
     6781 cttccggcag attctttttc accactgccg gattgcctgc cgccaaagag tagggcggaa
     6841 tgtcttttgt aaccaccgcg cctgcgccca cgaccgaacc gcgtccgacg gttacgcccg
     6901 ccattacaat caccctgtgc cccggccaga catcgtcctc caacgtaatc ggacggattt
     6961 ccgtgtagcc ctcaaagcgt tttttgaacg gtcaaacttg tggttatttg aataaaacag
     7021 acattccggc tccatcatca catttttgcc gaccaccagc ccacggcaga tttcacagtt
     7081 tgccccgatg cccgagccgt cgcccaaaac cgtatccgga aacacatacg ccccgcgttc
     7141 gatattgacc ccgcgtccga tatgcggaga aacccgccgc gccaaaaaac cgcgcacccg
     7201 tctgccgacg atgccgatgc cgcgcatatg tgacggcggc aaccccgaac cggcaaaacg
     7261 cagcagcagg aaaaagaatt ttgatcccat caaacctccc tcaaaagaac tttttatagt
     7321 ggattaacaa aaattaggac aaggcaacga agccgcagac agtacagata gtacggcaag
     7381 gcgaggcaac gctgtactgg tttttgttaa tccactatac attttatcga atatactctt
     7441 gacgtaacaa cagaaaatag agagaatgtc ggacttgtct gtagcatagg tacatcccct
     7501 atgcccgctt ttttgaaagg aaatcaaatg aaacaaggta ttcacccgaa ctaccacgaa
     7561 gtcaacgtta cctgctcttg cggcaacaaa ttcgcaacca aatccgcgat ggaaaaagaa
     7621 aacttcaata tcgaggtttg ctccctgtgc cacccgttct ataccggcac ccaaaaaatc
     7681 gttgatacca ccggccgcgt ggacaaattc aacaacaaat tcggcaacct gttcaaacgc
     7741 tgattgccgc tttgcaagaa ttaagccctg ccatcatttc gatggcaggg ctttttaata
     7801 tttggcacac tgacttctta tctatatagt ggattaacaa aaatcaggac aaggcgacga
     7861 agccgcagac agtac
//
LOCUS       DAWKJW010000087         7828 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.087, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000087 DAWKJW010000000
VERSION     DAWKJW010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7828)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7828)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7828
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.087"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(121..4290)
                     /locus_tag="WJJ54_001286"
     CDS             complement(121..4290)
                     /locus_tag="WJJ54_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB"
                     /protein_id="HEZ7342154.1"
                     /translation="MTDTAPTDTDPTENGTRKMPSEHRPAPPAKKRRPLLKLSAALLS
                     VLILAVCFLGWLAGTESGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEG
                     ADLKISRFRFAWKPSELMRRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDSIDLPA
                     AVYLDRFETGKISAGKAFDKPTVYLERLDASYRYDIKGHRLDLKAADTPWSNSSGSAS
                     VGLKKPFALDTAIYTKGGLEGKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHP
                     FAESLDKTLEEVLVKGFNINPSAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENT
                     KAGFADRNGIPVRQVLGNFVIRQDGTVHIGNTSVALLGRGGIRLSGKIDTEKDILDLN
                     IGINSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPAN
                     GQRKLVLDTVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRIDPQLPAGNING
                     SINLAGELAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKT
                     DGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFETDLSGAARN
                     LHIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLSLSGGAAVVDTADLMLDGTGVQH
                     RIRTHAAMTLDGKPFKFDLDASGGINRELTRWKGSIGILDIGGAFNLKLQNRMTLEAG
                     AERVAASAANWQAMGGSLNLQHFSWDKKTGISAKGGAHGLHIAELHNFFKPPFEHNLV
                     LNGDWDVAYGRNARGYLNISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGA
                     RFGRINADLDIGNAFGGNMANAPLGGRITASLPDLGALKPFLPAAAQNITGSLNAAAQ
                     IGGRVGSPSVNAAVNGSSNYGKINGNITVGQSNSFSTSPLGGKLNLTVADAEVFRNFL
                     PVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRK
                     WVIDSLKFRHEGTAELSGTVGMENSGPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRY
                     SPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAAPLPVNMNLTLDLN
                     DGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTVSFV
                     GPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGS
                     GSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ
                     LTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRFSGSD
                     KKDSAGNSKGK"
     gene            complement(4345..6192)
                     /locus_tag="WJJ54_001287"
     CDS             complement(4345..6192)
                     /locus_tag="WJJ54_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HEZ7342155.1"
                     /translation="MHDTRTMMIKPTALLLPALFFFPHAYAPAADLSENKAAGFALFK
                     NKSPDTESVKLKPKFPVRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAP
                     DNVKTMLRSKGYFSSKVSLTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEY
                     YRNALENWQQPVGSDFDQDSWENSKTSVLGAVTRKAYPLAKLGNTQAAVNPDTATADL
                     NVVVDSGRPIAFGDFEITGTQRYPEQIVSGLARFQPGMPYDLDLLLDFQQALEQNGHY
                     SGASVQADFDRLQGDRVPVKVSVTEVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKG
                     YIGSVVWDMDKYETTLAAGISQPRNYRGNYWTSNVSYNRSTTQNLEKRAFSGGVWYVR
                     DRAGIDARLGAEFLAEGRKIPGSAVDLGNSHATMLTASWKRQLLNNVLHPENGHYLDG
                     KIGTTLGTFLSSTALIRTSARAGYFFTPENKKLGTFIIRGQAGYTVARDNADVPSGLM
                     FRSGGASSVRGYELDSIGLAGPNGSVLPERALLTGSLEYQLPFTRTLSGAVFHDMGDA
                     AANFKRMKLKHGSGLGVRWFSPLAPFSFDIAYGHSDKKIRWHISLGTRF"
     gene            6568..7797
                     /gene="sstT"
                     /locus_tag="WJJ54_001288"
     CDS             6568..7797
                     /gene="sstT"
                     /locus_tag="WJJ54_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HEZ7342156.1"
                     /translation="MAFGKSLFHAIGRVSLVRQIAAGLALGIVIGSVSPQLGLAAGLF
                     GSLFVGALKAVAPVLVFILVAATIAQHQKGNKAHIRPIIILYLIGTFSAALTAVIAGM
                     VFPTHIVLAGVGDVSAAPPSGIVEVLKSLLMNLVANPINAIANANYIGILAWALVLGA
                     ALRNHGSDVTRQVVADLAEAVSTVVKWIIRFAPLGIFGLVSSTIAETGFGALAGYAKL
                     LAVLLGCMAFIALAVNPAIVWWKIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMA
                     LAKKLGLHEDTYSISIPLGATVNMGGAAITITVLAMAAAHTQGIQVDFATALLLSLVA
                     TVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETALNSSTD
                     VLFTAAADFGRQRNRAE"
BASE COUNT         1427 a         2052 c         2478 g         1871 t
ORIGIN      
        1 tcctgatttt tgttaattca ctatatcgat tctgttccct tgcaggcgga cggcggcggc
       61 ggacggtgga aaagcaggtt ttcaaatgtc cggtttggcg gcgcgccgtc tgaaaaccgc
      121 ttattttcct ttgctgtttc cggcggagtc ttttttgtcc gaaccggaga agcggtcgaa
      181 acgtatggtg tatgtcagct cgccgcccga cgaacggctg ccgatacggg caaccgcctg
      241 tatggcgcgg gtcagccggt aaatcagttt gacggactgt tccgcgctgg agatgctgta
      301 ttcgtagccg atgtagagtt tgccggtcag ttgtttgccg acggtcagca cctgttcggc
      361 ggggttgagt tcgccggttt gcgcgttgcg gctgcgcttg ctggtaaagc ccaaatcatc
      421 caccagcccg atgcggtcgt tgatttgtcc ggcaagcaat gcgccggcgg ctgcagacag
      481 ggcggcattg tcgccgctgc tgccgctgcc ggcgcggttg aggataagcc aggagagctt
      541 gtctttttca ctcatcggtt cgtttgccgt cagcgtaatg cgcgggctgt tgaggctgcc
      601 caatatttcc acgcccgcac cgacggggga aaggcggcgt tcggcgcgga tgttgaggtt
      661 ggggtcgttg agcgggccga caaaggagac cgtgcctttg gtaatgtcca aatcctgccc
      721 gtatgcctta taacgccctt tgatgacgcg gaccgtgccc acgccccgca cgcttccgcc
      781 cgattgggcg gtcagggtca gtttgccgcc tatggtaacg tccgcgccgt agccggcgaa
      841 gcggatgccg tcattgaggt ctaaagtcag gttcatattg acggggagcg gtgccgccgc
      901 ctcttttttg acttcgccca atacgacgac atcgtcgccg acggacggca tcgaggattt
      961 ttgcgaaccg aacagcccct gatccgtttt aatcatcccg gtaacggata tgcctttttg
     1021 cggcgaatag cgcaggcggg tgttgccgga aaccgtcagg cggcggttgg ggcgggacag
     1081 gatgcggtat ttgtcgaaca ccgcgccgat atcgacatcg ggtccgctgt tttccatacc
     1141 gaccgtaccg gagagttccg ccgtcccttc gtgacggaat ttcaggctgt cgattaccca
     1201 tttcctgcct gcgatatgcg aacgcagcga accgttgtcc aagatgatgc cttgggtttg
     1261 gttgcggtaa tagagcttgt cgccgttgat gctgccgccc aagtgcgggt cggcgatgct
     1321 gccgccgagg gttacggcgg cattcaggct gcctttgacg gtttgtccga cgggcaggaa
     1381 gttgcggaat acttcggcat cggcaacggt caggttgagt ttcccgccca ggggcgaggt
     1441 actgaaagaa ttactttgcc cgacggtgat gttgccgttg attttcccgt agttgctgct
     1501 gccgttgacg gcggcattga cggacggaga gccgacccgt ccgccgattt gcgcggcggc
     1561 attcaggctg ccggtaatgt tttgcgcggc ggcgggcaga aagggcttca atgcgcccaa
     1621 gtcgggaagg gaggcggtaa tcctgccgcc gagcggtgca tttgccatat tgccgccgaa
     1681 ggcgttgccg atgtccaaat cggcgttaat ccgcccgaaa cgcgcgccgc cgtcaagcag
     1741 gattccgata cggtcgtttt gaaagcgcgt tttcagggaa aatgcgttca aacccaaagc
     1801 ctgcccgccg ggcaatacgg catcgccgct ttgccggctg atattgaggt agccgcgcgc
     1861 gttgcgcccg taggcgacat cccagtcgcc gtttaaaacc agattgtgtt cgaagggcgg
     1921 tttgaagaaa ttgtgcaact cggcgatatg cagaccgtgt gcgccgcctt ttgccgatat
     1981 gccggttttt ttatcccaag aaaagtgttg caggttgagg ctgccgccca ttgcctgcca
     2041 atttgccgca cttgccgcca cgcgttccgc accggcttcg agcgtcatac ggttttgcag
     2101 cttgaggttg aatgcgccgc cgatgtcgag gatgccgatg ctgcctttcc atcgggtaag
     2161 ttccctgttg atgccgcctg aagcgtccaa atcgaatttg aacggtttgc catccagcgt
     2221 catggcggcg tgtgtgcgga tgcggtgctg cacgcccgtg ccgtccagca tcaggtcggc
     2281 ggtatcgaca accgccgctc cgcccgacag cgaaaggcga ctgcctttaa tgtcggcgcg
     2341 tatcgggcgg cttgtgtcgg gcgaaccttt gagcgtgaaa tcgagcgaac ggatgtctgc
     2401 cgccttgccg atgtgcaggt tgcgcgccgc gccggaaagg tcggtttcaa aggttcggat
     2461 gccaccgtcc aaatcgccgg aaaggtgtcc gcgtacattt aaagaccccg cgagtccgaa
     2521 accgaaacgg gataaatcgg gtgcggtgat attgaggtta agccggtcgc cttttttgcc
     2581 gaagccgccg tctgttttaa taatgttccg ccccagccgc aaatcgacgg cggcacgcgg
     2641 aaggtggcgg gactcgtaaa caatgtcggc actgccggca atcggtacgc cgttgaacgt
     2701 gccgggtaaa aaccgcattt tgcctgtgaa tttctctttt gccagttcgc cggcaaggtt
     2761 tattgagccg ttgatattgc ctgccggaag ttgcggatcg atgcgcgaag ggtcgaatgc
     2821 gcgggaacgg atgtccagct tgagcaggcg gtctttaaac agctcgagat agccttgcgc
     2881 ggtcaggctg ccttgcccgg cggcgatgtt gacggtgtcg agcaccagtt tccgctgtcc
     2941 gtttgcgggg tcgcttgcaa tggcgaggct gccgtccgtg cgcgccgtgc cgatgccgag
     3001 ttgccaagag attttgggcg aggcggtcgt gccaccgatg ccgatgctgc cgtccaacct
     3061 gcctttgaac gcggtttgca gtacgtcttc cgcgccgacg gagttgatgc ctatatttaa
     3121 atcgaggatg tctttttcgg tgtcgatttt gcccgacagc ctgatgccgc cccgtccgag
     3181 cagggcgacg gacgtattgc cgatatgcac cgtgccgtcc tgccggatga caaagttgcc
     3241 taaaacctga cggacgggga tgccgttgcg gtcggcaaaa ccggctttag tgttttccaa
     3301 atcgagcgag ccttccagcg cgatgccgtc tgaaaacgac gggatggcgg tcaggtcgaa
     3361 attcagcccg gcatcgggca gggaaggcac gaaggcggac ggattgatgt tgaacccttt
     3421 gaccagtact tcttccaatg ttttatccaa tgattcggca aacgggtgga tgacggattt
     3481 tcccgagagg cggatattgc cgccgtcgat cgccagttcg gcgcgcacat ccttcaggct
     3541 gccgctcagc cgagccgtac tgtgtatggt tttgccttcg agtccgcctt tggtgtaaat
     3601 ggcggtatcg agggcaaacg gttttttcaa gccgaccgag gctgaccccg acgaattgct
     3661 ccacggcgtg tcggcagcct tcaggtcgag gcggtgtcct ttgatgtcat aacggtatga
     3721 agcatccagc cgttcgagat agacggttgg tttgtcaaag gctttgcctg cgctgatttt
     3781 gcccgtctcg aagcggtcga gatagacggc ggcaggcagg tctatgctgt cgggaaggct
     3841 gagcggaggg cgttcttctt taggcggagt cggtttggta acgatggcga tgtcgccggc
     3901 ggaaatttcg gtgatgtgca ggctgcggcg catcagttcg gacggtttcc acgcgaagcg
     3961 gaagcggctg attttaaggt ctgccccctc ggtttctatc gaccagttgt cgccgtcgaa
     4021 gccgtcgagc agcgtgcctt tgaggttttg ggaggaaatg tttacgccga accaagacgg
     4081 gatttggtac agcccgaagc gcaaaccgga ttccgtaccg gcgagccagc cgaggaaaca
     4141 tactgccaaa atcaggacag acagcagtgc cgccgacagc ttcagcagcg ggcggcgttt
     4201 ttttgccggc ggggcagggc ggtgttcaga cggcattttg cgcgtgccgt tttcggtcgg
     4261 atcggtatct gtcggtgcgg tatcggtcat aatgtctgtt tcaaaatagt ttgctgcaat
     4321 gccgtctgaa gcggccgtat cggtttagaa gcgtgttccc aagctgatgt gccagcggat
     4381 tttcttatcg ctgtgcccgt aggcgatgtc gaaggaaaac ggtgcgagcg ggctgaacca
     4441 gcgtacgccc agtcccgaac cgtgtttcag cttcatacgt ttgaaattgg cggcggcatc
     4501 gcccatatcg tggaataccg cgccggaaag ggtgcgcgta aacggcagtt ggtattccag
     4561 gctgcccgtc aagagggcgc gttcgggtag gaccgatccg ttcgggccgg caagtccgat
     4621 gctgtcgagt tcgtaaccgc gcacggaaga cgcgccgccg ctgcggaaca tcagccccga
     4681 ggggacatcg gcattatcgc gggcaacggt gtaacccgct tgtccgcgta tgatgaacgt
     4741 gccgagtttt ttgttttcgg gcgtgaagaa ataacctgcg cgggcagagg tgcggatcag
     4801 cgcggtggag gacaggaatg tgcccaaagt cgtaccgatt ttgccgtcga ggtaatggcc
     4861 gttttcggga tgcagcacgt tgttgagcag ctggcgtttc caagaggcgg tcagcatcgt
     4921 ggcgtggctg ttgcccaaat cgacagccga gccggggatt ttccggcctt ctgcgagaaa
     4981 ttccgccccc agcctggcat cgatgcccgc gcggtcgcgc acataccaga cgccgccgga
     5041 gaaggcgcgt ttttcgaggt tttgggtggt cgaacggttg taggagacgt tgcttgtcca
     5101 gtagttgccc cgatagttgc gcggctggct gatgccggcg gcaagcgtgg tttcgtattt
     5161 gtccatatcc cagacgaccg aaccgatata gcctttgttg aagaggttgt aatagtcgta
     5221 ggcgattttg ccgcccaaac cgtattccga atcgaggcgg atgccggttt cgagtttgtg
     5281 gcgtttgacc tcggttacgc tgactttgac ggggacgcgg tcgccttgga ggcggtcgaa
     5341 gtcggcttgt acggacgcgc cggaataatg cccgttttgt tcgagcgcct gttggaagtc
     5401 gagcagcagg tcgaggtcgt acggcatacc gggctggaaa cgcgcaaggc cggagacgat
     5461 ttgttcgggg taacgctgtg tgccggtgat ttcaaagtcg ccgaaggcga tggggcggcc
     5521 gctgtccacg acgacgttca aatcggcggt ggcggtatcg gggttgacgg ccgcctgcgt
     5581 attgccgagc ttggcaagcg ggtaggcttt gcgcgttacc gcgccgagga cggaagtttt
     5641 gctgttttcc caactgtcct gatcgaaatc gctgcctacc ggctgctgcc agttttccag
     5701 cgcgttgcgg tagtattcgg cgaggttgcc gtctgaaagg atgtcgccga ggatggcgac
     5761 gccgacgttg gcgattttgg tgcgcgggcc cggtgtgatg tgtaccgtat aagctccgtc
     5821 tttttccgtc aggctgactt tgctgctgaa atagcctttg ctgcggagca tcgttttaac
     5881 gttgtccggc gcttcttcgg cgaggaagcc cgtctgttcc ttgtccaata cttcttcctg
     5941 ctgctgcgtg atgagcggca ggtgttcttc gaccatatct ttgatttcac tatcctgcgt
     6001 gtcgatgcgg acggggaatt tgggttttaa tttgactgat tcggtgtcgg ggcttttgtt
     6061 tttgaacaat gcgaaacccg ccgccttgtt ttcggaaagg tcggcggcag gcgcgtatgc
     6121 gtgcggaaag aaaaataaag ccggcaggag cagggcggtc ggtttgatca tcatagtacg
     6181 ggtgtcgtgc atcggtgtgg cggttttcga ttttaacact gttcggacgg ggcgggacgc
     6241 ttcagacggc atactgccgc cggtatttcg gaggttgcgg cccgcctgga atgtatctgc
     6301 ttgttttaag gtattttgtt tccaatccgc atatggaaaa caggctgtgt ttcggaatag
     6361 tgccggaaaa taggcaggat taaataaatt tattttcgtt caataaatta aaccatcacg
     6421 ccgaatgatc aagcaaagcc tgtccggcac tgcatagggc aaatcaacgc aaccccaaaa
     6481 cacagccgaa aaataaaaaa aacacagaga atgagttttc ttttaaaata caacattttt
     6541 taacatatca caacataagg aagaattatg gcgttcggca aatccttatt tcatgcgatc
     6601 ggccgcgtca gcctggtcag gcagattgcc gccggtttgg cgttgggcat cgtaatcggt
     6661 tcggtttcac cgcaactggg cttggcggca ggcttgttcg gcagcctgtt tgtcggcgcg
     6721 ctcaaagcgg tcgcgccggt tttggtattt attttggtgg cggccacaat cgcgcagcac
     6781 caaaaaggca acaaggcgca tatcaggccg attatcatcc tttacctcat cggcacgttt
     6841 tccgcagccc tgaccgccgt catcgccggt atggttttcc cgacgcacat tgttttggcg
     6901 ggcgtgggcg atgtgtccgc cgcgccgcct tccggcattg tggaagtgtt gaaatcgctg
     6961 ctgatgaacc tggtcgccaa cccgattaac gcgattgcca atgccaacta tatcggcatt
     7021 ttggcttggg ctttggtttt gggcgcggcg ttgcggaatc acggttcgga cgttacgcgg
     7081 caggtcgttg ccgatttggc ggaagcggtt tccaccgtcg tgaaatggat tatccgtttt
     7141 gcccctttgg gcattttcgg gctggtgtcg tccacaatcg cggagacggg tttcggcgcg
     7201 ctggcgggtt atgcgaagct gcttgcggtg ctgttgggct gtatggcgtt tatcgcgctg
     7261 gcggtcaatc ccgccatcgt gtggtggaaa atccgccgca atccttatcc gctggtgttt
     7321 acctgcctgc gcgaaagcgg cgtgtatgcc ttctttaccc gttcttccgc cgccaatatc
     7381 cccgtgaata tggctttggc gaaaaaactg gggctgcacg aagacactta ttcgatttcc
     7441 atcccgttgg gggcgaccgt caatatgggc ggcgcggcga ttacgattac cgttttggct
     7501 atggcggcgg cgcacaccca aggcatacag gttgattttg ccaccgcgct actgttgagc
     7561 ctggtggcga cggtcagcgc gtgcggtgcg tccggcgtgg cgggcggttc gctgctgctg
     7621 attccgctgg cgtgcagcct gttcggcatc agcaacgatg tcgctatgca ggtggtcgcc
     7681 gtcggcttca tcatcggcgt gattcaggat tcggcggaaa cggcgttgaa ttcttcaacc
     7741 gacgttttgt ttaccgctgc cgccgatttt ggccgacaga gaaaccgggc ggaataaacc
     7801 aagctatgcc gtctgaagcc cgtttggc
//
LOCUS       DAWKJW010000088         7716 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.088, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000088 DAWKJW010000000
VERSION     DAWKJW010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7716
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.088"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(111..1457)
                     /gene="mnmE"
                     /locus_tag="WJJ54_001289"
     CDS             complement(111..1457)
                     /gene="mnmE"
                     /locus_tag="WJJ54_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEZ7342157.1"
                     /translation="MSDNVPTIAAVATAPGRGGVGVIRISGKNLLPMAQALCGKTPKP
                     RTATYADFTDADGQAIDSGLLLFFAAPASFTGEDVIELQGHGGPVVMDMLLNRCLELG
                     ARLAEPGEFTKRAFLNDKLDLAQAEGVADLIDASSRSAARLALRSLKGDFSRRIHGLV
                     EDLITLRMLVEATLDFPEEDIDFLEAADARGKLDGLRRAVDDVLANAQQGAILREGLN
                     VVLVGAPNVGKSSLLNALAGDEVAIVTDIAGTTRDAVRERILIDGVPVHIVDTAGLRE
                     TDDVVERIGIERSRKAVSEADVALVLVDPREGLNEKTRAILDALPPELKRIEIHSKSD
                     LHTSAAAAFETGADTVIPLSAKTGDGLDALKRTLLREAGWQGESEGLFLARTRHVNAL
                     KAAQEELSLAALCGNHQIELLAEHLRLAQVACGEITGEFTADDLLGVIFSRFCIGK"
     gene            1588..1743
                     /locus_tag="WJJ54_001290"
     CDS             1588..1743
                     /locus_tag="WJJ54_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342158.1"
                     /translation="MEKRNTYALPLGIGSLLGLFHPAKTAIRPNPADDLKNIGGDFQR
                     AIEKARK"
     gene            1740..2171
                     /locus_tag="WJJ54_001291"
     CDS             1740..2171
                     /locus_tag="WJJ54_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2335 domain-containing protein"
                     /protein_id="HEZ7342159.1"
                     /translation="MTENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGP
                     LPPPSDLAQYNDIISNGADRIMAMAEKEQAVRHETIRQDQTFNRRGQLYGFISVILIL
                     LFAVFLVWSGYPATAASLAGGTVFALAGAFVIGRSRDQGKN"
     gene            2305..6621
                     /gene="app"
                     /locus_tag="WJJ54_001292"
     CDS             2305..6621
                     /gene="app"
                     /locus_tag="WJJ54_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_168458961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion and penetration autotransporter App"
                     /protein_id="HEZ7342160.1"
                     /translation="MKTTDKRTTETHRKAPKTGRIRFSPAYLAICLSFGILPQAWAGH
                     TYFGINYQYYRDFAENKGKFAVGAKDIEVYNKKGELVGKSMTKAPMIDFSVVSRNGVA
                     ALVGDQYIVSVAHNGGYNNVDFGAEGSNPDQHRFSYQIVKRNNYQKDTKHYYHEDYHN
                     PRLNKFVTDAAPVEMTINMNGNTYGNITDYPDRVRIGSGRQYWHKKNGNPQQIFGSYS
                     YRIAGNTHNQVGGSDGHVSLNGDVKKPNNYGPLPTGVSFGDSGSPMFIYDAKKQKWLI
                     NGVLREGNPYQGTHNGYPIVRKAYLTKIQDGDTGASIYDMVGGASYLWEAKELGKSTI
                     SQENNPKFSQMSDIANPSLPKQNKYTPSLDHRKHITFGEYVEGGVGKLTLKSNIDQGA
                     GGLYFEGDFIVSPTQNETWKGAGISISDESTIIWKVNGVANDRLSKIGKGTLHVQAKG
                     ENQGSISVGDGKVILDQQADENNKKQAFSEIGLVSGRGTVQLNADNQFNPDKLYFGFR
                     GGRLDLNGHSLSFHRIQNTDEGAMIVNHNQDKESTVTITGNKDIATTGNNNSLDSKKE
                     IAYNGWFGEKDTTKTNGRLNLVYQPAAEDRTLLLSGGTNLNGNITQTNGKLFFSGRPT
                     PHAYNHLGSGWSKMEGIPQGEIVWDNDWINRTFKAENFHIQGGQAVISRNVAKVEGDW
                     HLSNHAQAVFGVAPHQSHTICTRSDWTGLTNCVEKTITDDKVIASLTKTDISGNVSLA
                     DHAHLNLTGLATLNGNLSANGDTRYTVSHNATQNGDLSLVGNAQATFNQATLNGNTSA
                     SGSASFNLSNNAVQNGSLTLSGNAKANVSHSALNGNVSLADKAVFHFENSRLTGQISG
                     GKDTALHLKDSEWTLPSGTELGNLNLDNATITLNSAYRHDAAGAQTGSVSDTPRRRSR
                     RSRRSLLSVTPPTSVESRFNTLTVNGKLNGQGTFRFMSELFGYRSDKLKLAESSEGTY
                     TLAVNNTGNEPASLEQLTVVEGKDNKPLSENLNFTLQNEHVDAGAWRYQLIRKDGEFR
                     LHNPVKEQELSDKLGKAEAKKQAGKDNAQSLDALIAAGRDAVEKTESVAEPARQAGGE
                     NVGIMQAEEEKKRVQADKDSALAKQREAETRPATTAFPRARRARRDLPQPQPQPQPQP
                     QPQPQRDLISRYANSGLSEFSATLNSVFAVQDELDRVFAEDRRNAVWTSGIRDTKHYR
                     SQDFRAYRQQTDLRQIGMQKNLGSGRVGILFSHNRTENTFDDGIGNSARLAHGAVFGQ
                     YGIGRFDIGISTGAGFSSGSLSDGIGSKIRRRVLHYGIQARYRAGFGGFGIEPHIGAT
                     RYFVQKADYRYENVNIATPGLAFNRYRAGIKADYSFKPAQHISITPYLSLSYTDAASG
                     KVRTRVNTAVLAQDFGKTRSAEWGVNAEIKGFTLSLHAAAAKGPQLEAQHSAGIKLGY
                     RW"
     gene            complement(6730..7452)
                     /locus_tag="WJJ54_001293"
     CDS             complement(6730..7452)
                     /locus_tag="WJJ54_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ7342161.1"
                     /translation="MFPDKYKLSLKENIFLAKKVLVAQIHNLSRFENCQTTLLQTEQI
                     IHGKNVASASLEDIQTILNLKRAYQYVISHISNGEPVDISLLKKINNIVAKDDSLAPG
                     DFRTGSVGVTLLDGSRHAPNPVKEIEVARVLQNIGLQSGSTTEAAVRFMLYCMRQQVF
                     WDGNKRTATLFANGLMMAGGCGILEISEMQMPQFNEKLSAFYRSGDDTDISKFVYQNC
                     ISGIDYFGTDEDIDFPDPPNMG"
BASE COUNT         2093 a         2131 c         1846 g         1646 t
ORIGIN      
        1 gccttgtcct gatttttgtt aatccactat aaaaccgaac ggatcggatt cccgttttta
       61 tgggataacg gaatgttcag ccggacaccg ccccggtgct ttcgatccgt ttattttccg
      121 atacaaaacc tcgaaaaaat cacgccgagc aaatcatctg cggtaaattc ccccgtgatt
      181 tcgccgcacg cgacctgagc caagcgcaaa tgttccgcaa gcagctcgat ttgatggttg
      241 ccgcacaatg ccgccagcga caattcttcc tgcgctgctt tgagtgcgtt gacgtgccgc
      301 gtccgcgcca aaaacagccc ttcgctttcg ccctgccaac cggcctcgcg caacaacgtc
      361 cgtttcagcg cgtccaagcc gtcgccggtt ttcgccgaca acggaatcac cgtatccgca
      421 cccgtttcaa aagccgccgc cgcactcgtg tgcaaatcgg atttgctgtg gatttcgatg
      481 cgtttcaact ccggcggcaa cgcgtccaaa atcgcccgtg tcttttcatt caaaccctcg
      541 cgcggatcga ccaacaccag cgcgacatcg gcttcggata cggctttgcg gctgcgttcg
      601 atgccgatac gctcgaccac gtcgtccgtc tcgcgcaaac ctgccgtatc gacaatatgc
      661 accggcacgc cgtcaatcag gatacgttcc ctgaccgcgt cgcgcgtcgt tccggcaata
      721 tcggtaacaa tcgccacttc gtcgcccgcc aacgcgttca gcaggctgga cttgcccaca
      781 ttcggcgcgc cgaccaatac gacattcaga ccttcgcgca aaatcgcgcc ctgctgcgcg
      841 ttggcaagca catcatccac ggcgcggcgc aagccgtcca gtttgccgcg tgcgtctgcc
      901 gcttcgagaa aatcaatgtc ttcctcggga aaatctaacg tcgcttcgac cagcatccgt
      961 aaggtaatca agtcttcgac cagaccgtgt atccgccgcg aaaaatcgcc cttgagtgag
     1021 cgcaacgcca gacgcgccgc cgaacggctg gatgcgtcaa tcaaatccgc cacgccttcc
     1081 gcctgtgcca agtccagttt gtcgtttaaa aacgcacgtt tggtaaactc gcccggttcg
     1141 gcaaggcgcg cgcccaactc caaacagcgg ttcagcagca tatccatcac caccggcccg
     1201 ccgtgtccct gaagctcgat gacatcttca cccgtaaaac ttgccggtgc ggcaaaaaac
     1261 agcaaaagcc cgctgtcgat tgcctgaccg tccgcgtccg taaaatcagc ataggttgcg
     1321 gtacgcggct tgggcgtttt accgcacaaa gcctgcgcca tcggcagcag gtttttcccc
     1381 gatatgcgta tcacgcccac gccgccgcgt ccgggcgcgg tggcgactgc cgcaatcgtt
     1441 ggaacgttat ccgacataaa acccccgaaa attcaaaaca gccgcgatta tagcaaatgc
     1501 cgtctgaagt ccgacggttc ggctttcaga cggcataaaa ccgcaaaaat gcttgataaa
     1561 cccgtccgcc tgacctaata taaccatatg gaaaaacgaa acacatacgc cctcccgctc
     1621 ggtataggct cgctgctggg tctgttccat cccgcaaaaa ccgccatccg ccccaatccc
     1681 gccgacgatc tcaaaaacat cggcggcgat tttcaacgcg ccatagagaa agcgcgcaaa
     1741 tgaccgaaaa cgcacaggac aaggcgcggc aggctgtcga aaccgtcgtc aaatccccgg
     1801 agcttgtcga gcaaatcctg tccgacgagt acgtgcaaat aatgatagcc cggcgtttcc
     1861 attcgggacc gttgccgccg ccgtccgact tggcgcaata caacgacatt atcagcaacg
     1921 gggcagaccg cattatggca atggcggaaa aagaacaagc cgtccggcac gaaaccatac
     1981 ggcaagacca aaccttcaac aggcgcgggc aactgtacgg cttcatcagc gtcatcctga
     2041 tactgctttt tgccgtcttc ctcgtatgga gcggctaccc cgcaaccgcc gcctcccttg
     2101 ccggtggcac agtgtttgcc ttggcgggtg ctttcgtgat tggaagaagc cgagaccaag
     2161 gcaaaaatta atgacaaatc ctagggcgtg cttcatatcc gcccgaacgc cgaaccgcac
     2221 atataggcac atcccgcgcg ccgcccggaa gcggaagccg cgccctacca aacaaacccg
     2281 aatcccgtca gataaggaaa aataatgaaa acaaccgaca aacggacaac cgaaacacac
     2341 cgcaaagccc cgaaaaccgg tcgcatccgc ttctcgcctg cttacttagc catatgcctg
     2401 tcgttcggca ttcttcccca agcctgggcg ggacacactt atttcggcat caactaccaa
     2461 tactatcgcg actttgccga aaataaaggc aagtttgcag tcggggcgaa agatattgag
     2521 gtttacaaca aaaaagggga gttggtcggc aaatcaatga caaaagcccc gatgattgat
     2581 ttttctgtgg tgtcgcgtaa cggcgtggcg gcattggtgg gcgatcaata tattgtgagc
     2641 gtggcacata acggcggcta taacaacgtt gattttggtg cggagggaag caatcccgat
     2701 cagcaccgct tttcttacca aattgtgaaa agaaataatt atcaaaagga tacaaagcat
     2761 tactatcacg aggattatca taatcctaga ttaaataaat ttgttactga tgccgctcca
     2821 gtagaaatga ccattaatat gaatggtaat acttatggaa atataactga ctatcccgat
     2881 cgtgtgcgta ttggatcagg gcgacaatat tggcataaaa aaaatggtaa ccctcaacaa
     2941 atctttggta gttatagtta ccgaattgct ggtaataccc ataatcaagt gggaggaagt
     3001 gatggacacg ttagtttaaa tggggacgta aaaaaaccaa acaactatgg ccctcttcct
     3061 acgggtgttt catttggaga tagtggttct ccaatgttta tttatgatgc aaaaaaacaa
     3121 aaatggctaa tcaatggtgt attaagagaa ggtaatccat accaaggaac acacaatggc
     3181 tatccaattg tacgtaaagc ctatttaaca aaaatccaag atggagatac tggagcgagt
     3241 atttatgata tggtgggtgg ggcttcttat ctgtgggaag ctaaagaatt aggaaaaagc
     3301 actattagcc aagaaaataa tccaaaattt tctcaaatgt cagatattgc taatcctagc
     3361 ttgcctaagc aaaacaaata taccccatcg ttagatcaca gaaaacacat tacttttgga
     3421 gaatatgttg aaggcggagt tggtaaactt actttgaaat caaatattga tcaaggtgca
     3481 ggcggtttgt attttgaggg agattttata gtttcgccta cccaaaatga aacatggaaa
     3541 ggggcgggta tatctatcag tgatgaaagt accataattt ggaaagtcaa tggcgtggca
     3601 aacgaccgcc tgtccaaaat cggcaaaggc acgctgcacg ttcaagccaa aggggaaaac
     3661 caaggctcga tcagcgtggg cgacggtaaa gttattttag atcaacaagc agatgaaaat
     3721 aataaaaaac aagcctttag tgaaatcggc ttggtcagcg gcagggggac ggtgcaactg
     3781 aatgccgata atcagttcaa ccccgacaaa ctctatttcg gctttcgcgg cggacgtttg
     3841 gatttgaacg ggcattcgct ttcgttccac cgtattcaaa ataccgatga aggggcgatg
     3901 attgtcaacc acaatcaaga caaagaatcc accgttacca ttacaggcaa taaagatatt
     3961 gctacaaccg gcaataacaa cagcttggat agcaaaaaag aaattgccta caacggttgg
     4021 tttggcgaga aagatacgac caaaacgaac gggcggctca accttgttta ccagcccgcc
     4081 gcagaagacc gcaccctgct gctttccggc ggaacaaatt taaacggtaa catcacgcaa
     4141 acaaacggca aactgttttt cagcggcaga ccgacaccgc acgcctacaa tcatttagga
     4201 agcgggtggt caaaaatgga aggtatccca caaggagaaa tcgtgtggga caacgactgg
     4261 atcaaccgca cgtttaaagc ggaaaatttc catattcagg gcgggcaggc ggtgatttcc
     4321 cgcaatgttg ccaaagtgga aggcgattgg catttgagca atcacgccca agcagttttt
     4381 ggtgtcgcac cgcatcaaag ccacacaatc tgtacacgtt cggactggac gggtctgaca
     4441 aattgtgtcg aaaaaaccat taccgacgat aaagtgattg cttcattgac taagaccgac
     4501 atcagcggca atgtcagcct tgccgatcac gctcatttaa atctcacagg gcttgccaca
     4561 ctcaacggca atcttagtgc aaatggcgat acacgttata cagtcagcca caacgccacc
     4621 caaaacggcg accttagcct cgtgggcaat gcccaagcaa catttaatca agccacatta
     4681 aacggaaaca catcggcttc gggcagtgct tcatttaatc taagcaacaa cgccgtacaa
     4741 aacggcagtc tgacgctttc cggcaacgct aaggcaaacg taagccattc cgcactcaac
     4801 ggcaatgtct ccctagccga taaggcagta ttccattttg aaaacagccg ccttaccgga
     4861 caaatcagcg gcggcaagga tacggcatta cacttaaaag acagcgaatg gacgctgccg
     4921 tcaggcacgg aattaggcaa tttaaacctt gacaacgcca ccattacact caattccgcc
     4981 tatcgccacg atgctgcagg cgcgcaaacc ggcagtgtgt cagacacgcc gcgccgccgt
     5041 tcgcgccgtt cgcgccgttc cctattatcc gttacaccgc caacttcggt agaatcccgt
     5101 ttcaacacgc tgacggtaaa cggcaaattg aacggtcagg gaacattccg ctttatgtcg
     5161 gaactcttcg gctaccgaag cgacaaattg aagctggcgg aaagttccga aggcacttac
     5221 accttggctg tcaacaatac cggcaacgaa cctgcaagcc tcgaacaatt gacggtagtg
     5281 gaaggaaaag acaacaaacc gctgtccgaa aaccttaatt tcaccctgca aaacgaacac
     5341 gtcgatgccg gcgcgtggcg ttaccaactc atccgcaaag acggcgagtt ccgcctgcat
     5401 aatccggtca aagaacaaga gctttccgac aaactcggca aggcagaagc caaaaaacag
     5461 gcgggaaaag acaacgcgca aagccttgac gcgctgattg cggccgggcg cgatgccgtc
     5521 gaaaagacag aaagcgttgc cgaaccggcc cggcaggcag gcggggaaaa tgtcggcatt
     5581 atgcaggcgg aggaagagaa aaaacgggtg caggcggata aagacagcgc cttggcgaaa
     5641 cagcgcgaag cggaaacccg gccggctacc accgccttcc cccgcgcccg ccgcgcccgc
     5701 cgggatttgc cgcaaccgca accccaaccg caaccccaac cgcagcccca accgcagcgc
     5761 gacctgatca gccgttatgc caatagcggt ttgagtgaat tttccgccac gctcaacagc
     5821 gttttcgccg tacaagacga attagaccgc gtatttgccg aagaccgccg caacgccgtt
     5881 tggacaagcg gcatccggga caccaaacac taccgttcgc aagatttccg cgcctaccgc
     5941 caacaaaccg acctgcgcca aatcggtatg cagaaaaacc tcggcagcgg gcgcgtcggc
     6001 atcctgtttt cgcacaaccg gaccgaaaac accttcgacg acggcatcgg caactcggca
     6061 cggcttgccc acggcgccgt tttcgggcaa tacggcatcg gcaggttcga catcggcatc
     6121 agcacgggcg cgggttttag cagcggcagt ctttcagacg gcatcggaag caaaatccgc
     6181 cgccgcgtgc tgcattacgg cattcaggca cgataccgcg ccggtttcgg cggattcggc
     6241 atcgaaccgc acatcggcgc aacgcgctat ttcgtccaaa aagcggatta ccgctacgaa
     6301 aacgtcaata tcgccacccc cggccttgca ttcaaccgct accgcgcggg cattaaggca
     6361 gattattcat tcaaaccggc gcaacacatt tccatcacgc cttatttgag cctgtcctat
     6421 accgatgccg cttcgggcaa agtccgaacg cgcgtcaata ccgccgtatt ggctcaggat
     6481 ttcggcaaaa cccgcagtgc ggaatggggc gtaaacgccg aaatcaaagg tttcacgctg
     6541 tccctccacg ctgccgccgc caaaggcccg caactggaag cgcaacacag cgcgggcatc
     6601 aaattaggct accgctggta acaccggata tgccgaaagg ggtttgacga tgccgccgtg
     6661 cgctgtcaaa ccctttttct gccgccgcct tgtgcctgct ccattgtctg ataaccgtca
     6721 aattgatttt tagcccatgt ttggtgggtc ggggaaatct atatcttcgt ccgtgccgaa
     6781 atagtctatg cccgatatac aattttgata cacaaacttg gaaatatcgg tatcgtcgcc
     6841 ggagcgatag aatgcggaca gtttttcatt gaattgcggc atctgcattt cggagatttc
     6901 caagatgccg cagccccccg ccatcatcag accgttggca aataaggttg ccgttcgttt
     6961 gttgccgtcc caaaaaacct gctgccgcat acaataaagc ataaaacgga cggctgcctc
     7021 cgtcgtcgaa ccgctttgca gtccgatatt ttgtaacacg cgggccactt caatttcctt
     7081 cactggattc ggggcatgac gggaaccgtc caatagcgtt acgccgaccg aaccggtacg
     7141 gaaatcaccg ggtgccaaag aatcgtcctt ggcaacaatg ttgttgattt ttttaaggag
     7201 tgaaatatcg accggttcgc cgtttgaaat atgcgaaatc acatattgat aggcacgttt
     7261 caggttcaag atggtttgga tgtcttccag tgacgcggag gctacatttt tgccatggat
     7321 aatttgctca gtctgcaata aggtcgtctg acaattctca aaacggctga ggttgtgaat
     7381 ttgggcaacc aatactttct ttgccaaaaa aatattttct ttcaaactca acttgtattt
     7441 gtcgggaaac acgataattc cttaaataat taaagcagta cgttaaatca tcatcttatc
     7501 atcactttcg gggtttatgt tgcatgcgtc cgttttctaa tacggtttcc catcccgcga
     7561 aacgaggcgg aggcctgtgc aaaaaacctg ttcacgaaat tttccgcatt aacgatacgc
     7621 tgaaaatgcg ctaaaaatga ctgtgtttga atatcggttg atttcatccg tttgtgtaac
     7681 ctcgcgccgg ttttgtcatg attttgcatt atagtg
//
LOCUS       DAWKJW010000089         7649 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.089, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000089 DAWKJW010000000
VERSION     DAWKJW010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7649)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7649)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7649
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.089"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(62..146)
                     /locus_tag="WJJ54_001294"
     tRNA            complement(62..146)
                     /locus_tag="WJJ54_001294"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(110..112),aa:Leu,seq:caa)
     gene            423..1076
                     /locus_tag="WJJ54_001295"
     CDS             423..1076
                     /locus_tag="WJJ54_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEZ7342162.1"
                     /translation="MFSVPRSFLPGVFVLAALAACKPQDNSAAQVASSSASASAAENA
                     AKPQTRGTDMRKEDIGGDFTLTDGEGKPFNLSDLKGKVVILSFGFTHCPDVCPTELLT
                     YSDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGGQNLPVIK
                     QQYRVVSAKVNQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL"
     gene            1155..1808
                     /locus_tag="WJJ54_001296"
     CDS             1155..1808
                     /locus_tag="WJJ54_001296"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEZ7342163.1"
                     /translation="MQDNALTIALSKGRIFEETLPLLAAAGIVPTEEPEKSRKLIIGT
                     NHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHGGTGLYRPLDLEIAKCRMMVA
                     VRKGFDYEAASQPGCRLKIATKYPEIAASHFAGKGVHVDIIKLYGSMELAPLVGLSDA
                     IVDLVSTGNTLKANGLEAVEHIVDISSYLVVNKAALKTKYALLEPIIQAFGGAVKAK"
     gene            1912..2811
                     /locus_tag="WJJ54_001297"
     CDS             1912..2811
                     /locus_tag="WJJ54_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HEZ7342164.1"
                     /translation="MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCG
                     NRIFEHEWVASRSQDPVSGEIIDRKLKAISKCKKLGRYIISYHLTEVEALAAESALIH
                     FVKSVLGKKLKNKIAGHGPGGISVEELDRRFGFSSLPLNEINPDGLILAIKIHNAFDL
                     DTDEELDYLFDNQDDANLKSRTLGNWVIGKDVASKVKYVIGVHTGLQNAVVSAYEVDG
                     FETMVEETKNGRKQSRYRFRTTSRSEEVLAKLGLQQKCLPELKFGSGGEKAYIRPKTE
                     TETEQENIQTTPNPKIKKEKTKS"
     gene            2808..4097
                     /gene="hisD"
                     /locus_tag="WJJ54_001298"
     CDS             2808..4097
                     /gene="hisD"
                     /locus_tag="WJJ54_001298"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEZ7342165.1"
                     /translation="MKKLNTQSPDFQAGLKALLAFETAQNPETERIVADICADVQKRG
                     DAALIEYTNKFDQTNAKSIDDLILTQADLKAAFERIPNDVQTALQTAARRVESYHQRQ
                     KMESWSYTDEDGTLLGQQITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMV
                     VPTPKGERNDIVLAAAYVAGVTKVFTVGGAQAVAALAYGTETIPQVDKITGPGNAFVA
                     AAKRRVFGVVGIDMVAGPSEILVIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQA
                     YLDEVEAAMDRLIETMPRRDIIEASLGNRGAMILAKDLDEACEIANYISPEHLELSVE
                     NPQEWAKKIRHAGAIFMGRYTGESLGDYCAGPNHVLPTSRTARFSSPLGTYDFQKRSS
                     LIQVSEQGAQKLGETASVLAHGESLTAHARAAEFRMK"
     gene            4143..5240
                     /locus_tag="WJJ54_001299"
     CDS             4143..5240
                     /locus_tag="WJJ54_001299"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEZ7342166.1"
                     /translation="MKSVRSFIRDDIQAMSAYQIADVPPGFAKLDSMESPVHPFAGHE
                     TLLQEWQARLAAAPIHLYPNPSGSGLQEALRSAFDIPDCADIALGNGSDELIQFITML
                     TAKPGAAMLAAEPSFVMYRHNAALYGMDYVGVPLNGDFTLNLPAVLEAVRKHRPALTF
                     IAYPNNPTGVCFTRAEIEAVIEASDGIVVVDEAYGAFNGDSFLPQAGSIPNLIVMRTV
                     SKIGFAGLRIGYAAGCPEVIGELQKILPPYNMNQLSLTTAKLALQHYGIISANIDSLK
                     NERERMFAELGKICRLNTFPSQANFITIRVPDADLLFDTLKQNRILVKKLHGAHPLLE
                     HCLRITVGSPAQNDAVLNIIRQLYCQPTDFL"
     gene            5237..6154
                     /gene="hisB"
                     /locus_tag="WJJ54_001300"
     CDS             5237..6154
                     /gene="hisB"
                     /locus_tag="WJJ54_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEZ7342167.1"
                     /translation="MNLTKTQRQLHNFLTLAQEAGSLSKLAKLCGYRTPVALYKLKQR
                     LEKQAEDPDARGIRPSLMAKLEKHTGKPKGWLDRKHRERTVPETAAESTGTAETQIAE
                     TASAAGCRSVTVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDID
                     ISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLS
                     GRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFK
                     AFGRALRMAVEHDPRMAGQTPSTKGTLTA"
     gene            6249..7118
                     /locus_tag="WJJ54_001301"
     CDS             6249..7118
                     /locus_tag="WJJ54_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEZ7342168.1"
                     /translation="MSANEYAQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAP
                     ISAKGAKVYGNTAELVRDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTE
                     NLAVKALVEAAGGQFAEAPVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTF
                     HFGDVGKGSGAKLVLNSLLGIFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQ
                     TKKSLWANREFPPAFALKHASKDLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGE
                     QDVSGVYLKLAEH"
     gene            7243..7605
                     /locus_tag="WJJ54_001302"
     CDS             7243..7605
                     /locus_tag="WJJ54_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEZ7342169.1"
                     /translation="MNRLDQLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSR
                     TQKHIGEEWSLPKQTVSGVCKTLAGQGLIEWQESEQDRRERLLSLTEKGKAHAAPLTE
                     SAQEFSDKETFAKSPKIP"
BASE COUNT         2022 a         2240 c         1817 g         1570 t
ORIGIN      
        1 gttttatcta tttcattaaa cagcaataga caaaaaaaaa taaccgctct aaaagcggtt
       61 gtggtgccca gggtcggact cgaaccgaca caccttgcgg cgggggattt tgagtcccct
      121 gcgtctacca atttcgccac ctgggctggt gaagaagtcg tcattataat ggcttttgaa
      181 attctgtaaa cctttttttt gaaattattt tatctgtttt tattttattt ttgattttaa
      241 atagaatttt tattatttta atcttactgt tctttccgct ccaaagattc tgtatgattc
      301 ggcaattcct gccgtgcaga caacgtaaaa aaatactaca ttaaatctgc caaacgcgtt
      361 aagatggaaa tattcaaatt ccgtacgaat caggttttgc tatttattct tgggagattg
      421 tcatgttttc cgtaccgcgt tcctttttgc cgggcgtttt cgtacttgcc gcgcttgccg
      481 cctgcaaacc tcaagacaac agtgcggcgc aagtcgcttc ttcaagtgca tccgcgtcgg
      541 ctgcggaaaa tgcggcaaag ccgcaaacgc gcggtacgga tatgcgtaag gaagacatcg
      601 gcggcgattt cacgctgacc gacggcgaag gcaagccttt caacctgagc gatttgaaag
      661 gcaaggtcgt gattctgtct ttcggcttta cgcactgtcc cgatgtctgc ccgacagagc
      721 ttttgacgta cagcgacacg ttgaagcagt tgggcgggca ggctaaggac gtgaaagtgg
      781 tgttcgtcag catcgatccg gaacgcgaca cgcctgaaat catcggcaag tatgccaaac
      841 agttcaatcc ggactttatc ggtctgacgg caacgggcgg ccaaaacctg ccggtcatca
      901 agcagcaata ccgcgtggtt tctgccaaag tcaatcaaaa agacgacagc gaaaactatt
      961 tggtcgacca ctcttccggt gcgtatctca tcgacaaaaa cggtgaggtt gccattttct
     1021 cgccttacgg aagcgagccg gaaacgattg ctgccgatgt aaggaccctg ctctgataaa
     1081 accgtatgcc gtctgcaccg tcggcgccta ttcagacggc attattgttt caaccgacaa
     1141 aggacatcca caccatgcag gataatgctt tgaccatcgc cttatccaag gggcgcattt
     1201 ttgaggagac gctgccgctg cttgccgctg ccggcattgt tccgactgaa gagcctgaaa
     1261 aatcgcgcaa gctgattatc gggacgaacc atgaaaacat ccgccttgtc attgtccgcg
     1321 caaccgatgt gccgacttat gtccgctacg gcgcggcgga cttcggcatt gcgggcaaag
     1381 acgtgctgat cgaacacggc ggcacggggc tttaccggcc tttggatttg gagattgcca
     1441 agtgccgcat gatggttgct gtgcgtaaag ggtttgatta cgaagcagct tcgcaacccg
     1501 gatgccgtct gaagattgcc acaaagtatc ctgaaatcgc ggcatctcat tttgctggca
     1561 agggtgtcca tgtggacatt atcaaactgt acggctcgat ggaacttgcg ccgctggtcg
     1621 gcttgagcga tgcgattgtg gacttggttt cgacgggcaa caccttgaag gcaaacggct
     1681 tggaagcagt cgaacacatc gtcgacattt ccagctacct ggtggtcaac aaggctgctt
     1741 tgaaaacgaa atacgcgctg ctggagccga ttattcaggc gttcggcggc gcagtgaagg
     1801 cgaagtaagc atccatttga ataaagatgc gttttcagac gaccctatcc gttcccgccg
     1861 acaggtcgtc tgaaaatatc accggcagta aactgtatag gagaagttaa aatggttgca
     1921 aaaataaaaa aattctcaga ttcaaccctt tccgttttga ataacggcga gcgtcggttt
     1981 tatgtctatt gtctgaccga cctgaaaaaa gacaaaatcc tctacatcgg caaaggctgc
     2041 ggtaatcgta tcttcgagca tgaatgggtt gctagtcgtt cacaagatcc agtctccggc
     2101 gagattatcg atcggaaact caaagccatc tccaaatgca agaaactcgg tcgctatatc
     2161 atcagctatc atctgactga agtcgaagca ctcgccgccg aatctgcctt aattcatttt
     2221 gttaaatctg tcttgggtaa aaaactcaaa aataaaattg ccgggcatgg tccgggtggt
     2281 attagcgtag aagaactaga tcgccgcttt ggattctctt ctctcccact taacgagatt
     2341 aaccccgacg ggctgattct cgccatcaaa atccacaatg ctttcgattt agatactgac
     2401 gaagaattag actacctttt cgacaaccaa gacgatgcca acctcaaatc gcgtacgttg
     2461 ggcaactggg ttatcggtaa agatgttgct tcaaaagtga aatacgttat cggcgttcac
     2521 accggtctgc aaaacgctgt tgtcagtgca tacgaagtgg acggttttga aacaatggtt
     2581 gaggaaacca aaaacggtag aaaacaatcc cgttaccgtt tccgcactac ctctcgtagc
     2641 gaagaggtat tagccaaact cggtctgcaa caaaaatgcc tgcccgaatt gaagtttggt
     2701 agcgggggag aaaaagcgta tatcagaccc aaaacagaga cagaaactga acaagagaat
     2761 attcagacga cccccaatcc aaaaataaaa aaggaaaaaa ccaaatcatg aaaaaactca
     2821 acacccaatc gcccgatttc caagccggac tcaaagccct gctggctttt gaaaccgcgc
     2881 aaaaccccga aaccgaacgc atcgtcgccg acatttgcgc cgacgtgcaa aagcgcggcg
     2941 atgcggcttt gattgaatac accaacaaat tcgatcagac aaacgctaaa agcatcgatg
     3001 atttaatact cacgcaagcc gatttgaaag cggcgttcga gcgcattccg aacgacgttc
     3061 agacggcatt gcagaccgcc gcccgccgtg tcgaaagcta ccaccaacgc caaaaaatgg
     3121 aatcgtggag ctacaccgat gaagacggca cgctgttggg acaacaaatc acaccgcttg
     3181 accgcgtcgg catttacgtc cccggcggca aggcggcgta tccgagttcc gtcatcatga
     3241 acgccatgcc cgcccacgtc gcaggtgtga aagaaatcat catggtcgtg ccgacaccaa
     3301 aaggcgaacg caacgacatc gtacttgccg ccgcatacgt cgccggcgta accaaagtct
     3361 tcaccgtcgg cggtgcgcag gcggttgccg ccctcgccta cggcacggaa accatccccc
     3421 aagtcgataa aatcaccggt ccgggcaacg ccttcgtcgc cgccgccaaa cgccgcgtgt
     3481 tcggcgtggt cggcatcgac atggtggcgg ggccgtctga aatcctggtc atcgccgacg
     3541 gcacgacacc tgccgattgg gtggcgatgg atttgttcag ccaggccgaa cacgacgaaa
     3601 ttgcccaagc catcctcatc ggcacgtcgc aagcgtatct cgacgaagta gaagccgcta
     3661 tggacaggct catcgaaacc atgccgcgcc gcgacatcat cgaagcctcg ctcggcaaca
     3721 ggggcgcgat gatactcgcc aaagacttgg acgaagcctg cgaaatcgcc aactacattt
     3781 cccccgaaca cttggaactg tcagtcgaaa atccgcagga atgggcgaaa aaaatccgcc
     3841 acgccggtgc gattttcatg ggacgctaca ccggcgaaag cctcggcgac tactgcgccg
     3901 gtccaaacca tgtattgccc accagccgaa ccgcccgctt ttcctcgcct ttggggacat
     3961 atgatttcca aaaacgctcc agcctgattc aggtttcgga acagggcgcg caaaaattag
     4021 gcgaaaccgc cagcgtgctg gcacacggcg aaagcctgac cgcccacgcc cgcgcggcag
     4081 agttccgtat gaaataatgc cgaaacggcg tacaggcata ttccaaccat taaggaaaca
     4141 cgatgaaatc cgtccgctcc ttcatccgcg acgacataca agctatgtcg gcatatcaga
     4201 ttgccgacgt tccgcccggc tttgccaaac tcgattcgat ggaaagtccc gtccaccctt
     4261 ttgccggaca tgaaacgctg ttgcaggaat ggcaggcacg gcttgccgcc gcgcccatcc
     4321 atctttaccc caatccctcc ggcagcggtt tacaggaagc attacgttcg gcgttcgaca
     4381 ttcccgactg cgccgacatc gcgctgggca acggctcgga cgagctgata cagttcatca
     4441 cgatgctgac cgccaaaccg ggcgcggcaa tgttggcagc cgaacccagt ttcgtcatgt
     4501 accgccacaa cgccgcgctg tacggcatgg attatgtcgg cgttccactg aacggagatt
     4561 tcaccctcaa cctgcccgcc gtcctcgaag ccgtcaggaa gcaccgccct gccctgacct
     4621 ttatcgccta ccccaacaac cccaccggcg tatgtttcac gcgtgccgaa atcgaagccg
     4681 tcatcgaagc ttcagacggc atcgtcgtcg tcgacgaagc ctacggcgca ttcaacggcg
     4741 acagcttcct gccgcaggcg ggcagcattc ccaacctcat cgtcatgcgt accgtcagca
     4801 aaatcggttt tgccggactg cgtatcggct atgcggcagg ctgtcccgaa gtcatcggcg
     4861 aactgcaaaa aatcctgccg ccctacaata tgaaccaact gagcctgacc accgccaaac
     4921 tcgccctgca acactacggc atcatctctg ccaacatcga cagcctgaaa aacgaacgcg
     4981 aacggatgtt cgccgaattg ggcaaaatat gccgtctgaa cacctttcca agtcaggcaa
     5041 acttcattac catacgcgta cccgatgccg atttgttgtt tgacacgctc aaacaaaacc
     5101 gcatcttggt taaaaaactg catggcgcgc acccgctttt ggaacactgc ctgcgcatta
     5161 ccgtaggcag tcccgcacaa aacgatgccg ttctcaacat cattcgccaa ctttactgcc
     5221 aaccaacgga tttcctatga atttgactaa aacacaacgc caactgcaca actttctgac
     5281 cctcgcccaa gaagcaggtt cactgtccaa gctcgccaaa ctctgcggct accgtacccc
     5341 tgtcgcactc tacaaactca aacaacgcct tgaaaagcag gcagaagacc cagatgcacg
     5401 cggcatccgt cccagcctga tggcaaaact cgaaaaacac accggcaaac ccaaaggctg
     5461 gctcgacaga aaacaccgcg aacgcactgt ccccgaaacc gccgcagaaa gcaccggaac
     5521 tgccgaaacc caaattgccg aaaccgcatc tgctgccggc tgccgcagcg ttaccgtcaa
     5581 ccgcaatacc tgcgaaaccc aaatcaccgt ctccatcaac ctcgacggca gcggcaaaag
     5641 caggctggat accggcgtac ccttcctcga acacatgatc gatcaaatcg cccgccacgg
     5701 catgattgac atcgacatca gctgcaaagg cgacctgcac atcgacgacc accacaccgc
     5761 cgaagacatc ggcatcacac tcggacaagc aatccggcag gcactcggcg acaaaaaagg
     5821 catccgccgt tacggacatt cctacgtccc gctcgacgaa gccctcagcc gcgtcgtcat
     5881 cgacctttcc ggccgccccg gactcgtgta caacatcgaa tttacccgcg cactaatcgg
     5941 acgtttcgat gtcgatttgt ttgaagaatt tttccacggc atcgtcaacc acagtatgat
     6001 gaccctgcac atcgacaacc tcagcggcaa aaacgcccac catcaggcgg aaaccgtatt
     6061 caaagccttc gggcgcgccc tgcgtatggc agtcgaacac gacccgcgca tggcaggaca
     6121 gaccccctcg accaaaggca cgctgaccgc ataaaaaacc ataccgtctg aaacacccgc
     6181 aggcttttca gacggtatcg gaacagataa gattacacta cactacaaac agaaaaggag
     6241 taaacatcat gtccgcaaac gaatacgcac aaatcggctg gataggctta gggcaaatgg
     6301 gtctgcctat ggtaacgcgg ctcttggacg gcggcatcga agtcggcgta tacaaccgct
     6361 ctcccgacaa aactgccccc atctccgcca aaggcgcaaa agtttacggc aacaccgccg
     6421 aactcgtccg cgactatccc gtcattttcc tgatggtttc cgactatgcc gccgtgtgcg
     6481 acatcctgaa cggagtccgc gacggattgg ccggcaaaat catcgtcaac atgagcacca
     6541 tctccccgac cgaaaacctc gccgtcaaag cacttgtcga agccgcaggc ggacagtttg
     6601 ccgaagcacc cgtttccgga tcggtcgggc ccgccaccaa cggcacgctg ctgattctgt
     6661 tcggcggcag cgaagccgtt ttaaacccgc tgcaaaaaat attttccctc gtcggcaaaa
     6721 aaaccttcca tttcggcgat gtcggcaaag gttcgggcgc gaaactcgtc ttgaactcgc
     6781 tcttgggcat tttcggcgaa gcgtacagcg aagcgatgct gatggcgcgg cagttcggca
     6841 tcgataccga caccatcgtc gaagccatcg gcggctcggc aatggactcg cccatgttcc
     6901 aaaccaaaaa atccctgtgg gcaaaccgcg aattcccacc cgccttcgcc ctcaaacacg
     6961 cctccaaaga cctcaacctc gccgtcaaag agcttgaaca ggcaggcaac accctgcccg
     7021 ccgtcgaaac cgttgctgcc agctaccgca aagcagtcga agccggctac ggcgaacagg
     7081 acgtttccgg cgtttacctg aaactggcag aacactgatt gccttttcca aacacaatgc
     7141 cgtctgaaca tatttcagac ggcattttta tcaccccacg cttaaaatca gtcccgatta
     7201 tgactatact ccgcgcaaat ttagtcaata tcaagaccaa ttatgaaccg actcgaccaa
     7261 cttggcaccc gtatcaacct gatttgcaat gtcttcgaca aatggattgg gcagcaggat
     7321 ctgaattaca acctctttgc cgtactttat accctggcaa ccgaaggcag ccgcacgcaa
     7381 aagcatatcg gcgaagagtg gagtctgccc aaacagaccg tttcaggcgt atgcaaaacc
     7441 cttgccggac aagggttgat tgaatggcag gaaagcgaac aggaccggcg cgaacggttg
     7501 ctgtcgctga ccgaaaaagg caaagcccat gccgcacctt taacagaaag cgcgcaggaa
     7561 ttcagcgaca aagagacctt tgcaaaatcc cccaaaatcc cctaaattcc caccaagaca
     7621 tttaggggat ttctcatgag caccttctt
//
LOCUS       DAWKJW010000090         7623 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.090, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000090 DAWKJW010000000
VERSION     DAWKJW010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7623)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7623)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7623
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.090"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            23..1126
                     /locus_tag="WJJ54_001303"
     CDS             23..1126
                     /locus_tag="WJJ54_001303"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEZ7342170.1"
                     /translation="MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGKGGQTK
                     LLATDLEIQIDTAGPEGGAGDFRITTNAKKFQDILRALPAGALVSLDWDDSRLTLKAG
                     KSRFALQTLPAADFPMMNVGEDISATFSLEQERFKTMLSQVQYSMAVQDIRYYLNGLL
                     MQVEGSQLRLVATDGHRLAYAACAIDADLPRAEVILPRKTVLELFKLLNNPDDPIQIE
                     LLDKQVRFQCNGTTIVSKVIDGKFPHFNRVIPLDNDKIFVLSRAELLGALERVSILAN
                     EKFRGARLFLQPGLLSVVCSNNEQEEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHS
                     DDMQLAFGDANRSTLFTVPNNPNFKYIVMPMRI"
     gene            complement(1095..1364)
                     /locus_tag="WJJ54_001304"
     CDS             complement(1095..1364)
                     /locus_tag="WJJ54_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342171.1"
                     /translation="MPSETFPFQTAWFYSNLNRADRSQKHTFAIPAQALPLYAPNPNP
                     PHSRRHYLSDSRTKPRIRLHGSGYISNTGIVFRKTVKSASASQYI"
     gene            complement(1389..3446)
                     /gene="ppk1"
                     /locus_tag="WJJ54_001305"
     CDS             complement(1389..3446)
                     /gene="ppk1"
                     /locus_tag="WJJ54_001305"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HEZ7342172.1"
                     /translation="MPEQNRILCRELSLLAFNRRVLAQAEDQNVPLLERLCFLCIVSS
                     NLDEFFEVRMAWLKRENKLHPRRRLDNGKMPSETIADVTEAARSLIRHQYDLFNNVLQ
                     PELAREGIHFYRRRNWTDTQKKWIEDYFDRELLPILTPIGLDPSHPFPRPLNKSLNFA
                     VELDGTDAFGRPSGMAIVQAPRILPRVVPLPSELCGGGHGFVFLSSILHAHVGKLFPG
                     MNVKGCHQFRLTRDSDLTVDEEDVQNLRAAIQNELHDREYGDGVRLEVADTCPAYIRD
                     FLLAQFKLTAAELYQVKGPVNLVRLNAVPDLVDRPDLKFPPHTQGRLKALGKNGSIFK
                     LIRRAPILLHHPYQSFNPVVEMMREAAADPAVLAVKMTIYRTGTRSELVRALMKAALA
                     GKQVTVVVELMARFDEANNVNWAKQLEEAGAHVVYGVFGYKVHAKMALVIRREDGVLK
                     RYAHLGTGNYHQGTSRIYTDFGIITADEQITADVNTLFMEITGLGKPGRLNKLYQSPF
                     TLHKMVIDRIARETEHAKAGKPARITAKMNSLIEPTVIEALYRASAAGVQIDLIVRGM
                     CTLRPGVKGLSENIRVRSIIGRQLEHARVYCFHNNGADDTFISSADWMGRNFFRRIET
                     AAPITAPELKKRVIREGLEMALADNTHAWLMQPDGGYIRAAPAEGESEADLQNDLWTL
                     LGG"
     gene            complement(3615..4058)
                     /locus_tag="WJJ54_001306"
     CDS             complement(3615..4058)
                     /locus_tag="WJJ54_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HEZ7342173.1"
                     /translation="MPLRLLLGILCDLSMVAPVYAQGQPDAVNAYIQKKKVIVDTSKA
                     ELCFADDRQCHPVLIGVATPKGTFGLTLNSTDKPGYGGEVIGFKQEGDFLFALHRVWN
                     QIPSERRNERIASPSVSDRIMTNGCINVSDAVYEKLRHYFVLEVI"
     gene            complement(4065..4580)
                     /locus_tag="WJJ54_001307"
     CDS             complement(4065..4580)
                     /locus_tag="WJJ54_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEZ7342174.1"
                     /translation="MKIKQIVKPGLAVLAAGVLSACATKSNVKADGTTDNPVFPKPYS
                     VTLDNNRGTFPTYDELDLMRPGLTKDDIYKILGRPHYDEGMYGVREWDYLFHFHTPGV
                     GIDPENTSGVEGITTCQYKIIFDKDKFARSFYWNPVFPKDAACPPPAPKAEPQVIIRE
                     IVPAKPKRIRQ"
     gene            4847..7477
                     /locus_tag="WJJ54_001308"
     CDS             4847..7477
                     /locus_tag="WJJ54_001308"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEZ7342175.1"
                     /translation="MQEHYQPAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYP
                     SGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY
                     DNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDP
                     VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKT
                     MQRNWIGKSRGMTVRFAVSDDSKQGLEGDYAKFLQVYTTRPDTLMGATYVAVAAEHPL
                     ATAAAADKPELQAFIAECKAGSVAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANY
                     VLWGYGDGAVMAVPAHDERDFEFAAKYNLPKKQVIAVGDNAFDANRWQEWYGDKENGV
                     LVNSGDLNGLDFQTAFDAVAAKLQSQGAGEPKTQYRLRDWGISRQRYWGCPIPIVHCE
                     QCGDVPVPADQLPVVLPENVVPDGMGSPLAKMPEFYETACPCCGGAAKRETDTMDTFM
                     ESSWYFFRYMSPKFSDGMVDPAAAKYWGAVDQYIGGIEHAILHLLYARFFTKLMRDEG
                     LVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINPADVELTFDDKGRPVSAVLKVDG
                     LPVVISGTEKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAH
                     RFLRRLWRTVYEYLKQGEAVNAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQF
                     NTVIAAVMELLNQYDKTDTGGEQGRAVAQEVLETAVRLLWPIVPHICETLWSELNGAK
                     LWEAGWPTVDEAALVKSEIEVMVQVNGKLRGKITVAADASKADLEAAALATEGAVKFM
                     EGKPAKKIIVVPGRLVNIVV"
BASE COUNT         1695 a         2062 c         2223 g         1643 t
ORIGIN      
        1 aaaccgattt aaaggagcga acatgttgat tttacaagcc gaacgcgaca gcctgctcaa
       61 gccgctgcaa gccgttaccg gcatcgtcga acgccgccac accctgccca tcctgtccaa
      121 cgtcctgatt gagggaaaag gcggtcagac caaactcttg gcaaccgatt tggaaatcca
      181 aatcgacact gcgggtcccg agggcggcgc gggcgacttc cgcatcacca ccaatgccaa
      241 gaaatttcag gatattttac gggcactgcc tgccggtgcg ctggtgtcgc tggattggga
      301 cgacagccgt ctgacgctga aagcgggcaa atcgcgtttt gccctgcaga ccctgcctgc
      361 cgccgatttt ccgatgatga atgtcggcga ggacatcagc gcgactttct cgctggagca
      421 ggagcgtttc aaaaccatgc tgtcgcaagt gcagtacagc atggcggtgc aggacatccg
      481 ctattatctc aacggtctgc tgatgcaggt tgagggcagc cagttgcgcc ttgtggcgac
      541 cgacggacac cgccttgcct atgcagcctg cgcgattgat gcggatttgc cgcgcgccga
      601 agtgattttg ccgcgcaaaa cggtgctgga actgttcaaa ctgttgaaca accccgacga
      661 tccgattcaa atcgagctgc tggacaaaca ggtgcgtttc caatgcaacg gcacgaccat
      721 cgtcagcaag gtcatcgacg gcaaattccc ccatttcaac cgcgtcatcc ctttggacaa
      781 cgacaagatt ttcgttttgt cccgtgccga acttttgggc gcgctggaac gtgtgtccat
      841 tcttgccaac gaaaaattcc gtggcgcgcg cctgttcctg caacccggcc tgttgagcgt
      901 tgtgtgcagc aacaacgagc aggaagaagc gcgcgaagaa atcgaaatcg cctatcaggg
      961 cggcgaactc gaagtcggtt tcaatatcgg ctatctgatg gacgtgttgc gcaacatcca
     1021 ttccgacgat atgcagcttg ccttcggcga tgccaaccgc tcgacgctgt ttaccgtgcc
     1081 gaacaatccg aatttcaaat atattgtgat gccgatgcgg atttgacggt tttccggaac
     1141 acgatgcccg tattggagat ataccccgaa ccgtgcagac ggattcgggg ttttgttcgg
     1201 ctgtcggaaa ggtaatgccg tctggaatgc ggcggattgg ggttgggagc gtatagggga
     1261 agtgcttgtg caggaatggc gaaggtgtgt ttttgactcc ggtccgccct gtttagattg
     1321 ctgtaaaacc atgccgtctg aaacggaaag gtttcagacg gcatggtttt tgattggggc
     1381 ggtgcgggtc agcctccgag cagtgtccac aaatcgtttt gcaggtcggc ttcggattcg
     1441 ccctcggcgg gcgcggcgcg gatatagccg ccgtcgggct gcatcagcca cgcgtgcgta
     1501 ttgtctgcca atgccatttc caaaccttcg cggatgacgc gttttttgag ttcgggcgcg
     1561 gtaatcggcg cggcggtttc gatgcggcgg aagaagttgc gccccatcca atccgcgctg
     1621 gagataaagg tatcgtccgc gccgttgttg tggaagcaat acacgcgcgc gtgttcgagc
     1681 tgcctgccga tgatggagcg gacgcggatg ttttcggaca agccttttac acccgggcgc
     1741 aaggtgcaca taccgcgcac aatcaaatcg atttgtacgc ctgccgcgct tgcccgatac
     1801 agggcttcga tgacggtcgg ttcgatgagc gaattcatct tggcggtaat ccgcgccggt
     1861 ttgccggctt ttgcgtgttc ggtttcgcgt gcgatgcggt cgataaccat tttgtgcagg
     1921 gtaaacgggc tttggtagag tttgttcagc cgcccgggtt tgcccaagcc tgtgatttcc
     1981 ataaacaatg tgttcacatc ggcggtgatt tgttcgtcgg cggtaatgat gccgaagtcg
     2041 gtgtagatgc gcgatgtgcc ttggtggtag ttacccgtgc cgaggtgggc gtaacgcttg
     2101 agtacgccgt cttcgcggcg gatgaccagt gccatcttgg cgtggacttt gtagccgaac
     2161 acgccgtaca cgacgtgcgc gcccgcctct tcgagctgct tcgcccagtt gacgttgttg
     2221 gcttcgtcaa aacgcgccat cagttcgacg acgacggtta cttgtttgcc ggcgagtgcc
     2281 gccttcatca gggcgcggac gagttcggaa cgcgtgccgg tgcggtaaat cgtcattttg
     2341 acggcaagca cggcggggtc ggcggcggct tcgcgcatca tttcgacaac gggattgaag
     2401 gattggtagg ggtggtgcag caggatgggt gcgcggcgta tcagtttgaa tatcgagccg
     2461 tttttaccca aggctttcaa cctgccttgt gtatggggcg gaaattttaa atcaggacgg
     2521 tcaaccaaat cggggacggc gttgaggcgc acgaggttga ccgggccttt gacctgatag
     2581 agttcggcgg cggtcagttt gaattgcgcg agcagaaagt cgcggatgta ggcgggacag
     2641 gtgtcggcga cttcgagccg cacgccgtcg ccgtattcgc ggtcgtgcaa ctcgttttga
     2701 atggcggcgc ggaggttttg tacgtcttct tcgtcaacgg tcaagtcgct gtcgcgcgtg
     2761 aggcggaact ggtggcagcc tttgacgttc atgcccggga agagtttgcc gacgtgggcg
     2821 tggaggatgg acgacaggaa gacgaagccg tgtccgccgc cacacagttc ggacggcagg
     2881 ggaacaacgc gcggcaggat gcgcggtgcc tgcacaatcg ccatccccga aggcctgccg
     2941 aacgcgtccg tgccgtcgag ttcgacggcg aagttgagcg atttgttcag cggtcgcggg
     3001 aaggggtggg acgggtcaag gccaatgggg gtcagaatcg gcaacaactc acggtcaaaa
     3061 tagtcttcaa tccatttttt ctgtgtgtct gtccaattgc ggcggcggta aaaatggatg
     3121 ccttcccgcg ccaactcggg ctgaaggacg ttgttgaaca ggtcgtactg gtgccgtatc
     3181 agggagcgcg ccgcttcggt aacgtcggcg atggtttcag acggcatttt gccgttgtcc
     3241 agcctgcgcc gggggtgcag cttgttttca cgtttgagcc acgccatgcg gacttcgaaa
     3301 aactcgtcga ggttggatga aacgatgcac aggaagcaca ggcgttccaa aagggggacg
     3361 ttttggtctt ccgcctgcgc caacacgcgg cggttgaatg ccagcaagct cagttcgcgg
     3421 cagaggatgc ggttttgttc gggcataagg ttctcccaaa gatggttgtt gttcggtcgg
     3481 agcgggcagg caatgccgtc tgaaggcttg gcggcatctg cgccggtttc agacggcatg
     3541 acgtggcgga cagtctgttt caggcatcgg ggcaatgtga aaacagatac cggcgcgtgc
     3601 ggtatccgtc tgtttcaaat cacttccaac acaaaataat gacgcagttt ttcgtacacc
     3661 gcatcgctga cgttgatgca gccgttggtc ataatcctgt cggacacgga cggggaggcg
     3721 atgcgttcgt tccgcctttc cgacggtatc tgattccaaa cgcggtgcag ggcgaaaaga
     3781 aaatcaccct cctgcttgaa accgatgact tcgccgccgt atccgggctt gtcggtactg
     3841 ttcagcgtca gcccgaacgt ccccttgggc gtggcaacac cgatgaggac ggggtggcac
     3901 tgacggtcgt cagcgaaaca gagttccgct ttggatgtat cgacgatgac ttttttcttt
     3961 tggatatagg cattgaccgc atccggctgc ccctgtgcat atacgggggc aaccatcgat
     4021 aggtcgcaca atatccctaa aagcaggcgc aacggcatag cggcttattg gcggatgcgt
     4081 ttgggtttgg cgggcacgat ttcgcggatg atgacttgcg gctcggcttt gggtgcgggc
     4141 ggcggacagg cggcatcttt cgggaagacg gggttccagt agaagctgcg ggcaaatttg
     4201 tctttatcga aaataatttt gtattgacag gtggtaatgc cttctacgcc ggaagtgttt
     4261 tcagggtcga tgcctacgcc cggggtgtgg aagtggaaca gataatccca ttcgcgcacg
     4321 ccgtacatac cttcgtcgta atgcggacga cccaggattt tgtagatgtc gtctttggtc
     4381 agaccgggac gcatcaagtc caattcgtca taggtcggga atgtaccgcg attgttgtcg
     4441 agcgttacgg aatagggttt cgggaaaacc ggattgtcgg tcgttccgtc ggctttgacg
     4501 ttgcttttgg ttgcgcaggc agacagaacg cccgccgcca atactgccaa gcccggtttg
     4561 acgatttgtt tgattttcat atgcagaatc ctcttttacc cgatgcccgt ctgccttttg
     4621 ttcggaagag ccgcatcagg agagttttaa acatttgatt ttggtttgta atattagcat
     4681 aaaaaacgtg cgtatcagta aacgcggtgt atttgtacgg catacggaat gatgcgcgtg
     4741 cgaatttacg catcctgccg gcaatttgcc gattcgccga catcggcaac ctgttataat
     4801 tcctccttta aattcctaac gttttcaagc gaaaaacaga atgaccatgc aagaacatta
     4861 ccaacccgcc gccatcgagc ctgcggcgca gaaaaaatgg gacgacgccc gtattttcaa
     4921 cgtctccgaa gacgcttcca aacccaaata ttattgcctc tccatgttcc cctatcccag
     4981 cggcaagctg cacatggggc atgtgcgcaa ctacaccatc ggcgatgtat tgagccgctt
     5041 caaactttta aacggcttca acgtcatgca gcctatgggt tgggacgcgt tcggcatgcc
     5101 ggcggaaaac gcggcgatga aaaacaacgt cgcccctgcc gcttggacgt acgataacat
     5161 cgaatacatg aaaacccagc tcaaaagcct gggttttgcg attgactggg cgcgcgaaac
     5221 cgcaacctgc aaacccgaat actaccgctg ggaacaatgg ctgtttacca agctgtttga
     5281 aaaaggcatc gtctatcgca aaaacggcac ggtgaactgg gacccggtcg accaaaccgt
     5341 ccttgccaac gagcaagtca tcgacggacg cggctggcgt tcgggagcgt taatcgaaaa
     5401 acgcgaaatc ccgatgtatt acttcaaaat caccgattac gccgaagagc tgctcaacga
     5461 cttggacaaa ctggaacact ggcctgaaca agtcaaaacc atgcagcgca actggatcgg
     5521 caaatctcgc ggtatgaccg tgcgcttcgc cgtttcagac gacagcaaac aaggcttgga
     5581 aggcgattac gcgaaattcc tgcaagttta caccacccgc cccgacacgc tgatgggcgc
     5641 gacttatgtt gccgttgccg ccgagcatcc gctggcaacc gccgcagccg ccgacaaacc
     5701 cgaattgcag gcatttattg ccgaatgcaa agccggttcg gttgccgaag ctgatatggc
     5761 gacgatggag aaaaaaggcg tgccgaccgg ccgctacgtc gtcaacccgc tcaacggcga
     5821 caagctggaa gtgtggattg ccaactatgt attgtggggc tacggcgacg gcgcggtaat
     5881 ggcggttccg gcgcacgacg aacgcgattt cgagttcgcc gccaaataca atctgcctaa
     5941 aaaacaagtc attgccgtcg gcgacaacgc attcgacgca aaccgatggc aagaatggta
     6001 cggcgacaaa gaaaacggcg tattggtcaa cagcggcgac ttgaacggct tggattttca
     6061 gacggcattc gacgccgtcg ccgccaagct gcaaagccaa ggcgcgggcg aaccgaaaac
     6121 ccaataccgc ctgcgcgact ggggcatttc gcgccaacgc tactggggct gcccgattcc
     6181 catcgtccat tgcgaacaat gcggcgacgt acccgtccct gccgaccaat tgccggtcgt
     6241 tttgcctgaa aacgtcgtac ccgacggcat gggttcgccg ctggcaaaaa tgcccgagtt
     6301 ttacgaaact gcctgcccat gctgcggcgg cgcggcaaaa cgcgaaaccg acaccatgga
     6361 caccttcatg gaatcgagct ggtatttctt ccgctatatg tcgccaaaat tttcagacgg
     6421 catggtcgat cctgccgccg cgaaatactg gggcgcggtc gaccaataca tcggcggcat
     6481 cgaacacgcg attttgcacc tcttgtacgc gcgtttcttc accaaactga tgcgcgacga
     6541 aggtttggtc aatgttgacg aaccgtttga acgcctgctg acgcaaggca tggtcgtttg
     6601 cgaaacctac taccgcgaaa acgacaaagg cggcaaagat tggatcaacc ccgccgatgt
     6661 cgagctgact tttgacgaca aaggccgccc tgtttccgcc gtcctgaaag tcgacggact
     6721 gcccgtcgtc atcagcggca cggaaaaaat gtccaagtcc aaaaacaacg gcgtcgatcc
     6781 gcaagaactg attaacgcct acggcgcaga caccgcccgc ctgttcatga tgttcgccgc
     6841 accgcccgaa cagtccctcg aatggagcga cagcggcgtc gaaggcgcgc accgcttcct
     6901 gcgccgcctg tggcgtaccg tttacgaata cttgaagcaa ggcgaagcag tcaacgcgtt
     6961 cgcaggcagc caagacggtt tgtctaaaga actcaaagac ctgcgccaca aactgcattc
     7021 cactatcgcc aaagtcagcg acgactacgg ccgccgtcag cagttcaaca ccgtcatcgc
     7081 cgccgtgatg gaactgctca accaatacga caaaaccgac accggtggcg aacaaggccg
     7141 cgccgtcgcc caagaagtat tggaaaccgc cgtacgcctg ctgtggccca tcgtgccgca
     7201 catctgcgaa accctgtgga gcgaattgaa cggtgcgaaa ctgtgggaag caggctggcc
     7261 gacagtcgac gaagccgcct tggtcaaatc cgaaatcgaa gtcatggttc aagtcaacgg
     7321 caaactgcgc ggtaaaatca ccgtcgccgc cgacgcatcc aaagccgacc tcgaagccgc
     7381 cgcactcgcc accgaaggcg cggtgaaatt catggaaggc aaaccggcga agaaaatcat
     7441 cgtcgtaccc ggacgcttgg tgaatatcgt cgtctaaacc gctcttaagg tttagccata
     7501 cggataaagg ccgtctgaaa actgggaaac agggtttcag acggcctttt taaggcagat
     7561 tgggttgtcc gcatgacaga cctcaaatat agcggattaa ctttaaacca gtacggcgtt
     7621 gcc
//
LOCUS       DAWKJW010000091         7499 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.091, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000091 DAWKJW010000000
VERSION     DAWKJW010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7499)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7499)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7499
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.091"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(151..2187)
                     /locus_tag="WJJ54_001309"
     CDS             complement(151..2187)
                     /locus_tag="WJJ54_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEZ7342176.1"
                     /translation="MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQ
                     THTGWANTVEPLTGITERVGRIWGVVSHLNSVADTPELRAVYNELMPEITVFFTEIGQ
                     DIELYNRFKTIKNSPEFDTLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGA
                     QLSAKFSQNVLDATDAFGIYFDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPH
                     YLAVIQYADNRELREQIYRAYVTRASELSDGGKFDNTANIDRTLANALQTAKLLGFKN
                     YAELSLATKMADTPEQVLNFLHDLARRAKPYAEKDLAEVKAFARESLNLADLQPWDLG
                     YASEKLREAKYAFSETEVKKYFPVGKVLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYF
                     ELQQNGETIGGVYMDLYAREGKRGGAWMNDYKGRRRFSDGTLQLPTAYLVCNFAPPVG
                     GREARLSHDEILILFHETGHGLHHLLTQVDELGVSGINGVEWDAVELPSQFMENFVWE
                     YNVLAQMSTHEETGEPLPKELFDKMLAAKNFQRGMFLVRQMEFALFDMMIYSEDDEGR
                     LKNWQQVLDSVRKEVAVIQPPEYNRFALSFGHIFAGGYSAGYYSYAWAEVLSADAYAA
                     FEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPSIDALLRHSGFDNAV"
     gene            complement(2275..3147)
                     /locus_tag="WJJ54_001310"
     CDS             complement(2275..3147)
                     /locus_tag="WJJ54_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEZ7342177.1"
                     /translation="MEIWNMLDTWLGAVPIRAEAVESVAVVAALLLARALLLNIHFKR
                     HPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELI
                     MCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
                     FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQ
                     RHLENVQAEKLFITPAARPRVTRVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRV
                     QYRLLNYPAGSETL"
     gene            3417..5807
                     /gene="gyrB"
                     /locus_tag="WJJ54_001311"
     CDS             3417..5807
                     /gene="gyrB"
                     /locus_tag="WJJ54_001311"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEZ7342178.1"
                     /translation="MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMV
                     FEVLDNAIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVL
                     HAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKV
                     VGDSDKKGTTVRFLASTETFGNVEYSFDILAKRIRELSFLNNGVDIELTDERDGKHES
                     FALSGGVAGFVQYMNRKKTPLHEKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNI
                     PQRDGGTHLTALRQVMTRTINSYIEANEVAKKAKVETAGDDMREGLTCVLSVKLPDPK
                     FSSQTKDKLVSSEIGPVVNEVINQALTDFLEENPNEAKIITGKIVDAARAREAARKAR
                     EITRRKGVMDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
                     GKILNVEKARFEKMLASQEVAALITALGAGIGKEEFNAEKLRYHRIIIMTDADVDGAH
                     IRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLKDELEKDQWLLGLALEK
                     AKIVSDGRTIEGAELADTAKQFLLAKTVIEQESRFVDELVLRAMLHASPIDLTSSENA
                     DKAVAELSGLLDEKEVALERIEGHEGHRFIKITRKLHGNVMVSYIEPKFLNSKAYQTL
                     TQTAAALKGMVGEGAKLYKGENGYDADSFETALDILMSVAQKGMSIQRYKGLGEMNPE
                     QLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA"
     gene            5906..7291
                     /locus_tag="WJJ54_001312"
     CDS             5906..7291
                     /locus_tag="WJJ54_001312"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HEZ7342179.1"
                     /translation="MVSIFDIFKIGIGPSSSHTVGPMKAAAAFAAGLDAQAVRIVIDI
                     YGSLALTGYGHGTFDALMLGLEGSLPHDIPLVGIPERLERIRTQHILRLNGQEIRFIP
                     DRDLNILGNQVLPKHPNGLRFTAYASDGIVLKEQVYYSVGGGFVVTEEDFDRQAETEK
                     AVPYPYTSCAELLARCRLNRLDISEVVLANEAALAGCGEAEIRRRAAAVAEVMEGCIK
                     RGLGADGELPGGLNVRRRAPQLAAKLKVLRETEIVNTQLWPMVYAMAVNEENAAGGRV
                     VTAPTNGAAGIIPAVLHYFRKFNPHATQERVENFLLTAGAIGILYKTNASISGADVGC
                     QGEVGVACSMAAGAYAEVIGGTPKQVENAAEMAMEHHLGLTCDPVGGLVQIPCIERNG
                     IAAEKALKLGTLALLEDGTDKKVSLDEVIRTMLQTGRDMKATYKETSLAGLAATLRKK
                     AVPVSVRVVEC"
     gene            complement(7362..7460)
                     /locus_tag="WJJ54_001313"
     CDS             complement(7362..7460)
                     /locus_tag="WJJ54_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="eamA-like transporter family protein"
                     /protein_id="HEZ7342180.1"
                     /translation="MAVVFLDERPNTQEWIGLGLVTAGVLTLALKR"
BASE COUNT         1691 a         2111 c         2131 g         1566 t
ORIGIN      
        1 cgaaagtggg aatctagaac gtaaaatcta aagaaaccgt ttttcccgat aagtttctgc
       61 accgaccggt ctggattccc gcctgcgcgg gaatgacggt gcggatgttt ttctatcgaa
      121 tccgccatat tttttacttc aaccctgccg tcagaccgcg ttgtcgaaac cgctgtggcg
      181 caagagtgcg tctatgctcg gttcgcggcc gcggaaggct ttgaaggatt ctgccgcgct
      241 gcgcgatccg ccgacggcga ggatttcctg ccaaaagcgt ttgcctgtgg cggcgacatc
      301 gtcgctttct tcaaaggcgg cgtatgcgtc cgcgctcaat acttccgccc acgcgtagct
      361 gtaatagcct gcggaatagc cgcctgcgaa gatgtggccg aagctcaagg cgaagcggtt
      421 gtattcgggc ggttggatga cggcgacttc tttgcgcacg ctgtctaaaa cctgttgcca
      481 gtttttcaga cggccttcgt cgtcttcgct gtaaatcatc atatcgaaga gggcgaactc
      541 catctggcgg acgaggaaca ttccgcgttg gaagtttttg gcggcgagca ttttgtcgaa
      601 gagttctttc ggcaggggct cgccggtttc ttcgtgggtg gacatttgcg ccaatacatt
      661 gtattcccaa acgaaatttt ccataaactg gctgggcagt tcgaccgcgt cccattctac
      721 gccgttgata ccggacacgc ccagttcgtc cacttgggta agcaggtggt gcagcccgtg
      781 tccggtttcg tggaagagga tgaggatttc gtcgtggctc aggcgggctt ccctgccgcc
      841 gacgggtggg gcgaagttgc agacgaggta ggcggtgggc agttgcagcg tgccgtctga
      901 aaaacggcgg cgacctttgt agtcgttcat ccacgcgccg ccgcgtttgc cttcgcgggc
      961 gtagaggtcc atatagacgc cgcctatggt ttcgccgttt tgttgcaatt caaaatagcg
     1021 cacgtctttg tgccagacgg ggacggtttt ttcggtaaat ccgatgccgt agagtttttt
     1081 gatttgggcg aacagtccgt ttaatacttt gccgacgggg aagtattttt tgacttcggt
     1141 ttcgctgaac gcgtatttgg cttcgcgcag tttttcgctg gcgtagccca agtcccacgg
     1201 ttgcaaatcg gcgaggttca ggctttcgcg ggcgaaggct ttgacttcgg cgaggtcttt
     1261 ttcggcgtag ggtttggcgc ggcgggcgag gtcgtgcagg aagtttaaaa cttgttcggg
     1321 cgtgtccgcc attttggttg ccagcgacaa ttcggcgtag tttttgaagc cgagcagttt
     1381 ggcggtttgc agggcgtttg cgagcgtgcg gtcgatgttg gcggtgttgt cgaatttgcc
     1441 gccgtctgaa agttcgctgg cgcgggtaac gtaggcgcgg tagatttgtt cgcgcagttc
     1501 gcggttgtcg gcgtattgga tgacggcgag gtagtgcgga atctgcaaac cgattttgta
     1561 gcctgttttg ccttcgcttt gcgcggcagc ggcaaacatg gcgagcgcgt cttcgggaat
     1621 gccggcaagc ggtgcagcat cgtcaaagta aatgccgaac gcgtcggtcg cgtctaggac
     1681 gttttgggag aatttggcgg aaagttgcgc gccttcggtt tgcagttttg ccagttctgc
     1741 ctgctgttcg ggcggcagtt ccgcgccgct gaggacgaaa tcgcgcagat cgtggttgag
     1801 tttggttttt tgcgcggggg agagggtgtc gaactcgggg gagtttttga tggttttgaa
     1861 gcggttgtac agctcgatgt cttgtccgat ttcggtgaag aagacggtga tttcgggcat
     1921 cagttcgtta tagacggcgc gcagttcggg cgtgtcggcg acggagttga ggtgcgacac
     1981 cacgccccaa atcctgccga cgcgttcggt gatgccggtc aggggttcga cagtgtttgc
     2041 ccagccggtg tgcgtttggg ctttgatggc ggcgatttgt tcgcgcgctt cggcgatggc
     2101 ggtttgcagg gcgggtttga tgtcttcggt tttgatttga tcaaaacggg gttcttcgcc
     2161 caaatggagc agtgcgttgt cagtcataag atgggtttcc tttgcgtgtt gtgcttcaga
     2221 cagcatatcg gcaatatgcc gtctgaagcc ggaaatgggg tcggtcgggg aaagttaaag
     2281 tgtttcggag ccggcggggt aatttaacag gcggtattgt acgcgcaaaa attcgtccat
     2341 aaccgcctgt tggatttcca gccgctttga aacgggggag gcgaagcgga cgatgatgcg
     2401 gtatgccttg tcatcgtacg gcacgcgggt aacgcgcggt ctggcggcgg gcgtgataaa
     2461 cagtttttcc gcctgcacgt tttccaaatg ccgttggatg gcggggatgt agggcgcgca
     2521 caagggctcg agtacggctt tcagacggca tacggcttca tccgaatcca aatggatggg
     2581 aacggggatt tcgaccgtat ggatgacata gtcgcccaaa atattgtcgc ggcgcacggg
     2641 gtggctcaac aacaggctgt tggggaaaga aacggtggtt cccgcaagct gtccgaccaa
     2701 ggggttcgga ccgacctgca tcatcagcgt gttcaacagg ttgatgtcga ccacgcgccc
     2761 gcgcaggccg ttgatttcga tatagtcgcc gaccgagtat tgctgggtgg cagaccttaa
     2821 aatactgccc gacagacaca taatcagttc cttcgtcgcc acgacgaccg ccgccgccac
     2881 cgcaaacatc gacaaagcca gcgtttggat ttgcgccgac cagataaatg ccagcgaaaa
     2941 cagcaccaaa agcagcgtta tattgcggct ggcaaccaaa aaccgccgct tgctttcgat
     3001 gccgaaatcc ggatgccgtt tgaagtggat attcaacaga agggcgcgcg ccagcagcaa
     3061 agccgcgacc accgccacgg attcgaccgc ctccgcacgt atcgggacgg caccgagcca
     3121 agtgtccaac atattccata tttccatttc cgcgcccctg tccgaaaagt atagggtgta
     3181 gattttagtg gcaaaaaaac gcttttgcca ctttacggga caatccccga cctgatgccg
     3241 gaggcaaacg taccgtttca tcttttcccg gcggcacact gatgcggata acgctgaatt
     3301 aggcggcaaa atcggctata atacacaatt atatatgtcg tcccgcccgc tttttccaca
     3361 aggtgcggac ttgttttggc ggcatcgcaa aatcttttca aaatccggca aaaaatatga
     3421 ctgaacaaaa acacgaagaa tacggcgccg acagcattca ggtgctcgaa ggcttggaag
     3481 cggtacgcaa acgccccggt atgtacatcg gcgacacgca ggacggcagc ggcctgcacc
     3541 acatggtgtt cgaagtattg gacaacgcca ttgacgaagc actcgccgga cattgcgaca
     3601 aaatcaccgt taccatccac gccgaccatt ccgtcagcgt cgccgacaat gggcgcggta
     3661 tgcccaccgg catccacccg aaagaaggac gctccgccgc cgaagtcatc atgaccgtct
     3721 tgcacgcggg cggtaaattc gacaacaaca gctacaaaat ctccggcggc ctgcacggcg
     3781 tgggcgtgtc cgtcgtcaac gcgctgtccg actgggttac gctgaccatc taccgcgacg
     3841 gcaaagaaca cttcgtccgc ttcgtgcgcg gcgaaaccga agagccgctg aaagttgtcg
     3901 gcgattccga caagaaaggc acgaccgtac gcttcctcgc cagcacggaa actttcggca
     3961 acgtcgaata cagcttcgac atcctcgcca aacgcattcg cgaactttcc ttcctgaaca
     4021 acggcgtgga catcgaattg accgacgaac gcgacggcaa acacgaaagc ttcgcccttt
     4081 ccggcggcgt ggccggtttc gtgcaataca tgaaccgcaa aaaaacgccg ttgcacgaaa
     4141 aaatcttcta tgcgttcggc gagaaagacg gcatgagcgt cgaatgcgcg atgcagtgga
     4201 acgacagcta ccaagaaagc gtgcagtgct tcaccaacaa catccctcag cgcgacggcg
     4261 gtacgcactt gaccgcgttg cgccaagtga tgacacgcac catcaacagc tacatcgaag
     4321 ccaacgaagt cgccaaaaaa gccaaagtgg aaacagcagg cgacgatatg cgcgaaggtt
     4381 tgacctgcgt gttgtccgtc aaactgcccg accccaaatt ctcatcccaa accaaagaca
     4441 aactggtttc cagcgaaatc ggccccgttg tcaacgaagt catcaaccaa gcgctgaccg
     4501 acttccttga agaaaacccg aacgaagcca aaatcatcac cggcaaaatc gtcgatgccg
     4561 cccgcgcgcg cgaagccgcc cgcaaagccc gcgaaatcac ccgccgcaaa ggcgtaatgg
     4621 acggcttggg gctacccggt aaactcgccg actgccaaga aaaagacccc gcattgtcag
     4681 aactttatct ggtcgagggc gattctgcag gcggttccgc catgcagggg cgcgaccgca
     4741 aattccaagc gattttgccg cttaagggca agattttgaa cgtcgaaaaa gcgcgctttg
     4801 aaaaaatgct cgccagtcag gaagtagccg ctttgattac cgcgttgggc gcgggcatcg
     4861 gcaaagaaga attcaatgcc gagaagctgc gctaccaccg catcatcatc atgaccgatg
     4921 ccgacgtgga cggcgcgcac atccgcaccc tgctcctgac cttcttctac cgccaaatgc
     4981 ccgaactggt cgagcgcggc tacatctata tcgcccagcc gcctttgtat aaagcgaaat
     5041 acggcaaaca ggaacgttac ctcaaggacg agttggaaaa agaccaatgg ctgctcggtc
     5101 ttgccttgga aaaagccaaa atcgtttcag acggccgcac catcgaaggc gcagaacttg
     5161 ccgacaccgc caaacaattc ctgttggcaa aaaccgtcat cgaacaggaa agccgcttcg
     5221 tagacgaact cgtcctgcgc gccatgctac acgcgtcgcc cattgatttg acgtcgtctg
     5281 aaaacgccga taaagccgtt gccgaacttt ccggtctgct tgacgaaaaa gaagtcgccc
     5341 tcgaacgcat cgaaggtcat gaaggacacc ggttcatcaa aatcacgcgc aagctgcacg
     5401 gcaacgtcat ggtcagctac atcgaaccca agttcctcaa cagcaaagcc taccaaaccc
     5461 tcacccaaac cgccgccgcg ctcaaaggca tggtcggcga gggtgccaag ctttacaaag
     5521 gcgaaaacgg gtacgacgcg gacagctttg aaaccgcttt ggacatcttg atgagcgttg
     5581 cccaaaaagg tatgtccatc caacgataca aaggcttggg cgagatgaac cccgagcagc
     5641 tgtgggaaac cacgatggat cccgccgtgc gccgtctgtt gaaagtgcgc atcgaagacg
     5701 ccattgccgc cgacgaagta ttcgttaccc tgatgggcga cgaggtcgaa ccgcgccgcg
     5761 cctttatcga aaacaacgcg ctgattgccc aaaatatcga cgcataagtg ccgttttaaa
     5821 aaaggagacg ggcatcgtgc cgcgtctcct tttggtttgt caaacggaag ccataccgtc
     5881 tgaaaccgcc tttcggagca aaaccatggt cagcattttt gatattttca aaatcggtat
     5941 cgggccttcc agttcgcata cggtcggccc gatgaaggca gccgccgcct ttgcggcagg
     6001 tttggatgca caggctgttc gcatcgtcat cgacatttac ggctcgctcg ccctgaccgg
     6061 atacggacac ggtacatttg acgcactgat gctcggtttg gaaggcagcc tgccgcacga
     6121 catcccgctt gtcggcattc ccgaacgcct cgaacgcatc cgcacgcagc acatcctccg
     6181 gctcaacggg caagaaatcc gcttcatccc cgaccgcgac ctgaacatac tcggcaatca
     6241 agtgctgccc aaacacccca acggcctgcg ttttaccgcc tatgcttcag acggcatcgt
     6301 cttgaaagaa caggtttatt attcggtcgg cggcggcttt gtcgttaccg aagaagattt
     6361 tgaccggcag gcggaaacgg aaaaagccgt tccctatccc tataccagtt gcgccgaact
     6421 gcttgcccga tgccgtctga accggctcga catctccgaa gtcgtgttgg caaacgaagc
     6481 cgcgcttgcc ggatgcggcg aagccgaaat ccgccgccgc gccgctgccg ttgccgaggt
     6541 tatggaaggc tgcatcaaac gcggcttggg tgcggacggc gaactgcccg gcggattgaa
     6601 cgtccgccgc cgcgccccgc agcttgccgc caagctcaaa gtcctgcgcg aaaccgaaat
     6661 cgtcaacacc cagctctggc cgatggtgta cgccatggcg gtcaacgaag aaaacgccgc
     6721 cggcggacgc gtcgttaccg caccgaccaa cggcgcggca ggcatcattc ccgccgtatt
     6781 gcactatttc cgcaagttca atccgcacgc cacacaggaa cgcgtcgaaa acttcctgct
     6841 caccgcaggc gcaatcggca tcctctacaa gaccaacgcc tccatttccg gtgcggatgt
     6901 cggctgtcag ggcgaagtcg gcgtagcgtg ttcgatggcg gcgggcgcat acgccgaagt
     6961 catcggcggc acgcccaaac aagtggaaaa cgccgccgaa atggcgatgg aacaccattt
     7021 ggggctgact tgcgaccccg tcggcggact ggtgcaaatc ccctgcatcg agcgcaacgg
     7081 catcgccgcc gaaaaagccc tcaaactcgg cacgctcgcg cttttggaag acggcacgga
     7141 caaaaaagtc tcgctcgacg aagtcatccg aaccatgctg caaaccggcc gggatatgaa
     7201 ggcgacctac aaagaaacct cgcttgccgg actcgccgcc acgctccgga aaaaagccgt
     7261 ccccgtatcc gtgcgcgtgg tcgagtgctg aggatggaca gaaacgaaaa tgccgtctga
     7321 aaacagtttt ttagacggca tttcatttat ttcttgcggc tttaccgttt cagtgccagc
     7381 gtcaacacgc ccgccgtaac cagccccaag cctatccatt cctgcgtgtt cgggcgttcg
     7441 tctaagaaaa ccaccgccat caggaatgca aaccggcgtt gtttgcagca tccggcaag
//
LOCUS       DAWKJW010000092         7471 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.092, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000092 DAWKJW010000000
VERSION     DAWKJW010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7471)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7471)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7471
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.092"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            140..721
                     /locus_tag="WJJ54_001314"
     CDS             140..721
                     /locus_tag="WJJ54_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEZ7342181.1"
                     /translation="MEEKNDYTDAASDNRNGQEIEVGIAGAGDRILAALLNQLFTFLV
                     LLVPFAGLIAFAIKNEGRIGGSEEIFGLLLGMTSFWVGLAGILVYTVVQIYYMSRDGQ
                     SLGKKIMRIRVLKTDGRNPGFVGTVLVREIAWSVLVAIIAAVIGLAVGDNGENAINLL
                     AFLANFVLLFMVKRDRRTLYDILADTVVVKLPK"
     gene            complement(783..1637)
                     /gene="folD"
                     /locus_tag="WJJ54_001315"
     CDS             complement(783..1637)
                     /gene="folD"
                     /locus_tag="WJJ54_001315"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEZ7342182.1"
                     /translation="MSAQLINGKEVSQKRLQAVAEAVAQRQQNNLHTPCLAVVLVGGD
                     PASAVYVRNKKTSCQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLP
                     KHLDSQAVLERISPDKDVDGFHPYNVGRLAVKMPLMRPCTPKGVMTLLEAYGIDPKGK
                     KAVVVGASNIVGRPQALELLLARATVTVCHSATENLTDEVAGADILVVGVGIPNFVKG
                     EWIKPGAVVIDVGINRLDDGSLCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTL
                     HAASLHDA"
     gene            1860..1937
                     /locus_tag="WJJ54_001316"
     tRNA            1860..1937
                     /locus_tag="WJJ54_001316"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1895..1897,aa:Pro,seq:tgg)
     gene            1962..2038
                     /locus_tag="WJJ54_001317"
     tRNA            1962..2038
                     /locus_tag="WJJ54_001317"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1996..1998,aa:Arg,seq:tct)
     gene            2066..2141
                     /locus_tag="WJJ54_001318"
     tRNA            2066..2141
                     /locus_tag="WJJ54_001318"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2099..2101,aa:His,seq:gtg)
     gene            2277..2783
                     /locus_tag="WJJ54_001319"
     CDS             2277..2783
                     /locus_tag="WJJ54_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional heptose 7-phosphate kinase/heptose
                     1-phosphate adenyltransferase"
                     /protein_id="HEZ7342183.1"
                     /translation="MVDAWSVPDFESKICPPEALSERLARLPRPLVFTNGCFDILHRG
                     HVTYLAQARSAGAALVLALNTDASVRRLGKDGDRPINPLENRAAVAAALESVDLVTWF
                     DGDTPAALIEAVKPEILVKGGDWAADKIVGAAETLARGGQVFSIPFLHQTSTTKTLAK
                     IRAAEGGK"
     gene            2780..4558
                     /locus_tag="WJJ54_001320"
     CDS             2780..4558
                     /locus_tag="WJJ54_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/type III pantothenate kinase"
                     /protein_id="HEZ7342184.1"
                     /translation="MTVLKLSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQM
                     PAHIRGLLRQHDGYWRLVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILELAR
                     IAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAA
                     VACRRALSRLGLDVQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVLPKE
                     VENAVSVQSLFQTASRRGNADAAVLLETLLVELDAVLLQYARDGFAPFVAEYQAANRD
                     HGKAVLLLRDGETVFEGTVKGVDGQGVLHLETAEGKQTVVSGEISLRPDNRPVSVPKR
                     RDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAEWAEKADGNVRIVGCA
                     VCGEFKKAQVQEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
                     CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRHAGKRYPFPTTT
                     GNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEALPPAFLAENT
                     VRVADNLVIHGLLNLIAAEGGESEHT"
     gene            4671..5495
                     /locus_tag="WJJ54_001321"
     CDS             4671..5495
                     /locus_tag="WJJ54_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEZ7342185.1"
                     /translation="MKWLFTLLAVLNIAVFGGTVGYKLAVKATGGVPENRAVENTPPA
                     TPAADNAAASVEDTAALLKPGDILTEEQAEQLRLKKEAEQKKLREKKQREEKARREKL
                     AAEKAQAERENGAADALCAAQASLTMDEDDYHRIKGLLGKWSHVASRSVEKRTAKAKP
                     ADKTYRVVLPVSADAENQAAELSAKGFNPIPFDGALSLGVGNSRENAQALQNRLAGAG
                     FGGAHIVEHFAEADRQDDSLSVSRMTVLFTGVNAADADEIRKITSLYGKLNLKSCK"
     gene            complement(6258..7046)
                     /locus_tag="WJJ54_001322"
     CDS             complement(6258..7046)
                     /locus_tag="WJJ54_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEZ7342186.1"
                     /translation="MLTLYGETFPSRLLLGTAAYPTPEILKQSVRIAQPAMITVSLRR
                     TGSGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIG
                     DDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTG
                     LGAVHAYALNVLRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVN
                     MARAFALAVESGRLAFEAEPVEARDKAQASTPTVGQPFWHSAEY"
     gene            complement(7260..7454)
                     /gene="thiS"
                     /locus_tag="WJJ54_001323"
     CDS             complement(7260..7454)
                     /gene="thiS"
                     /locus_tag="WJJ54_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HEZ7342187.1"
                     /translation="MNIILNGEPAELHGTSVADLIAQTAPQKPFAVAVNTVFVPKGAY
                     AETVLNENDKIDIVRPVVGG"
BASE COUNT         1594 a         1925 c         2235 g         1717 t
ORIGIN      
        1 atgtatggcg taaaggaagc gttttaacgc cgtattggga aaatgtaaag ttctttatcg
       61 ggatttcttt aagtattggc gttttcggtg tcgtggcggt agaatcgggg tcagttaaga
      121 acaattatca ggaacggata tggaagaaaa aaacgactac accgacgcgg catccgacaa
      181 ccgcaacggg caggaaattg aagtcggaat tgccggcgca ggcgaccgga tacttgccgc
      241 gctgctgaac caattgttta cctttttggt tttgttggtg ccgtttgccg gactgattgc
      301 tttcgccatc aagaatgaag gcaggattgg cggcagtgag gaaatattcg ggctgctttt
      361 gggcatgact tccttttggg taggactggc gggcattttg gtttataccg tcgttcaaat
      421 ctactatatg agtcgggacg ggcagtcatt gggtaagaag atcatgagaa tcagggtgtt
      481 gaaaaccgac ggccgcaatc cgggttttgt cggcacggtt ttggtacgcg aaatcgcatg
      541 gtcggttttg gttgccatta ttgccgccgt tatcggtctt gcagtaggtg acaacggaga
      601 aaacgccatc aacctgctgg cattccttgc caactttgtc ctgctcttta tggtcaaacg
      661 cgaccgccgc acgctttacg acatactggc ggatacggtt gtcgtcaagc tgcccaaata
      721 aacggacacg gcaaaatgcc gtctgaaagc ctttcagacg gcatttttat cttcagaacc
      781 gctcaagcat cgtgcagtga agccgcgtgc agggtgtttt ccatcaatgt ggcaatcgtc
      841 atcggaccca cgccgccggg aacgggcgta atcatcgccg cccgttcttt tgccgtttca
      901 aattccacgt cgccgcacag gctgccatcg tccaaacggt tgatgcccac atcaataacg
      961 accgcgccag gtttgatcca ttcgcctttg acaaagttcg gaatgcctac gccgaccacc
     1021 aaaatatcgg ctccggcaac ctcgtctgtc agattttcgg ttgcgctgtg gcagaccgtt
     1081 accgttgcgc gcgccagcag cagttccaaa gcctgcgggc ggccgacgat attcgacgcg
     1141 ccgaccacga ccgctttttt ccccttcgga tcaatgccgt aagcttccaa aagcgtcatc
     1201 acgcccttgg gcgtacacgg gcgcatcagc ggcattttga ccgccagcct gccgacattg
     1261 taaggatgga agccgtccac gtccttatcc ggcgaaatac gttccaaaac cgcctggctg
     1321 tcgaggtgct tcggcagcgg tagctgaacc agaataccgt ccacttcgga atcggcattc
     1381 aggcggtcga ccagtgccag cagttcttcc tgcgatgttg attcgggcag ctcgtaagac
     1441 agtgatttga tgccgcattt ttggcaggag gttttcttgt tgcggacata aaccgcgctg
     1501 gcagggtcgc ctccgaccaa aaccacggcc aggcaaggcg tgtgcagatt gttctgttgg
     1561 cgttgcgcca ccgcttcggc aaccgcctgc aggcgttttt gcgaaacttc tttaccattg
     1621 atcagttgtg ccgacatatc cgtccttttg ttaaacaggt agaaaatgct gaaaattatc
     1681 gcattttccg tttgttttta cagcaggatg ccgaaaataa atttgccctg aaataaaata
     1741 cggctgtttg gacggattaa atattttttc aaatcaaaaa actatatttt tcatcttggt
     1801 gtcttgaaaa taaatgttga cgcatctttc cctgagttgt atagttcgct tcttcaagtc
     1861 ggggcgtagc gcagcccggt tagcgcatct gctttgggag cagagggtcg tgagttcgaa
     1921 tcccaccgcc ccgaccaatc aatcagcacg aatcggcatg agcgcccgta gctcaaccgg
     1981 atagagcacc gaccttctaa gtcgggggtt acaggttcga ttcctgtcgg gcgtgccaag
     2041 aatttgattg aaaaccgttt ttatggtggc tgtagctcag ttggtagagc cccggattgt
     2101 gattccggtt gtcgtgggtt cgagccccat cagccacccc agataaaggc ccgtactttt
     2161 cggtacgggt cttttcccgt ttgcgcgtac tgtccgcgcc gccggctttg cctttcgcat
     2221 atgcttctgt atcatgtggg tttttctgtc ttttatggtt tttgtcggag gctttgatgg
     2281 ttgacgcttg gtctgtccct gattttgaat cgaaaatctg tccgcccgag gcattgtccg
     2341 aacggttggc tcggttgccg cgcccgctgg tgtttaccaa cggctgtttc gacatcctcc
     2401 acagggggca cgttacttat ctggcgcagg cgcgttcggc aggggcggcg ttggtgctgg
     2461 cgttgaatac cgatgcttcg gtgcggcgtt tgggcaagga cggcgaccgc ccgattaatc
     2521 ctttggagaa ccgtgccgcc gttgccgccg ctttggaaag tgtggatttg gtaacgtggt
     2581 ttgacgggga tacgccggcg gcgttgattg aggcggtcaa acctgagatt ttggtcaagg
     2641 gcggcgattg ggctgcggat aagattgtcg gtgcggcaga aacgttggcg cgcggcggtc
     2701 aggtgttttc aattccgttt ctgcaccaga cttcgacaac gaagactttg gcaaaaatcc
     2761 gtgcggcaga gggcggaaaa tgacggtttt gaagctttcg cactggcggg tgttggcgga
     2821 gcttgccgac ggtttgccgc aacacgtctc gcaactggcg cgtatggcgg atatgaagcc
     2881 gcagcagctc aacggttttt ggcagcagat gccggcgcac atacgcgggc tgttgcgcca
     2941 acacgacggc tattggcggc tggtgcgccc attggcggtt ttcgatgccg aaggtttgcg
     3001 cgagctgggg gaaaggtcgg gttttcagac ggcattgaag cacgagtgcg cgtccagcaa
     3061 cgacgagata ctggaattgg cgcggattgc gccggacaag gcgcacaaaa ccatatgtgt
     3121 gacccacctg caaagtaagg gcagggggcg gcaggggcgg aagtggtcgc accgtttggg
     3181 cgagtgtctg atgttcagtt ttggctgggt gtttgaccgg ccgcagtatg agttgggttc
     3241 gctgtcgcct gttgcggcag tggcgtgtcg gcgcgccttg tcgcgtttag gtttggatgt
     3301 gcagattaag tggcccaatg atttggttgt cggacgcgac aaattgggcg gcattctgat
     3361 tgaaacggtc aggacgggcg gcaaaacggt tgccgtggtc ggtatcggca tcaattttgt
     3421 cctgcccaag gaagtagaaa atgccgtttc cgtgcaatcg ctgtttcaga cggcatcgcg
     3481 gcggggcaat gccgatgccg ccgtgctgct ggaaacgctg ttggtggaac tggacgcggt
     3541 gttgttgcaa tatgcgcggg acggatttgc gccttttgtg gcggaatatc aggctgccaa
     3601 ccgcgaccac ggcaaggcgg tattgctgtt gcgcgacggc gaaaccgtgt tcgaaggcac
     3661 ggttaaaggc gtggacggac aaggcgtttt gcacttggaa acggcagagg gcaaacagac
     3721 ggtcgtcagc ggcgaaatca gcctgcggcc cgacaacagg ccggtttccg tgccgaagcg
     3781 gcgggattcg gaacgttttc tgctgttgga cggcggcaac agccggctca agtgggcgtg
     3841 ggtggaaaac ggcacgttcg caaccgtcgg tagcgcgccg taccgcgatt tgtcgccttt
     3901 gggcgcggag tgggcggaaa aggcggatgg aaatgtccgc atcgtcggtt gcgccgtgtg
     3961 cggagaattc aaaaaggcac aagtgcagga acagctcgcc cgaaaaatcg agtggctgcc
     4021 gtcttccgca caggctttgg gcatacgcaa ccactaccgc caccccgaag aacacggttc
     4081 cgaccgctgg ttcaacgcct tgggcagccg ccgcttcagc cgcaacgcct gcgtcgtcgt
     4141 cagttgcggc acggcggtaa cggttgacgc gctcaccgat gacggacatt atctcggggg
     4201 aaccatcatg cccggtttcc acctgatgaa agaatcgctc gccgtccgaa ccgccaacct
     4261 caaccggcac gccggtaagc gttatccttt cccgaccaca acgggcaatg ccgtcgccag
     4321 cggcatgatg gatgcggttt gcggctcggt tatgatgatg cacgggcgtt tgaaagaaaa
     4381 aaccggggcg ggcaagcctg tcgatgtcat cattaccggc ggcggcgcgg caaaagttgc
     4441 cgaagccctg ccgcctgcat ttttggcgga aaataccgtg cgcgtggcgg acaacctcgt
     4501 cattcacggg ctgctgaacc tgattgccgc cgaaggcggg gaatcggaac atacttaaaa
     4561 aatacaccct ttttcaacac ggggcggcat ccgtccgaat ccgtccggat tctgccgccc
     4621 gacagactgc cgcccaggcg ggcggggttt caaacattga ggaaattcta atgaaatggc
     4681 tcttcaccct tttggcggta ctcaatattg ccgtattcgg cggcacggtg ggctataaat
     4741 tagccgttaa agcgacgggc ggcgtgccgg aaaaccgggc cgtcgaaaac acgccccccg
     4801 caacgcccgc cgccgacaat gcggcggcat ccgtggagga tacggcggca ctgctcaaac
     4861 cgggcgacat cctgaccgaa gagcaggccg agcagttgcg cttgaaaaag gaagcggaac
     4921 agaaaaaact gagggagaaa aaacagcgtg aagaaaaagc ccgccgcgaa aaactcgccg
     4981 ccgaaaaggc gcaggcggaa cgcgaaaacg gcgcggcgga tgccttatgc gccgcgcagg
     5041 caagcctcac gatggacgaa gatgactacc accgcatcaa aggacttttg ggcaaatggt
     5101 cgcacgttgc cagcaggagc gtcgaaaaac gcaccgccaa agccaaacct gccgacaaaa
     5161 cctaccgcgt cgtcctgccc gtttccgccg atgccgaaaa tcaggcggcg gagctgtctg
     5221 ccaaaggttt caaccccata ccgtttgacg gcgcattgag tttgggtgtc ggcaacagcc
     5281 gggaaaacgc ccaagccctg caaaaccggc ttgccggcgc cggattcggc ggggcgcata
     5341 ttgtcgaaca ctttgccgaa gccgacaggc aggacgattc tttgagcgtg tcgcgtatga
     5401 cggttttgtt taccggcgtg aatgccgccg atgcggacga aattcgtaaa atcacgtccc
     5461 tatacggcaa actgaacctc aagtcttgca aataggcgcg aaagccggac gataaacgcc
     5521 aaacccaccg cgaaggtggg tttggcgttt cggttttgag tatctgatat ataaaaaggg
     5581 aatgtatgtc tcgtatatgc cgactccaag tgtgaaagtg atgatgggga aatatggtgt
     5641 ttaatggttc ggaacggacg gcttccgagt ggttttgatt atacgctaat aataataatt
     5701 atcaataaaa atttaaaaat aaatgcagat tttttgtaat acgatgaaaa ataaacaaat
     5761 taacctgtcc gccgatgttt gtgattcggg tcggcaaact ttcattgtgt cggacaaatc
     5821 ggggtcggca gtcatagctg agggcttcgt gcctgacgga aataaggttg cccgtgtttg
     5881 aacatccgtc cgattgggcg cggacagggt tgtcattcgg gggtgtttga gcgtggattc
     5941 ggggatgcga aagcggtaaa accgttgcgg atgaaggctt acggacggct ttaggtattt
     6001 ttaagtgtat tcaaacaaca acaaaacgct tcttctattg ccgtatttag ggcttgcgcg
     6061 gcagcctgca caccgtggag gccgagtgtt tcgttggttg cggcatcggg acgggcggca
     6121 aggttttccg gccggttttt ccattttttc cgacaaagcc gtgatgccgg ggaatggcgg
     6181 tttgtccgtt tcggaccgcc gccgttttga gccgcgatgc cgtctgaacc gttcagacgg
     6241 catttttgcc gcctttttca atattccgcc gaatgccaaa acggctgtcc gactgtcggc
     6301 gtgctggctt gcgctttgtc gcgtgcttcg accggttcgg cttcaaatgc cagccgtccg
     6361 gattcgacgg cgagtgcgaa ggcgcgtgcc atattgaccg gatcgccgct gcgggaaacg
     6421 gcagtattca aaagcacgcc gtcaaaaccc cattccatca cttgtgccgc ctgtgagggc
     6481 aaacccaagc ccgcgtcgat aatcagcggc gtgtcgggca ggcgttcgcg caggacgttc
     6541 aacgcgtagg cgtgaaccgc gcccaaaccc gtgccgatcg gagccgccca cggcattaac
     6601 gcctgacagc ccgcgtcgag caggcggcgg caggcaatca ggtcttcggt gcaataaggc
     6661 agcactttga agccgtcttt aatcaggatt tccgccgctt cgacaagttg gaacacatcc
     6721 ggctgcaagg tgtcgtcgtc gccgatgagt tcgagtttaa tccaatcggt ttcaaacact
     6781 tcgcgcgcca tttgcgccgt cgttaccgct tcctgcacgc tttggcagcc tgccgtgttc
     6841 ggcaggacgg gaacgccggt ttcttgaagc agcgaccaaa acccctgacc gtgcgcctcg
     6901 ccgccgcttc ccgtgcggcg cagcgagacg gtaatcatcg cgggttgggc gatacggacg
     6961 gattgtttga ggatttcagg ggtcgggtag gcagccgtgc cgagcagcag ccgcgagggg
     7021 aaagtttctc cgtatagggt gagcataatg ggttcctttg tatagtggat taacaaaaac
     7081 cagtacggcg ttgcctcgcc ttagctcaaa gaaaacgatt ctctaaggtg ctgaagcact
     7141 aagtgaatcg gttccgtact atccgtactg tctgcggctt cgtcgccttg tcctgattta
     7201 aagttaatcc accataacgt tgttttgggg acaggggtcg tctgaaaagg caaaaccgcc
     7261 tagccgccga ccaccggccg cacgatatcg attttgtcgt tttcgtttaa aaccgtttcc
     7321 gcatacgcgc ctttggggac gaaaacggtg ttgaccgcca cggcaaaggg cttttgcggc
     7381 gcggtttggg cgatgaggtc ggcaacgctt gtgccgtgaa gttcggcggg ttcgccgttt
     7441 aagatgatgt tcatggtttc tcgatgtttc t
//
LOCUS       DAWKJW010000093         7391 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.093, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000093 DAWKJW010000000
VERSION     DAWKJW010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7391
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.093"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..479)
                     /locus_tag="WJJ54_001324"
     CDS             complement(<1..479)
                     /locus_tag="WJJ54_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEZ7342188.1"
                     /translation="MIASRLFGNISSAIQEHKDGKVNINRFQNILADLYSLGGLGSTL
                     IEKNGNMQSWGIPLAIAGDIIAATAIATGDTGTISTEEFYNFDNWKGFGYELFEDWSR
                     WVYDWLPDGWNLWKELDRNRSGQYHIYDPLALDLDGDGIETVAAKGFSGSLFDHTNNG
                     "
     gene            complement(537..710)
                     /locus_tag="WJJ54_001325"
                     /pseudo
     CDS             complement(537..710)
                     /locus_tag="WJJ54_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258767.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
     gene            complement(697..1416)
                     /locus_tag="WJJ54_001326"
     CDS             complement(697..1416)
                     /locus_tag="WJJ54_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342189.1"
                     /translation="MKNKNYLLVFIVLHIALIVINIVFGYFVFLFDFFAFLFFANVFL
                     AVNLLFLEKNIKNKLLFLLPISIIIWMVIHISMINIKFYKFEHQIKEQNISSITGVIK
                     PHDSYNYVYDSNGYAKLKDNHRYGRVIRETPYIDVVASDVKNKSIRLSLVCGIHSYAP
                     CANFIKFAKKPVKIYFYNQPQGDFIDNVIFEINDGNKSLYLLDKYKTFFLIENSVCIV
                     LIILYLKFNLLLYRTYFNELE"
     gene            complement(1692..2126)
                     /locus_tag="WJJ54_001327"
     CDS             complement(1692..2126)
                     /locus_tag="WJJ54_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342190.1"
                     /translation="MDNKKEFINNLTNRYMWIYPLVLNILFLPFYQSYQSFFIALGCL
                     FALVRKMQSLDFKLQNHIVLLNIKSAWADKKVFLIRIVVSWLAVMEIWMCFISESSTW
                     VCGAFCLNSEILEKIFRGFGYSGSLYFLFILMIDLNKLRESI"
     gene            2463..3152
                     /locus_tag="WJJ54_001328"
                     /pseudo
     CDS             2463..3152
                     /locus_tag="WJJ54_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(3286..3801)
                     /locus_tag="WJJ54_001329"
     CDS             complement(3286..3801)
                     /locus_tag="WJJ54_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342191.1"
                     /translation="MSAFRKILLIISCLLIASCSFVETIFYMAISPEPVVVDFPLGKK
                     TKRSIELKQKIGKPYAISLGTNFIHYDPKQGERWIDDKLNYPYNISVKIFKVEEDGKK
                     LIIDELLTERSRKLGGGVFGAGGKYSMYIYDFYLPEGEYLFEISDNSEYIPLYDEINN
                     SIRIVVNARIQ"
     gene            complement(4062..4619)
                     /locus_tag="WJJ54_001330"
     CDS             complement(4062..4619)
                     /locus_tag="WJJ54_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FrpA"
                     /protein_id="HEZ7342192.1"
                     /translation="MENNKAKSDDNSVSIEFIQDFITASTDVINLSYENFRKNFYTQM
                     STDSTNYAAKHESLGKSVQRELQKTQSQLRQVVRKMQSKYNINNKARAAEISLLRQMQ
                     SQFSRKDVNKNLGNGNTLAQQGSYTKKDGTTAQAGDLLLAADNLHSRLTDKMLSISHV
                     RENTISPFVLGCLKQITINAYHYLK"
     gene            complement(5157..5441)
                     /locus_tag="WJJ54_001331"
     CDS             complement(5157..5441)
                     /locus_tag="WJJ54_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342193.1"
                     /translation="MKLALKRSGKYNVYDPLALDLDGDGIETVATKGFSGSLFDHTNN
                     GIRTATGWIAAYDGFSVRKLNSNGGIISTTDTIFQSLHTWLDHQPNDTCH"
     gene            complement(5438..5731)
                     /locus_tag="WJJ54_001332"
     CDS             complement(5438..5731)
                     /locus_tag="WJJ54_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated frpA domain protein"
                     /protein_id="HEZ7342194.1"
                     /translation="MNIDDFTPSKIANFFADPDTYSNVLEEVSRFIYSLVPDDANPWK
                     GGEDYIGRGISEWGELLEKWYKQDFLPYLEKNGTNFRNLKIGCLNSLNGQESG"
     gene            complement(5907..6128)
                     /locus_tag="WJJ54_001333"
     CDS             complement(5907..6128)
                     /locus_tag="WJJ54_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated frpA domain protein"
                     /protein_id="HEZ7342195.1"
                     /translation="MTYANFNINGFGDVKLTPYSPLLGYKAWDSFIGSIQSLSDLIYN
                     VDNNRNKMEITVNNAIQAADSFLSSNWKR"
     gene            7106..7357
                     /locus_tag="WJJ54_001334"
     CDS             7106..7357
                     /locus_tag="WJJ54_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin B"
                     /protein_id="HEZ7342196.1"
                     /translation="MYIPLPTVIAIQSNIMAIVSTPHPALSALIILAHYHGIAAKSLG
                     LKAKVVRQPVKRLAMVTLPALVWCDDGNHFKEKWLFSAF"
BASE COUNT         2458 a         1377 c         1079 g         2477 t
ORIGIN      
        1 ccgttgttgg tgtgatcaaa taagctgcct gaaaagcctt tggcagcgac agtttctatg
       61 ccgtctccgt ccaaatctag ggcgaggggg tcgtagatgt ggtattggcc tgaacggttt
      121 ctgtccaatt ctttccacag attccagccg tcgggcagcc agtcgtatac ccaacgagac
      181 cagtcttcaa atagctcata cccaaaacct ttccagttgt caaaattata aaattcctct
      241 gtagatatcg taccagtatc tcctgtggca atagccgttg ctgcaattat atctccagca
      301 attgctaatg gaatccccca actctgcata tttccattct tctctattaa tgtacttcct
      361 aaccctccca atgaatataa atccgctaaa atattttgaa aacggttgat attaacttta
      421 ccatctttat gctcctgaat agctgaagat atatttccaa agagacggct tgcaatcaca
      481 gaggcatttg ttccgtttac aatatgcgat gacgtactac ctggtgcaat attactagcc
      541 aaattaccaa atgctaataa tgcactataa ccagcttgtt tgtaatattc attacgtttc
      601 gagatatctt tctcattttt tgcagaaact aaattagcaa ccatatttcc aaattctgct
      661 aacgcggatg agcgtgcgct cataaaatta ccaaaactat tccaactcat tgaagtaagt
      721 cctatataaa agcaaattaa attttaaata taaaataatt aatacgatac aaacactgtt
      781 ttcaataaga aaaaatgttt tatacttatc taacaagtac aaacttttgt ttccatcatt
      841 aatttcaaat attacattat ctataaaatc tccttgaggt tgattataaa aataaatttt
      901 aacaggtttt tttgcaaatt ttataaaatt ggcacatgga gcatatgaat gaataccaca
      961 aaccaagctt aatcttatgg atttattttt aacatcagat gcaactacat caatataagg
     1021 tgtttctcta attaccctac catatctatg attatctttt aatttagcat atccatttga
     1081 gtcataaaca taattataac tatcatgtgg ttttatcacc ccagtaatcg aggatatatt
     1141 ttgttccttt atttgatgct caaatttata aaattttata tttatcatac taatatgaat
     1201 taccatccat ataataatag aaatcggcaa caaaaacaat aatttgtttt ttatgttttt
     1261 ttctaaaaat aataaattta cagcaagaaa gacgtttgca aaaaacaaaa acgcaaaaaa
     1321 atcaaataga aaaacaaaat aaccaaacac tatattaatt actatcaagg ctatatgtaa
     1381 aactataaat actagtaaat aatttttatt tttcatatgt ctcattaaat aaaatatagc
     1441 tggtatgatt tagtgaatat caatttagtg gcatagagtg tatactcatc gtattcactc
     1501 tctcagtctt caggctgcct gaaaagcctt tggcggtgac tgtttctatg ccgtcgccgt
     1561 ccaagtctag ggcgagggga tcgtagacgt ggtattttcc atcacacgca gaaaattttt
     1621 tgcattgttt agtatcacca ctaccaatca ttgttactct ccttgagttt aagtcaaaca
     1681 aaaaatgaaa ttcaaatact ctctcttaac ttattgagat caatcatcaa tataaataaa
     1741 aaatataaac taccagaata accaaagcca cgaaaaattt tttccaatat ttcactattt
     1801 aaacaaaaag caccgcatac ccacgttgat gattccgaaa taaaacacat ccatatttcc
     1861 attactgcca accatgacac tactatccta atcaaaaata cttttttatc tgcccaagca
     1921 ctttttatat ttaacaatac aatatgattt tgtaatttaa aatctaagct ttgcattttt
     1981 ctaaccagtg caaacaaaca accaagcgca ataaaaaaag attggtagga ctggtaaaaa
     2041 ggtagaaata gaatatttaa gaccaatgga tagatccaca tatacctatt tgttaaatta
     2101 ttaataaatt cttttttgtt atccataaaa tttccataaa atattgcgct gatattgcac
     2161 tgagtttatt agcaaacaac gtaaagaaaa tatttattat gataagtgtt ttttaagttt
     2221 cattttcaaa tgatggcgcg taataaaaag tttcacaaat ccgtttttca gactatctaa
     2281 gtatctattt tacaatctat ttcaataatc gttatgtctt aacaactctt cttggcatta
     2341 tagatgctca ctcatatcat ttaatgatac tcttgattaa tctttatgcg atttagcgaa
     2401 attaaaattt ctcttttttg tttgaggctg tactagatta gcagatatgt tacccccgaa
     2461 atatgaagat aacacactgc aaattaaaga aaaaagtaca gaaagaactg ctccgttttt
     2521 ttgtactcga agttaccgcc cgttctgctg ccgatatttt gggtatccat cccaattcgg
     2581 cagtcctgtt ctaccgcaaa atccgtatgg tcatcagcca ttatctggcc ttggctgcca
     2641 atgaggtttt cgagggctct gtcgagttgg acgaaagcta tttcggcgga cggcgtaaag
     2701 gcaaacgtgg tcgcggtgcg gcaggaaaag tggttgtctt cggcattctg aaacgtaacg
     2761 gacgggtcta taccgttgtc gtagataatg ccaagtccga tactttaatg cctgttatca
     2821 aacagaaaat catgccggac agcattgttt ataccgacag cctgagcagt tacgacaagt
     2881 tggacgtaag cggttttatc cattaccgca tcaaccattc caaggaattt gctgaccgtc
     2941 agaaccacat aaacggcatt gagaactttt ggaatcaggc aaaacgcgtc ttgcgcaaat
     3001 agaacggaat tgatcgcaaa tctttcccgc tgttcttgaa agaatgcgaa tttcgattta
     3061 acttcggcac accgtcccga cagctaaaaa tcttgcggga ttggtgtgga tttagggcta
     3121 atctagtaca gccccgattt ttttatctct agccgaatac agttcaaccc aaacgtaccc
     3181 gtcttggata caccccctct tgtttcagtg gcgtaccctg cttcgcaaat tttacagtta
     3241 tcgcataata atcagccata agtaacccca catttctaga aaaatttact gaattcgtgc
     3301 attaactact attcttatag aattatttat ttcatcgtaa agtggaatat attcactatt
     3361 atcagaaatc tcaaataaat attccccttc cggcaaataa aaatcataaa tatacatact
     3421 gtattttccc ccagctccaa atactccgcc tcctaatttt ctacttctct ctgtaagcaa
     3481 ctcatctata ataagttttt taccatcttc ttccacttta aatattttaa ccgatatatt
     3541 atatggatag tttaacttat catcaatcca cctctccccc tgttttggat cataatgtat
     3601 aaaattagtt cctaacgata ttgcataagg tttaccaatt ttctgtttga gttcaataga
     3661 tctttttgtt tttttaccaa gaggaaagtc taccacaaca ggttctgggc taatagccat
     3721 ataaaaaata gtttcaacaa aactgcagct agcaatcaat aggcaagata ttattaataa
     3781 tatttttcta aatgcagaca taataaaaat ttccaaaaaa tccatatcag aatatactaa
     3841 ttatttgtat aattaataag gaagagaaaa attcaaaacg gctatgagat ttccgcctga
     3901 aaataatgaa ataaaagtcc atagtaatga ataatagctt tatcagaccc cctttaatgc
     3961 aaacatagag aatacttccc ttgaagcact atcaatttct acttaactaa aactctagct
     4021 ctatttctaa aattttgtca aaaatagtta aatactttta tttattttaa ataatgatat
     4081 gcatttatgg ttatttgttt tagacagcct aaaacaaacg gggaaatcgt gttttcccga
     4141 acatggctaa tggatagcat tttgtccgtg aggcggctgt gcaggttgtc agcagccaac
     4201 agcaaatcgc ctgcttgcgc ggttgtgccg tcttttttgg tgtagctgcc ttgttgagcc
     4261 aaagtgttgc cgttaccaag atttttgttt acatcttttc gagaaaattg gctttgcatt
     4321 tgccttaaca aagatatttc tgctgctcgt gctttattat ttatattata tttactctgc
     4381 atttttctta caacttgtct caactgactt tgtgtttttt gtaattcacg ttgtaccgat
     4441 tttcctaaac tttcatgttt ggctgcataa ttggtagaat cagttgacat ttgtgtataa
     4501 aaatttttac gaaaattttc gtaactcaga ttaattacat ccgtacttgc agttataaaa
     4561 tcttgtataa attcaataga aactgaatta tcatcagatt tggctttgtt attttccata
     4621 ttaagcctct cttaatttga aaaaattaac ataaacattt aaaaataaaa caaaattata
     4681 taataaaaaa aataatgaga atataaagga taaaaagaga gttaagttat ttaatcggac
     4741 ttgttctcta taaatcataa ggcaccaaat aagccataat aaatttagta aataaaaact
     4801 gcttataccc aactttcttt tcttggaacc tattattatt tcaactctgg atgaaaaaat
     4861 agaatttaaa aatttttttc tttgatatat cgttaatatc tccctagttt ttcttaaaaa
     4921 aaatataatc atatatatac tacacaacat tggtaataaa taaattaaaa gcgaaaggta
     4981 attaaattga taattgtaaa ttatataata aacaacatac gaagaaaaaa ttattataga
     5041 tgatttgcta tacgaataaa aaaatatcct acctagcccg aaccttctta taatttgtac
     5101 tatgtgatca ttcatttcaa tatccattta agctttcaat taattttcta tatttttcaa
     5161 tggcatgtat catttggttg atgatcaagc catgtatgca aagattggaa tatggtatct
     5221 gtcgtgctaa taatgccccc gttactgttt aatttgcgca cagaaaaacc gtcatatgca
     5281 gcaatccagc ccgtggcggt gcggatgccg ttgttggtgt gatcaaataa gctgcctgaa
     5341 aagcctttgg tggcaacggt ttctataccg tcgccgtcca aatctagggc gaggggatcg
     5401 taaacgttat atttgcctga acgtttgaga gctaatttca accactctct tgcccattca
     5461 gggaattcag gcagccaatc ttcaaatttc ggaaattggt cccattcttt tcaagataag
     5521 ggagaaaatc ttgtttatac catttttcca gtaactctcc ccattcactt atccctcgtc
     5581 caatataatc ttcgccccct ttccaagggt ttgcatcatc aggaactaag gaatatataa
     5641 acctagatac ttcttctaat acattgctgt atgtatcagg atccgcaaaa aagtttgcta
     5701 tcttacttgg tgtaaaatca tctatattca ttatagattc gccaagcctc tcgtttccat
     5761 aatccttatt taattcaatt catgctgtaa aacagtagag gattttagca tttttctcgt
     5821 atatctcgag atacatttct taaatttaaa aaaatgttat cgagggatgc aagtaaagaa
     5881 gcagtatttg ttattttgtt attttgttat ctcttccaat tactgcttaa aaagctatct
     5941 gcagcttgaa tagcattatt aacagtaatt tccattttat ttctattgtt atccacatta
     6001 tagattaaat cagataagga ttgaatagaa ccaataaatg aatcccaagc tttatatccc
     6061 aagagtggtg aatagggtgt taatttcaca tctccaaaac cgttaatatt aaaatttgca
     6121 tatgtcatat ctgctttcct ttcaagtaaa ttaaaaaaat aacgtgagga attaaaatta
     6181 aaaataaatt aattatcgac tcaatataat atgaatcaat tagctctctt atggtaaata
     6241 taagaggtaa aaatactaaa aataaactaa taaagttcag aaaaatagta aatggaatat
     6301 tttcatatgg aaaaattcta caaaatacaa gtaatattcc atgacatatt aacaaatgag
     6361 taaaattcat tataaaatat ataaatattt ccccatcgta agatatattc aaataaagac
     6421 atataaacaa tataaagtat ataaaatata ttttttggca tctaaaaaat aaacttttag
     6481 caatcatata tgaatagctt gtagaataga aaacgaaaat tattaattat cgtaggtgtg
     6541 catttattcc aacacggttt catgcagctt aaaaaccaga aattctttct ccctttatcc
     6601 tttcttaaaa atagcgtttc caaattctgc aacgacaggt ttcattcaag taggactgcc
     6661 gtgattgcat caattgcttc gcggcatggc atccatatca cacaacagga catttattct
     6721 cgggtaagtc caccttcatc ctcttcggcc agcaggaaca gtaaaatatg ctctgtactc
     6781 ggatagtaaa tatttccttt ctcactattg tttgtcattt aatcgacagt ctactctttt
     6841 tctaaaattt cgtcaataat agttaaatat atttaaatac atttaaaata ataatataca
     6901 cctgtttcag tctgtctaaa acacgggaaa atatgttatt tgatcacaac ggtgactttg
     6961 ggcagcctgt accttcaata acgcgtggaa aatagatata tacttatatc gtattcgagg
     7021 ctgtcttgtt tccctcaaac aaccattctt ccacactttt gctttacaat tttcgtgtgt
     7081 atccttacaa ttacccctat tgtttttgta tattcctttg ccaaccgtta ttgctatcca
     7141 atctaatatt atggctatcg tatctacacc acaccccgct ctttccgccc tcatcatcct
     7201 cgcccattat cacggcattg ccgccaaatc tttgggattg aaggcaaagg tagtacgcca
     7261 gcctgtcaaa cgtttggcta tggtgacctt acctgcattg gtatggtgtg atgacggcaa
     7321 ccattttaag gaaaagtggt tgttttcggc attctgaaac gcaacggacg ggtctatacc
     7381 gttgtggtgg a
//
LOCUS       DAWKJW010000094         7379 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.094, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000094 DAWKJW010000000
VERSION     DAWKJW010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7379)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7379)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7379
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.094"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            144..1154
                     /gene="dusB"
                     /locus_tag="WJJ54_001335"
     CDS             144..1154
                     /gene="dusB"
                     /locus_tag="WJJ54_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEZ7342197.1"
                     /translation="MHIGGYFIDNPIALAPMAGITDKPFRRLCREFGAGWAVCEMLTS
                     DPTLRNTRKTLHRSDFVDEGGIVAVQIAGSDPQQMADAARYNVSLGAQLIDINMGCPA
                     KKVCNVQAGSALMQNEPLVAAILEAVVCAAGVPVTLKTRLGWHEDHQNLPVIAKIAED
                     CGIAALAVHGRTRTQMYKGEARYELIAETKCRLNIPVWVNGDITSPQKAQAVLKQTAA
                     DGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECSAAILNHVRAMHAFYGDTAGV
                     RIARKHIGWYIGEMPDGEQTRREINRLDSAAAQYDMLAGYLERLAGKTDRWACGYRTN
                     AF"
     gene            1184..1423
                     /locus_tag="WJJ54_001336"
     CDS             1184..1423
                     /locus_tag="WJJ54_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HEZ7342198.1"
                     /translation="MPHTLPDISQCIRQNLEQYFKDLNGTEPCGVYDMVLHQVEKPLL
                     VCVMEQCGGNQSKASVMLGLNRNTLRKKLIQHGLL"
     gene            1426..1962
                     /gene="ruvC"
                     /locus_tag="WJJ54_001337"
     CDS             1426..1962
                     /gene="ruvC"
                     /locus_tag="WJJ54_001337"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEZ7342199.1"
                     /translation="MAASVRILGIDPGSRVTGFGVIDVRGRDHFYVASGCIKTPADAP
                     LADRIAVIVRHIGEVVTVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLP
                     VSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQADAADGLAVALTHALRNHG
                     LAAKLNPSGMQVKRGRFQ"
     gene            2013..2900
                     /locus_tag="WJJ54_001338"
     CDS             2013..2900
                     /locus_tag="WJJ54_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HEZ7342200.1"
                     /translation="MKFIFFVLYVLQFLPFALLHKIADLTGLLAYLLVKPRRRIGEIN
                     LAKCFPEWSEEKRKTVLKQHFKHMAKLMLEYGLYWYAPAGRLKSLVRYRNKHYLDDAL
                     AAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDAQILKGRNRYDNVFLI
                     GRTEGLRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIQTATITGLSRIAALANA
                     KVIPAIPVREADNTVTLHFYPAWKSFPGEDAQADAQRMNRFIEERVREHPEQYFWLHK
                     RFKTRPEGVQDFYKLHETT"
     gene            3619..4413
                     /locus_tag="WJJ54_001339"
     CDS             3619..4413
                     /locus_tag="WJJ54_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEZ7342201.1"
                     /translation="MNTILAFDIETVPDVQGIRTLYDLPSSLSDDEVVLFAQQKRRAQ
                     TGGDFMQHHLHQVVAISCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELIEKHTPQLV
                     SWNGGGFDLPVLHYRSLIYGINAARYWDMGDGDFGDSRDFKWNNYISRYHQRHCDLMD
                     LLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWEAFHAGKLKEIRNYCETDAVNTYL
                     MYLRFCLVSGRFDADEYEMEIKRIRNYLSAQTEDKPHWAEFVQAWK"
     gene            4537..7140
                     /gene="pepN"
                     /locus_tag="WJJ54_001340"
     CDS             4537..7140
                     /gene="pepN"
                     /locus_tag="WJJ54_001340"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HEZ7342202.1"
                     /translation="MSKTVRYLKDYQTPAYRILETDLHFDIAEPQTVVKSRLTVEPQR
                     VGEPLVLDGSAKLLSVKINGAVADYMLEGETLTIAGVPSERFTVEVETEILPAENKSL
                     MGLYASGGNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDG
                     GEYSDGRHWVKWEDPFAKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPK
                     VGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADS
                     RTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRA
                     VRRIENIRLLRQHQFPEDAGPTAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLG
                     EEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQFALWYSQAGTPVLEAEGRL
                     KNNSFELTIKQTVPPTPDMADKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLLT
                     EAEQTFQFESVTEAVVPSLLRGFSAPVHLNYPYSNDDLLLLLAHDSDAFTRWEAAQTL
                     YRRAVAANLAALSDGVELPKHEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGA
                     ENIDPLRYHQAREALLDTLAVRFLPKWHELNRQAAKQENQSYEYSPEAAGWRTLRNVC
                     RAFVLCADPAHIETVAEKYGEMAQNMTHEWGILSAVNGNESDTRNRLLAQFADKFSDD
                     ALVMDKYFALVGSSRRSDTLQQVQTALQHPKFSLENPNKARSLIGSFSRNVPHFHAED
                     GSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNLVKQALQRIRAQEGLSK
                     DVGEIVGKILD"
BASE COUNT         1853 a         1917 c         1963 g         1646 t
ORIGIN      
        1 ccgcctgtga gtggcggggc aggaaatctg tgtgcggatt atgccataaa acgatgcccg
       61 ccccaatcgc gggcgcgtcc ggagattgga aatcctgctt aaaaaatgta caatgtcgca
      121 cttttttgaa acgcggaccc attatgcaca tcggcggcta ttttatcgac aaccccatcg
      181 cacttgcgcc gatggcgggc attaccgaca agccgttccg ccgcctttgc cgcgagtttg
      241 gcgcgggttg ggcagtgtgc gaaatgctga ccagcgaccc gacgctcaga aatactagaa
      301 aaaccttgca ccgcagcgat tttgtcgatg aaggcggcat cgttgccgtg cagattgccg
      361 gcagcgatcc gcagcagatg gcggatgcgg cgcgttacaa cgtcagcctc ggggcgcagc
      421 ttatcgacat caatatgggc tgtcccgcca aaaaagtgtg caacgtccaa gccggcagcg
      481 cgctgatgca gaacgagccg ctggttgccg ccattttgga agccgtcgtc tgtgcggcag
      541 gcgtacccgt taccctcaaa acccgtttgg gctggcacga agaccatcaa aacctgcccg
      601 tcatcgccaa aatcgccgaa gattgcggca tcgccgccct tgccgtccac ggacgcacgc
      661 gcacgcaaat gtacaaaggc gaggcgcgtt acgaactcat cgccgaaacc aaatgccgtc
      721 tgaacatccc ggtctgggtc aacggcgaca ttacctcgcc gcaaaaagcc caagccgtcc
      781 tcaaacaaac cgccgcagac ggcatcatga tagggcgcgg tgcgcaaggc aggccgtggt
      841 tcttccgcga tttgaaacat tacgccgaac acggtgtttt accgcctgcc ttgagtttgg
      901 cagaatgcag tgccgccatt ttgaaccacg tccgcgccat gcacgcgttt tacggcgaca
      961 ccgccggtgt gcgcatcgca cgcaaacaca taggttggta catcggcgaa atgcccgacg
     1021 gcgaacagac acgtcgtgaa atcaaccgct tggacagtgc ggcggcgcaa tacgacatgc
     1081 ttgcaggtta tcttgaaaga cttgccggaa aaaccgaccg ttgggcgtgc ggctaccgca
     1141 caaatgcctt ctgaacactt gattatcctt tgaaagtgca atcatgcccc atacccttcc
     1201 cgatatttcc caatgcatca gacaaaattt agaacaatat ttcaaagacc tgaacggtac
     1261 cgaaccttgc ggcgtgtacg atatggtatt gcatcaggtg gaaaagccgc tgctggtgtg
     1321 tgtgatggag caatgcggcg gtaatcagtc caaagcctcc gtgatgctgg ggctgaaccg
     1381 caataccctg cgtaagaagc tgattcaaca cggtttgttg tgaatatggc tgcaagcgtc
     1441 cgtatcttag gcatcgaccc gggcagtcgc gtaacgggtt tcggtgtcat cgatgtcagg
     1501 gggcgggatc atttttacgt tgcctcaggc tgcatcaaaa cgcctgccga tgcgcctctg
     1561 gcagacagga ttgccgtgat tgtgcggcac atcggcgaag tcgttactgt ttacaagcct
     1621 caacaggcgg cggtggaaca ggtgttcgtc aacgttaatc cggcatcgac gctgatgctc
     1681 ggtcaggcta ggggcgcggc attggcggca ttggtcagcc ataagctgcc cgtttcggaa
     1741 tacacggcct tgcaggtcaa acaggcggta gtcggcaaag gcaaggcggc gaaagaacag
     1801 gtgcagcata tggtggtgca gatgctgggg ctttcgggaa cgccgcaggc ggatgcggcg
     1861 gacggtcttg ccgtcgcgct gacccacgcc ttacgcaacc acgggcttgc cgccaaactc
     1921 aatccttcgg ggatgcaggt caagcgcggc aggtttcaat agtttcagac ggcatttgta
     1981 ttttgccgtc tgaaaagaaa atgtgtatcg agatgaaatt tatatttttt gtactgtatg
     2041 ttttgcagtt tctgccgttt gcgctgctgc acaagattgc cgacctgacg ggtttgcttg
     2101 cctaccttct ggtcaaaccg cgccgccgta tcggcgaaat caatttggcg aaatgttttc
     2161 ccgaatggag tgaggaaaag cgtaaaaccg tgttgaaaca gcatttcaaa cacatggcga
     2221 aactgatgct cgaatacggc ttatattggt acgcgcctgc cgggcgtttg aaatcgctgg
     2281 tgcgctaccg caataagcat tatttggacg acgcgctggc ggcgggggaa aaagtcatca
     2341 tcctgtatcc gcactttacc gcgttcgaga tggcggtgta cgcgcttaat caggatgtcc
     2401 cgctaattag tatgtattcc caccaaaaaa acaagatatt ggacgcacag attttgaaag
     2461 gccgcaaccg ctacgacaac gtcttcctca tcgggcgcac cgaagggctg cgcgccctcg
     2521 tcaaacagtt ccgcaaaagc agcgcgccgt ttctgtatct gcccgatcag gatttcggac
     2581 gcaacgattc ggtttttgtg gattttttcg ggattcagac ggcaacgatt accggcttga
     2641 gccgcattgc cgcgcttgca aatgccaaag tgattcccgc catccccgtc agggaggcgg
     2701 acaatacggt tacactgcat ttctacccgg cttggaaatc ctttccgggt gaagacgcgc
     2761 aggccgacgc gcagcgtatg aaccgcttta tcgaagagcg ggtgcgcgaa catcccgagc
     2821 agtatttttg gctgcacaag cgttttaaaa cccgtccgga aggtgtacag gatttttaca
     2881 aattacacga aactacatag tggactatta agggaaaatt gagttttgct taaatgcgaa
     2941 aaattgaatt atataaacag aagcatttaa taattgctgt tattttaagt gtctaaaaaa
     3001 taatattttt tgattttaaa aatagatttc aaagaaaatt tggagaatac atgataaatc
     3061 aatgaatata ttctattgat atggttaata tattaaaatt attttccttt aaaaacataa
     3121 tattataaat tattattcaa taactgctat tttattcggt gccagcttga gaaatatatt
     3181 gtcaaatata tagacattat aaaattaagt atcaatttaa ataaattttt agaattttaa
     3241 tctaaaaaat caaaaaattc actattttat aaaataaacg cttctatatt cgttttgtaa
     3301 aaaatgcttg gcaagctgta aaaaatggcg tacatttcgc tacatggaat tacacaacag
     3361 gcaggaaatg ccgtctgaaa ggattttccg gtcaatcttg cgattggtcg gggtttcatc
     3421 ggaaacggtg aaacgaaagt ttgccggcgt agagttgagc tacgcgggta aagccgcagg
     3481 cgaaagcctg tattgtttgt gaagcgtaaa tctctgattt gaggtattgg ggcaatcctg
     3541 tggggggttg cctctttttt tatccgcctt ttaatgacac aataggcgca agtctgtttt
     3601 tgaatgcaag gtactgccat gaatacgatt ttggctttcg atattgaaac cgtacccgat
     3661 gtgcagggta tccgtacgct gtatgacttg ccgtcttccc tgtccgacga tgaagtggtg
     3721 ctgtttgccc agcaaaaacg ccgtgctcag acaggcgggg attttatgca gcatcatctt
     3781 catcaggttg tggcgatttc gtgctgcatg cgttgggggc aggataaagt ccatgtcggt
     3841 accatcggcg agatggatga cggcgaggaa gtggtcattg ccaagttttt cgagttgatt
     3901 gaaaaacata cgccgcaact ggtcagttgg aacggcggcg gtttcgatct gccggttctg
     3961 cattaccgct ccctgatata tggcatcaac gccgcgcgct attgggatat gggcgacggc
     4021 gatttcggcg acagccgcga tttcaagtgg aacaactaca tcagccgcta ccaccaacgt
     4081 cattgcgatt tgatggattt gctcgcgctt taccagccga gggcgaatgt gccgctggac
     4141 gatatggcga aactgtgcgg ttttccgggt aaattgggta tggacggcag caaggtctgg
     4201 gaggcattcc atgccggtaa attgaaggaa atccgcaatt attgtgaaac cgatgccgtg
     4261 aatacgtatt tgatgtatct gcgtttttgt ctggtcagcg gcagattcga cgcggacgaa
     4321 tacgaaatgg aaatcaagcg gatcagaaac tatctttccg cccaaacaga agacaaaccg
     4381 cattgggcag aatttgtcca agcgtggaaa tagaaaaact gctgtccgaa ggcggtacgc
     4441 ttgtgccgcc gtttcggttt cagacggcat acgcgggatg cgcccatgcc gtctgaagcc
     4501 ttttccagtc aaaccaaaca atattgaaag aaaaaaatga gcaaaaccgt ccgttatctg
     4561 aaagattacc aaacgcctgc ctaccgtatt ctcgaaaccg acctgcattt cgatattgcc
     4621 gaaccgcaaa ccgtcgtgaa atcccgtttg acggtcgagc cgcagagggt gggggagccg
     4681 ctggtgttgg acggttcggc gaaacttttg tccgtcaaaa tcaacggggc ggtggcggat
     4741 tatatgttgg aaggcgagac gctgacgatt gcgggcgtgc cgtccgaacg cttcaccgtc
     4801 gaagtggaaa ccgaaatcct gccggcggaa aacaaatcgc tgatggggct gtatgcttcc
     4861 ggaggcaatc tgtttaccca gtgcgagccg gagggcttcc gcaaaatcac gttttacatc
     4921 gaccgtcctg atgtgatgtc caagttcaca accaccatcg ttgcggacaa aaaacgctat
     4981 cccgttttgc tctccaacgg caacaaaatc gacggcggcg agtattcaga cggccgccat
     5041 tgggtgaaat gggaagaccc gtttgccaaa ccgagttatc tgtttgcttt ggtcgcgggc
     5101 gatttggcgg tcacggaaga ctatttcacc accatgagcg gcagaaacgt caaaatcgag
     5161 ttttacacca ccgaagcgga caagcccaag gtcggctttg ccgtggaatc gctgaaaaac
     5221 gcaatgaagt gggacgaaac gcgcttcggt ttggaatacg acttggatat tttcatggtc
     5281 gtcgccgtgg gtgatttcaa tatgggtgcg atggaaaaca agggtttgaa catctttaac
     5341 accaagttcg tcctcgccga cagccgtacc gccaccgata ccgattttga aggcattgaa
     5401 tccgtggtcg gacacgaata tttccacaac tggacaggca accgcgttac ctgccgcgat
     5461 tggttccagc tttcgctgaa agaagggttg accgtgttcc gcgaccaaga attttccggc
     5521 gaccgcgcca gccgcgccgt gcgccgcatc gagaacatcc gcctgctgcg ccagcaccag
     5581 ttccccgaag acgcaggccc gaccgcccat ccggtgcgcc ccgccagcta tgaggagatg
     5641 aacaatttct acaccatgac cgtttatgaa aaaggcgcgg aagtggtgcg gatgtatcac
     5701 accttgctcg gcgaagaggg cttccaaaaa ggcatgaagc tctatttcca acgacacgac
     5761 gggcaggccg tgacctgcga cgatttccgc gcggcgatgg cggacgcgaa cggcatcaat
     5821 ctcgaccagt tcgccttgtg gtacagccag gcgggtacgc ccgtcttgga agcggaaggt
     5881 cgtctgaaaa acaatagttt cgagttaacc atcaaacaaa ccgtgccgcc cacgcccgat
     5941 atggcggaca agcagccgat gatgattccc gtcaaagtcg ggctgctgaa ccgcaacggc
     6001 gaagcggtgg cattcgatta tcagggcaaa cgcgcaaccg aagccgtgtt actgctgacc
     6061 gaagccgaac agaccttcca gttcgaaagc gtaaccgaag ccgtcgttcc ctcgctgctg
     6121 cgcgggttca gcgcgccagt gcatctgaac tatccgtaca gcaacgacga cctgctgctc
     6181 ctgcttgccc acgacagcga cgccttcacg cgctgggaag ccgcgcaaac gctctaccgc
     6241 cgcgccgtcg ccgccaacct tgccgcgctt tcagacggcg tcgagttgcc gaaacatgaa
     6301 aaactgcttg ccgccgtcga aaaagtcatt tcagacgacc tcttggacaa cgccttcaaa
     6361 gccctgcttt tgggcgttcc gtctgaagcc gaactgtggg acggcgcaga aaacatcgac
     6421 ccgctgcgct accatcaggc gcgcgaagcc ttgttggata cgcttgccgt ccgcttcctg
     6481 ccgaaatggc acgaattgaa ccgtcaggcg gcgaagcagg aaaaccaaag ctacgagtac
     6541 agccccgaag ctgccggctg gcgcacgctg cgcaacgtct gccgcgcctt cgtcctgtgc
     6601 gccgaccccg cgcacatcga aaccgttgcc gaaaaatacg gcgaaatggc gcaaaacatg
     6661 acccacgaat ggggcatcct gtccgccgtt aacggcaacg aaagcgatac gcgcaaccgc
     6721 ctgctggctc agtttgccga caagttttca gacgacgcgc tggtgatgga caaatatttc
     6781 gccctcgtcg gctcaagccg ccgcagcgac accctgcaac aggttcaaac cgccttgcag
     6841 catccgaagt tcagcctcga aaatcccaac aaagcccgct cgctcatcgg cagcttcagc
     6901 cgcaacgtcc cgcatttcca cgcagaagac ggcagcggct accgcttcat cgccgacaaa
     6961 gtcatcgaaa tcgaccgctt taacccgcag gtcgccgccc gcctggtgca ggcgttcaac
     7021 ctctgcaaca agctcgagcc gcaccgcaaa aacttggtga aacaagcatt gcagcgcatt
     7081 cgggcgcagg aaggattgtc gaaagacgtg ggcgaaatcg tcggcaaaat tttggattga
     7141 ggccgtcaaa cagaaaaaca atgccgtctg atatagttac acacacgttt tatcatcact
     7201 tccccatcgt tttattacgc aatggcaaaa cggccgcaaa gtcatattaa ttatagtgga
     7261 ttaacaaaaa tcaggacaag gcgacaaagc cgcagacagt acagatagta cggtaaggcg
     7321 aggcaacgct gtactggttt ttgtgaatcc actatattgc tagaagtgca ccgattaag
//
LOCUS       DAWKJW010000095         7334 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.095, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000095 DAWKJW010000000
VERSION     DAWKJW010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7334
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.095"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            201..413
                     /locus_tag="WJJ54_001341"
     CDS             201..413
                     /locus_tag="WJJ54_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HEZ7342203.1"
                     /translation="METLILDIGGMSCGGCVKSVTRILEGVKGVASVEVSLENKSATV
                     GYDPAQTDAGALIEAVEDGGYDAALK"
     gene            561..2144
                     /locus_tag="WJJ54_001342"
     CDS             561..2144
                     /locus_tag="WJJ54_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HEZ7342204.1"
                     /translation="MPNKKKKAAFARAATENGVPDVSNIKNSYDDLMYESKAFSQTAI
                     NALEARARMMGLQPAPAANAKVLELGCSMGGNIITQALYYPDAEFVGIDLSGRQVAQG
                     NAIIEKMGLKNVRLEEKDILTVDESFGKFDYIIVHGIWSWVPDAVKDKIFSICRNNLT
                     KHGIAYISYNVYPGWKRQEQLREIMYFAGRDVLEEPLEARTRKGLDALKALAEILEND
                     KGLGGGGKLPAIQKILNHNTYYVAHEYMEIFNDPIYVNGFIEWANRHRLAYIGDTDLH
                     ASFVSWMAEHTRERILALAGGDYIAKEFYSDILSDRQFRRSLLCREEVGDTVRRDESV
                     AVEVIESLNFRPARGETINFDENDTLLSGIRDVMKTGEAFKTEDVAENLARRFPGLTF
                     DRMKINSRLLLQTILGRFSVSSDNAGKQFFEDHKTYVPARFTDYVAAFVEHGAEAFVQ
                     PANRYNESTPSFGYGHLYIMRQLSRPTSKQALIETVAENLNIVSTTPDGLTFHPPAEV
                     YVEEILADLADRHFLVSAD"
     gene            2226..3323
                     /locus_tag="WJJ54_001343"
     CDS             2226..3323
                     /locus_tag="WJJ54_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HEZ7342205.1"
                     /translation="MNQTFTLPDTRPYPQNPIKNHLLLNAYQLAHNSSQASRKLSSGQ
                     LQTEIRGMLEQNHYINLSLALTMSPDAGTYAALLSSVNAVLDCEKEGEVQWFALPVVL
                     VSGCKKERAIEMKLPTEGLFACLQNYPHLRALTQETQWLPYLVHSSDLSAVAPDEWWR
                     AKQNTEAAAQHLRRFAPRPLLLPEGQSVHVVYALGFGSGKVQTALGQNLLQAGLPLMQ
                     VWQENLASEGVTLFANPLSPDSPVRALSDGSHTRQRMAMDVFAANAIRAVRMQSPRVG
                     VVAAAKAGGQILFGFNATDGAFEVVPQVFSWQLSFTDNIGVIQQNFLDLMAECRVEHV
                     YLLHNPLGEQESIPSYAEALKREGHNPFFSA"
     gene            3437..4552
                     /locus_tag="WJJ54_001344"
     CDS             3437..4552
                     /locus_tag="WJJ54_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEZ7342206.1"
                     /translation="MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDG
                     GEGTVDAIRHSLDLEEKCLQVTGPFGQKEVMRYFQKEQLALFEVADLVGLGKIPLEKR
                     NPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNALP
                     ACGQSLLNLASVSTENRYKIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFE
                     AVDQAIQDFYEKVSPATLKLKGAGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKV
                     SDVDLVIVGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLVEDLPSLPFENIQAA
                     FSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI"
     gene            4677..5132
                     /locus_tag="WJJ54_001345"
     CDS             4677..5132
                     /locus_tag="WJJ54_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HEZ7342207.1"
                     /translation="MKKPKILFVCLGNICRSPMAEYILRRRAAEAGIPLEADSAGTSG
                     WHDGEDMHRETAKILKKHGIDASGFTSRKIRQSDAAAFDCIIAMDGKNLSELERTFGR
                     RPEKIFKLTDLIPESGYDHVPDPWYTGDFEETFRLADAGCRALLEKISK"
     gene            5203..5679
                     /locus_tag="WJJ54_001346"
     CDS             5203..5679
                     /locus_tag="WJJ54_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEZ7342208.1"
                     /translation="MKTNFKQKIIEQARSEGLQVTALREQVLDIVLQQSGVIKAYNVL
                     SQMQQQSEGVLAPPTAYRALDFWAEQGVLHKVAAVNGYILCSHAQHECDDHCHDHEEA
                     EAHHSAFILVCTECGTADEQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQK"
     gene            5667..6593
                     /locus_tag="WJJ54_001347"
     CDS             5667..6593
                     /locus_tag="WJJ54_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEZ7342209.1"
                     /translation="MSEMKKTKVHLISGFLGTGKTTALKSLMAQKDPNEKWVIIVNEF
                     GEIGIDGAVLSDNGIPVAEIAGGCLCCTSGPQMGVTVQKMLRDAKPDRLMIEASGLAH
                     AASVIDELKAKPLDSLLEIGAVFTVVNPRQFINPDYAQQALYKDQIGICDVLVASKTD
                     LCTPEQLAEFHDKAAKLFPPKAKVVEVQNAQLDIRWLDIPVIEKSRYRLKALPDNTMG
                     FQSQGFTFPAGRDFDGEKLTNFFNDLPKMTEGLVRAKGVFQVLGTWVWLNWVDGQWGA
                     NQVSWRRDSRFELIAKSFDADLIEQKLKDALE"
     gene            6658..7215
                     /locus_tag="WJJ54_001348"
     CDS             6658..7215
                     /locus_tag="WJJ54_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ7342210.1"
                     /translation="MKPKFKTVLTALLLAVSLPSMAATHVLMETDMGNIRLVLDESKA
                     PKTVANFVRYARKGFYDNTIFHRVIDGFVIQGGGFTEDLVQKASDKAVANESGNGLKN
                     TVGTIAMARTADPDSATSQFFINLADNDSLNYKNGQYGYTVFGRVESGMDAVSKIARV
                     KTATRGFYQNVPVQPVKIRRVVVGQ"
BASE COUNT         1924 a         1797 c         1908 g         1705 t
ORIGIN      
        1 atgcgccgat tgccaaggcg atgatgctca accagggttt ttgtgaagcg ttcattgttg
       61 tcgtcctgat gggaattgcc gccattatgc gcaagcgtcc gtctttttcc aaaccgccgt
      121 accgtttccg cgtttgccca agttcacgcc ccgacttaca ataacgcccg tcagattgca
      181 gttccaacga aaggaaaatg atggaaaccc ttatcctcga catcggcggc atgagctgcg
      241 gcggctgcgt caaaagcgtt acccggatat tggaaggcgt aaaaggcgtg gcaagcgtcg
      301 aagtcagcct tgaaaacaaa agtgcgaccg tcggatacga ccccgcgcaa accgatgcag
      361 gggcgttgat tgaagccgtt gaagacggcg gctatgatgc cgcgttgaaa taaagcggca
      421 aaaatgccgt ctgaagcctt cgcgcctccc cgatgccgtc tgaagtacgc tccgcgcctt
      481 cagatggcat ttgatttagt tgaacgggta ggatgaattg gttaaacttg cgggcaatag
      541 tgccttcaga caaacaaaat atgccgaaca aaaagaaaaa agccgccttt gcgcgtgctg
      601 caacggagaa cggtgtgccg gacgtgtcca acatcaaaaa ttcatatgat gatttgatgt
      661 atgaatccaa agcattttcc caaaccgcca tcaacgcctt ggaggctcgc gcccgcatga
      721 tgggtttgca gcccgcgccc gccgccaatg ccaaggtctt ggagctgggc tgttcgatgg
      781 gcggcaacat catcacgcag gctctttatt acccggatgc ggaatttgtc ggtatcgact
      841 tgtccggcag gcaggttgcg cagggcaacg ccatcattga aaaaatgggc ttgaaaaatg
      901 tgcgtctgga agaaaaagat attttgaccg tcgatgagtc attcgggaag ttcgactata
      961 tcatcgtcca cggcatttgg tcgtgggtgc ctgacgcagt taaagacaaa atcttttcga
     1021 tttgccggaa caacctgacc aaacacggca ttgcctatat ttcatacaat gtttaccctg
     1081 gctggaaacg gcaggagcag ttgcgcgaaa ttatgtactt tgccggcagg gatgtgcttg
     1141 aagaaccctt ggaagcgcgg acgcggaaag gcttggacgc gctcaaggcg ctggcggaaa
     1201 ttttggaaaa cgacaaaggc ttgggcggcg gcggcaaact tccggcgatt caaaaaatat
     1261 tgaatcacaa tacttattat gtcgcacacg aatatatgga aatattcaac gacccgattt
     1321 acgttaacgg cttcatcgaa tgggcaaacc gccaccggct ggcgtatatc ggggataccg
     1381 atttgcacgc gtcttttgtt tcttggatgg cggagcatac gcgggagcgg attctggcat
     1441 tggcaggggg cgattatatt gccaaagaat tttacagcga tattttatcc gaccgccaat
     1501 tccgccgttc gcttttatgc cgtgaggaag tcggggatac tgtcaggcgt gacgagtcgg
     1561 ttgccgtcga agtgatagaa agtttgaatt tccgcccggc aagaggggaa acaatcaact
     1621 ttgatgaaaa cgataccctg ctttcgggca tacgcgatgt gatgaaaacc ggagaggcgt
     1681 ttaaaacgga agatgttgcg gaaaatctcg cccgccgatt tcccggtttg acattcgacc
     1741 gtatgaaaat caattcccgg cttttattgc aaaccattct cgggcgtttt tctgtttcat
     1801 cagacaatgc gggcaaacaa ttttttgaag accataaaac ctatgtgccg gcgcgtttta
     1861 cagattatgt cgccgccttt gtggaacacg gcgcggaagc gtttgtccag cctgccaacc
     1921 gttacaacga aagcaccccc tcattcgggt acgggcattt gtacattatg cggcaattgt
     1981 cgcggccgac gagcaaacag gcattgattg aaacggttgc cgaaaacttg aacatcgtca
     2041 gcaccacgcc cgacggtttg acattccatc cgcctgccga agtgtatgtg gaagaaatat
     2101 tggcagactt ggcagacagg cattttctcg tttcggcgga ttgacgggca agtcccgacg
     2161 gcaatccgtc cgatatattt tcaaacagga aaaacacaca ctgcgaaaag cggtacacga
     2221 catatatgaa ccagacattt accttgcccg atacgcgccc gtatccccaa aatccgatta
     2281 aaaaccacct gctgctcaat gcctaccagt tggcgcataa ttcttcccag gcttcgcgca
     2341 aactctcgtc cggccaactt caaaccgaaa tcagggggat gcttgagcaa aaccactata
     2401 tcaacctttc cctcgcgctg acgatgtcgc ccgatgccgg aacttatgcc gcgctgcttt
     2461 ccagtgtgaa cgcggtactc gattgcgaga aagaaggcga agtgcagtgg ttcgccctgc
     2521 cggtcgtgct ggtgtccggc tgcaagaaag aacgggcaat cgagatgaag ctgccgacgg
     2581 agggattgtt tgcctgtttg caaaactatc cgcacctgcg cgcgttgacg caagagacgc
     2641 aatggctgcc ttatcttgta cattcctccg atttgagtgc ggtcgcgccg gatgagtggt
     2701 ggcgtgccaa acaaaatacc gaagcggcgg cgcaacactt acgccgtttc gccccgcgcc
     2761 ctttgctttt gcccgaaggg cagtccgtcc acgtcgttta cgcgctgggt ttcggcagcg
     2821 gcaaagttca gacggcattg ggtcagaacc ttcttcaggc aggtctgccc ttgatgcagg
     2881 tatggcagga aaatcttgca tcggaaggcg ttacgctgtt tgccaatccg ctttccccgg
     2941 attctccggt acgcgcgctt tccgacggca gccacacgcg ccagcgcatg gcgatggatg
     3001 tgtttgcggc aaacgcgata cgcgccgtcc gtatgcagag tccgcgcgtc ggcgtggtcg
     3061 cagcggcaaa ggcgggcgga cagattttat tcgggtttaa tgcgaccgac ggcgcgtttg
     3121 aagtcgtgcc gcaggtgttt tcgtggcagc tttcctttac cgacaatatt ggcgttattc
     3181 agcaaaattt tttggattta atggcagaat gccgtgtaga acacgtttac ctgttgcaca
     3241 atcccttggg cgaacaggaa agcatcccga gctatgcgga agcattgaaa cgggaagggc
     3301 acaatccgtt tttcagcgca tagtgatttg tagtagtgat aggctttctc atttctataa
     3361 taaatcaaaa taaagagcac aacacttttt cattctgtgt tgtgccttga gtgaaacgaa
     3421 aggatgaatt ataaatatga agattgtaat tgcaccggat tcgtttaagg aaagcttgac
     3481 agctcaacag gtagctgaag caataaaaag aggcttccaa caatcgatag cagatgtgga
     3541 atgtctcctc tgtcctgtcg gtgatggggg agaaggcact gtagatgcta tccgacattc
     3601 tcttgaccta gaagaaaaat gtctccaagt gacaggacct tttggacaaa aagaagtcat
     3661 gcgctatttt caaaaagaac aactagccct attcgaagtt gctgatttgg ttggtcttgg
     3721 aaaaatcccg ctagagaaac gaaatccatt acaaatccaa actcgtggta ttggagaatt
     3781 gattcgccac ctcattagtc aagaaattaa agaaatctat attggcgttg gcggtacggc
     3841 cagtaatgat ggaggtattg ggattgctgc tggtttaggt tatcaatttt atgatgagga
     3901 tggaaatgcc ttacccgctt gcggtcaatc cttactaaac ctagcttctg tttcaacaga
     3961 aaatcgctat aaaattcctg aagatgttca cattcgtatt ttagcagatg ttgtgagtcc
     4021 cttatgtgga caccaaggtg cgacctatac gtttggcaag caaaaagggt tggattctac
     4081 tatgtttgag gccgtagatc aggcaataca agatttttat gaaaaagtct cccctgcaac
     4141 attaaaactt aaaggagcag gagctggtgg aggcatcgct ggtggtttgt gcgcctttgc
     4201 tcaggcaagt atcgtatctg gaattgacac ctgcctggac ttgattgact ttgataagaa
     4261 agtgtcagat gttgacttgg ttatcgttgg tgaaggaaga ctagatcgtc aaagtttagc
     4321 agggaaagcg cctattggtg tagcaaaaag aacccctgtc ggagttcctg ttgtcgctat
     4381 ttgtggcagt ctcgttgaag atttgccttc cctgccattt gaaaatatcc aagctgcctt
     4441 ttctattttg gagaaaagtg aacctttaga agatagtttg aaaaatgcca gtctctattt
     4501 ggagcatacg gcttctaata ttggacactt attaaatatg cctaagattt agccaaacca
     4561 tttcttccag atggatgttt tggctggttc tgccttatgc ggttacgatt aaccgaccga
     4621 tgacgtctga aagggtttcc gcttcagacg gcatcgcgcc ggaacaggga ggggatatga
     4681 aaaaaccgaa aatccttttt gtctgcctcg gcaacatctg ccgttcgccg atggcggaat
     4741 acattttgcg ccgccgcgcc gccgaagcgg gcattcccct tgaagcggac agcgcgggga
     4801 catcgggctg gcacgacggc gaagatatgc accgcgagac ggcaaagata ttgaaaaaac
     4861 acggtatcga tgcttcaggc tttaccagcc gcaaaatccg ccaaagcgat gcggcggcgt
     4921 ttgactgcat catcgcgatg gacggcaaga atttgtccga attggaaaga accttcggca
     4981 ggcggccgga aaaaatattc aagctgaccg acctgatacc cgaaagcggt tacgaccatg
     5041 tccccgatcc gtggtatacg ggcgattttg aagaaacctt caggcttgcg gatgcgggct
     5101 gtcgggcatt gttggaaaag atttccaaat aaagcaattg aatacaaata taaaaccgcc
     5161 tcctgccgta tcggttgttc agacggcata aacagagaat ttatgaaaac aaatttcaaa
     5221 cagaaaatta tcgaacaggc acgcagcgaa ggcttgcagg taaccgcttt gcgcgagcag
     5281 gtattagata ttgtcttgca gcaaagcggc gtgattaaag cctacaacgt cttgtcgcag
     5341 atgcagcagc aaagcgaggg cgtgcttgca ccgcctaccg cctaccgcgc ccttgatttt
     5401 tgggcggagc agggcgtttt gcacaaagtg gcggcggtca acggctatat tttgtgcagc
     5461 cacgcgcagc acgagtgcga cgaccattgc catgaccacg aagaagccga agcgcaccac
     5521 agcgcgttta ttttggtctg caccgaatgc ggcacggcgg acgagcaaac cctcagccac
     5581 gagtgggcgg cactgcgcgc aggcgttgcc gaaagcggct ttgcgctgaa agaagaacac
     5641 gttgttttaa ctggaatctg taaaaaatgt cagaaatgaa aaaaaccaaa gtccacctga
     5701 tttcaggttt tctgggaaca ggcaaaacca ctgcgctcaa aagcctgatg gcgcaaaaag
     5761 acccgaacga aaaatgggtc atcatcgtca acgagttcgg cgaaatcggc attgacggcg
     5821 cggtattgag cgacaacggt atccctgtgg cagaaatcgc cggcggctgt ttgtgttgca
     5881 cctccggccc gcaaatgggc gtaaccgtgc agaaaatgct gcgcgacgcc aagcccgacc
     5941 gcctgatgat tgaagcaagc ggactggctc acgcagccag cgtcatcgac gaactcaaag
     6001 ccaaaccgct ggacagcctt ttggaaatcg gcgccgtctt taccgtcgtc aatccgcgcc
     6061 agttcatcaa ccccgattac gcgcaacagg cgttgtataa agaccaaatc ggcatctgcg
     6121 acgtattggt cgccagcaaa accgatttat gcacccccga acagcttgcc gaatttcacg
     6181 acaaagcggc aaaactgttc ccgcccaaag ccaaagtggt tgaagtccaa aacgcacaac
     6241 tcgacatccg gtggctcgat attcccgtca tcgaaaaatc acgctaccgc ctcaaagccc
     6301 tgccggataa taccatgggc ttccagtcgc aaggtttcac attccccgcc ggacgcgatt
     6361 tcgacggcga aaagctgacc aactttttca acgacctgcc caaaatgacc gaaggactcg
     6421 tccgcgccaa aggcgtgttt caagtattgg gaacgtgggt gtggctcaac tgggtagacg
     6481 gacagtgggg cgcgaaccaa gtctcatggc ggcgcgattc gcgttttgaa ttgattgcca
     6541 aatcgtttga tgcggattta atcgaacaaa agctcaaaga cgcattggaa tagcgttcac
     6601 gcgccttcag acggcatatg aaatgaaaat gccgtctgaa ggtctgagga ggacgggatg
     6661 aaacccaaat tcaaaaccgt tttaaccgcg ctgcttttgg cggtttccct gccgtctatg
     6721 gcggcaaccc atgttttgat ggaaaccgat atgggcaata tccgtttggt tttggacgaa
     6781 tccaaagcac ccaaaaccgt tgccaatttc gtgcgctatg cccgaaaagg cttttacgac
     6841 aatacgattt ttcaccgcgt tatcgacggt tttgttatcc agggcggcgg atttaccgag
     6901 gacttggtac aaaaggcaag cgataaggcc gttgccaacg aatccggcaa cggtttgaaa
     6961 aacactgtcg gcaccatcgc catggcgcgg acggccgatc cggattccgc caccagccaa
     7021 ttctttatca atctggcgga caatgattca ctcaactaca aaaacggaca atacggctat
     7081 accgttttcg gcagggtcga aagcggcatg gacgccgttt ccaaaatcgc ccgcgtcaaa
     7141 accgccacgc gcggctttta tcaaaacgta cccgtacagc ccgtcaaaat ccgtcgcgtt
     7201 gttgtcgggc agtaacacgc agacagacgt tcagacggcg tcgcccgttt cccaaaaaac
     7261 gccgtttaaa ttaaaaaaat attttaaaac agacagttga tattgacaaa ttcaaaccga
     7321 ggattttaaa atgc
//
LOCUS       DAWKJW010000096         7332 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.096, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000096 DAWKJW010000000
VERSION     DAWKJW010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7332
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.096"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(98..1015)
                     /gene="thrB"
                     /locus_tag="WJJ54_001349"
     CDS             complement(98..1015)
                     /gene="thrB"
                     /locus_tag="WJJ54_001349"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEZ7342211.1"
                     /translation="MSVYTSVSDDEMRGFLSGYDLGEFVSLQGIAQGITNSNYFLTTT
                     SGRYVLTVFEVLKQEELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAGKPACLVA
                     CLKGSDTALPTAEQCFHTGAMLAKMHLAAADFPLEMENPRYDAWWTEACARLLPVLPR
                     DDAALLCSEIDALKDNLGNHLPSGIIHADLFKDNVLLDGGQVSGFIDFYYACRGNFMY
                     DLAIAVNDWVRTADNKLDEALKKAFIGGYEGVRPLSAEEKAYFPTAQRAGCIRFWVSR
                     LLDFHFPQEGEMTFIKDPNAFRNLLLSLG"
     gene            complement(1052..1780)
                     /gene="ubiG"
                     /locus_tag="WJJ54_001350"
     CDS             complement(1052..1780)
                     /gene="ubiG"
                     /locus_tag="WJJ54_001350"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HEZ7342212.1"
                     /translation="MGGKMSDKKYNVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLR
                     LDYIDGHADLCGKRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALNN
                     VADIEYECIRVEDLAEAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFST
                     INKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYH
                     VLSQTYALCDSTDVNYMFACRPAF"
     gene            1932..3173
                     /locus_tag="WJJ54_001351"
     CDS             1932..3173
                     /locus_tag="WJJ54_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235268.1"
                     /note="tryptophan transporter of high affinity; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HEZ7342213.1"
                     /translation="MPTKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLL
                     YTWFSMLSSGLMILEVNTHYPHGASFDTMVKDLLGRGWNIINGIAVAFVLYLLTYAYI
                     FVGGDLTAKGIGNALGGDVSLTVGQLVFFGILAFCVWASARLVDRFTSVLIGGMVLTF
                     IWATGGLIADAKLPVLFDTQAPVGTNYWIYAATALPVCLASFGFHGNVSSLLKYFKGD
                     APKVAKSIWTGTLIALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQT
                     GNMDKILSLFSYMAIATSFLGVTLGLFDYIADIFKWNDSVSGRTKTAALTFLPPLISC
                     LLFPTGFVTAIGYVGLAATVWTGIIPAMLLYRSRQKFGAGKTYKVYGGLWLMVWVFLF
                     GIINIAAQVLSQMELVPVFKG"
     gene            3323..4378
                     /locus_tag="WJJ54_001352"
     CDS             3323..4378
                     /locus_tag="WJJ54_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ7342214.1"
                     /translation="MKLKIDIATNNFKHGGGTERYTLDLVKGLNRQNITPAVYATKFD
                     HGIPEYAMIEPHLVDQHRTLKKLRSFLFSSRLAQTRKNSAAKLIACHHADYADLLICG
                     GTHLGYLHHMAQKPNLLDRLAIRRNRSNYATAKLIMAHSHMMRRELVGLYGVPPERIQ
                     VAPPPADTERFFPQPGETADLRAKYGFADYETVFLFPSTGHTRKGLELLADFFEHTGL
                     PVKLAVVGSPLPRPMKNVVGLGFCTDMPELYRAADFTIMASLYEPFGLVGVESVLCGT
                     RVVLSENMACTEVMNEEAGFFFSRQNPETLAQAVAQAVSLKKQGGHRLSDPMRALNYN
                     PSLSHHIDRLTDILASV"
     gene            4654..5217
                     /gene="gmhB"
                     /locus_tag="WJJ54_001353"
     CDS             4654..5217
                     /gene="gmhB"
                     /locus_tag="WJJ54_001353"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HEZ7342215.1"
                     /translation="MKLIILDRDGVINQDRDDFVKSVDEWIPVEGSMDAVAFLTQAGY
                     TVAVATNQSGIGRKYFTVQNLTEMHAKMHRLVRQAGGEINGIWFCPHTDADNCNCRKP
                     KPGMIEDIIGRFNAQASETWLVGDSLRDLQAIDAVGGKPALVLTGKGKKTLSQHGHEL
                     PEHTQVFDTLLDFSQYIMQENAAPQAD"
     gene            5247..5990
                     /locus_tag="WJJ54_001354"
     CDS             5247..5990
                     /locus_tag="WJJ54_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEZ7342216.1"
                     /translation="MLIIRNLIYWLILCSTLIFLFPFMLLASPFRDGAHKMARVWVKI
                     LNLSLKHIVGLKYRIIGAENIPDRPAVICAKHQSGWETLALQDIFPPQVYVAKRELFK
                     IPFFGWGLKLVKTIGIDRNNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGK
                     YKLGGARMAKMFEMDIVPVALNSGEFWPKNSFLKYPGEITVVICPTIPHASGSEAELM
                     EKCEHLIETQQPLISGAGPFAAKMPSETA"
     gene            5987..6679
                     /locus_tag="WJJ54_001355"
     CDS             5987..6679
                     /locus_tag="WJJ54_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEZ7342217.1"
                     /translation="MTAFVHTLSDGMELTVEIKRRAKKNLIIRPAGTHTVRISVPPCF
                     SVSALNRWLYENEAVLRQTLAKTPPPQTAENRLPEHIWFHGRQLALTAHQDTQILLMP
                     SEILVPEGAPEKQLALLRDFLERQAHSYLIPRLERHARTTQLFPAPSSLTSAKTFWGV
                     CRKTTGIRFNWRLVGAPEYVADYVCIHELCHLAHADHSRAFWALTRLFAPYTPEAKQW
                     LKIHGRELFALG"
BASE COUNT         1751 a         2390 c         1724 g         1467 t
ORIGIN      
        1 aaaatacccg gctatcgtct cattttcgtt ttaatcagcc ataaaaatgc cgtctgaaac
       61 cctttcagac ggcatttctg tcaaacgccg gacacactca acccaaactc aatagcaggt
      121 tgcggaacgc gttcgggtct ttgataaacg tcatctcgcc ctcctgcgga aaatgaaaat
      181 ccaacaggcg cgacacccaa aaacggatgc agccggcgcg ttgggcggtc gggaaatacg
      241 ccttttcttc ggcactcaag gggcgcacgc cctcataacc gccgataaac gcctttttca
      301 acgcctcatc caacttattg tccgccgtcc ttacccaatc gttgaccgca atcgccaagt
      361 catacataaa attgccccgg caggcataat agaaatcgat gaaacccgat acctgaccgc
      421 cgtcaagcaa cacattatcc ttgaacaaat cggcgtggat gatgcccgaa ggcagatggt
      481 tgccgagatt gtccttcagc gcatcgattt cggaacacag cagcgcggca tcgtctcgcg
      541 gcaggacggg cagcagtcgg gcgcacgcct ctgtccacca cgcatcataa cgcgggtttt
      601 ccatttccaa agggaaatcg gcggcggcaa ggtgcatttt cgccaacatc gcgccggtat
      661 ggaaacactg ttccgccgtc ggcagcgcgg tgtccgaacc tttcaggcag gcaaccaagc
      721 atgcgggctt gcccgccaaa acggaatcaa gccggccgtc tttgcgcgca accggcgcgg
      781 caaccgccac gcccttcata ctcaaatgcc ggttaagctc cagaaaaaac ggcagctctt
      841 cctgtttcaa cacttcaaac acggtcagca cataacgtcc cgaagtcgtc gtcagaaaat
      901 aattgctgtt ggtaatcccc tgcgcgatgc cctgcaggga aacaaattcc cccaaatcgt
      961 aaccgctcag gaagccgcgc atttcatcat cggaaacact ggtatagaca gacatatcaa
     1021 ctcacttgct caaaaacggg caaacccgcc gtcagaacgc cggacggcag gcaaacatat
     1081 aattcacatc ggtcgaatcg cacagggcat aagtttgcga caacacatgg taagtcatac
     1141 ccttcgtatc cgccacatcc aagcctgcct gacggcacat ccgcgccagc tcggcaggcg
     1201 cgatgaattt tttccagtcg tgcgtgcctt tggggacaaa cttcaacaga tattccgccg
     1261 ccacaatcag atgcaggtac gatttcgggt ttttattgat ggtggaaaaa aacaccatgc
     1321 cgtccggttt gaccagcttg gcacaagcac gcacgatggc ggcgggatcg gggacgtgtt
     1381 ccatcatttc catgcacgtt accacatcga acgagtgcgg ttccgcctcg gcaaggtctt
     1441 ccacgcggat acattcgtat tcgatatcgg cgacattgtt caaagccgcg tgcaggcggg
     1501 cggtttccag cgactgctcc gccatgtcga tacccttgac aaacgccgcg ccgcgccgcg
     1561 ccatgctttc cgcaaggatg ccgccgccgc agcccacgtc caaaacccgt ttgccgcaca
     1621 aatccgcgtg tccgtcgata taatcgagcc ggagcggatt gatgtcgtgc aaggttttga
     1681 actcgcccga cttgtcccac catttgtcgg caatccggct gaatttggcg atttccccct
     1741 catcgacatt atattttttg tcggacattt tccctcccat ctgacgaacc gcccactcca
     1801 aaacccaaga ttatactatg gaacacaatg ccgtctgaaa gccttttcgg gcggcgcggc
     1861 gcaaatgcct tacaaatcct tacactttac ggcataatgg cggctcgctt tttctggcag
     1921 aaagacaaaa tatgcccacc aaaacccctt cactgttcgg cggcgcgatg attatcgccg
     1981 gcacggtcat cggcgcaggt atgctcgcca acccgaccgc cacatccggc gtatggttta
     2041 ccggctcgct ggccgtgttg ctgtacacct ggttttctat gctttccagc ggcctgatga
     2101 ttttggaagt caacacccat tatccgcacg gcgcaagttt cgacacgatg gtcaaagacc
     2161 tgctcggacg cggctggaac atcatcaacg gcatcgccgt cgccttcgtt ttatacctgc
     2221 tcacctacgc ctacatcttc gttggcggcg acctgaccgc caaaggcatc ggcaacgcct
     2281 tgggcggcga cgtttcactc accgtcggac aactcgtctt cttcggcatt ctcgcctttt
     2341 gcgtatgggc atccgcacgc ttggtcgacc gattcaccag cgtcctcatc ggcggcatgg
     2401 tattaacctt tatttgggca accggcggcc tgattgccga tgccaaactg cccgtcctgt
     2461 tcgacaccca agcccccgtc ggcaccaact actggattta cgccgccacc gccctgcccg
     2521 tctgccttgc gtcattcggt ttccacggca acgtctccag cctgctcaaa tactttaaag
     2581 gcgacgcgcc caaagtggct aaatccatct ggacgggcac actgattgcg ctggtaattt
     2641 acgtcctctg gcaaaccgcc atccaaggca acctgccgcg caacgagttc gcccccgtga
     2701 ttgccgccga agggcaagtc tccgtcctca tcgaaaccct gtccaaattc gcccaaaccg
     2761 gcaatatgga taaaatattg tccctatttt cctacatggc gatcgccacc tcgtttttag
     2821 gtgtaacgct cggactcttc gactacatcg ccgacatctt caaatggaac gacagcgtgt
     2881 ccggccgcac caaaaccgcc gcgctgacct tcctgccgcc tctaatttcc tgcctgctct
     2941 tccccaccgg cttcgttacc gccatcggct acgtcggcct ggcggcaacc gtctggacag
     3001 gcatcatccc cgccatgctg ctctaccgtt cgcgccaaaa attcggcgca ggcaaaacct
     3061 ataaagttta cggcggcttg tggctgatgg tttgggtctt ccttttcggc atcatcaaca
     3121 tcgccgcaca ggtattgagc caaatggaac tcgtccccgt atttaaagga taaaggcaaa
     3181 atgccgtttg aagcccgccg gcggcttcag acggcattgc cgcaacaaac ggcaaccgta
     3241 ttccggcaca cagcgcatta ccctgcccct cacgcacaaa tcccgccccg acaaaccggg
     3301 acgcaaccat aaaggaacaa tgatgaagct caaaatagac attgcaacca acaacttcaa
     3361 acacggcggc ggcacggaac gctacacatt ggatttggta aagggtctga acagacaaaa
     3421 catcacaccg gccgtttatg cgacgaaatt tgatcacggc attcctgaat acgccatgat
     3481 cgaaccccat cttgtcgatc aacaccggac gctgaaaaaa ctacgctcat tcctcttttc
     3541 aagccggctc gctcaaacca gaaaaaacag tgccgccaaa ctgattgcct gccaccacgc
     3601 cgattacgcc gacctcctca tctgcggcgg cacacacttg ggctacctgc accatatggc
     3661 gcaaaaaccg aacctgctcg accgcctcgc catacgccgt aaccgcagca actacgccac
     3721 cgccaaactg attatggcgc attcccatat gatgcggcgc gaactggtcg gactgtacgg
     3781 cgttccccct gaaagaatcc aagtcgcccc cccccccgca gatacggaac gcttcttccc
     3841 gcaacccgga gaaactgccg acctgcgcgc caaatacggc tttgccgact atgaaaccgt
     3901 tttcctgttc ccatcgaccg gccacacgcg caaaggtctg gaactgcttg ccgacttttt
     3961 cgaacatacc ggcctgcccg tcaagctcgc cgttgtcggc tccccgctcc cccgccctat
     4021 gaaaaacgtc gtcgggctgg gcttctgcac cgatatgccc gaactctacc gcgccgccga
     4081 ctttaccatt atggcctccc tgtacgaacc cttcgggctg gtcggtgtcg aatccgtcct
     4141 atgcggcaca cgcgtcgtcc tctccgaaaa catggcatgt acagaggtga tgaacgaaga
     4201 agccggattc tttttctcac gccaaaaccc ggaaaccctg gcgcaagccg ttgcccaagc
     4261 cgtcagcctt aaaaaacagg gcggacaccg cctgtccgac ccgatgcgtg cactgaacta
     4321 caacccgtcc ctgtcgcacc acatcgaccg actgaccgac atactggcat ccgtataaca
     4381 aaatgccgtc tgaacgagtt ttcagacggc attgctgcgt tatagtggat taacaaaaat
     4441 caggacaagg caacgaagcc gcagacagta caaatagtac ggaaccgatt cactcggtgc
     4501 ttgagcacct tagagaatcg ttctctttga gctaaggtga ggtaacgccg tactggtttt
     4561 tgttaatcca ctatatcacg cggcacaggc gcatcactgc cgatatttca gtataatgcc
     4621 acccccgacc tgccccaatc caaaggaaac gcgatgaaac tcatcattct cgaccgcgac
     4681 ggcgtcatca atcaggaccg cgatgacttc gtcaaatccg ttgacgagtg gatacctgtc
     4741 gaaggcagca tggatgcggt ggcatttctg acgcaggcag gctacaccgt cgccgttgcc
     4801 accaaccaat ccggcatcgg gcgcaaatat tttaccgttc aaaaccttac cgaaatgcac
     4861 gccaaaatgc accgcctcgt ccgtcaggca ggcggcgaaa tcaacggcat ctggttctgc
     4921 ccgcacaccg atgccgacaa ctgcaactgc cgcaagccca aaccgggtat gattgaagac
     4981 atcatcggac gcttcaacgc ccaagcctcg gaaacctggc tggtcggcga cagcctgcgc
     5041 gatttgcagg caatcgatgc cgtcggcgga aaacccgcgc tggttctgac cggaaaaggc
     5101 aaaaaaacgc tctcccaaca cggacacgaa ttacccgaac acacacaggt tttcgatacc
     5161 ttgctcgatt tctcacaata catcatgcag gaaaacgccg caccgcaagc cgactgaaca
     5221 taccgcattt ccgacaaggc aaaaccatgc tcatcatccg caacctgatt tactggctga
     5281 tactctgttc caccctgatt ttcctctttc cctttatgct gctcgcctcg cctttccgag
     5341 acggggcgca caagatggcg cgggtctggg tcaaaatcct caacctctcg ctcaaacaca
     5401 tcgtcgggct caaataccgc atcatcggcg cggaaaacat ccccgaccgc cccgccgtca
     5461 tctgcgccaa acaccaaagc ggctgggaaa cgctcgccct tcaggacatt tttccgccgc
     5521 aggtttacgt tgccaaacgc gagttgttca aaatcccctt tttcggctgg ggcttgaaac
     5581 tggtcaaaac cataggcata gaccgcaaca accgccgcga agccaacgag cagctcataa
     5641 aacaggggtt ggcgcgcaaa aacgaaggct attggattac cattttcccc gaaggcacgc
     5701 gccttgcacc cggaaagcgc ggcaaataca aactcggcgg cgcgcgcatg gcgaaaatgt
     5761 ttgagatgga catcgtcccc gtcgccctca acagcggcga attttggccg aaaaactcct
     5821 ttctgaaata tccgggggaa atcaccgtcg tcatctgtcc gaccatcccg cacgcaagcg
     5881 gcagcgaagc cgaattgatg gaaaaatgcg aacacctcat cgaaacgcag cagccgctca
     5941 tttccggcgc aggcccgttt gccgccaaaa tgccgtctga aaccgcatga ccgcctttgt
     6001 ccacaccctt tcagacggca tggaactgac cgtcgaaatc aagcgccgtg ccaagaaaaa
     6061 cctgattatc cgccccgccg gcacacatac cgtccgcatc agcgtcccac cctgcttctc
     6121 cgtctccgct ctaaaccgct ggctgtatga aaacgaagcc gtcctgcggc aaacactggc
     6181 gaaaacaccg ccgccgcaaa ctgccgaaaa ccggctgccc gaacatatct ggttccacgg
     6241 cagacagctt gccctcaccg cccatcaaga cacgcaaatc ctgctgatgc cgtctgaaat
     6301 cctcgtcccc gaaggcgcac ccgaaaaaca gcttgcgctg ctgcgggact ttttggaacg
     6361 gcaggcgcac agttacctga ttccccgcct cgaacgccac gcccgcacca cacaactgtt
     6421 ccccgccccc tcctcgctga cctctgccaa aaccttttgg ggcgtgtgcc gcaaaaccac
     6481 aggcatacgc ttcaactggc ggctggtcgg cgcaccggaa tacgttgccg actatgtctg
     6541 catacacgaa ctctgccacc tcgcccacgc cgaccacagc cgcgcgttct gggcactgac
     6601 ccgcctcttc gcaccctaca cgcccgaagc gaaacagtgg ctcaaaatcc acggcaggga
     6661 acttttcgcc ttaggctgac gcggcccggg caggcatccg ccaattcaga cctcctccca
     6721 aacggacatc cggaaagcag catcacagcc ggcgacacat accgctgccg ccgctttcag
     6781 acggcatccg tgccggaaca ggcacgcgcc cgcccgattc aaaccgcgat gacgctttgc
     6841 cgccggttcg gggcaggatg gcggcacaca cgccgtctgc cgcgtttcat ttcacaccgc
     6901 tcttccgaaa cccgaaaccc gcccggtccg acgtgcggta tgaaacgctt aagctgacgc
     6961 gaagtctttt actgatttgc ccgcgaaaat gccgtctgaa aggttttcgg acggcatttt
     7021 tttgcgtttc ccaggatggc ggcggattcg taaaaggcgg tcagggtgga ttgtaggatg
     7081 ggttgagacc tgccgaatcc gccgcatctg ccaaatctac cgccgtcatt cctacgaaag
     7141 tgggaatcta gaacgcgggg ttaagaaaac ctgcatcccg tcattcccac gaaagtggga
     7201 atccaggacg aaaaatctcc agaaaccgtt ttatccgata agtttccgca ccgacaaaac
     7261 tagattcccg cctgcgcggg aatgacgaat ccatccatac ggaaacctgc accgcgtcat
     7321 gcctacgaac ct
//
LOCUS       DAWKJW010000097         7273 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.097, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000097 DAWKJW010000000
VERSION     DAWKJW010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7273)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7273)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7273
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.097"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(149..505)
                     /locus_tag="WJJ54_001356"
     CDS             complement(149..505)
                     /locus_tag="WJJ54_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ7342218.1"
                     /translation="MASSNVNNEIKDKKLSLWAKRQDGSVKWFCGQPVTRTAKATDDD
                     VTAASDKQIDTKHLPSTCRDDSSTGCIETPRADFKHFQKISRHRVLPESRHMAEKLRH
                     SRAGGNLGLSAQKLIG"
     gene            complement(534..863)
                     /locus_tag="WJJ54_001357"
     CDS             complement(534..863)
                     /locus_tag="WJJ54_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ7342219.1"
                     /translation="MGSLIIEDLQEGFGKEAVKGKEITVHYTGWLENGTKFDSSLDRR
                     QPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGAHGAGGVIPPHATLIFEV
                     ELLKVYE"
     gene            complement(941..1159)
                     /locus_tag="WJJ54_001358"
     CDS             complement(941..1159)
                     /locus_tag="WJJ54_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HEZ7342220.1"
                     /translation="MLKTLTFAALHFSVAFSVTYVLTGSIGVSGAVALVEPLINTVVF
                     YFHEKAWNLYEKNKTVQQTQPFQLHRSS"
     gene            1281..2234
                     /locus_tag="WJJ54_001359"
     CDS             1281..2234
                     /locus_tag="WJJ54_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEZ7342221.1"
                     /translation="MNHKKIVVLDADTLPGRVFHFDFPHELAVYGTTGAAETAVRVCG
                     AHIVITNKVVISADIIADNPQLELIAVSATGVNNIDIEAAKAAGVAVCNVRAYGNESV
                     AEHAFMLMIALMRNLPAYQRDVAAGLWEKSPFFCHYGAPIRDLNGKTLAVFGRGNIGR
                     TLAGYAQAFGMRVVFAEHKHAPDVREGYVSFEDAVQTADVLSLHCPLNAQTENMIGEN
                     ELRQMKPGAVLINCGRGGLVDENALIAALKYGQIGGAGVDVLTEEPPKNGNPLLKAHL
                     PNLIVTPHTAWASREALDRLFDILLANIHAFVKGEAQNRVV"
     gene            complement(2309..4366)
                     /gene="metG"
                     /locus_tag="WJJ54_001360"
     CDS             complement(2309..4366)
                     /gene="metG"
                     /locus_tag="WJJ54_001360"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEZ7342222.1"
                     /translation="MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECY
                     YCCADDTHGTPVMLAAQKQGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQ
                     FSQDIYRALKANGKIESRVIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCG
                     TTYSPTELINPYSAVSGAKPELRESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPE
                     ALNKMKEWLGEGEETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNL
                     CDRIGIDFDEYFKAGSQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLT
                     VDGQKMSKSRGTFITAKSYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSD
                     LVGKYVNIAARASGFIAKRFEGRLKDVADSALLAKLAAESDTIAEQYENREYARALRD
                     IMALADAVNEYVDANKPWELAKQEGQDARLHEVCSELINAFTMLTAYLAPVLPQTAAN
                     AAKFLNLEAITWANTRETLGKHAINKYEHLMQRVEQKQVDDLIEANKQSIQTTPAPAA
                     EESQYEKVAEQASFDDFMKIDMRVAKVLNCEAVEGSTKLLKFDLDFGFEKRIIFSGIA
                     ASYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMILSAATADGKLKLLDVDAGAQPGD
                     KVG"
     gene            complement(4482..6320)
                     /gene="glmS"
                     /locus_tag="WJJ54_001361"
     CDS             complement(4482..6320)
                     /gene="glmS"
                     /locus_tag="WJJ54_001361"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEZ7342223.1"
                     /translation="MCGIVGAIRAHHNVVDFLTNGLKRLEYRGYDSSGIAVYSDGKIK
                     RVRRVGRVQLMEDAAREKHLNGSLGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGI
                     IENFESERKRLEDLGYRFESQTDTEVIAHSINHEYAQNGGRLFEAVQEAVKRFHGAYA
                     IAVIAQDKPDELVVARMGCPLLVALGDDETFIASDVSAVIAFTRRVAYLEDGDIALLA
                     SDGIKRLTDKNGLPAERKVKVSELSLASLELGPYSHFMQKEIHEQPRAIADTAEVFLD
                     GGLIPENFGKDAKSVFESIRSVKILACGTSYYAALTAKYWLESIAKIPADVEIASEYR
                     YRSVIADPDQLVITISQSGETLDTMEALKYAKSLGHRHSLSICNVMESALPRESSLVL
                     YTRAGAEIGVASTKAFTTQLVALFGLAVTLAKVRGLVSEEDEARYTEELRQLPGSVQH
                     ALNLEPQIAAWAQQFAKKTSALFLGRGIHYPIALEGALKLKEITYIHAEAYPAGELKH
                     GPLALVDENMPVVVIAPNDSLLDKVKANMQEVGARGGELFVFADLDSNFNATEGVHVI
                     RAPRHVGELSPVVHTIPVQLLAYHTALARGTDVDKPRNLAKSVTVE"
     gene            6602..7120
                     /locus_tag="WJJ54_001362"
     CDS             6602..7120
                     /locus_tag="WJJ54_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342224.1"
                     /translation="MKQMLWAVGVAAVLAGCGKDAGGYEGYWREKSDKKEGMIAVKKE
                     KGNYFLNKINVFTGKEESMLLSEKDGALSINTGIGEIPIKLSDDGKELYVERRQYVKT
                     DAAMKDKIIDHQKKCGQTEQAYRDARNALPSNQTYQQRQAAIEQLKRRFEAEFDELEK
                     KIKCNGKPTLLL"
BASE COUNT         1529 a         1725 c         2175 g         1844 t
ORIGIN      
        1 gggcggtaat gacgccgttt ttgacttcaa cgcttttaac atatttgcct ttgatgtcgg
       61 agggagtgga tgctatgtcg gcggcatcat taaatcccgt cattcccacg aaagtgggaa
      121 tctagaactc ggaaccggag aaaccttttt acccgataag tttctgtgcc gacaaaccta
      181 gattcccgcc tgcgcgggaa tgacgaagtt tttcggccat atgccgtgat tcaggtaata
      241 ctcggtgacg gctgattttt tggaagtgtt tgaagtcggc gcgtggtgtt tctatgcaac
      301 cggtagatga atcatcgcgg caggttgacg gcaggtgctt ggtgtcgatc tgcttgtcgc
      361 tggcggcggt aacgtcgtcg tcggtggctt tggcggtgcg cgtaaccggc tgtccgcaga
      421 accattttac cgaaccgtct tgacgcttgg cccacaggga gagttttttg tctttgattt
      481 cgttgtttac gttgcttgaa gccattatgt cagacggtat tgcccgggca gctttattcg
      541 tacactttca gcagctcgac ttcaaatatc aaagtggcgt gcggaggaat cacgccgccg
      601 gcgccgtgtg cgccgtagcc catttccgaa gggatggtca gcttgcgttt gccgccttcc
      661 ttcatgccgc cgaagccttc gtcccagcct ttgatgactt gtccgacgcc gagcgtgatg
      721 gtcagcggct ggcggcggtc gaggctggag tcgaatttgg ttccgttttc cagccaacct
      781 gtgtaatgca cggtaatctc tttgccttta actgcttctt ttccgaagcc ttcctgcaaa
      841 tcttcaataa tcaggctgcc catatttgtc ctttcgttgc ttgttggtca aaacggcaag
      901 ggtaacatac cgtccggcga agtcaaatgc cgctcaaacg tcagctgctc cggtgcagct
      961 gaaacggctg tgtttgttgg actgttttat ttttttcgta aaggttccat gctttttcat
     1021 ggaaatagaa aacgacggtg ttgattaggg gttcgaccag cgcaactgct cccgatacgc
     1081 ctatactgcc cgtcagtaca taggttacac tgaaggcgac gctgaaatgc agtgcggcaa
     1141 aagtcagggt tttaagcatc atcctctctc ggattggaca ttgacggagg gatgataaaa
     1201 attatcataa ggctgcgcgg tttaaatttg ctatttgttg ttagtgtaaa taaatcattt
     1261 ttcaaatagg tatagaaatt atgaatcata aaaagattgt tgttttggat gcggatactt
     1321 tgcccggccg ggtttttcat tttgattttc cgcacgagct tgcggtttac ggtacgacag
     1381 gtgctgcgga aacggcggta cgcgtatgcg gtgcgcacat cgtcatcacc aataaggttg
     1441 tcatttctgc cgatatcatt gcggataatc ctcagcttga gctgattgcc gtcagtgcga
     1501 ccggtgtgaa taatatcgat attgaggcgg cgaaggcggc gggcgttgcg gtatgcaatg
     1561 tccgcgcata cggaaacgaa tcggttgcgg aacacgcctt tatgctgatg attgcgttaa
     1621 tgcggaattt gcctgcctat cagcgtgatg ttgcggccgg tttgtgggaa aagtcgccgt
     1681 ttttctgcca ttacggcgcg ccgattcggg atttgaacgg taaaacgctg gcggttttcg
     1741 gacgcggcaa tatcggacgg acgctggccg gatacgcgca ggcgttcggt atgagggtgg
     1801 tgtttgccga acacaaacac gcgcccgacg tgcgcgaagg ctatgtttcc tttgaagatg
     1861 cggtacagac tgccgacgtg ttgtcgctgc actgtccgct gaacgcccaa actgaaaata
     1921 tgataggcga aaatgagttg cggcagatga agcccggcgc ggttttaatc aattgcgggc
     1981 gcggcgggct ggtggatgaa aacgcgctga ttgccgcact caaatacggg cagattggcg
     2041 gggcaggtgt cgatgttttg acggaggaac cgcccaaaaa cggcaatccc ttgctgaagg
     2101 ctcaccttcc caatctgatt gttacgccgc ataccgcgtg ggcaagtcgt gaagcgttgg
     2161 acaggctgtt tgatatattg ttggcgaaca ttcacgcctt tgtgaaagga gaggcgcaaa
     2221 accgcgtggt ttgagcttgt cgggatgacg gaaaacaatg ccgtctgaac gcccaaaggg
     2281 ttcagacggc attttttgag atttctactt aaccgacttt gtcgcccggt tgcgcgcctg
     2341 catccacatc taagagcttc agtttgccgt ctgccgtggc ggcactcaaa atcatgcctt
     2401 cggatacgcc gaattttgcc attttgcgcg gggcgaagtt ggcgacggcg atgaccatcc
     2461 ttccatttaa ctcggcaggg ttgggataag acgcggcgat gccggagaag ataatgcgtt
     2521 tttcaaaacc gaaatcgagg tcgaatttta agagtttggt gctgccttcg acggcttcgc
     2581 agttcaatac tttggcgacg cgcatgtcga ttttcataaa gtcgtcgaag cttgcctgtt
     2641 cggcaacttt ttcgtattga ctttcttcgg cggcaggtgc gggggtcgtc tgaatgcttt
     2701 gtttgttggc ttcgattaaa tcgtccactt gtttttgctc cactcgttgc attaaatgtt
     2761 cgtatttgtt gatggcgtgt ttgcccaagg tttcgcgtgt atttgcccaa gtgatggctt
     2821 ccaaattcag gaatttggcg gcgtttgcgg cggtttgcgg caagacgggg gcgaggtagg
     2881 cggtcagcat cgtaaaggcg ttgatgagtt cgctgcatac ttcgtgcagg cgtgcgtctt
     2941 ggccttcttg tttcgccagt tcccaaggtt tgttggcatc aacgtattcg ttcaccgcat
     3001 cagccaaagc cataatgtcg cgcagggcgc gggcgtattc gcggttttcg tattgctcgg
     3061 cgatggtgtc gctttcggct gcaagttttg ccagcaatgc gctgtcggcg acgtctttca
     3121 aacggccttc aaagcgtttg gcaatgaaac ctgacgcgcg ggcggcgatg ttgacgtatt
     3181 tgccgacgag gtcgctgttg acgcgcgaga taaagtcttg caggttcaaa tcgatgtctt
     3241 cgattttgct gttgagtttg gcggcgatgt agtagcgcat ccactcgggg tttaggcctt
     3301 gttccagata ggatttggcg gtaataaacg tgccgcgcga tttggacatt ttttgtccgt
     3361 ccacggtcaa aaagccgtgt gcgtacacgc cggtcggggc gcggtggccg gagaaatgca
     3421 gcatggcggg ccagaacagg gcgtggaaat agaggatgtc tttgccgatg aagtggtaca
     3481 tctcggtttg gctgccggct ttgaagtatt cgtcgaaatc gatgccgatg cggtcgcaca
     3541 ggtttttaaa cgatgccatg tagccgacgg gcgcgtccag ccagacgtag aagtatttgc
     3601 ccggcgcgtc ggggatttca aaaccgaaat acggcgcgtc gcgggaaatg tcccagtcgg
     3661 acagggtggt ttcttcgcct tcgcccagcc attctttcat tttgttgagg gcttctggtt
     3721 gcagatgggg tttgccgtcg tgcgggttgt tgccggaagt ccatgctttg aggaagtcgg
     3781 cgcattcgcc cagtttgaag aagaagtgtt cggattcgcg caattcgggt ttggcaccgg
     3841 aaacggcgga atacggatta atcagttcgg tcggggaata ggtcgtaccg cagacttcgc
     3901 agttgtcgcc gtactggtct tgggcgtggc atttcgggca ttcgcctttg acgaagcggt
     3961 cgggcaggaa catttgtttt tcggggtcga aaagctgctc gatgacgcgg ctctcaattt
     4021 tgccgttggc tttcagcgcg cggtagatgt cttgggaaaa ctgtttgttt tcaggggaat
     4081 gggtgctgta ataattgtcg tagccgatga aaaagccggt gaagtcggcg aggtgttctt
     4141 cgcgcacttt ggcaatcatg tcttcgggcg cgatgccttg tttttgcgcg gcaagcatca
     4201 cgggcgtgcc gtgggtgtcg tcggcgcagc agtagtagca ttcgttgccg cgcagttttt
     4261 gaaagcgcac ccaaacgtcg gtttggatgt gttcgaccat gtggccgagg tggatgctgc
     4321 cgttggcata gggcagggcg gaggtaacga ggattttgcg tgtcatattg tgctttgcaa
     4381 acaatgggta aaggcggatt ataccgcaaa tcaaacgggg aaatgccgtc tgaagcctga
     4441 aaaatcgggc ttcagacggc atttttgcca accggcggga tttattcgac ggttacggat
     4501 ttcgccagat tgcgcggctt gtccacatcc gtgccgcgtg cgagggcggt gtggtaggcg
     4561 aggagctgca cggggatggt atgcacgacg ggggacagtt cgccgacgtg gcgcggtgcg
     4621 cggataacgt gcacaccttc ggtggcatta aaattgctgt cgaggtcggc aaagacgaaa
     4681 agttcgccgc cgcgcgcgcc gacttcctgc atattggctt tgactttgtc caacaggctg
     4741 tcgttgggtg cgatgacgac gacgggcatg ttttcgtcca ccaaggcaag cggcccgtgc
     4801 ttcagttcgc cggcaggata ggcttcagcg tggatgtagg tgatttcctt cagttttaac
     4861 gcgccttcga gggcaatcgg gtaatggatg ccgcgcccca aaaacagcgc gctggttttc
     4921 ttggcaaact gttgcgccca ggcggcaatt tgcggttcga ggtttaaagc gtgctgcacg
     4981 ctgccgggaa gctggcggag ttcttcggtg taacgtgctt cgtcttcttc ggaaaccaaa
     5041 ccgcgcactt tcgccagcgt taccgccaaa ccgaacagcg caaccagctg cgtggtaaat
     5101 gctttggttg aggcgacacc gatttccgca ccggcacggg tataaagcac gaggctgctt
     5161 tcgcgcggca gggcggattc catcacgttg caaatggaga ggctgtggcg gtgtcccaac
     5221 gatttggcgt atttcaaagc ctccatcgtg tccagcgttt cgccggattg ggaaatggta
     5281 atgaccagtt ggtcggggtc ggcaatcacg ctgcggtatc ggtattcgct ggcgatttcg
     5341 acatcggccg ggattttggc gatggattcc aaccaatatt tggcggtcag cgcggcgtaa
     5401 taggacgtgc cgcaggcaag gattttgacg ctgcggatgc tttcaaacac gcttttggcg
     5461 tctttgccga agttttcggg gatgaggccg ccgtcgagga aaacttccgc cgtatccgca
     5521 atcgcgcgcg gctgctcgtg gatttccttt tgcataaagt ggctgtacgg tcccagttcc
     5581 aaagaggcga gcgagagttc ggataccttg actttgcgtt cggcaggcag gccgttttta
     5641 tcggtcagcc ttttaatgcc gtctgaagcc agcagtgcga tgtcgccgtc ttcgaggtac
     5701 gccacgcggc gcgtaaaggc gatgacggcg gacacgtccg aagcgataaa ggtttcatcg
     5761 tcgcccaaag cgaccaaaag cgggcagccc atacgcgcca caactaattc atcaggcttg
     5821 tcttgggcaa taaccgcgat ggcgtatgcg ccgtggaaac gtttgaccgc ttcctgtacc
     5881 gcttcaaaca gcctgccgcc gttttgcgcg tattcgtgat tgatgctgtg ggcgatgact
     5941 tcggtatccg tttgcgattc aaaacggtat cccaaatctt ccaagcgttt acgttcgctt
     6001 tcaaagtttt cgatgatgcc gttgtggacg acggcaatca taccgccgct gatgtgcggg
     6061 tgggcgttcg gctcggtaac gccgccgtgt gtcgcccagc gcgtatgccc gatgcccaaa
     6121 ctgccgttca aatgcttttc acgcgccgca tcttccatta actgcacgcg cccgacacgg
     6181 cgcacgcgct tgattttgcc gtctgaatac acggcgatgc ccgatgaatc gtaaccccgg
     6241 tattcgaggc gtttgaggcc gttggtcaga aaatcgacga cgttgtgatg ggcgcggatg
     6301 gcgccgacga taccgcacat gactgttcct tagtatccgg ttgaaaaaaa acaggcgcgg
     6361 acggctcccg tgccgcacct tccgcttcgg attataaacc gccttccgcg ccgaaaaaca
     6421 gcaaaatgcc gtctgaaggc ttgggcttgc tcaaaaaagg gagggatttc cccgcctgac
     6481 cgggatgggc gttcagacgg cattgcctgc tgccggttta tagtttttgc aaatcaatat
     6541 tgacaagctg aaaaaaaaaa acaatatact cgcccagtct taatgttaac ggagtatgga
     6601 aatgaaacaa atgctttggg ccgtcggcgt ggcggcggtg ttggcgggct gcggcaagga
     6661 tgccggcggt tacgagggtt attggcgtga aaagtcggac aaaaaagagg gtatgattgc
     6721 cgtcaaaaaa gaaaaaggca attacttcct taataaaatc aacgtgttta caggtaagga
     6781 agaatctatg cttttgtctg aaaaagacgg cgcgctttcg ataaacacgg ggatagggga
     6841 aatcccgatc aaactttccg acgacgggaa agagctgtat gtcgaacgca ggcagtatgt
     6901 gaaaaccgat gcggcgatga aggacaaaat catcgaccat cagaaaaagt gcggacaaac
     6961 ggaacaggca taccgcgacg cgcgaaatgc gttgccgtca aaccaaacgt atcagcagcg
     7021 tcaggcggcg atcgagcaat taaaacggcg gtttgaagcc gagtttgacg aattggaaaa
     7081 aaaaatcaaa tgcaacggca aaccgacatt gttgctttag cgtaggacaa ccgggaggat
     7141 gccgccgtcc gaatcggacg tgcggtttcc gtaccggtac gggcgggcag gaatgtccgc
     7201 tttttttgtt cggacgcgtt tgaatatccg tccgattccg tccgtttgca aagggtattt
     7261 ttgttcgggc gga
//
LOCUS       DAWKJW010000098         7232 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.098, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000098 DAWKJW010000000
VERSION     DAWKJW010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7232
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.098"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            28..1191
                     /gene="ctrB"
                     /locus_tag="WJJ54_001363"
     CDS             28..1191
                     /gene="ctrB"
                     /locus_tag="WJJ54_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export protein CtrB"
                     /protein_id="HEZ7342225.1"
                     /translation="MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVIS
                     LVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAILQGTGFARAQDDIYTVGEYMRSR
                     SSLDELRKILPVREFYETKGDVFSRFNGFGFRGEEEAFYQYYKDKLNINFDAISGIST
                     LNVTSFDALESKKINEALLKQGEALINQLNDRARSDTVRYAEEVVKTAEERVKETSQN
                     LTNYRISNGVFDLKAQSEVQMGLVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQARE
                     KSLRKEINQQLRAISGGGQSSLSNQAADYQRVYLENQLAEQQLAAAMTSLESAKAEAD
                     RQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN"
     gene            1191..1988
                     /locus_tag="WJJ54_001364"
     CDS             1191..1988
                     /locus_tag="WJJ54_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_157140410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ7342226.1"
                     /translation="MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFV
                     EPLLMTFVIVLMWKFLRADRYSTLNIVAFAITGYPMMMMWRNASNRSIGAISANASLL
                     YHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
                     AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHG
                     TEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEPQ"
     gene            1985..2635
                     /locus_tag="WJJ54_001365"
     CDS             1985..2635
                     /locus_tag="WJJ54_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ7342227.1"
                     /translation="MISVEHVSKQYQMRGGMRTVLDDINFSLQKGEKVGILGRNGAGK
                     STLIRLISGVEPPTSGEIKRTMSISWPLAFSGAFQGSLTGMDNLRFICRIYNVDIDYV
                     KAFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
                     CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMYQFEDMDKAYEYYNSLP"
     gene            2699..4972
                     /locus_tag="WJJ54_001366"
     CDS             2699..4972
                     /locus_tag="WJJ54_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HEZ7342228.1"
                     /translation="MNITQILSQELSATAAQITAAVELLDDGATVPFIARYRKEATGG
                     LDDTQLRRLAERLQYLRELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYL
                     PYKPKRRTKAQIAREHGLQPLADVLLAEQSQDVEAAAQGYLNENVPDAKAALDGARAI
                     LMEQFAEDAELIGTLRDKLWNEAEIHAQVVGGKETEGEKFSDYFDHREPIRAMPSHRA
                     LAVLRGRNEGVLNIALKYQPDDTPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRA
                     KIFLSLELEALNRLKEAADTDAITVFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCA
                     VVDDTGKLLDTVIVYLHQENNMLATLSRLIKQHGVKLIAIGNGTASRETDKIAGELVR
                     GMPEMGLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
                     PKSIGVGQYQHDVNQSQLAKSLDAVVEDCVNAVGVDVNTASAPLLARISGLNQTLAQN
                     IVAYRDENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGKEPLDASAVHPEAYPVVA
                     KMLAQQGITAAELISNRERVKQIKASDFTDERFGLPTILDILSELEKPGRDPRGAFQT
                     ASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPRE
                     VVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRND
                     RAPANSAMADAFAKLKR"
     gene            5003..6002
                     /gene="dcm"
                     /locus_tag="WJJ54_001367"
                     /pseudo
     CDS             5003..6002
                     /gene="dcm"
                     /locus_tag="WJJ54_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239422.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
     gene            5995..6339
                     /locus_tag="WJJ54_001368"
     CDS             5995..6339
                     /locus_tag="WJJ54_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HEZ7342229.1"
                     /translation="MNKQYPKINYIGNKEKIASWICDQLPSDVDTVADVFSGGCSFAY
                     EAKKRGYRVITNDILAINYQIALALIANNHETLNDDDVAMIFSGSPHAGFMSQRYAEK
                     FYFHDEYQQLDL"
     gene            6382..7038
                     /gene="galE"
                     /locus_tag="WJJ54_001369"
     CDS             6382..7038
                     /gene="galE"
                     /locus_tag="WJJ54_001369"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEZ7342230.1"
                     /translation="MAFTLMRRAMIRKMPYTEDMRPGDTANPYGASKAMVERMLTDIQ
                     KADPRWSVILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVASGRLPQLSVFGGDY
                     PTPDGTGMRDYIHVMDLAEGHIAAMKAKGGVAGVHLFNLGSGRAYSVLEIIRAFEAAS
                     GLNIPYQIQPRRAGDLACSFADPSHTKQQTGWETKRGLQQMMEDSWRWVSRNPNGYGD
                     "
     gene            7039..>7232
                     /locus_tag="WJJ54_001370"
     CDS             7039..>7232
                     /locus_tag="WJJ54_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEZ7342231.1"
                     /translation="MQTANKKTILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAG
                     NLESLTDIADNPRYAFEQVD"
BASE COUNT         1879 a         1691 c         1840 g         1822 t
ORIGIN      
        1 tttaactaat taatgtgagt aattaagatg tctgagcaac ttcctgtggc agttgccact
       61 gaaaccaaag ccgagcgtaa aaagccgaaa aagaaaagtt ggattaaaaa gctaagccct
      121 ttattttggg taacggtgat tatccctacg gtaatttcgt tggtgtattt cggcttcttc
      181 gcttccgatc gttttacgtc gcaatcgagc tttgtggtgc gctcgcctaa aagccaatct
      241 tctctcaatg gcctgggtgc cattttgcag ggcacaggtt ttgcccgtgc gcaagatgat
      301 atttacacgg ttggggagta tatgcgttcg cgctcgtctt tggatgaact gcgtaaaatc
      361 ttgccggtgc gtgaatttta tgaaactaag ggcgatgtat ttagccgatt taatggtttt
      421 ggattccgtg gtgaggaaga ggctttttat caatactata aagataagct gaacattaat
      481 tttgatgcga tttcaggtat ctctacgctt aacgttacat catttgatgc gcttgaatct
      541 aagaaaatca atgaagcttt gttaaaacag ggcgaagcat tgattaacca gctgaatgat
      601 cgtgcgcgct ctgatacagt gcgttatgcg gaagaagtgg tgaaaactgc tgaagagcgt
      661 gtgaaagaaa cttcacagaa tctgactaat taccgcattt ctaatggtgt ttttgacttg
      721 aaagcgcaat cagaggtaca gatgggcttg gtatccaagc tgcaagatga gttgattgtg
      781 attcaaaccc agcttgatca ggtgaaagca gttacgccag aaaacccgca aattccaggt
      841 ttgcaggcac gtgagaagag cttacgcaaa gaaattaacc aacagttacg tgccatttcg
      901 ggtggtgggc aatcatcatt atcaaatcaa gcagctgatt atcagcgcgt ttatttggaa
      961 aatcaattag ctgagcagca attggcagcg gccatgactt ctctggaaag cgctaaagct
     1021 gaagctgatc gccagcagct ttatttagaa gtgatttctc agccgagcct gccggatttg
     1081 gcgcatgaac ctaaacggtt atacaacatt gttgccactc tgattatcgg cttgatggtt
     1141 tatggtattt tgagcctgtt gactgccagc attcgtgagc ataaaaactg atgaaagcct
     1201 tgcataaaac atcattttgg gaatctttgg ctattcaaag gcgcgtgatc ggcgcgcttt
     1261 tgatgcggga aattatcacc cgttacggtc gcaataatat tggcttttta tggctgtttg
     1321 ttgaaccgtt gctgatgaca ttcgttattg tcttgatgtg gaaattttta agggcagacc
     1381 gatattcaac tttgaatatt gtggcgtttg cgattaccgg ttatccaatg atgatgatgt
     1441 ggcgtaatgc ctctaatcga tcaattggtg ccatttctgc taatgccagc ctgctttatc
     1501 accgcaatgt aagagttttg gataccattt tggcgcgcat gattttggaa attgctggtg
     1561 caaccattgc gcagattgtg attatggcgg tattgattgc gattggctgg attgaaatgc
     1621 cggcagatat gttttatatg ctgatggctt ggcttttgat ggcttttttt gcgattggtt
     1681 tgggtttggt gatttgttcg attgccttta atttcgagcc gtttggcaag atttggggca
     1741 cattgacttt tgtgatgatg ccgttatccg gtgcgttctt ttttgtgcat aatttgccgc
     1801 ccaaggtaca agaatatgca ttaatgattc cgatggtgca tggcacagaa atgttccgtg
     1861 ccggatattt tggcagcgat gtaattacct atgaaaatcc ttggtatatc gtattgtgca
     1921 atctggtgtt gttgttgttt ggcttggcga tggtcagtaa attcagtaaa ggagtcgagc
     1981 cgcaatgatt tcggttgaac atgtttccaa gcagtatcaa atgcgcggcg gtatgcggac
     2041 ggtgttagac gatatcaatt tttcgctgca aaagggtgag aaagttggta ttttgggtcg
     2101 aaacggtgca ggtaaatcga cgttgatccg tttgattagt ggtgtcgagc cgcctacctc
     2161 gggcgaaatc aagcgaacca tgagtatttc ttggccgctg gcgttttctg gtgccttcca
     2221 aggaagcctg accgggatgg ataatctgcg ttttatctgc cggatttata atgtcgatat
     2281 cgattatgtg aaagcgttta cggaagaatt ttcggagctg gggcaatatt tgtatgagcc
     2341 ggtgaaacgc tattcttcag gtatgaaagc gcgtttggct tttgcgctgt cgttggcggt
     2401 ggagtttgac tgttacctga ttgacgaagt gattgcagtt ggtgactcgc gttttgccga
     2461 taaatgtaag tacgagttgt ttgaaaagcg caaagaccgt tccatcatct tggtgtcgca
     2521 cagccacagc gccatgaagc aatattgcga taatgcgatg gtgctggaaa aagggcatat
     2581 gtaccagttt gaagatatgg acaaagccta cgaatattat aattcgctgc cttaaagcga
     2641 ttgtttttaa atcaggccgt ctgaaatttc agacggcctg tccgttggaa ttctattgat
     2701 gaacattact caaattcttt cccaagaact ctccgcgact gccgcgcaaa tcaccgccgc
     2761 cgtcgagctt ttggacgacg gcgcgaccgt gccgtttatc gcccgctacc gcaaggaagc
     2821 gacgggcggg ttggacgata cgcagttgcg ccggcttgcc gagcggctgc aatatctgcg
     2881 cgagttggaa gagcgcaaag ccgttgtttt aaaaagcatt gaagagcaag gcaagctttc
     2941 agacgacctc agggcgcaaa tcgaagccgc cgataacaaa accgcgctgg aagacctgta
     3001 tctgccctac aaacccaaac gccgcaccaa agcgcaaatc gcgcgcgaac acggtttgca
     3061 gccgctggcg gacgtgttgc ttgccgagca gtcgcaggac gtggaagccg ccgcacaagg
     3121 ctacctgaac gaaaacgtcc ccgatgccaa agccgcgttg gacggcgcgc gtgcgattct
     3181 gatggagcag tttgccgaag acgcggaact catcggcacg ctgcgcgaca agctgtggaa
     3241 cgaagccgaa atccacgcgc aagttgttgg aggcaaagaa accgaaggcg aaaaattcag
     3301 cgattatttt gaccaccgcg aacctattcg tgcgatgccc agccatcgtg cgctggcggt
     3361 tttgcgcgga cgcaacgaag gcgtgttgaa catcgcgctc aaatatcagc ccgacgacac
     3421 gccgattacg cagcaaagcg aatacgagca aatcatcgcc cgccgcttca aagtttcaga
     3481 cggccacaaa tggctgcgcg acaccgtgcg cctgacttgg cgcgcgaaaa tctttttgtc
     3541 gttggaactt gaagctctca atcgtttgaa agaagccgcc gacaccgacg cgattaccgt
     3601 gttcgcccgc aatctcaaag acttgctgct tgctgcgccc gccggacggc tgaccacgct
     3661 gggtctcgac cccggctacc gcaacggcgt gaaatgcgcc gtggtggacg acaccggcaa
     3721 gctgctggat accgtcatcg tctatttgca tcaagaaaac aatatgttgg caacgctgtc
     3781 gcgcctgatt aaacagcacg gcgtgaagct catcgccatc ggtaacggca ccgccagccg
     3841 cgaaaccgac aaaatcgcgg gcgaactggt gcgcggaatg ccggaaatgg ggctgcacaa
     3901 aatcgtcgtt tccgaagccg gcgcatcgat ttattccgcg tccgaactgg cggcgcgcga
     3961 gttccccgac ttggacgttt ccctgcgcgg cgcggtgtcc atcgcccgca ggctacaaga
     4021 cccgcttgcc gagttggtca aaatcgaccc caaatccatc ggcgtgggac agtatcagca
     4081 cgacgtgaac caaagccagc tcgccaaatc gctggacgcg gtggtcgaag actgcgtgaa
     4141 cgccgtcggc gtggacgtga acaccgcctc cgccccgctc ttggcgcgaa tttccggttt
     4201 gaatcaaacc cttgcccaaa acatcgttgc ctaccgcgat gaaaacggcg cgttcgacag
     4261 ccgcaaaaaa ttgctgaaag taccgcgttt gggcgaaaaa accttcgagc aggcggcagg
     4321 ctttttgcgg attaacggcg gcaaagagcc gctggacgcg agcgcggtgc atcccgaagc
     4381 ctatcccgtc gttgccaaaa tgctggcgca acaaggcatt accgccgccg aactcatcag
     4441 caaccgcgag cgcgtgaagc aaatcaaagc gtccgacttc accgacgaac gcttcggcct
     4501 gccgaccatt ctggacatcc tgtccgagct ggaaaaaccc ggccgagacc cgcgcggcgc
     4561 gtttcagacg gcatcgtttg ccgaaggcat ccacgaaatc agcgacttgc aagtcggtat
     4621 gatactcgaa ggcgtggttt ccaacgtcgc caacttcggc gcgttcgtgg acatcggcgt
     4681 ccatcaggac ggcttggtgc acatctccgc cctatccaat aaattcgtcc aagacccgcg
     4741 cgaagtcgtg aaagccggcg acgtggtgaa agtgaaagtg ctggaagtcg atgccgcacg
     4801 caaacgcatc gcgctgacca tgcgcttgga tgacgaaccg ggcggcgcaa aacataaaat
     4861 gccgtctgaa aaccgcagcc gcgaacggac agccggccgc aaaccccaac gcaacgaccg
     4921 cgccccagcc aattcggcga tggcggatgc gtttgcgaag ctgaagcggt aaaataatcg
     4981 aagagtttat ggattttgac ttatgcacac accacttacc tatattgacc ttttctcagg
     5041 agcaggaggc ctatccttgg gttttgaaca agccggattc caacaattgc tttctgttga
     5101 aatggagtct gattattgtc agacttaccg taccaacttc ccccatcatc aattactgca
     5161 aaaagattta accacactaa ccgaacaaga tttaatcaat tgtcttaacg gacaagcagt
     5221 tgatttgatt attggaggac caccttgtca aggttttagt atggcaggaa agattggacg
     5281 gacatttaca gatgacccac gcaaccattt atttaaagag tttgtccgaa tagttaaaat
     5341 tgtccaacca tatttttttg ttatggaaaa tgtagcgcga ctctatacac acaattcagg
     5401 taaaacacgt attgagatta ttcaagcatt tcagaatatc ggttattcgg tggaatgtaa
     5461 gatactgagt gcagccgatt tcggtgttcc tcagatacgt agccgagtga tatttatcgg
     5521 gaggagggat aaaggcaaaa tttcctttcc cgaacctttg cagatttccc atcagactgt
     5581 tggatcagca ataggacatt ttccaaaact ggctgctggc gaaagcaatc cacacgttgc
     5641 aaatcatgaa gctatgaatc attcggcaca aatgttagaa aaaatggcat ttgttaaaaa
     5701 tggaggtaac cgtaacgata ttcctgaacc attacgtccg aaaacaggtg atatccgtaa
     5761 atacatccgt tacaacagca acaaaaccag ccgtttgtat tacaggagat atgcgcaaag
     5821 tttttcacta tgaacagaat cgggcgttaa ccgttcgtga attagctgcc ttacaatctt
     5881 tccctgataa ttttattttt tgcggcagca aaattgccca gcagcaggtt ggtaacgccg
     5941 taccgccttt attggcaaaa gctattgctg aaagtatttt aaaaatgagt gaaaatgaat
     6001 aagcaatatc cgaaaattaa ctatatcggt aataaagaga aaatagcttc ctggatttgt
     6061 gaccagcttc cgtctgatgt agatacagtt gcagatgtat ttagtggagg ctgttccttt
     6121 gcctacgaag ccaaaaaacg cggctatcgt gtgattacta acgatatttt ggcaattaat
     6181 taccaaattg ctttagcatt aatagcaaac aaccatgaaa cattaaatga cgatgatgtc
     6241 gcaatgattt tttcaggcag cccgcatgcc ggttttatga gtcagcgtta tgccgaaaaa
     6301 ttctattttc acgatgaata ccaacaactt gatttgtaac gtaaaaatat agggaaactg
     6361 gataaccagt ataaacgcgc tttggcgttt actttaatgc gtcgcgccat gatacgtaaa
     6421 atgccctata cggaagatat gcgcccgggc gataccgcta atccttatgg cgcatccaaa
     6481 gcgatggtgg aacggatgtt aaccgacatc caaaaggccg atccgcgttg gagcgtgatt
     6541 ttgttgcgct atttcaaccc gattggggcg cacgaaagcg gcttgatcgg cgaacagccc
     6601 aacggtattc ccaacaacct tttgccctat atctgccaag tggcttcggg caggctgccg
     6661 caactgtcgg tattcggcgg cgattatccg acccccgacg gtacgggaat gcgcgactac
     6721 attcatgtga tggatttggc agaagggcat atcgcggcaa tgaaggcaaa aggcggcgtt
     6781 gccggcgtac atttgttcaa cttgggttcg gggcgcgcct attccgtttt ggaaatcatc
     6841 cgtgcctttg aagccgcatc cggcttaaat attccctatc aaatccaacc ccgacgcgcc
     6901 ggagacttgg cgtgttcctt tgccgacccg tcccatacca aacaacaaac cggctgggaa
     6961 accaaacgcg gcttgcagca aatgatggaa gattcgtggc gttgggtcag ccgcaacccc
     7021 aacggatatg gggattaaat gcaaaccgca aacaaaaaaa ccatccttgt taccggcggt
     7081 gcgggcttta tcggttctgc cgttgtccgt catattatcc gaaacaccca agattccgtc
     7141 gtcaacctcg acaaactgac ctacgcgggc aatctcgaat cgctgaccga cattgccgat
     7201 aatccccgct atgcttttga gcaagtggat at
//
LOCUS       DAWKJW010000099         7086 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.099, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000099 DAWKJW010000000
VERSION     DAWKJW010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7086)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7086)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7086
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.099"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(66..425)
                     /gene="rnpB"
                     /locus_tag="WJJ54_001371"
     ncRNA           complement(66..425)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="WJJ54_001371"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(504..1607)
                     /gene="prfB"
                     /locus_tag="WJJ54_001372"
     CDS             complement(504..1607)
                     /gene="prfB"
                     /locus_tag="WJJ54_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEZ7342232.1"
                     /translation="MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVIGLSE
                     DPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQ
                     EDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAER
                     KGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTS
                     FASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC
                     QNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR
                     IKDLRTGYEVGNTKAVLDGDLDGFIEASLKQGV"
     gene            complement(1710..2603)
                     /locus_tag="WJJ54_001373"
     CDS             complement(1710..2603)
                     /locus_tag="WJJ54_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEZ7342233.1"
                     /translation="MVTFSKIRPLLAIAAAALLAACGTAGNNAARKLVQTAKPAAVVG
                     LALGGGASKGFAHVGIIKVLKENGIPVKVVTGTSAGSIVGSLFASGMSPDRLELEAEI
                     LGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRQIQQFPIKFAAVATDFETGKAVAFN
                     QGNAGQAVRASAAIPNVFQPVIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISAR
                     PGKNISQGFFSYLDQTLNVMSVSALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIRL
                     GEEAARAALPEIKRKLAAYRY"
     gene            2945..3394
                     /locus_tag="WJJ54_001374"
     CDS             2945..3394
                     /locus_tag="WJJ54_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEZ7342234.1"
                     /translation="MKIGTTWQTASAMLVLRLFAAYEFLESGLQKWNGENWFSEINDQ
                     FPFPFNLLPDALNWNLAMYAELLLPVLLLLGLATRLSALGLMVVTAVAWAAVHAGSGY
                     NVCDNGYKMALIYIVVLIPLLFQGAGGWSLDTLLKKRFCPRCRLKQD"
     gene            3468..3776
                     /locus_tag="WJJ54_001375"
     CDS             3468..3776
                     /locus_tag="WJJ54_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342235.1"
                     /translation="MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGA
                     SKSAEGSCGAAGSKAGEGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSK
                     "
     gene            3892..4734
                     /locus_tag="WJJ54_001376"
     CDS             3892..4734
                     /locus_tag="WJJ54_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HEZ7342236.1"
                     /translation="MIQHAGLGYRRDLAEDFLSLSENSPICFIEAAPENWLKMGGWAR
                     KQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMRRYDCTFFSDHLSYCHDGG
                     HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAV
                     AREADCGIHLDVNNIYVNAVNHGLLSPEAFLKNVDAERVCYIHIAGHDVETPELLIDT
                     HGAAVLPTVWDLLELAYAKLPTIPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEY
                     RRAA"
     gene            4724..5470
                     /locus_tag="WJJ54_001377"
     CDS             4724..5470
                     /locus_tag="WJJ54_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2063 domain-containing protein"
                     /protein_id="HEZ7342237.1"
                     /translation="MQPETSAQYQHRFAQAIRGGEAADGLPQDRLNVYIRLIRNNIHS
                     FIDRCYTETRQYFDSEEWSRLKEGFVRDAHAQTPYFQEIPGEFLQYCQSLPLLDGILA
                     LMDFEYTQLLAEVAQIPDIPDIHYSNDSKYTPSPAAFIRQYRYDVTDDLHEAETALLI
                     WRNAEDDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPEDDNWKNILLGKWSG
                     WTEQRIIIPSLSAISENMEGNSPGQNHLSA"
     gene            5492..6079
                     /locus_tag="WJJ54_001378"
     CDS             5492..6079
                     /locus_tag="WJJ54_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEZ7342238.1"
                     /translation="MPLPDLTDAELIESRKLLLHFARLQLPDHPDLAEDLVQETLLSA
                     YSAGDSFQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTTLDDELLDEAFESHFSQN
                     GHWTPEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEILGFSSDEIQQ
                     MCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK"
     gene            6085..6264
                     /locus_tag="WJJ54_001379"
     CDS             6085..6264
                     /locus_tag="WJJ54_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEZ7342239.1"
                     /translation="MKKCRDIALLLSKHQDRETTPGEKISIYTHLLFCPHCREYKRQL
                     QTIKISLAKTTRTSK"
     gene            6496..6936
                     /locus_tag="WJJ54_001380"
     CDS             6496..6936
                     /locus_tag="WJJ54_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342240.1"
                     /translation="MIKETLMRPIFLSFVLLPILITACSTPDKSARWENIGTISNGNI
                     HTYINKDSVRKNGNLMIFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSS
                     LQLFDTKNTEISTQNYTASSLRPMSILSGTLTEKQYETVCGKKL"
BASE COUNT         1804 a         1888 c         1620 g         1774 t
ORIGIN      
        1 caacctaaat aaaaatgccg tctgaaccat atttcaggtt tcagacggca tttgcgtgtc
       61 ggatgcacac cggacaggcg gtaagccggg ttctgtctcg gacagtcatt cctctaggca
      121 taccgttacc ggtatgctca agcaacctac ccgaacgctc ggcgggcagc gtcattgcgt
      181 tctgtttggt cttgctccga atggggtttg gcctgccgca tattgttacc aaatgcgcgg
      241 tgcgccctta ccgcaccttt tcacccttgc ctgtgctgcc aaagcagcca tcggcggttt
      301 tgctttctgt tccactttcc gtcgcgttac cgcgcccggc cgttaaccgg cattctaccc
      361 tgcggagccc ggactttcct ccccgtatgc cttacgcgat acgcggcgac tgtctgcccg
      421 tcccgtgtgc ggcgcggatt ataacacgaa acgcaaaaat gccgtctgaa acggtacagg
      481 tttcagacgg catacagcct aaactacacg ccctgtttca ggctggcttc gataaagccg
      541 tccaagtcgc catccaatac ggctttggtg ttgccgactt cgtagcctgt gcgcaagtct
      601 ttgatacgtg aggaatccaa aacatacgaa cggatttggc tgccccaacc tacatcggat
      661 ttaccttctt ccaacgcctg tttctcttcg ttgcgtttgc gcatttccaa ttcatacagt
      721 ttggatttca acatttccat cgcggccgct ttgttggcgt gttgcgaacg gtcgttttga
      781 cattgcacca caatccccgt cggctcgtgg gtaatgcgca cggcggagtc ggttttattg
      841 atgtgctgac cgcccgcacc cgatgcgcga taggtgtcga tgcgcaaatc ggcggggttg
      901 atttcgattt cgatggaatc gtcgatttca gggtaaacga acacggaggc aaacgaggta
      961 tggcgtttgt tgttcgagtc aaacggtgaa tagcgcacca agcggtgaac gccggtttcg
     1021 gtacgcagca aaccataagc gtattcgcct tccactcgga tagtcgcacg gttgatgcct
     1081 gcgatttcgc cgtcgtcttc ttcgaggatt tcgattttga agcctttgcg ctcggcgtag
     1141 cggctgtaca tgcggaacag catacccgcc cagtcttccg cttccgtacc gcccgcgcct
     1201 gcggtgatgt cgataaagca gttgttcggg tcggcgggct ggttgaacat ccgtttgaac
     1261 tccaaatccg ccatctgttt ttccagcccc gccacatctt cctgtacggc ggcaaaacct
     1321 tcttcgtcgt tttcttcgac ggtcatttca atcagcatgc ggttgtcttc gatgcccgaa
     1381 gcgatgttgt cgagcgtcaa cacgatgcct tcgaggattt tgcgctcttt gccgatttct
     1441 tgggcgcgtt tcgggtcgtt ccaaagttcg gggtcttcgg aaagaccgat aacttcttcc
     1501 aatcggtctt tcttaccctg ataatccata taaactcgga tgtcttcgct gcgcttttcc
     1561 aaatcattca gggtattgtt gagctggttg attacttcgg cttccatgat tcttttgttc
     1621 tttcaaaatt ttaggggcgt attgtacggg attcgggtat ttttttctat ggataaagcc
     1681 ttctggaaac acgttcagac ggcatagcgt caataacggt atgccgccag tttgcgtttg
     1741 atttcaggca atgcggcacg cgctgcctcc tcgcccaacc gaatagcgcg ttttttctga
     1801 tcgaaaccgc cgactgcacc caaatccaaa acctgtggtt tgataaccac atccgcctgc
     1861 cccaactcat tttgcaacgc agaaacgctc attacgttca gcgtctgatc gagataagag
     1921 aagaaacctt ggctgatgtt tttgcccgga cgggcggaaa tatcgacggc aatcacgaaa
     1981 ttcgccccct gccgccgggc ggcactgacg ggcacgggct gcgacagacc gccgtcaaca
     2041 tatgtatgcc tgccgatgat aacgggttgg aacacattgg gaatggcggc ggaagcgcgc
     2101 acagcctgcc cggcattccc ctgattgaaa gcgacggcct tgccggtttc aaaatcagta
     2161 gcaacggcgg caaatttgat gggaaactgc tgaatctgcc tgccgccgac ttttcggttg
     2221 atgtaatttt gcagcttttc gcctttgata aaaccactgg tggacaaggt taaatcgacc
     2281 aaatcggttt tgcctaaaat ttcggcttcc aattcgaggc ggtcgggcga catacccgat
     2341 gcaaaaaggc tgccgacaat cgaacctgcc gatgtaccgg taaccacctt cacaggaata
     2401 ccgttttctt tcaaaacctt aataatacct acatgggcaa atcctttaga tgcgccgcca
     2461 ccgagtgcca aaccgaccac tgcggcgggt ttggcggttt gcaccagctt gcgggcagca
     2521 ttatttcccg ccgtgccgca ggcggcaagc aacgcggcgg cggcgattgc caaaagcggt
     2581 ctgatttttg aaaacgttac catattttcc attcctttat atatcgcacc ccgtcaaaaa
     2641 gagggattgc ttttcttaac aacccccttt gacagccaag caaatggggg ctttgttaag
     2701 tcatcatcaa aattaatatt tctttttttc ctttacggaa attatatttg aaggcatact
     2761 atccaaggtg ggaattatct cacaacaccg ccgttatcca aatatcccgc ctttttccct
     2821 tcctttccat caaaatactt tctttttata ttcattaact tgttaaatca ttggctgccg
     2881 ggtgtcagtt tttccgacaa aatccgtcta atggggtatc aacagaacca aaacaggaac
     2941 acttatgaaa atcggaacaa cttggcagac ggcatccgct atgctggttt tgcgtctgtt
     3001 tgccgcatat gaatttttgg aatcgggttt gcaaaaatgg aacggggaga attggttttc
     3061 tgaaatcaac gatcaattcc cattcccgtt caacttgctg ccggacgcgt taaactggaa
     3121 tctcgctatg tatgcggagc ttttactgcc cgtactgttg cttttgggtt tggcaacgcg
     3181 tctgtcggca ttagggctga tggtcgttac cgccgtcgct tgggctgcgg ttcacgccgg
     3241 ttcgggttac aatgtctgcg acaacggtta taaaatggct ttaatttata tcgtggtatt
     3301 aatcccgctg cttttccagg gtgcgggcgg atggtcgctg gatacgctgc tgaaaaaacg
     3361 gttttgcccc cgatgccgtc tgaagcaaga ttgattcagt cgtggaatct gactttaaac
     3421 attccaacct tatctcgtta acttgatatt ctgaaaagga aatagaaatg aacaaaaaca
     3481 ttgctgccgc actcgccggt gctttatccc tgtctttggc cgccggtgca gtggctgcca
     3541 acaaaccggc aagcaacgca acaggcgttc ataaatccgc ccatggctct tgcggcgcgt
     3601 ccaaatctgc cgaaggttcg tgcggcgcgg ctggttctaa agcaggcgaa ggcaaatgcg
     3661 gcgagggcaa atgcggtgcg accgtaaaaa aaacccacaa acacaccaaa gcatctaaag
     3721 ccaaggccaa atctgccgaa ggcaaatgcg gcgaaggcaa atgcggttct aaataatccc
     3781 accccttcaa accaagccgc gtttttcagt aaaatgcggc ttttttaacg gcaaacaaag
     3841 attttttaac aagcacatca ttcttttgtg ccatccgaac cgggtaaaaa tatgattcaa
     3901 cacgcaggct tgggctaccg ccgcgacttg gcggaagact ttctctcgct ttccgaaaac
     3961 agcccgatat gctttatcga agccgcaccg gaaaactggc tgaaaatggg cggctgggcg
     4021 cgcaaacagt ttgaccgtgt ggcggaacgg ctgccgctgg cgttgcacgg attgtctatg
     4081 tcgctgggcg ggcaagcacc gctggatact gatttgatag acggcatcaa agaaatgatg
     4141 cgccgttacg attgcacgtt tttctccgac catttgagct actgccacga cggcggtcat
     4201 ctttacgatt tgttgccgct gcccttcacc gaggaaatgg tgcatcatac ggcgcggcgt
     4261 atccgtgaag tgcaagaccg tttgggctgc cgcatcgccg tggaaaacac gtcctactat
     4321 ctgcattccc cgcttgccga gatgaacgag gtcgagttcc tcaacgccgt cgcacgtgag
     4381 gccgattgcg gcattcatct ggatgtgaac aatatctacg tcaacgccgt caatcacggt
     4441 ctgctgtcgc cggaggcttt tttgaaaaac gttgacgcag agcgcgtgtg ctatatccat
     4501 attgccggac atgacgtgga aacgccggaa ttgttgattg atacacatgg cgcggcagtt
     4561 ttgccgactg tttgggactt gctcgaactt gcctatgcca agctgccgac gattccgccc
     4621 accctgttgg aacgcgattt taatttcccg ccttttgccg aactcgaagc cgaagtcgcc
     4681 aaaatcgccg attatcaaac gcgtgccgga aaggaatacc gccgtgcagc ctgaaacctc
     4741 cgcccaatac cagcaccgtt tcgcccaagc catacgcggg ggcgaagccg cagacggtct
     4801 gccgcaagac cgactgaacg tctatatccg cctgatacgc aacaatatcc acagctttat
     4861 cgaccgctgc tataccgaaa cgcggcaata ctttgacagc gaagaatgga gccgtctgaa
     4921 agaaggtttc gtccgcgacg cgcacgccca aacgccctat tttcaagaaa tccccggcga
     4981 gttcctacaa tattgccaaa gcctgccgct tttagacggc attttggcac tgatggattt
     5041 tgaatatacc caattgctgg cagaagttgc tcaaattccg gatattcccg acattcatta
     5101 ttcaaatgac agcaaataca caccttcccc tgcggccttt atccggcaat atcgatatga
     5161 tgttaccgat gatttgcatg aagcggaaac agccttgtta atatggcgaa acgccgaaga
     5221 tgatgtgatg taccaaacat tggacggctt cgatatgatg ctgctagaaa taatgggttc
     5281 ctccgcgctt tcgtttgaca ccctcgccca aacccttgtc gaatttatgc ctgaggacga
     5341 taattggaaa aatattttgc ttgggaaatg gtcaggctgg actgaacaaa ggattatcat
     5401 cccctccttg tccgccatat ccgaaaatat ggaaggcaat tccccgggcc aaaaccatct
     5461 atccgcataa aattaccttg ttcccgatac tatgccgcta cccgacctga ccgatgccga
     5521 attaatagag tcgcgtaaac tgcttctgca ttttgcgcgg cttcagttgc ccgaccaccc
     5581 tgatttggct gaagatttag tgcaggaaac attgctgtcc gcatacagcg caggcgacag
     5641 ttttcaaggc agggcacttg tcaacagctg gctttttgcc atattgaaaa acaaaattat
     5701 tgacgcatta cgtcaaatcg gaaggcagag gaaagtcttt accacactgg atgacgagct
     5761 actggatgaa gcatttgaaa gccatttttc ccaaaacggg cattggacgc cggaagggca
     5821 gccgcaacat tggaacactc cggaaaaatc attaaacaac aacgaattcc aaaaaattct
     5881 gcaaagctgc ctatacaact tgcctgaaaa caccgcacgg gtatttaccc tgaaggaaat
     5941 actcggtttt tcatccgacg aaatacaaca aatgtgcggt atcagcacgt ccaactacca
     6001 caccattatg caccgcgccc gagaatcatt gcgccaatgc ctgcaaatca aatggttcaa
     6061 ccaagaaaac ccgaagtaaa cgttatgaaa aaatgccgcg atatcgccct gcttctttcc
     6121 aaacatcagg accgggaaac caccccgggc gagaagattt ccatatacac acacctgctg
     6181 ttctgcccac attgccgaga atataaaaga cagcttcaaa ccatcaaaat atcactggca
     6241 aaaacaacca gaacttcaaa ataaatgccg tctgaaaagg cttcagacgg cataagctga
     6301 cggaaaaaaa tcaaaccgat ttactgttat cggcagttca tccataatac acgcttcaaa
     6361 agcagcatat tcctccatac ggaatatata aatacgcaaa acacgaaggc tgcatcaatt
     6421 tgctttattt gccttatttc acagacggcg ctacccctcc cgcccaaccc gttctttctg
     6481 aatgagcaga tttcaatgat taaggaaacc ctaatgcgcc caatcttcct atctttcgtt
     6541 ttactcccta ttttgataac cgcctgcagc acaccggaca agtctgcccg atgggaaaat
     6601 atcggcacaa tctcaaacgg caatattcat acatatatca ataaagacag cgtgagaaaa
     6661 aacggaaatc tgatgatttt ccaagataaa aaagttgtta ccaatctaaa acaagaacgt
     6721 tttgccaaca cccccgcata caagactgcc attgccgagt gggaaatcca ctgcaacaac
     6781 aaaacatacc gcttaagttc gctacagttg tttgatacaa aaaacacgga aatttccaca
     6841 caaaactaca cagcctcttc cctccgcccg atgagcatcc tgtccgggac attaaccgaa
     6901 aaacaatatg aaaccgtatg cggaaaaaaa ctctgattgc aacttataca caaacctacc
     6961 cacaaacctt gtcataaaaa tgccgtctga aatactgaaa tatcagcatt tcagacggca
     7021 ttttgccatt ccctgaaaat tatccacaaa gttatccaca ttatttttaa aaccggcttc
     7081 catccg
//
LOCUS       DAWKJW010000100         7067 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.100, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000100 DAWKJW010000000
VERSION     DAWKJW010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7067)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7067)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7067
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.100"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            58..897
                     /locus_tag="WJJ54_001381"
     CDS             58..897
                     /locus_tag="WJJ54_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342241.1"
                     /translation="MGNFAKVSNCEFWDKINYNRAAQAAEQRAKQAQETPKEPPKQEE
                     HFIAKLPNDKLMTIYRLFQKQLDDMRGLERDIERGDWYINARYRMNENRNKIRALEDD
                     NKRLHHDYWAVQDQGENRFFGMGKIGAKLVKENEKQQHINERHGANVREIRRLKTENE
                     KLEGQYSDKLAADVVKVRDRFNEELDNVRREIGKRPMEEFRNVFLQAAQEAQTTIGQK
                     AVQIELEKFPLNGSPSAKRIAFYFGAQRIREVEQKEREDQRKEQERQARRMERDDGHG
                     IGM"
     gene            complement(1167..2429)
                     /locus_tag="WJJ54_001382"
     CDS             complement(1167..2429)
                     /locus_tag="WJJ54_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEZ7342242.1"
                     /translation="MTLFRPEVFQAKKNRWTGQIVLVRPFSLQFLTFFAVSLAAILVA
                     FLIFGSYTNKTTVTGQLLPTTGVVRVYSQDMGVIAHQHVMNGDFVKKGDVLFTLSTSR
                     NDNNGSIQARLLAEAELKKSLSEQEIIMKKRVHAAEKTAQENTVHRFQNQMQHVRNQI
                     IMQEKRIAISEKMLEKQRYLAKMDAISELEKNSYEIALLELKAGLAAYQREADNLARE
                     ITVQQSNLKNLPEQQATEISQLERAVSVYQQEILDYQQRNEQTIRATISGYVSSINTE
                     IGQQVDTNKLLMSIVPKESELLANLYVPSRAIGFVKPNDKVILRYQAYPYQKFGHAEG
                     HVISIAQTALGAQEWTNLGNIFTQTAQVNEPVYLIKVKLDNQHIRIYGTEKKLQIGMI
                     LEADILHENKRLYEWILDPLYQVMGKIS"
     gene            complement(2431..4527)
                     /locus_tag="WJJ54_001383"
     CDS             complement(2431..4527)
                     /locus_tag="WJJ54_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HEZ7342243.1"
                     /translation="MPTYLSRLSFSFSRRLPVILQTEAAECGLACLVSVLGFHGFYTD
                     LRHLRARFSLSLKGATLADLVRFANSMNLTARAVRLDLDELANLRVPCILHWDLNHFV
                     VLHEVHRNHIMIMNPASGWQKVRMEEVSRCFTGVALELFPNTQFEEKHETRKIRVLPM
                     LRGVVGLKRSLFQLLLLATVLQVFALASPFFMQWVIDHAIVSADRDLLLTLALGFGLL
                     MIVQQLVSLLQTWAGMYLSTSLNIQWKANVFSHLMDLPISYFAKRHLGDVVSRFGSVD
                     SIQSTLTSTFFVLVINSILAVFTLGLMYLYSPSLMAVVLVVLLIYIGIRWVAYYPLRH
                     ATEENIVHAAKQSSYFMETIRGIQTVKLFDKNTQRHAAWLNLFIDTINTGLTTQKLSA
                     LFGFANSLLFGIANILIVYFGAVSVLNGGFTVGALMAFMSYKSQFESKAGSLIDQFVQ
                     IKMLGLHAERLADIVLEETENEQNNDFSLPKNLEHFDIQIENVSFSYAENEPYILQNF
                     SLIIKQGTAIAFAGHSGCGKSTLIQILTGSLKPESGHVLLGGHDIHALPPAFIRTWSA
                     SVMQNDVLFTGSIAENISFFDDTPNMEKIAFCAQMANIHHEIVAMPMAYETLIGDMGS
                     ALSGGQKQRIVLARALYREPKILFLDEASSHLDINNERVINDNLRQLNITKIMVAHRQ
                     ETLNTADSVVYLDKVA"
     gene            complement(4744..5079)
                     /locus_tag="WJJ54_001384"
     CDS             complement(4744..5079)
                     /locus_tag="WJJ54_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342244.1"
                     /translation="MYELSIVDLELVSGAGPIADFTTGEGGAIGGGTGYIAGKAGGGA
                     IGGILGSPFGPGGTIVGVAAGQQYGGKVGSVIGAGAGSAIGGVIGRGIESILDNDRSG
                     NDYGDGTGY"
     gene            complement(5672..6007)
                     /locus_tag="WJJ54_001385"
     CDS             complement(5672..6007)
                     /locus_tag="WJJ54_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HEZ7342245.1"
                     /translation="MKELNISDLKIVSGGAEPAYINPLDAIGIGSAAVGGGRAVSATA
                     TGDMIARSAARGGLIGLAGIAGWNTGTYLYHETPLGDWLSSGVDKLTGLDQNFNDASG
                     NDYGDGTGY"
     gene            complement(6249..>7067)
                     /locus_tag="WJJ54_001386"
     CDS             complement(6249..>7067)
                     /locus_tag="WJJ54_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin-like domain-containing protein"
                     /protein_id="HEZ7342246.1"
                     /translation="QIAQFAQAQTVVSGYLAFGSSSSYRNHWDTRDVFAVQLIGTKHW
                     TLSAANFDMPLYMQQAKDIPHITPPTTVDMEVILEAGDILYIPRGWWHNPMPMNCETF
                     HLAIGTFPPNGYNYMEWLMKKIPDIQSIRQNFIGWQHDQKNLDDAAQAITEMMNNPKN
                     YQTFMQDFLGSQRTNTAFNMDLFGNAHNQTLPEHCFLRLNSNDYSTISQGYLIANGIK
                     LNIDEISMEFLMILVDKYMISLAEILLFFSVDEEENIKKLVWRLGELDIIEIIR"
BASE COUNT         2317 a         1463 c         1227 g         2060 t
ORIGIN      
        1 tggaagaagg tactcatgag aaatccccta aatgtcttag taggaattta ggggattttg
       61 gggaattttg caaaggtctc aaattgtgaa ttctgggata aaattaatta taatcgggct
      121 gcccaagccg ccgagcagcg ggcaaagcag gcgcaggaaa caccgaaaga gccgccgaaa
      181 caggaagagc actttatcgc caagctgccg aacgacaagc taatgacgat atacaggctg
      241 tttcaaaaac aactggacga catgcgcggc ttggagcgcg atatagaacg cggagattgg
      301 tacatcaatg cgcgataccg catgaacgaa aaccgaaaca aaataagggc gctggaagac
      361 gacaacaaac ggctgcatca cgactattgg gcagtccaag accaaggcga aaaccgcttt
      421 ttcggcatgg gtaaaatcgg cgcaaaactg gttaaggaaa acgagaagca gcaacacatc
      481 aacgaacggc atggagcgaa cgtgcgagaa atccggcggc tgaaaacaga aaacgaaaaa
      541 ctggaagggc agtatagcga caagttggcc gccgacgtgg tcaaagtacg cgacaggttt
      601 aacgaagaac tggacaatgt ccgcagggaa atcggcaaac ggccgatgga agaattcagg
      661 aacgtatttt tgcaggcagc ccaagaagca cagacgacaa tagggcagaa ggcggttcaa
      721 atcgaactgg aaaaattccc cctgaacggc agcccttcgg ccaagcgaat cgcgttttat
      781 ttcggcgcgc agcggataag ggaagtagag cagaaggagc gggaagacca gcgcaaagag
      841 caggagcggc aggcgcggcg tatggagcgg gacgacggcc acggcatcgg catgtagaaa
      901 aaccagccta tcatactggt tggaagacgt attatggtac aaagtcagca aatgcatcga
      961 aaatatttac ttctcgcata caacgcagat acaattgcag caattcagga agcaaaaatg
     1021 gagcgaaaaa ttgtatcact tctctgtctt cattattaca taaaacactg tgtatttgtg
     1081 cttaacaaca aattggaagt catcggacat tggttttgct tgataattag gggcactcat
     1141 acgctccaat gtattgagca attcagctat gatatttttc ccattacttg atacaaaggg
     1201 tcaagtatcc attcatataa ccgtttattc tcatgcaaaa tatcggcttc tagtatcata
     1261 ccaatttgca atttcttctc cgtgccatat atacgaatat gctgattatc cagttttact
     1321 ttgattaaat aaacaggctc attcacttgt gctgtttgag taaaaatatt gcctaaattt
     1381 gtccattctt gcgcccctag tgccgtttga gcaatagaaa tgacgtgtcc ttctgcgtgt
     1441 ccgaattttt gataaggata tgcttgataa cgcaaaatta ccttgtcatt tggttttaca
     1501 aaaccgattg cgcgactagg gacatataaa ttagccagta attcactttc tttcggcacg
     1561 atactcatca atagtttgtt agtatctacc tgctgaccaa tttccgtgtt aatagaactg
     1621 acatagcctg atatggttgc gcgaatagtt tgttcgttac gttgttgata atccaatatt
     1681 tcttgttgat agacagatac tgcgcgttct aattgactga tttcagtagc ttgctgttca
     1741 ggcagatttt ttagattgct ttgctgtaca gttatttccc gagcaagatt atctgcttct
     1801 cgttggtaag cggctaaacc tgctttcagc tccaataaag caatttcata actatttttt
     1861 tctaattcag aaattgcgtc cattttggct aaataacgct gtttttctaa cattttttca
     1921 gaaatcgcaa tacgtttttc ttgcatgata atttgatttc taacgtgttg catttggttc
     1981 tgaaaacggt gtaccgtgtt ttcttgtgcg gttttttctg ctgcatgaac acgttttttc
     2041 ataataattt cttgttctga tagtgatttt tttaattcag cttcggcgag taatcgtgct
     2101 tgtatgctgc cattattgtc atttcgtgaa gtagataatg taaataacac atcgcctttt
     2161 ttcacaaaat cgccattcat aacgtgttga tgagcaataa cccccatatc ctgcgaatat
     2221 acgcgtacta cccctgttgt cggcaaaagt tgtcctgtta cggtggtttt attggtatag
     2281 ctcccaaaaa ttaaaaaagc aactaaaata gccgctaatg agaccgcgaa aaatgttaaa
     2341 aactgcaagg aaaaaggacg cactaaaaca atttgccctg tccagcgatt ttttttagct
     2401 tggaatactt cggggcgaaa taatgtcatt tcaggctacc ttgtctaaat aaactacgct
     2461 atcagcagta tttaaagttt cctgacgatg cgcgaccatg attttggtaa tgttgagttg
     2521 gcgtagatta tcgttaatca cacgttcatt gttgatgtcc aaatggctac tggcttcatc
     2581 taaaaacaaa atttttggtt cacgatataa agcacgagct agtacgatgc gctgcttttg
     2641 cccaccactc aatgcactcc ccatgtcgcc aatcaatgtt tcatacgcca taggcatagc
     2701 gacaatttca tgatgaatat tcgccatttg agcgcaaaat gcgatttttt ccatattggg
     2761 cgtatcatca aaaaaactga tgttttctgc gattgagcca gtaaataaca catcattttg
     2821 catcacactt gcgctccatg tgcggataaa tgcaggtggt aacgcatgaa tgtcatgccc
     2881 acctaataac acatgaccgc tttcaggttt cagactgcct gtcagaattt gaatgagcgt
     2941 agatttccca cagcctgaat gtccagcaaa cgcaatggct gttccttgtt tgatgattaa
     3001 actgaaattt tgcaaaatgt atggttcatt ttcagcatag ctaaatgata cattttctat
     3061 ttgaatatca aaatgttcta aatttttagg cagactgaaa tcgttgtttt gttcattttc
     3121 cgtttcttct agcacaatat ccgccaagcg ttccgcgtgt aatcctagca ttttgatttg
     3181 tacaaactgg tcaatcaatg aacctgcttt actctcaaac tgacttttgt aggacataaa
     3241 cgccattaac gccccaacgg taaaaccacc gttcaataca gaaaccgcac caaaatacac
     3301 aattaaaata ttagcgatac caaataaaag gctgttcgca aaaccgaaca gcgcggaaag
     3361 tttttgtgtc gttaaacctg tgttaatcgt gtcaataaat aaattcagcc aagccgcatg
     3421 acgttgtgta tttttatcaa ataatttaac cgtttgaata cctcgtatgg tttccatgaa
     3481 ataactgctc tgcttggcag catgaacaat attttcttcg gttgcatggc gtaatggata
     3541 atatgccacc caacgaatac caatataaat cagcaaaaca accagcacaa ctgccattaa
     3601 actcgggctg tacaaataca ttaatcctaa tgtaaatacg gccagaatgc tgttgatcac
     3661 cagcacaaag aaagtagaag tgagcgtact ttgaatactg tccaccgagc caaaacgcga
     3721 aaccacatca cctaaatgtc gtttagcgaa ataagaaata ggcaaatcca ttaagtggct
     3781 gaatacgtta gctttccatt ggatattcaa agaggtagat aagtacatac ccgcccaagt
     3841 ttgcaacaat gacactaact gctgcacaat catcaacaag ccaaaaccca atgccaatgt
     3901 cagcaataaa tcacggtctg ccgatacaat ggcatggtct attacccatt gcataaaaaa
     3961 agggcttgcc aaagcaaaca cctgtaatac agtagccaac agtaaaagct gaaataaaga
     4021 tctttttaat cccaccactc cgcgcaacat tggtaatacg cgaattttac gcgtttcgtg
     4081 tttctcttca aattgcgtgt taggaaatag ttccaacgct acacctgtaa aacagcgcga
     4141 gacttcttcc atacgcactt tttgccaacc cgaagcaggg ttcataatca taatgtgatt
     4201 gcgatgaact tcatgcaaca ccacaaaatg atttaaatcc caatgcaaaa tacagggtac
     4261 gcgcaaattt gctaactcat ctaaatccaa ccgaacagcc cgagcggtta aattcatgct
     4321 attagcaaac cgtaccaaat ccgccaatgt tgcgccttta agcgacaaag aaaaacgcgc
     4381 ccttaaatgg cgcaaatccg tataaaaacc atgaaacccc aacaccgata ccaaacacgc
     4441 taatccacat tcggctgctt ccgtttgcaa aataacgggc aaacggcgcg agaaactgaa
     4501 tgataggcga gagagatatg ttggcattag agttcctatt ttatttttta tttaaaaaaa
     4561 ttattattac cgataataat actgataata aaaaaaataa aactattttc atttgattac
     4621 gacttaatgg aggctaatgt attaatccgt aatgtacaga taagccaacc aaaaaaatca
     4681 aaacaagaaa gaaagccatg agtacttggt aaggattcat caatgctatc cctataattt
     4741 tgtttaatac cctgttccat caccgtaatc attacctgat cgatcattat ccaaaatgct
     4801 ttcaatacct cgtccgatca caccaccaat ggcagatcca gctcctgccc caattacaga
     4861 accaacctta ccaccatatt gttgtccagc tgcaacacca actatagtac cacctggacc
     4921 aaatggagag cctagaattc ccccgatggc tccaccacct gctttccctg caatatatcc
     4981 agtaccacca ccaatagcac ctccctctcc tgtagtgaaa tcagcaatgg gaccagcacc
     5041 actaactaat tcaagatcca caatagagag ttcatacatt tttatttacc tcaaaataaa
     5101 atttaataat aaaaaagaaa tgagttagac agaatagtat cactataaaa atgatagaat
     5161 aaatattcat attaaaataa aaattttcct gtctaaatag agttattaag gcaatataca
     5221 aaataaccat aaaataaaaa gtgaatattt ttacaaattc tattttattt tgatttttat
     5281 ttattcctcg tgcaaaaatt accattttat aaatcaaaag caatgttgaa attataaacg
     5341 aaaatgctat taatatagaa atatgatttg caaaaggtat agttgataaa ttaaatctaa
     5401 ctttactgta tacaatgtat acgttcaata aaataaatga tattgaggat atattgatta
     5461 aaatttttgt gttatttaat aaaacaccca ttgattacct cacgatttca ataacatcta
     5521 ataaacataa ctccctaact aatttcttaa tattttcttg ttcatcaaca ctaaacaacg
     5581 ataatatttc agctagggat atcatgtaaa gcaagaaaga aagccatgag tacttggtaa
     5641 gcattcatca atgctattcc tataattttg tttaataccc tgttccatcg ccataatcat
     5701 taccagatgc atcattaaaa ttttggtcta gtcctgttaa tttatcaact cctgaactta
     5761 accaatcgcc taatggcgtt tcatgatata aataagtacc tgtattccag cctgctatgc
     5821 ctgccaaacc aattaatcca cctcgagcag cacttcttgc tatcatatcc ccagttgcag
     5881 tagctgaaac agctctccct ccacctaccg ctgcactacc tataccaata gcatcaagag
     5941 gattaatgta agctggttca gcaccacctg aaactatttt caggtcagaa atatttaatt
     6001 ctttcattgc ttttcctttt taacaatctt atttttcaat atgattgaat agtacgctca
     6061 tgccaatacc aatcataata ctaaatacta tattaatgta atctccgtca taattaggat
     6121 gaagacgcca ccctcctaat tctgataatt tcataaaaat atatattaca atagaatatc
     6181 caattgcatg taaaaatgtt ttcatatatt ttatatccta aaatattaaa tcaaatatta
     6241 aatccatctc atcttataat ttcaattata tctaactctc ctagccgcca aactaatttc
     6301 ttaatatttt cttcttcatc aacactaaaa aacaataata tttcagctag ggatatcatg
     6361 tatttatcaa ccaaaatcat taaaaattcc atactgattt catctatatt taatttaatg
     6421 ccattcgcaa tcaggtatcc ttgtgaaata gttgagtaat cattactatt taatcttaaa
     6481 aagcaatgct caggtaatgt ttgattatga gcatttccaa acaaatccat attgaatgct
     6541 gtattggtac gctgacttcc caaaaaatct tgcataaatg tttgataatt ttttgggtta
     6601 ttcatcattt cggtaattgc ttgagctgca tcatctaggt ttttttggtc gtgttgccag
     6661 cctatgaaat tttgacgaat actctgaata tcaggtattt ttttcatcaa ccattccata
     6721 taattataac catttggagg aaaagtacca atagctaaat ggaatgtttc acaattcata
     6781 ggcataggat tatgccacca accacgcggg atatataaaa tatctcctgc ctctaaaatg
     6841 acttccatat ctactgttgt aggcggagta atgtgcggta tatcttttgc ttgttgcata
     6901 tacaatggca tatcaaaatt tgcagcagaa agtgtccagt gttttgtgcc aatcaattga
     6961 accgcaaaca catcacgagt atcccaatga ttccgatatg atgaagaact accaaaagct
     7021 aaataaccac taacaactgt ttgtgcttga gcaaattgag caatttg
//
LOCUS       DAWKJW010000101         7007 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.101, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000101 DAWKJW010000000
VERSION     DAWKJW010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7007)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7007)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7007
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.101"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(75..1496)
                     /locus_tag="WJJ54_001387"
     CDS             complement(75..1496)
                     /locus_tag="WJJ54_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEZ7342247.1"
                     /translation="MRHLPLFSLMLFPASVYAADLDGANLNLLWGLPFALILLSIALG
                     PLFFSHTWHHHYGKITAFWTLLFLIPFSLVFGASAGIHTVAHALVEEYIPFILLLLAL
                     YTISGGILVWGDLNGTPKLNTALLAVGTALASIMGTTGAAMLMIRPLLKANQNRTRRV
                     HIVIFFIFLVANIGGGLTPLGDPPLFLGFLKGVDFMWTVKHMFAPVLISTAVLLTAFY
                     FIDNRFFKQESIAQDTPAQQEKPEKIAIFGKWNFLLLSGVVGAVLMSGLWKPEHPGFE
                     ILGSRYALQNLVRDVILIALTAVSMAITPKQVRAGNEFNFEPIAEVGKLFLGIFITIF
                     PVLSILKAGEAGALGGVVSLVHDTAGHPINVMYFWMSGILSAFLDNAPTYLVFFNMAG
                     GDAQALMTGTLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMPTFFGYMM
                     WSVAFLTPVFIVHTLIFFVFKLL"
     gene            complement(1859..2218)
                     /locus_tag="WJJ54_001388"
     CDS             complement(1859..2218)
                     /locus_tag="WJJ54_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HEZ7342248.1"
                     /translation="MIRYLLIACGCISLLLGIIGIFLPLLPTTPFVLLSAACWAKASP
                     RFYRWLHRHRYFGPMVHNWEQNGAVPRKAKIFAISMMTASCLIMFWQFPQRWWVGAVS
                     SVFCSLVAIWMWRRPES"
     gene            complement(2215..2820)
                     /locus_tag="WJJ54_001389"
     CDS             complement(2215..2820)
                     /locus_tag="WJJ54_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 domain-containing protein"
                     /protein_id="HEZ7342249.1"
                     /translation="MTIMNINTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNL
                     VRIAISEAKHLDGFLEDLDEELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIAD
                     AAVVENGLEGIVQIAPFHPDFQFEGTDSDDIGNYTNRSPYPTLHLIREDSIAKAAQAF
                     PDASAIFERNIALLEKMGHEGWVKLGITSCPYPHNKKNISK"
     gene            complement(2867..3349)
                     /locus_tag="WJJ54_001390"
     CDS             complement(2867..3349)
                     /locus_tag="WJJ54_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEZ7342250.1"
                     /translation="MPQLTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLK
                     QLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFAL
                     TGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKQTTSLPLNHLLKE
                     "
     regulatory      3553..3650
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            3861..4961
                     /gene="gcvT"
                     /locus_tag="WJJ54_001391"
     CDS             3861..4961
                     /gene="gcvT"
                     /locus_tag="WJJ54_001391"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEZ7342251.1"
                     /translation="MITLKTTPFHQAHQDAGAKLVDFAGWELPIHYGSQIAEHEAVRT
                     DAGMFDVSHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLI
                     VYRTNEAETQYRIVSNGATREKDTAQFHKVGQEFGVAFNPRYDLGMLAVQGPKAIEKL
                     LTVKPEWADVIHGLKPFQGADLGNDWFVARTGYTGEDGVEVILPGTEAVAFFKALQAA
                     GVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESRDFVGKAALLA
                     LKEKGVAVKQVGLLLGKGGILRAHMEVLTDKGKGETTSGVFSPSLKQSIAIARVPKDF
                     DGDTAKVLMRGKEVDVRVLKLPFVRNGQKQFD"
     gene            5123..5509
                     /gene="gcvH"
                     /locus_tag="WJJ54_001392"
     CDS             5123..5509
                     /gene="gcvH"
                     /locus_tag="WJJ54_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEZ7342252.1"
                     /translation="MSNNIPAELKYVASHEWLRLEEDGTITVGITHHAQELLGDIVFV
                     ELPEVGANLAAEEQAGVVESVKAASDVYAPIAGEVVAVNEDLPSAPETANSDSYGAGW
                     FFKIKPVNPADYDGLLTAEQYAGEVD"
     gene            5656..6903
                     /locus_tag="WJJ54_001393"
     CDS             5656..6903
                     /locus_tag="WJJ54_001393"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HEZ7342253.1"
                     /translation="MQLTAVGLNHQTAPLSIREKLAFAAAALPKAVRNLARSNAATEA
                     VILSTCNRTELYCVGDSEEIIRWLADYHSLPIEEIRPYLYALDMQETVRHAFRVACGL
                     DSMVLGEPQILGQIKDAVRVAQEQESMGKKLNALFQKTFSVAKEVRTDTAVGENSVSM
                     ASASVKLAEQIFPDIGDLNVLFIGAGEMIELVATYFAAKSPRLMTVANRTLARAQELC
                     DKLGVNAEPCLLSDLPAILHDYDVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDL
                     AVPRDIEAEVGDLNDAYLYTVDDMVNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQ
                     GRQSVPLIKALRDEGEKARKQVLENAMKQLAKGATAEEVLERLSVQLTNKLLHSPTQT
                     LNKAGEEDKDLVHAVAQIYHLDK"
BASE COUNT         1792 a         1678 c         1954 g         1583 t
ORIGIN      
        1 tgtcggaagg ggggatattg atttgattat gccggaattt aaaatgccgt ctgaatgttc
       61 agacggcata gcgtttacag cagtttgaaa acgaaaaaga taagggtatg tacgatgaag
      121 acgggtgtca ggaaggcgac cgaccacatc atatagccga agaaagtcgg catcggtacg
      181 ccgcgctgtt cggcaatggc cttgaccatg aagttcggtg cgttgccgat gtaggtcagt
      241 gcgcccatga ataccgaacc catagaaacc gccagcagcg aatgaaacag ggtacccgtc
      301 atcaaggctt gggcatcgcc gcccgccata ttgaaaaaaa cgagataagt gggcgcgtta
      361 tccaagaatg ccgacaatat gccgctcatc caaaaataca tcacattaat cggatgacct
      421 gccgtatcgt gaaccagcga taccaccccg cccagcgcgc ctgcctcgcc tgctttcaga
      481 atgctcagga cgggaaagat ggtgatgaag atgccgagga agagtttgcc cacttcggcg
      541 atgggttcaa agttgaattc gttgcctgcg cggacttgtt tgggcgtgat tgccatagat
      601 acggcggtca atgcaatcag gatgacatcg cggacgaggt tttgcagggc gtaacggctg
      661 ccgaggattt caaatcccgg gtgttcgggt ttccaaaggc cggacattag aaccgcgccg
      721 accacgcccg aaagcaggag gaagttccat ttgccgaaga tggcgatttt ttcgggtttt
      781 tcctgttgtg ccggcgtatc ttgtgcaatg ctttcctgtt tgaagaaacg gttgtcgatg
      841 aaatagaagg cggtcaacag gacagcggtg ctgatcagga cgggggcgaa catatgtttg
      901 accgtccaca tgaaatctac gcctttgagg aagccgagga agagtggggg gtcgcccaaa
      961 ggggtcagac cgccgccgat gtttgcaacc aggaaaatga agaagatgac gatgtgcacg
     1021 cggcgggtac ggttttggtt ggctttcagc agcggacgaa tcatcagcat tgctgcgccg
     1081 gtcgttccca tgatagaggc aagtgccgta ccgacggcaa gcagggcggt gttgagcttg
     1141 ggtgtgccgt tcaagtcgcc ccaaaccaaa atgccgcctg aaatggtgta cagggcaagc
     1201 agcagcagga tgaaagggat gtattcttca acgagtgcgt gtgcgacggt atggataccg
     1261 gcggacgcgc caaaaaccaa actgaacggg atgaggaaga gcaatgtcca aaaggcggta
     1321 attttgccgt aatggtgatg ccaggtatgc gaaaaaaaca agggacccaa tgcgatagac
     1381 agcaaaatca gggcaaaggg caggccccac agcaggttta ggtttgcgcc gtccaaatct
     1441 gcggcgtaaa ccgatgctgg gaaaagcatt agtgaaaaca ggggtaggtg gcgcatcgtg
     1501 tttcctcgat tcaagcactg ccttgcgcgg cgcgtgggag tgatacaggc accgtgccgc
     1561 ccggacatag gcggactgtg ctgcctgttt gtttttgaaa aaagttttcc gattgattgt
     1621 aaagtaaata atcaggataa accagtttcc caaaccggaa ggcggcggga aggcggattg
     1681 ctgtgcttgg gaatatatgt tctttttgat aaataatttt atttaaaaca aataaatata
     1741 tgtctttaat aaataatcta tcgaaaacga aaaatgaatt tattttaaca tatatttgca
     1801 atgaaacagg tttgcccccc cccccgtttg tttgccctta tccctttcag tacggcattc
     1861 aagattcggg cctgcgccac atccatatgg cgacaaggga acaaaaaacc gatgaaaccg
     1921 ccccgaccca ccagcgttgg ggaaactgcc aaaacattat caggcaggat gcggtcatca
     1981 tactgatggc gaatattttg gctttgcgcg gcactgcgcc gttttgttcc cagttatgaa
     2041 ccatcgggcc gaaatagcgg tgccggtgca gccagcggta aaagcgcggg gatgcctttg
     2101 cccagcaggc ggcggagagc agtacgaacg gcgtggtcgg caacagcggc aaaaaaatgc
     2161 cgatgatacc caacagcagg gaaatgcagc cgcaggcaat taaaagataa cgtatcattt
     2221 tgaaatattt ttcttattgt gcggataagg gcaggatgtg ataccgagtt ttacccagcc
     2281 ctcatgtccc attttttcca gcagggcgat attgcgttcg aatattgccg aagcgtcggg
     2341 aaaggcttgt gcggctttgg caatgctgtc ttctcggatg aggtgcagcg tcggataggg
     2401 agaacggttg gtgtagttgc cgatgtcgtc tgaatccgtg ccttcaaatt ggaaatcggg
     2461 atgaaacggg gcgatttgga cgatgccttc caagccgttt tcgacaacgg cggcatcggc
     2521 aatatcgagc atatcgttga atacgtcgaa atcgggaaat agggtcgggt gaaccagcag
     2581 ggtggtttcc agttcggtgg cgggtgtatt gcccagtcgc tgcagttctt cgtccaagtc
     2641 ttccaaaaaa ccgtcaaggt gtttggcttc gctgatcgcg atgcggacaa ggtttttaac
     2701 gtggggggct ttggcaaagg gacacaggtt cagaccgatg acggcttttt ccaaccattg
     2761 tccggtgtgt tcggcaacag catctttatt ttcggaagta ttgatattca ttattgtcat
     2821 gtaaatgtgt ttgcagattg cacgtgcggg aaaatcggga agggcactat tccttcagca
     2881 ggtggttgag cggcagggag gtggtttgtt tgatttcttt taaaacaaag ctcgattgtg
     2941 catcttgtac gccgtggtgg gacaggagcg tatccaaaac aaaatgggaa aacgcgttca
     3001 tatcggtaaa aaacgcctga agcaggtagt cggtttcccc tgtcagggcg aagcagctca
     3061 agacttcagg ccattttcga accgatgcgg caaagtcttc ccgcgcgtct tttgctttgc
     3121 ggatggaaac gcggataaat gcctgaagcc ccaggttgac ggattccgga gacagcagcg
     3181 cggcatattg gcggacgatg ccggcatctt ccaactgctt cagacggcgc aggcacggag
     3241 aaggcgaaag tgcgacacgt tcggacagtt cgacattggt cagcctgccg ttttcctgga
     3301 gaacctgtaa gattttaata tcggttttgt ctaaagtgag ttggggcata tttgcgttcc
     3361 gttttaagga attcggattg tctgtccgta tgtttgcggc aatccgcaca gatggagacc
     3421 atattaacat ataaaaagtt ataccgtcat ccgggacaaa ttttgttttc ggaaaatcat
     3481 gtgaaaacag aggcggtcgg tttgcatctc ttttaagacg gcttgcccaa accgccgatt
     3541 caagacataa tcgggaaatg tgcaggagag tgttacaccc aactacaatg taaccaccga
     3601 aggcgcagac acccttaaat cgctcaggta tcagggactg cacattgaaa caaacaatct
     3661 ggagagcggc gttggaataa cgtccaccga aggggagaag gccgtctgaa ccaccattca
     3721 gacaaccgcg caaagcagtg agcagactgg tttaccatca tgcggatacg gccgaaaatc
     3781 tcaggttcaa ggacagatag ggtcatccgc gcacaggtgc gcgggtggca tctgaacaaa
     3841 aaatccggag aaacttgaga atgattactc tgaaaaccac cccatttcat caagcccatc
     3901 aagatgcagg cgcgaagctg gtcgattttg ccggttggga gctgcccatc cattatggtt
     3961 cacaaatcgc cgaacacgaa gccgtgcgca ccgatgcagg tatgttcgac gtatcacaca
     4021 tgcttgttac cgacgtagca ggcgcaaatg ccaaagcctt tttccgcaaa ctgattgcca
     4081 acgacgttgc caaactcgcc ttcgtcggca aagcccttta ttccgcgctg ctcaacgaca
     4141 acggtggcgt gattgacgac ttgatcgttt accgcaccaa tgaagctgaa acccaatacc
     4201 gcatcgtgtc caacggcgcg acccgcgaaa aagacaccgc ccagttccat aaagtcggac
     4261 aagagttcgg cgttgccttt aatccgcgct acgacctcgg catgcttgcc gtgcaaggcc
     4321 ctaaagccat tgaaaaactc ctgaccgtca aacccgaatg ggcggatgtg attcacggcc
     4381 tcaaaccgtt ccaaggtgca gacttgggca acgattggtt tgtcgcccgc accggctata
     4441 ccggcgaaga cggcgtcgaa gtgattctgc cgggcactga agccgtcgca ttcttcaaag
     4501 ccctgcaagc agcaggcgta caaccttgcg gtctcggcgc gcgcgacacc ctgcgcatgg
     4561 aagccggcat gaacctctac ggcaacgata tggacgacga taccagcccg ctcgaagcag
     4621 gcatgggttg gaccgttgat ttgaaagacg aaagccgcga ttttgtcggc aaagctgcct
     4681 tgttggcatt gaaagaaaaa ggcgttgccg tcaaacaggt cggtttgctg ctcggcaaag
     4741 gcggcatcct gcgcgcgcat atggaagtgt tgaccgacaa aggcaaaggc gaaaccacca
     4801 gcggcgtatt ctcgcccagc ctgaaacaat ccatcgccat cgcccgcgta ccgaaagact
     4861 ttgacggcga taccgctaaa gtgctgatgc gtggcaagga agtggacgtg cgcgtattga
     4921 agttgccgtt cgtgcgtaac ggtcaaaaac agtttgatta atatcggttc agacggcatt
     4981 ttcatttcat atgccgtctg aaagcaggtt ttaattgttg tccgatacgg acgtttgtag
     5041 aaagcattga acaaggcatc tgtggatatt gattcatgca gatgccgtct gaaaataacc
     5101 cctatcaatg gagtatcaaa ccatgagcaa caacatcccg gccgaactga aatacgttgc
     5161 cagccatgaa tggctgcgcc ttgaagaaga cggtacgatt accgtcggca ttacccacca
     5221 cgcgcaagag ctgttgggcg acatcgtgtt cgtcgagctg cccgaagtcg gcgcgaacct
     5281 tgccgctgaa gagcaagccg gtgtggttga gtctgtaaaa gccgcgtccg acgtgtacgc
     5341 accgattgca ggcgaagtcg ttgccgtcaa cgaagatttg ccaagtgctc cggaaactgc
     5401 caacagcgat tcttacggcg caggctggtt cttcaaaatc aaacctgtca atcctgccga
     5461 ttacgacggt ctgctgactg ccgaacaata cgcgggcgaa gtggactaaa tctctatcct
     5521 gataatggga tgactgattt gagaaactgc actttcagac ggcaaggatg cgtttggaag
     5581 tgcagttttt gtctgtgtct tcaaagttca gttaggctat aataacggtc tatattcatc
     5641 tttaccgatt ttttcatgca acttaccgct gtcggactca atcatcaaac cgcaccttta
     5701 agcatacggg aaaagctggc gtttgccgcc gccgccctgc ctaaagccgt ccgcaatctt
     5761 gcccgaagca atgcggcaac ggaggcggta atcctttcta cctgcaaccg caccgagctt
     5821 tactgcgtcg gtgattcgga agaaatcatc cgatggcttg ccgattacca cagtttgccg
     5881 attgaagaaa tccgtccgta tctgtacgcg ctggatatgc aggaaaccgt gcgccatgcc
     5941 ttccgcgttg cctgcggctt ggattcgatg gtgttgggcg agccgcagat tttaggacag
     6001 attaaggatg cggtcagggt tgctcaagag caggaaagta tgggtaagaa actcaatgcc
     6061 ctgttccaaa aaaccttttc tgttgctaaa gaggtccgta ccgatactgc cgtcggcgaa
     6121 aactcggttt ccatggcttc cgcttccgtc aaattggcgg aacagatttt tcccgacatc
     6181 ggcgatttga atgtcttgtt tatcggcgca ggcgaaatga ttgagctggt tgccacttat
     6241 tttgccgcca aaagtccccg gctgatgacg gttgccaacc ggacgctggc gcgtgcacag
     6301 gagttgtgcg acaagctcgg tgtcaacgcc gaaccgtgcc tgctgtccga tctgcctgcc
     6361 attctgcacg attacgacgt agtggtttct tcaacggcaa gccagttgcc cattgtcggc
     6421 aaaggcatgg tggagcgtgc attgaaacaa aggcagagta tgccgttgtt catgcttgat
     6481 ttggcagtgc cgcgtgacat tgaagcggaa gtcggcgatt tgaacgatgc ctatctttat
     6541 acggtggacg atatggtcaa catcgtccaa agcggcaagg aggcaaggca gaaggccgcc
     6601 gccgccgccg aaacgctggt atccgagaag gttgccgaat ttgtcaggca gcagcagggc
     6661 aggcagagcg tccccttgat taaagccttg cgggacgagg gcgagaaagc gcgcaagcag
     6721 gtgttggaaa atgcgatgaa acagcttgcc aaaggcgcaa cggcagaaga ggttttggaa
     6781 cggctgtccg tccaactgac caacaagctg ctgcattcgc cgacccaaac tttgaataag
     6841 gcgggggaag aagataaaga tttggttcat gccgtcgcgc agatttatca tttggacaaa
     6901 taacggtgcg ccggaaaagg atgccgtctg aaggggtttc agacggcata tttttgtgct
     6961 gtctgacaac atcgtgaaat cccacattat atcgatgtaa tcacaaa
//
LOCUS       DAWKJW010000102         6775 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.102, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000102 DAWKJW010000000
VERSION     DAWKJW010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6775
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.102"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(141..1529)
                     /locus_tag="WJJ54_001394"
     CDS             complement(141..1529)
                     /locus_tag="WJJ54_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEZ7342254.1"
                     /translation="MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPSALEGRDIM
                     ASAQTGSGKTAAFLLPTLQKLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNM
                     RWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFERLEVLILDEAD
                     RMLDMGFIDDIETIVEATPSDRQTLLFSATWDGAVGKLARKLTKDPEIIEVERVDDQG
                     KIEEQLLYCDDMRHKNRLLDHILRDADIDQCVIFTSTKAMTEVIADELYEKGFAANCL
                     HGDMPQGWRNRTLMDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRI
                     GRTGRAGRTGIAITFAEVNEYVKVHKIEKYIGRKLPELTIEGMEPTRKRKPAGGKPKG
                     KGGWGDRKAGGQRGDHKPGKEGFGGKTRGEGFKKEGFKKDGFKKTGEGFKGKRKAGDS
                     FAGKSERRYKDR"
     gene            1857..2804
                     /locus_tag="WJJ54_001395"
     CDS             1857..2804
                     /locus_tag="WJJ54_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ7342255.1"
                     /translation="MTDITPFANRLGKNIKHLMKWAKRNGIEAWRIYDRDIPQFPFAV
                     DVYGDQIHLQEYDTGWLMQPEEYEAWLAEVLEAVAFVTGFAPEQIRLKRRERQKGLQQ
                     YEKTGKAGEDFVITENGRKFWVNLDKYLDTGLFLDHRNTRKKVGETAAGKRFLNLFSY
                     TGSFTVYAATGGAASSETVDLSNTYLDWARRNFELNGIDTERHKIVRADVFQYLQTAY
                     GEGRQFDLIVMDPPSFSNSKKMSDILDIQRDHKKLIDGAVKLLASDGILYFSNNLRSF
                     VLDDLVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS"
     gene            complement(2857..3189)
                     /gene="trxA"
                     /locus_tag="WJJ54_001396"
     CDS             complement(2857..3189)
                     /gene="trxA"
                     /locus_tag="WJJ54_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HEZ7342256.1"
                     /translation="MSSELIVHTSDAAFEKDVLNADIPVLLDFWAPWCGPCKMIAPIL
                     DDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLT
                     AFVEASIA"
     gene            3487..3960
                     /locus_tag="WJJ54_001397"
     CDS             3487..3960
                     /locus_tag="WJJ54_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ7342257.1"
                     /translation="MTDFSVWETAPFGATVDHILQRYHNVHRAQFEELVPLAQKVAQV
                     HADTFPAEIAGLLAYMQNELLMHMMKEERMLFPMINQGVGRGAAMPIGVMMHEHEEHD
                     RAIARLKELTDNFQPPEGACGSWTRLYALAKEMVEDLNDHIHLENDILFARVLDS"
     gene            complement(4030..4851)
                     /gene="nadE"
                     /locus_tag="WJJ54_001398"
     CDS             complement(4030..4851)
                     /gene="nadE"
                     /locus_tag="WJJ54_001398"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HEZ7342258.1"
                     /translation="MMRIFSTGGKMDTQAVITHIVRWLDEYAARANAKGFVVGVSGGI
                     DSAVVSALAARTGRTTLLLDMPIRQHPDQLERARLHIRNLQRQYANVSAQTVDLTDTF
                     QTFEQTVGVHQTAFDNQPLSLANARSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGF
                     FTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGAS
                     YPELEWAMGVYGTRKPEDFEGRQREVLEIYTRLHRAMQHKINPIPVCRIPPELLG"
     gene            5048..6403
                     /locus_tag="WJJ54_001399"
     CDS             5048..6403
                     /locus_tag="WJJ54_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEZ7342259.1"
                     /translation="MSDFFHSDVLSVSELNAFAKSILENHLAGLWIAGEVSNLTRAAS
                     GHYYFSLKDSRAQVRCAMFKGAAARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEV
                     RLKGLGQLYEAYERLKAQLQAEGAFAAERKKPLPARPQCIGIVTSLAAAALRDVVTTL
                     KRRAPEIPVIVYPTPVQGAGSELQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNE
                     EPVVRAIEACTVPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQ
                     AQGRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRA
                     HTARFERQTQALQHYRPDVSVCKNNIVRLQTALSHAFHQLLTHRRQSLTAQAALLEAV
                     SPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADGETDVRVSKEQGQQDLFDC
                     I"
BASE COUNT         1560 a         1764 c         1829 g         1622 t
ORIGIN      
        1 gtactggttt ttgttaatcc actatattgc agattaatcc tttgggtatc aaagccgggc
       61 ggtgttgaaa cattgcaaaa atgccgtctg aaactcgaaa tcggtttcag acggcattgg
      121 tttatgaggc aggttggggc ttagcggtct ttgtaacggc gttcgctttt gcctgcaaaa
      181 gaatcgccgg ctttgcgttt gcctttgaag ccttcgccgg tttttttgaa accgtctttc
      241 ttaaagcctt ctttcttgaa accttcgccg cgcgttttgc cgccgaagcc ttctttgccc
      301 ggtttatgat cgccgcgctg gccgccggct ttacgatcgc cccagccgcc tttgcctttc
      361 ggtttgccgc cggccggttt gcgtttgcgt gtcggttcca tgccttcgat ggtcagttcg
      421 ggcagtttgc ggccgatgta tttttcgatt ttgtggactt tgacgtattc gttcacttcg
      481 gcaaaagtaa tcgcaatacc cgtgcgtcct gcccgaccgg tacggccgat gcggtgaacg
      541 tagtcttccg cctgtttcgg caggtcgtag ttgataacgt gggtaatggt cggtacgtcg
      601 ataccgcgtg cggcaacgtc ggtggcaacc aaaattttgc agcggccttt gcgcaaatcc
      661 atcagcgtgc ggttgcgcca gccttgcggc atgtcgccgt gcaggcagtt ggcggcgaaa
      721 cctttttcgt acaattcatc cgcgatgact tcggtcatcg ctttggtgga cgtgaaaatc
      781 acgcattggt cgatgtcggc atcgcgcagg atgtggtcga gcaggcggtt tttgtgacgc
      841 atatcgtcgc agtacagcag ttgttcttcg attttgcctt gatcgtccac gcgttcgact
      901 tcgatgattt cagggtcttt ggtcagtttg cgcgccagtt tgccgaccgc gccgtcccaa
      961 gtggcggaga acaacaaagt ctgacggtcg ctcggcgttg cttccacgat ggtttcgatg
     1021 tcgtcgataa agcccatatc caacatacgg tcggcttcgt ccaaaatcag cacttccaaa
     1081 cgttcaaaat caactttgcc gctttgcatc aggtccatca gacggcccgg cgtggcgaca
     1141 atcagatcga ccggtttgct cagggcacgg gtttggtagc cgaaagacgc gccgccgacg
     1201 atgctgacgg tgcggaacca acgcatattt ttggcatacg ccagcgcgtt tttctcgact
     1261 tgagccgcca gttcgcgggt cggggtcaac accaaagcac gcgggccttt gcccggtttt
     1321 tcgctgcgtt tggtcagttt ttgcaaagtc ggtaacagaa aggcggcggt tttgccggag
     1381 ccggtttgcg ccgaagccat aatgtcgcga ccttccaagg cggacggaat cgcctgcgcc
     1441 tgaatcgggg tcgggctttc gtaaccctcg ctgctgacgg cggacaagat gtttttatca
     1501 aggttcaaat cggcaaattt aatagacatg gctatccttg gaagacaaca acgcccgcgt
     1561 ccgaaaggtt cagacggcct gaagcaggga agggtaacga tacggggaat gtgaagttac
     1621 agggttgtcg caagcggctt gcttgtggtt tacatcgacg gcaacctgca cagatacgct
     1681 ttgtaaaatc aaagcaacag aagaaacgcg cccgtaaggg cggtttaggt tggaaggcga
     1741 tggcttcgta tgacaagata agcggtggat ggtatagggt ttgcccgaaa cggtcaagca
     1801 atcgggcgtt aattacagta aaattgccgt tttccacttt attccgcctg aaaccaatga
     1861 ccgacatcac accgtttgcc aaccgcttgg gcaaaaacat caaacacctt atgaaatggg
     1921 cgaaacgcaa cggcatcgaa gcctggcgca tttacgaccg cgacatccca caattcccct
     1981 tcgccgtcga tgtttacggc gaccaaatcc accttcagga atacgatacc ggctggctga
     2041 tgcagcccga agaatacgaa gcgtggcttg ccgaagtctt ggaagccgtc gccttcgtta
     2101 ccggttttgc gcccgaacaa atccgcctca aacgccgcga acgccaaaaa ggtttgcagc
     2161 agtacgagaa aaccggcaag gcgggcgaag atttcgtcat caccgaaaac ggccgcaagt
     2221 tttgggttaa ccttgataag tatttggata cggggctttt tttggatcat cgaaacacgc
     2281 gcaaaaaagt cggcgaaacg gcggcgggca aacgtttttt aaacctgttt tcctacactg
     2341 gcagcttcac cgtctatgcc gccaccggcg gcgcggcatc cagcgaaact gtcgatttgt
     2401 cgaacactta tctcgattgg gcgagacgca attttgaatt gaacggcatc gatacggaac
     2461 ggcacaaaat cgtccgcgcc gacgtgttcc aatatcttca gacggcatat ggggaaggca
     2521 ggcagttcga cctcattgtg atggatccgc ccagtttttc caacagcaag aaaatgtccg
     2581 acatcctcga cattcagcgc gatcacaaaa agctgattga cggcgcggtg aagctgctcg
     2641 cttcagacgg cattttgtac ttttccaaca acctgcgcag cttcgtctta gacgacttgg
     2701 tatcggaaca atacgccgtc aaagacattt ccaaacaatc cgttcccgaa gatttccgca
     2761 acaaaaaaat ccataggtgc tgggaaatcc gccacaaatc ttaagggtgc gaaaaagccg
     2821 ccggaatctt ccggcggctt tttcgattgc gctttatcag gcgatagagg cttcgacaaa
     2881 ggcggtcagc tgaccttttg ccaatgcgcc gactttggtg gcgacgactt cgccgttttt
     2941 gaacaccatc agggtcggaa tgccgcgcac gccgaaacgg gacggggtgg cttcgttgtc
     3001 gtcgatgttg attttgacca ctttcagacg gccttcaaat tcggcggcaa tgtcgtccaa
     3061 aatcggggca atcattttgc aggggccgca ccacggagcc caaaagtcca gcaggacggg
     3121 gatatctgca tttaaaacgt ctttttcaaa agcggcatcg ctggtgtgta caattaattc
     3181 gctgctcatt atttttcctt ttcggttggg attggcacga tagcgtgcag gatagggctt
     3241 gggcataaaa atttcaagtg ggcgggcggg ataatagttt ttctgtaccg ccccaatcgc
     3301 ctttgcaaat tctaaaaaac ggttcggaca gtattttatt tctgaaaatt acttttatta
     3361 tcaaaatgta aggaatacgt ttgaggctgt acagaagcgc gcgggcggtg tatgctccgt
     3421 ttgaattgat tcttaaagta tgaatgttca aaaccaaacc cgaaaccctg taaaaggaac
     3481 actgcgatga ctgatttttc cgtttgggag accgccccct ttggtgcaac cgtcgatcat
     3541 atcctgcaac gctaccacaa tgtccaccgc gcacaatttg aagaattggt gccgctggcg
     3601 cagaaagtgg cccaagtcca tgccgatacc tttccggcag aaattgccgg gctgcttgcc
     3661 tatatgcaga acgaactgct gatgcatatg atgaaggagg agcggatgct gtttccgatg
     3721 attaatcagg gtgtcggacg cggtgcggcg atgcccatcg gcgtgatgat gcacgaacac
     3781 gaagaacacg accgcgccat cgcacggctc aaagagctga ccgacaattt ccaaccgcca
     3841 gaaggggctt gcggaagctg gacgcggctt tacgcgctgg cgaaagaaat ggtggaggat
     3901 ttgaacgacc acattcattt ggaaaacgat attttgtttg cccgcgtact cgattcttaa
     3961 gggataggag tcggatattt ccatgccgtc tgaaatacgg ttttccgttt cagacggcat
     4021 ttccgtgttt cagcccagca attcgggcgg aatgcggcac acgggaatcg ggttgatttt
     4081 gtgctgcatc gcgcggtgca gccgcgtata gatttccaga acttcgcgct gccgcccttc
     4141 aaaatcttcg ggtttgcgcg tgccgtacac gcccattgcc cactccagtt cgggatagct
     4201 tgcgcccatc tgttcttcgt cggtgcgttc cgtatcccac aggccgtcgg tcggcggggc
     4261 tttttgaatc gcctcgtcca cgcccaatgc ttcggcaagc cggtaaacct gggttttggt
     4321 caggtcggca atcgggctga tgtccacgcc gccgtcgccg tatttggtaa aaaatcctac
     4381 accgaaatct tcaattttgt tacctgtccc cgtaaccagt agtccgtgta tctgcccgta
     4441 gtagtacagg gtcagcatac gcaggcggct tctggcgttg gcgagggaaa gcggctgatt
     4501 gtcaaatgcc gtctgatgaa cgccgacggt ttgttcaaag gtctggaagg tgtcggtcag
     4561 atcgaccgtt tgtgcgctta cattggcata ttgccgttgc agattgcgga tgtgcagcct
     4621 tgcccgctca agctggtcgg ggtgttggcg tatcggcata tccagaagca gcgtggtgcg
     4681 gccggtgcgg gcggcgagtg cggagacgac ggcggaatcg atgccgccgg aaacgcccac
     4741 gacaaaccct tttgcatttg cccgggcggc gtattcgtcc aaccatcgga caatatgtgt
     4801 gataactgcc tgcgtatcca tttttcctcc tgtcgaaaat atccgcatca tagcttgtcg
     4861 gcggtgtaat ttgaatagat tgagggcggg ttgatgaata tttttcccat tccccgctta
     4921 aaaaagtcat acgggaaaag gcgggcggca agatggcgcg tgttataata ttgttgacaa
     4981 tttaggcggc ccgatgccgc cttgggcttc aaaacatatt catatttttt attatttgat
     5041 tgattcgatg tctgattttt ttcattctga cgtgttgtcc gtttccgagt tgaatgcatt
     5101 tgccaaaagt attttggaaa accaccttgc cggtttgtgg attgccggcg aagtgtccaa
     5161 cctgacccgc gccgccagcg gacattatta cttctcgctt aaagacagcc gcgcgcaggt
     5221 gcgttgcgcg atgttcaaag gtgcggcggc gcgtttggcg aagcctttga aagaaggcga
     5281 tcatatcgag gtatcaggaa aaatcagtat ttacgaggcg cggggcgaat ttcaaattac
     5341 cgtaaacgaa gtacggctca aaggtttggg gcagctttac gaagcctatg agcggttgaa
     5401 ggcgcagttg caggcggaag gcgcgtttgc ggcggaacgc aaaaaacctc tgcctgcccg
     5461 accgcaatgt atcggcatcg taaccagttt ggcggcggcg gcattgcgcg atgtcgttac
     5521 caccttgaaa cgccgcgcgc ccgaaattcc cgttatcgtt tatccgacac ctgttcaagg
     5581 cgcaggcagc gagttacaaa ttgcccaagc gattaaaacc gcctcgcaac gcgccgaatg
     5641 cgacgtgttg attgtctgtc gcggcggcgg cagcattgaa gacttgtggg cgtttaacga
     5701 agaaccggtc gtgcgcgcaa tcgaagcctg cacggttccc gtcgtcagtg gcgtgggaca
     5761 cgaaaccgat tttacgcttg ccgattttgt cgccgacgtg cgcgcgccca cgccgaccgg
     5821 tgcggcggag ctggtcagcc ccaaccgcca agaatcgcta catcgtctcg ctcaggcgca
     5881 aggccgtctg aaaaccgttt tggaacaacg ctatttcgat gccagccaaa aactcgactg
     5941 gcttgcgcgg caaatccgtc atccgcgcca aaaacttgat gagcagcgcg cttcaatcgg
     6001 caagctggcg caaacgctgt cttactcgat gaagcaaaac ctccgtgccc acaccgcccg
     6061 tttcgaacgc caaacccaag ccctgcaaca ttaccgtcct gatgtttccg tttgcaaaaa
     6121 caacatcgtc cgccttcaga cggccctgtc gcacgccttc caccaactgc ttacccaccg
     6181 ccgccaaagc ctgaccgccc aagcagcatt gctcgaagcc gtttcgccgc agcacattct
     6241 ggagcgcggc ttttccgtcg tcaaaaacac acgcggacaa gtcatccgca acgccgatgt
     6301 tttgaagcag gggcagaagc tgcacattat cttcgccgac ggcgaaaccg acgtgcgcgt
     6361 aagcaaagaa caagggcagc aggatttgtt cgattgcatt taaacccaat cggaaaaacc
     6421 gctccccctc cgccgtcatt cccgcgaaag cgggaatcca gtcccttgac cttaagataa
     6481 tctttaattc gtcattcctg aaaaagcggg aatccggaag cgaaaagtgg tgggaatgta
     6541 ttagaaatga ctgaaactca aaaaaccgga ttcccgccta cgcgggaatg acgagtcaga
     6601 agttactcga aacttaaaaa aaacgaaatc gaacggactg gattcccgcc tgcgcgggaa
     6661 tgacgagtca gaagttactc gaaacttaaa aaaacgaaat cgaacggact ggattcccgc
     6721 ctgcgcggga atgacgattg atacgtttcg ataatttatt gaagatggct gaaat
//
LOCUS       DAWKJW010000103         6772 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.103, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000103 DAWKJW010000000
VERSION     DAWKJW010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6772
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.103"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(98..1231)
                     /gene="nrdB"
                     /locus_tag="WJJ54_001400"
     CDS             complement(98..1231)
                     /gene="nrdB"
                     /locus_tag="WJJ54_001400"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HEZ7342260.1"
                     /translation="MSYSTFPKTKNDALNEPMFFGQPVNVARYDQQKYEVFEKLIEKQ
                     LSFFWRPEEIDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAEDIACYYDD
                     LIEYTQYYNLLGEGVHNVGGKPVTVSLRGLKKKLYLCLMCVNVLEAIRFYVSFACSFA
                     FAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQL
                     FKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPI
                     PWINAWLSSDNVQVAPQEVEISSYLIGQIDSEVNTDDLGDFEL"
     gene            complement(1292..2479)
                     /locus_tag="WJJ54_001401"
     CDS             complement(1292..2479)
                     /locus_tag="WJJ54_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II restriction enzyme"
                     /protein_id="HEZ7342261.1"
                     /translation="MNDLAAQTIQVVNKSDDLVASAIQTANKSIAVYCRYIRPNDVGT
                     TGSHQSGFYIQKHFSDDLFDVVCQKGTNKTISIKINWQDGSVTNSNFKYYGQGTRNEA
                     RITGFGKNFEFLSDKYSGSLLVLCRACYKDLLFHAFVLSSDEDIEIFIAETNILPGSL
                     YLPKKQEVEDNLTKLFSLFPNFPKTEEMAVLARENIALNKTNVSNVLKQWVSKEYELF
                     SIFEKREFEIIKSKITDLDSFINFAHSFTNRRKARAGKSLELHLSRIFDEFSLKFETQ
                     AKTEGKKKPDFLFPGSEEYHAMDESGNFIFQTEKLTMLGSKTTCKDRWRQVLNEADRI
                     PHKHLFTLQEGISDTQIQEMSDENLTLVVPKESVKTFGTFGKTHVLTLENFIKYIKSQ
                     QVS"
     gene            complement(2472..3485)
                     /gene="dcm"
                     /locus_tag="WJJ54_001402"
     CDS             complement(2472..3485)
                     /gene="dcm"
                     /locus_tag="WJJ54_001402"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ7342262.1"
                     /translation="MKNKIQNQLDNIVTLNNEKFTFIDLFAGIGGFRIAMENVGGRCV
                     FSSEWDDKARQTYQVNFNDIPYGDITLKETKAAIPSKFDVLTAGFPCQPFSIAGVSKK
                     KSLGRETGFLDKAQGTLFFDVAEIIGKHRPKIFLLENVKNLVSHDKGNTFKVIKGTLE
                     ELDYQIFYQVMNAKYYVPQNRERIFIVGFDRQYFNKEINFNFPSPPESQPKLKQILED
                     DVDNSFTLSDNLWLYLQNYAKKHKAKGNGFGFGLVDLDGISRTLSARYYKDGSEILIP
                     QKGKNPRKLTPRECSRLMGFPKDFVIDAVSKTAAYKQFGNSIAVPLVQAIAKQIINEL
                     KNE"
     gene            complement(3543..5822)
                     /gene="nrdA"
                     /locus_tag="WJJ54_001403"
     CDS             complement(3543..5822)
                     /gene="nrdA"
                     /locus_tag="WJJ54_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEZ7342263.1"
                     /translation="MNTPTDLKVTKRDGRLEAIDLDKIHRVVTWAADGLENVSVSQVE
                     LKSHIQFYNGIRTDDIHETIIKAAADLISEDTPDYQYLAARLAIFHLRKIAYGEYEPP
                     HLYDHVKKLTDAAKYDRHILEDYSREEFDELNAYIDHERDMSFSYAAVKQLEGKYLVQ
                     NRVTRQIYETPQFLYVLVAMCLFSKYPKETRLDYVKRFYDAVSTFKVSLPTPIMSGVR
                     TPTRQFSSCVLIECDDSLDSINATTSAIVKYVSQRAGIGINAGRIRGLDSEIRGGEAR
                     HTGCIPFFKMFQAAVKSCSQGGVRGGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQ
                     LDYGVQINRLLYTRLIKGGNITLFSPNEVPGLYEAFFADQDEFERLYTKYEQDPDIRK
                     RIIPAADLFSTLMQERAGTGRIYIQNVDHCNTHSPFDPRVAPVHQSNLCMEIALPTKP
                     LDNINDPNGEIALCTLSAFNLGALNSLDELEGLADLTVRALDALLDYQGYPVEAARTS
                     TMGRRSLGIGVINYAYYLAKNGVRYSDGSALGLTHRTFEAIQYYLLKASANLAKEYGA
                     CTLFNQTVYSQGKLPIDTYKKDLDAVCGEPLHYDWESLRAEIVKYGLRNSTLTALMPS
                     ETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPEFETLKNAYETLWQLPGNEGYLK
                     LVGVMQKFVDQSISANTAYDPGKFEGGKVSMKQMLKDLLTAYKYGVKTLYYHNTRDGA
                     DDTQTDIQDDGCAGGACKI"
     gene            6351..6662
                     /locus_tag="WJJ54_001404"
     CDS             6351..6662
                     /locus_tag="WJJ54_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein"
                     /protein_id="HEZ7342264.1"
                     /translation="MLAILLSAILGLVSTTAAAGTSEPAHRHTKHIRKANKQMLHPEC
                     RKYLERRAAWYRSQGNVQELRENKKARKAFRSLPYKEQKTQCQAAYEAFDDFDGSRFR
                     R"
BASE COUNT         1806 a         1515 c         1445 g         2006 t
ORIGIN      
        1 gaacaataac cgatcctacc cgctgttttt cccatcatac aacatacaaa tgccgtctga
       61 aacatccggc ttcagacggc attttttcaa aaaacgttta caactcaaaa tcgcccaaat
      121 catccgtatt cacttcagaa tcgatctgac cgatcaaata agaggatatt tccacttcct
      181 gcggcgcgac ctgtacgtta tcggacgaca gccacgcatt aatccacgga atcgggtttt
      241 gatttgcgcc ttcaaatccg gccggcaacc ccaccgcctg catacgcaga ttggtaatat
      301 attcgacgta ttgggataag atttctttgt tcaaaccgat catcgaaccg tccttaaaca
      361 aatatgccgc ccactctttt tcctgttccg ccgctttttt gaagagttgg aaacattcgt
      421 cctgcaactc ggcggcaatt tctgccattt cagaatcatc gacacccgaa cgcatcagat
      481 taagcatatg ctgcgtgccg gtcaggtgca gggcttcgtc gcgggcaatc agtttgatga
      541 ttttggcgtt gccttccatc aactcgcgct cggcaaaagc aaacgagcag gcgaatgaaa
      601 cgtagaaacg gatggcttcc aacacattga cgcacatcag gcagagatag agttttttct
      661 tcaacccgcg caaagacacg gtaacgggtt tgccgccgac attgtgcacc ccttcgccca
      721 acaggttgta atactgggtg tattcgatta agtcatcgta atagcaggca atgtcttcgg
      781 cgcgggcggt aatgtattcg ttttcgacaa tatcatcaaa cacgaccgac ggatcattca
      841 caatattgcg gatgatgtgg gtatagctgc gcgagtggat ggtttcgctg aagctccacg
      901 tttcaatcca cgtttccaac tcgggaatcg aaaccaaagg cagcaaagca acattcggac
      961 tgcgcccttg gatggaatcg agcagtgttt ggtatttcag attgctgatg aaaatatgtt
     1021 tttcgtgttc tggcaggttg gcgtagtcga tacggtcgcg cgacacgtcg atttcttccg
     1081 gccgccaaaa aaacgacaat tgtttttcaa tcagtttttc aaatacctcg tatttctgct
     1141 ggtcataacg ggcgacatta accggctgac cgaaaaacat cggctcattc agcgcgtcgt
     1201 ttttggtttt gggaaaggtg ctgtatgaca tagttaagtg ttcgcaggac ataatctatt
     1261 ctctatatta attaaaaatg atctgtaagt tttaactaac ctgctgagac tttatatatt
     1321 taataaaatt ttctaaagtt aaaacatggg ttttcccaaa agttccaaat gtttttacgg
     1381 attctttagg gacaactaag gttaaattct catcactcat ttcctgaatt tgagtatcag
     1441 atataccttc ttgtagagta aataaatgct tatgaggaat tcgatctgct tcatttaaaa
     1501 cttggcgcca gcgatcctta caagtagtct ttgaacctag cattgtcagc ttttcagttt
     1561 gaaatatgaa attccctgat tcatccatcg catggtactc ttcacttcca ggaaataaaa
     1621 aatctggttt ctttttccct tctgtcttcg cttgcgtctc aaattttaag gaaaattcgt
     1681 caaatattct tgataaatgt aactctaaag attttcctgc tcttgctttt ctgcgatttg
     1741 taaaagaatg tgcaaaatta atgaagctat ccaaatcagt aatttttgat ttaataattt
     1801 caaattcacg tttttcaaaa atggaaaata attcatattc ctttgaaacc cattgtttta
     1861 acacattact aacgttagtt ttatttaatg caatattttc ccttgccaaa actgccattt
     1921 cttcagtttt ggggaagtta ggaaatagtg aaaataattt tgttaggtta tcctctactt
     1981 cttgtttttt aggtaaatat aaacttcctg gtaaaatgtt agtttctgcg ataaatattt
     2041 caatatcttc atctgaagat aaaacaaaag catggaataa taaatcttta taacaagctc
     2101 tgcacaatac caataaggaa ccactatatt tatcacttaa aaattcaaaa ttcttgccaa
     2161 aacccgtaat tctcgcctca tttctcgtgc cttggccgta atatttaaaa ttgctattag
     2221 tgacgcttcc atcttgccaa ttaattttga ttgaaatagt tttatttgtt cccttttggc
     2281 aaactacatc aaagaggtcg tctgaaaaat gtttttgaat ataaaatcct gattggtgac
     2341 taccagtagt accaacatca ttgggacgaa tataacgaca gtatactgca attgatttat
     2401 ttgctgtctg tattgctgaa gctactaagt catcggattt atttactact tgtattgtct
     2461 gagctgccaa gtcattcatt ttttaactca tttataattt gtttagcaat agcttgaacc
     2521 aacggtacag caattgaatt gccaaactgc ttgtatgcag ctgtcttgga tactgcatca
     2581 ataacaaaat ctttaggaaa tcccattaaa cgcgagcact ccctaggtgt cagcttccta
     2641 ggattttttc ctttctgagg gatgagtatt tcggaaccat ctttgtaata tcgtgcagat
     2701 agagttcgtg atattccatc taaatcaact aatccaaaac caaatccatt accctttgcc
     2761 ttatgttttt tagcgtaatt ttgaaggtaa agccataagt tatcagaaag agtaaaagaa
     2821 ttatctacat catcttccaa aatttgcttt aattttggtt gtgattctgg tggggaagga
     2881 aaattgaaat ttatttcctt attaaaatat tgtctatcaa aacctacaat aaaaatacgc
     2941 tccctatttt gaggaacata atattttgca ttcataactt gataaaatat ctgatagtca
     3001 agctcttcta aagtcccttt aattacttta aatgtatttc ctttgtcatg cgaaacaagg
     3061 tttttcacat tctctaaaag aaaaatttta ggtcgatgtt ttccaataat ttcagcaaca
     3121 tcaaaaaata gagttccctg cgccttatct aagaagcctg tttctcgtcc taggcttttt
     3181 ttctttgaaa caccagctat agagaatggc tgacacggga atcctgctgt taatacatca
     3241 aacttacttg gaatagctgc tttggtttcc tttaatgtaa tatctccata aggaatatca
     3301 ttaaaattta cttggtaggt ttgacgggct ttatcatccc attcactaga aaatacacat
     3361 cgcccaccaa cattctccat tgcaatgcga aaaccaccta ttcccgcaaa taaatcaata
     3421 aaagtaaatt tctcattatt taaggtaact atattatcta attgattttg tattttattt
     3481 ttcatatttt atatttcaga tgatttatta atctaaaggc catctgaaaa ctcccccttt
     3541 catcaaatct tacaagcccc gcccgcgcag ccgtcatcct gaatatcggt ctgcgtatcg
     3601 tccgcgccgt cgcgggtgtt atggtagtac agggttttga cgccgtattt gtaggcggtc
     3661 agcaggtctt tgagcatttg tttcatagaa actttgccgc cttcgaattt gcccgggtcg
     3721 taggcggtat tggcggaaat cgattgatcg acgaattttt gcatcacgcc gacaagtttc
     3781 aggtagcctt cgttgccggg aagctgccac agggtttcat aggcattttt cagggtttca
     3841 aactccggca cgacttgctt cagaatgccg tctttcgatg ctttgaccgt taccaatccg
     3901 cgcggcggct cgatgccgtt ggtggcgttg gcgatttgag agctggtttc agacggcatg
     3961 agcgcggtca gagtagagtt gcgcaggccg tatttgacga tttcggcacg caggctttcc
     4021 caatcgtaat gcaaaggctc gccgcagacg gcatccaaat cttttttgta ggtgtcgatg
     4081 ggcagtttgc cttgcgaata aacggtttgg ttaaagagcg tacacgcacc gtattctttg
     4141 gcaaggtttg ccgatgcttt gagcaggtaa tactgtatgg cttcaaaggt acggtgggtc
     4201 agaccgagcg cggagccgtc gctgtagcgg acaccgtttt tcgccagata ataagcatag
     4261 ttgatgacgc cgatgccgag cgaacggcga cccatagtag aggtacgcgc ggcttctacc
     4321 ggatatccct gataatctaa aagtgcatcg agtgcgcgca cagtcaaatc ggcaagccct
     4381 tccaattcgt ccaggctgtt taatgcgccc aagttgaagg cggacagggt acacagggcg
     4441 atttcgccgt tcggatcgtt gatattgtcc agcggtttgg tcggcagggc gatttccata
     4501 cacaagttgg actgatgaac aggcgcgacg cgcggatcga acgggctgtg cgtattgcag
     4561 tgatcgacgt tttgaatgta gatgcgcccg gttccggcac gctcctgcat cagcgtggaa
     4621 aacaggtcgg cagccggaat gatgcgcttg cggatatcag ggtcttgctc gtatttcgta
     4681 tagagccgct caaattcgtc ttggtcggca aaaaacgctt cgtacaatcc cggaacctcg
     4741 ttgggcgaaa acagcgtaat gttgccgccc ttaatcaggc gggtgtacag taggcggttg
     4801 atttgcacac cgtaatcaag ctggcggata cggttgtctt ccacgccccg gttgtttttc
     4861 aacaccagca ggctttcggc ttcgatatgc cacaaggggt agaacaaggt tgccgcgccg
     4921 ccgcgcacgc cgccttgcga acaggatttg accgccgcct gaaacatttt gaaaaacggg
     4981 atgcagccgg tatgccgcgc ttcgccgccc cggatttcgc tgtccaaacc gcggatacgt
     5041 ccggcattga tgccgatgcc cgcacgctgg gaaacgtatt tcacaatcgc gctggtagtg
     5101 gcattgatgg aatccaaact atcgtcgcat tcaatcagca cacagcttga gaactggcgc
     5161 gtaggcgtac gcacgccgct cataatcggg gtcggcagcg atactttaaa tgtggaaacg
     5221 gcatcgtaaa accgtttgac gtaatcgagg cgtgtttctt tgggatattt gctgaaaaga
     5281 cacatcgcca ccagaacata taagaactgc ggtgtttcat aaatctggcg ggtaacgcgg
     5341 ttctgtacca gatatttgcc ttcgagctgt ttgacagcgg cataggaaaa ggacatatcg
     5401 cgttcgtggt cgatataggc gttcagctcg tcaaattctt cgcggctgta atcctcaagg
     5461 atatgcctgt cgtattttgc ggcatcggta agttttttaa cgtggtcgta aaggtgcggc
     5521 ggctcgtact cgccgtaggc tattttacgc agatggaaaa tcgccaaacg cgcggcaagg
     5581 tattggtagt ccggggtatc ttccgaaatt aaatcggcag cggctttgat gatggtttcg
     5641 tggatgtcgt cggtgcggat gccgttgtag aactggatgt gcgatttcaa ctcgacctga
     5701 gatacggaaa cattttccaa tccgtccgcc gcccaagtga cgacacggtg aatcttatcc
     5761 aaatcaatgg cttctaatct tccgtctcgt ttggttactt tcaaatcagt cggtgtattc
     5821 atcgcttcct cttccactct tgatattcaa gacacagtct tttcaaataa attaaggcag
     5881 acaatatagt ggatttttgg cattttctcc agtcttgaca acggttgcat ttttcagttt
     5941 caggcaatgc gcgataaaac ccgcctgtcg tatttttcct ataatatttg ttttatctga
     6001 taattcttta ccgataaaaa acgggtaaat tttttgcctt ttgaccggct ccggctacaa
     6061 ggcggtgaaa taaggatttt ccgacgaaaa aggaaagctt ccggttttct gcccctgcga
     6121 attgttaaat tttgcaaagt atgattttgc cgcgccgccg ccgacaaatt ccattttctt
     6181 accgattgaa atttattatt gagattaatg tgttatttga atccgcatat caaacggcaa
     6241 gttttgtcgg ctgaatgagt ctgaaactgc cgacaatttg cccgttccat ccttccatcc
     6301 tatactggaa ggaatgacaa actgaaagga tcgtcatatc tgtcaaaaag atgcttgcca
     6361 tactgttgtc tgcaatattg ggactggtat cgacaactgc cgctgccggt acgtcagaac
     6421 ccgcccaccg ccataccaaa catatccgca aggcaaacaa gcagatgctg caccccgaat
     6481 gcaggaaata tttggaacgc cgtgccgcgt ggtaccgatc gcaaggcaac gtgcaggaat
     6541 tgcgcgaaaa caaaaaggcg cgcaaagcat tccgctccct gccttataag gaacagaaaa
     6601 cccaatgcca ggcggcttat gaggctttcg atgatttcga cggcagcagg ttccgccgtt
     6661 aatcccatat aaaatatgcc gtctgaacac aggttcagac ggcatatttt atgaatacaa
     6721 caaactatcc ttacgccatt tcgtttgagg tcctcccgtt gccgcagcct ta
//
LOCUS       DAWKJW010000104         6751 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.104, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000104 DAWKJW010000000
VERSION     DAWKJW010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6751)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6751)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6751
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.104"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(110..469)
                     /gene="rplT"
                     /locus_tag="WJJ54_001405"
     CDS             complement(110..469)
                     /gene="rplT"
                     /locus_tag="WJJ54_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005795139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEZ7342265.1"
                     /translation="MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQ
                     YAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFD
                     KAAFAQLVEKAKAALAA"
     gene            complement(482..679)
                     /gene="rpmI"
                     /locus_tag="WJJ54_001406"
     CDS             complement(482..679)
                     /gene="rpmI"
                     /locus_tag="WJJ54_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012698199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEZ7342266.1"
                     /translation="MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQL
                     RGTSMVNDRDLASVAKMLPYA"
     gene            complement(826..1347)
                     /gene="infC"
                     /locus_tag="WJJ54_001407"
     CDS             complement(826..1347)
                     /gene="infC"
                     /locus_tag="WJJ54_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEZ7342267.1"
                     /translation="MIAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQ
                     DVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDEGDY
                     QIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKME
                     GRQMVMMIAPKKK"
     gene            complement(1365..3278)
                     /gene="thrS"
                     /locus_tag="WJJ54_001408"
     CDS             complement(1365..3278)
                     /gene="thrS"
                     /locus_tag="WJJ54_001408"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEZ7342268.1"
                     /translation="MLNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKL
                     VDACDPIVENSAVQIITPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGF
                     YYDIATEKPFTPEDVAAIEARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLI
                     DDMSEVEAMGMYHHQEYVDMCRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIY
                     GTAWATKDELKAYIQRIEEAEKRDHRKLGKQLDLFHLQDEAPGMVFWHSKGWALWQVI
                     EQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKDNMFVTSSEKREYAVKPMNCP
                     GHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQI
                     VSEARAFNELLVRIYKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVE
                     WGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPERLGAEYVTENNDRSRPVM
                     LHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGF
                     RAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRKAEDLGSLDLDDFIA
                     QLQQEITDALVNH"
     gene            complement(3332..3408)
                     /locus_tag="WJJ54_001409"
     tRNA            complement(3332..3408)
                     /locus_tag="WJJ54_001409"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3372..3374),aa:Val,seq:gac)
     gene            3588..4703
                     /gene="tgt"
                     /locus_tag="WJJ54_001410"
     CDS             3588..4703
                     /gene="tgt"
                     /locus_tag="WJJ54_001410"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEZ7342269.1"
                     /translation="MLKFTLHKKDGYARRGTLELNHGKIETPVFMPVGTYGSVKAMNP
                     QNLHDIKAQIILGNTYHLWLRPGLEVVEQFGGLHGFIGWDKPILTDSGGFQVFSLSDM
                     RKLTEEGCTFKSPINGDKLFLSPEISMKIQTVLNSDIAMQLDECTPGEATREQAKKSL
                     QMSLRWAERSKKAFEDLKNPNALFGIVQGAMYEDLREESLRGLEQFDFPGLAVGGLSV
                     GEPKPEMYRMLRAVGPILPEHKPHYLMGVGTPEDLVYGVAHGIDMFDCVMPTRNARNG
                     WLFTRFGDLKIKNAKHKLDKRPIDESCTCYACQNFSRAYLHHLHRAGEILGAQLNTIH
                     NLHFYQVIMAEMREAVEQGKFADWQAQFHENRARGTD"
     gene            4713..5795
                     /locus_tag="WJJ54_001411"
     CDS             4713..5795
                     /locus_tag="WJJ54_001411"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEZ7342270.1"
                     /translation="MPSEAASDGILPLYPTRTIFQKPIMLPFLPEPSLSYTQQNRTAV
                     LLLNLGTPDAPTAQAVRPYLKSFLTDRRVVELPKWLWYPILHGLVLTLRPKKSAHAYE
                     KIWFKEGSPLEVYTARQAAALAKRMPDLIVRHAMTYGNPSVADVLSELKAQGAGRLLV
                     IPMYPQYAASSSGAAVDKVCEQLLLQRNQMSVRTVSRFYDDTGYIDAMKNHILRYWAE
                     HGRGKKLMLSFHGVPQKHHDLGDPYPDECRHTAKLLAEALELTEDQYVVSFQSQFGRA
                     KWVTPSTQDLFGKLPKQGVTELDVFCPGFLADCLETMEEIALMGREQFYEAGGKSYRY
                     IPCLNDNPDWIDALVALAEENLGGWR"
     gene            5986..6387
                     /locus_tag="WJJ54_001412"
     CDS             5986..6387
                     /locus_tag="WJJ54_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEZ7342271.1"
                     /translation="MNTTRLPTALVLGCLCAAASAADNSIMTKGQKVYESNCVACHGK
                     KGEGRGTMFPPLYRSDFIMKKPQVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADI
                     AAVATYIMNAFDNGGGSVTEKDVKQAKGKKN"
     gene            complement(6450..6740)
                     /locus_tag="WJJ54_001413"
     CDS             complement(6450..6740)
                     /locus_tag="WJJ54_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342272.1"
                     /translation="MAKYFTETGIGVREHFDFFGEFVVSPAARSGDLALAYGLRLEAG
                     EEGLSLAELFDKRSDSQEPVECGRIDIGGFMLTAKEVDGGGNIGSMGLKVPR"
BASE COUNT         1726 a         1846 c         1566 g         1613 t
ORIGIN      
        1 aacgcaaatt tatttaaaaa aatagacttt aaagaaagaa aatcaatcac atagaatttc
       61 tgcaaacaaa gaaaaaagga agccgcagct tccttttcaa ttttttggat taagcagcca
      121 aagcagcttt ggctttttca accaattgtg caaaagcggc tttatcgaac acggccaaat
      181 cagccaatac tttgcggtcg atttcgatag aggcacgttt cagaccattc ataaatttgc
      241 tgtaagacaa cccgttttca cgcgcacctg cattgatacg gacaatccac aattgacgga
      301 attggcgttt gcgttggcgg cggtcgcggt atgcgtattg gccggctttc attaccgcct
      361 gcttggcaac gcggtaaacg tttttacgac ggccgcgata gcctttggct aacgcgaaga
      421 ttttttggtg acgggcacgg gcggtaacac cgcgttttac gcgtggcata ttctaaactc
      481 cttaagcgta gggtaacatt ttagcaacag aagccaaatc gcgatcattt accatagagg
      541 taccgcgcag ttggcgtttg tttttggtgg tctttttagt caagatgtgg cgtttgaacg
      601 catgagcgcg tttcacaccg ccgttaccca gtactttaaa gcgttttttc gcgctagact
      661 tggttttcat tttaggcatg ggaaaactcc attcgttatc ggataaggca ttagggggtt
      721 ttaaaacatc ggtttcaaac acttgaaccc acaatgccac ggttttttgc cgcaattgaa
      781 aacttactcc gaagcggcaa tcggagtaag cggagaatta tagctttatt ttttcttcgg
      841 cgcaatcatc atcaccattt ggcgaccttc cattttggga aaggactcga tttgcgccac
      901 ttcagccaaa tcttctttca cacgttccaa aagttgcgcg ccgagttgct ggtgagccat
      961 ttcacggccg cggaaacgca atgtcacttt gactttatcg ccgtcggcaa ggaagcggtt
     1021 gatgttgcgc atcttgattt gataatcgcc ctcatccgta cccggacgga atttgatttc
     1081 cttgatttgc acctgctttt ggtttttctt ggcttcgtcg cgtttcttgg cctgctggta
     1141 tttgtattta ccgtaatcca tcagtttgca cacaggcggt ttagcagttg gggaaatctc
     1201 taccaaatcg acatcctgcc cttcggccat agccaaagct tcacgaactg aaacaacacc
     1261 aagctgttcg cctgactcac tgattaaacg cacttctttg gcggtaattt cgccgttgat
     1321 tcgtgcttcg cgttcttgag cgatgatgaa tactcctata aaaattaatg attgacgagg
     1381 gcatcagtga tttcttgctg caattgcgca atgaaatcat ccaaatccaa agaacccaaa
     1441 tcttctgctt tgcggcgtac cgccactttg ttttcctgct tctccttatc gccgacaacg
     1501 atttgataag ggaaacggta ttggctgttg tcgcggattt tgtaaccgat tttttcgtta
     1561 cgcaaatcca actcggcgcg gaatcctgcc gcctgcaatt tggcagccac ttcccgacaa
     1621 taatctgcct gattttcggt aatattcata atcaccattt gaaccggagc caaccataac
     1681 gggaaagagc ctgcatggtt ctcaatcaga atgccgataa atcgctccaa agaacctaaa
     1741 atggcgcgat gcaacataac aggtcgcgag cggtcgttgt tttcggttac atattctgca
     1801 cccaagcgtt ccggcaagac gaaatccagt tgtaatgtac cgcattgcca agaacgaccc
     1861 aaggcatctc tgacatgata ttcgatttta ggcccgtaaa acgcaccctc gcccggcaat
     1921 tcgccccatt ccacgccgca ggcagtcaat gcctcgcgca aaccctgctc tgccttatcc
     1981 cacacgtcat ctgaacctgc acgtttttca gggcgaagag aaagcttgac ggatacatca
     2041 tggaaaccga actgtttgta gatgcgaacc aacaattcat tgaacgcacg ggcctcgctg
     2101 acgatttggt cttcggtaca gaaaatatgc gcatcatcct gcacaaatcc acggacccgc
     2161 atcagaccat gcaatgcacc gctcggctcg ttgcggtggc aggaaccgaa ttccgccaaa
     2221 cgcatcggca aatctcgata cgaacgcaaa ccgttgttaa aaatttgaac atgacccgga
     2281 cagttcatcg gtttaaccgc atattcgcgt ttttccgaac tggttacgaa catattatct
     2341 ttgtagttgt cccaatggcc ggatttttcc caaaaggttt tatccatgat ttgaggcgtt
     2401 ttgacctctt tataaccggc ggcgttcagc tctttacgca tatgctgttc aatcacttgc
     2461 cacaaagccc agcctttaga atgccaaaac accatgcccg gcgcttcgtc ttgcaggtgg
     2521 aacaaatcca attgcttgcc caatttgcgg tggtcgcgct tttcggcttc ttcgatacgt
     2581 tgaatatagg ctttcaactc gtcttttgtc gcccaagccg taccgtatat gcgttgcagc
     2641 atttcattgt tgctgtcgcc gcgccagtat gcgcccgcca acttggtcag tttgaagttt
     2701 ttcaggaaac gggtattcgg aacgtgcgga ccgcggcaca tatcgacata ttcctgatga
     2761 tgatacatcc ccatcgcttc cacttcggac atatcgtcaa tcaggcgcag tttgtattct
     2821 tcgccgcgct cttgaaaaat tttaatcgcc tccgcacgcg gagtcatgat tttgaccaca
     2881 tcatagtctt gggcaatcaa ttctttcata cgcgcttcaa tggcggcaac atcttccggt
     2941 gtaaacggtt tttccgtggc gatgtcgtaa taaaagccct cttcaatgac ggggccgata
     3001 accatttttg cattaggata gagttgcttg acggcatgcc cgacaagatg cgcgcaggaa
     3061 tggcggatga tttcgatgcc ttcctgatct ttcggagtaa tgatttgaac agcagaattt
     3121 tcaacaatcg ggtcgcacgc atcgaccaat ttgccgttta ccctgcctgc caccgccgcc
     3181 ctcgccaaac cgacaccgat agacgcagca atttgagcca cggtaacggg ggattcgtat
     3241 tggcggactg agccgtccgg caaggtaatg ttcaacatca aaaagctcca aaacattaaa
     3301 aaataacggc ataaatgccg ttatgggaat ttggtaggca cgattggatt cgaaccaacg
     3361 acccccacca tgtcaaggtg gtgctctaac caactgagct acgtgccttc taaagaattt
     3421 ttgcatttta tcgggtcgtt ttaatttttg caagaggtat gtgcatttct ttatgcaaca
     3481 ttgtggcaag atttggggat gtcgtctgaa aaaccgtggg aattcattta taatgccgtc
     3541 ttttaaaaca tatttcgccc cctgtcgccc aactgacatt caatcttatg cttaaattta
     3601 ccttacacaa aaaagacgga tacgcccgac gcggcacgct ggagttgaac cacggcaaaa
     3661 ttgaaacgcc ggtatttatg cctgtcggta cttacggctc ggttaaggcg atgaacccgc
     3721 aaaacctgca cgacatcaag gcgcaaatta ttttgggcaa cacttatcat ttgtggctgc
     3781 gtccgggctt ggaggtcgtc gaacagtttg gagggcttca cggctttatc ggctgggaca
     3841 aaccgattct gaccgactcg ggcggttttc aggttttttc tttgtcggat atgcgcaagc
     3901 tgacggaaga aggctgtacg ttcaaaagcc cgatcaacgg cgacaagctg tttttatcgc
     3961 ctgaaatttc catgaaaatc caaacggttt tgaactcgga catcgcgatg cagctggacg
     4021 aatgcacgcc gggcgaagca acgcgcgaac aggcgaaaaa atcgctgcaa atgagcctgc
     4081 gctgggcgga acggagcaaa aaagcctttg aagatttgaa aaacccgaac gcgctgttcg
     4141 gcatcgtgca aggcgcgatg tatgaggatt tgcgcgaaga atcgctgcgc ggtttggaac
     4201 agtttgattt tcccggcctt gccgtcggcg gcttgtccgt cggcgaaccc aagcccgaaa
     4261 tgtaccgtat gctgcgcgcc gtcggtccga tactgcctga acacaaaccg cattacctga
     4321 tgggcgtagg cacgccggaa gacctcgtgt acggcgtggc gcacggcatc gatatgttcg
     4381 actgcgtgat gcccacccgc aatgcacgca acggctggct gttcacccgt ttcggcgatt
     4441 tgaaaatcaa aaacgccaaa cacaagctcg acaagcgtcc gatagacgaa agctgcacct
     4501 gctacgcctg ccaaaacttc agccgcgcct acctgcacca tctgcaccgc gccggcgaaa
     4561 tcttgggcgc acagctcaac accatccaca acctgcattt ctaccaagtc attatggcgg
     4621 aaatgcgcga agccgtcgaa caaggcaaat ttgccgactg gcaggcgcaa ttccacgaaa
     4681 accgcgcgcg cggcacagac tgattcccgg caatgccgtc tgaagccgct tcagacggca
     4741 ttttgccgct ttaccctacc cgcactattt ttcagaaacc gatcatgctt ccattccttc
     4801 cagaaccctc cctttcctat acgcaacaaa accgtaccgc cgttttgctg ttgaacctcg
     4861 gcacgcccga cgcgccgacc gcgcaggcgg tacgacctta tctgaagtcc tttctgaccg
     4921 accggcgcgt cgtcgaactg cccaaatggc tgtggtatcc cattctgcat ggtctggtac
     4981 tgacgctccg ccccaaaaaa agcgcgcacg cctatgaaaa aatctggttt aaggaaggtt
     5041 cgcccttaga agtttacaca gcacgccaag ctgccgcgct tgccaaacgt atgcccgacc
     5101 tcatcgtccg ccacgccatg acctacggca atccttcggt ggcagacgta ttgtcggaac
     5161 tgaaggcgca aggcgcgggc agactgctgg tcatcccgat gtacccgcaa tatgccgctt
     5221 ccagcagcgg agcggcagta gataaggtgt gcgaacaatt actgctgcaa cggaaccaaa
     5281 tgagcgtccg caccgtttcg cgcttttatg acgataccgg ctacattgat gcgatgaaaa
     5341 accacatcct ccgatattgg gcggaacacg gacgtgggaa aaaactgatg ttgagttttc
     5401 acggcgtacc gcagaagcac cacgacctcg gcgaccccta tcccgacgag tgccgccaca
     5461 ccgccaaact gcttgccgaa gcactggaac tgaccgaaga ccaatatgtc gtatcgttcc
     5521 aaagccaatt cggcagggca aaatgggtta caccgagcac gcaggatttg ttcggcaaac
     5581 tgcccaaaca aggcgtaacc gaactggacg tattctgccc gggctttttg gcagactgtt
     5641 tggaaaccat ggaagaaatc gccctgatgg ggcgtgaaca gttttacgaa gcaggcggca
     5701 aaagctaccg ctacatcccc tgcctcaacg acaaccccga ctggatagac gcactcgtcg
     5761 cacttgccga agaaaacctt ggcggctggc gttgaaactg tttgacccat gtctaaaatg
     5821 ccgtctgaac gccgtgttca gacggcattt tcccgctact ttagcgtatg atggcatcta
     5881 tgctggacag cacatcaagt gcaaccttac caccgattcg gcaaaaaaac ctttcacccg
     5941 ctacgcaaaa tcaacaacaa ggtttcaaac attaaggaaa caccaatgaa cacaacccga
     6001 ctgccgaccg ccctcgtctt gggctgcctc tgcgccgccg cttctgccgc cgacaacagc
     6061 atcatgacaa aagggcaaaa agtgtacgaa tccaactgcg tcgcctgcca cggcaaaaag
     6121 ggcgaaggcc gcggaaccat gtttccgccg ctctaccgct ccgacttcat catgaaaaaa
     6181 ccgcaggtgc tgctgcacag catggtcaaa ggcatcaacg gtacaatcaa agtcaacggc
     6241 aaaacctaca acggattcat gcccgcaacc gccatcagcg atgcggacat tgccgccgtc
     6301 gccacttata tcatgaacgc ctttgacaac ggcggcggaa gcgttaccga aaaagacgta
     6361 aaacaggcaa aaggcaaaaa aaactaaaca gacaaaatgc cgtctgaaac cggcaatccg
     6421 gcttcagacg gcattcaaat caaacctttc taacgcggta ctttcagccc catagacccg
     6481 atattgccgc caccgtcaac ctccttcgcg gtcagcataa agccgccgat gtcaatacgg
     6541 ccgcactcga ccggctcctg actgtcggaa cgcttatcga aaagctcggc aaggctcaaa
     6601 ccctcttcgc ccgcttccag cctcaaaccg taagcaagtg ccaaatcacc cgaacgtgct
     6661 gccggcgaaa cgacaaactc gccgaaaaaa tcaaaatgct cacggacacc gatacccgtc
     6721 tcggtaaagt atttcgccat tttatagtga a
//
LOCUS       DAWKJW010000105         6715 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.105, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000105 DAWKJW010000000
VERSION     DAWKJW010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6715
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.105"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            531..902
                     /locus_tag="WJJ54_001414"
     CDS             531..902
                     /locus_tag="WJJ54_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342273.1"
                     /translation="MKKIRLLLEFHCFPVWFYDENDEIIENDWCEELLPQEILSDNHL
                     KELCIWLADEFDKLYCDEMGNFDYEKLQDEFSFQTKENEQEFIDKLTEFRTKFTQKCF
                     GFCALQDNLPKIENGKIVSWQ"
     gene            complement(1037..1621)
                     /gene="rnhB"
                     /locus_tag="WJJ54_001415"
     CDS             complement(1037..1621)
                     /gene="rnhB"
                     /locus_tag="WJJ54_001415"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEZ7342274.1"
                     /translation="MHILTAGVDEAGRGPLVGSVFAAAVILPETFDLPGLTDSKKLSE
                     KKRDALAEMIKNQAAAWHVAAATPEEIASLNILHATMLAMKRAVDGLAVRPEKIFIDG
                     NRIPEHLNIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRHPQYGFDKHKGYG
                     TKQHLEALEKYGVLPEHRRDFAPVRNLLAQQTLF"
     gene            complement(1690..3585)
                     /gene="mnmG"
                     /locus_tag="WJJ54_001416"
     CDS             complement(1690..3585)
                     /gene="mnmG"
                     /locus_tag="WJJ54_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEZ7342275.1"
                     /translation="MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIET
                     LGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQA
                     DRILYKAAIREMLENQENLDLFQQAVEDVTLDGERISGVITAMGVEFKARAVVLTAGT
                     FLSGKIHIGLEHYEGGRAGDPAAKSLGGRLRELKLPQGRLKTGTPPRIDGRTIDFSQL
                     TEQPGDTPVPVMSVRGSAEMHPHQVSCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVG
                     PRYCPSIEDKINRFADKDSHQIFLEPEGLTTHEYYPNGISTSLPFDIQIALVRSMKGL
                     ENAHILRPGYAIEYDYFDPRNLKASLETKTIEGLFFAGQINGTTGYEEAAAQGLLAGA
                     NAVQYVRGQDPLLLRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMR
                     LTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLKTTWYTPQKLAEDEQIRVFGQKLNR
                     EANLHDLLRRPNLDYAALMTLEGAMPSERLAAEVVEQVEIQVKYQGYIDRQNEEIDSR
                     RDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLK
                     RGFKDAK"
     gene            complement(3910..5337)
                     /locus_tag="WJJ54_001417"
     CDS             complement(3910..5337)
                     /locus_tag="WJJ54_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ7342276.1"
                     /translation="MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQF
                     RLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVF
                     WMWVTALIGMSSAFVESSLAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSL
                     IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVV
                     PLMAVLYLFIALFIILTNIPMIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKR
                     GLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYG
                     DLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITA
                     VFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKL
                     KMGKDPEFKLSEHPGLKRRIKSDVW"
     gene            5497..6486
                     /gene="pdxA"
                     /locus_tag="WJJ54_001418"
     CDS             5497..6486
                     /gene="pdxA"
                     /locus_tag="WJJ54_001418"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEZ7342277.1"
                     /translation="MKQPVFAVTSGEPAGIGPDICLDLAFARLPCRCAVLGDKHLLRA
                     RAEALGKSVVLRDFDPESGGAAYGELEVLHIPAVEAVEAGRLNPANAAYVLQLLDTAL
                     AGISDGIFDGIVTAPLHKGIINDARASTGFFSGHTEYLAEKSGTGQVVMMLAGKDLRV
                     ALVTTHLPLKDVAAAITQPLIESVARILHHDLKHKFGIKNPKILVAGLNPHAGEGGHL
                     GHEETDTIIPALENLRREGINLAGPYPADTLFQPFMLEGADAVLAMYHDQGLPVLKYH
                     SFGQGVNITLGLPFIRTSVDHGTALDLAATGRADSGSLITAVETAVEMARGSL"
BASE COUNT         1487 a         1683 c         1902 g         1643 t
ORIGIN      
        1 tcattcccgc aaaaacaaaa aatcaaaaca gaaaactgaa atatcgtcat tcccgcgcag
       61 gcgggaatct aggtctgtcg gtacggaaac ttatcgggaa aaacggtttt tccaaccctg
      121 agactccgga ttcctgtttt cgcgggaatc cggttttttg agtttcagtc atttttgata
      181 aattcttgca gctttgagtt tctagattcc cgcctgcgcg ggaatgacga aatttcagtt
      241 tttgattttt tgtttttgtg ggaatgacgg tttggaagtt tcccgaaatt caaaaaaaaa
      301 cggaaaccgg acggactgga ttcccgtttt cacgggaatg acggatttta ggtttcttta
      361 tctgaaattc ctaattattt gatgactgcg gttaaaaatg gacaaattgt aggaatgcaa
      421 cgcacaagac ctatatatga attcacctat aacggcacaa aacaccgtgt ggctattgat
      481 ataggcaata atgggtttat tgttggtgcc aaccccaaaa gagtagttaa atgaaaaaaa
      541 taagattgtt acttgaattt cactgttttc cagtatggtt ttatgatgaa aatgatgaaa
      601 ttattgaaaa cgattggtgt gaagaattat taccacagga aattttatca gacaatcatc
      661 tgaaagaatt gtgcatttgg ctagcagatg aatttgataa attatattgt gatgaaatgg
      721 gtaatttcga ttatgaaaag ttacaagatg aattttcgtt tcaaacaaag gaaaatgaac
      781 aagagttcat tgataaatta acagaattca ggacgaaatt cacacaaaaa tgttttggtt
      841 tttgtgcgtt acaagataat ttaccaaaaa ttgaaaacgg taaaattgtt tcttggcagt
      901 gagcgtagcg tacgcaactt gttgcccacg cttttgattt tctgtttttc gcaggaatga
      961 cggtttgggt tctttctctt tgaagttgcg atgctgaaaa tgccgtctga agttcagacg
     1021 gcatttttgt gccggtttaa aacagcgtct gctgcgcgag caggtttctg acgggggcga
     1081 agtcgcggcg gtgttcgggc agcacgccgt atttttcgag ggcttccaaa tgctgcttcg
     1141 tgccgtaacc tttgtgtttg tcgaaaccgt attggggatg gcgttgcgcc agtgcgtaca
     1201 tttccgcatc gcgggcggtc tttgccaaaa cggatgcggc ggatatttcg atgattttgc
     1261 tgtcgccttt gacgacggct tcggcaggga tgttcaaatg ttcgggaatg cggttgccgt
     1321 cgatgaatat tttttcggga cgcacagcca aaccgtcaac ggcgcgtttc atcgcgagca
     1381 tggtggcgtg caggatgttg aggctggcga tttcttcggg cgtggcggcg gcgacgtgcc
     1441 acgcggccgc ctgatttttt atcatttcgg caagcgcgtc gcgttttttc tcgctgagtt
     1501 ttttggagtc ggtcagtccg ggcaggtcga atgtttccgg aaggatgacg gcggcggcaa
     1561 acacgctgcc gactaaaggc ccgcgtcctg cctcgtccac gccggcggtc agtatgtgca
     1621 tgatgtttcc tgttgggatg gtgggaatgc cgtctgaacg atgtttcaga cggcatcgta
     1681 ccgatgtgtt tatttcgcgt ctttaaaccc gcgcttcaaa tgcaccatca gcagtgcgac
     1741 ggcggcaggc gttacgccgg aaatgcggct tgcctgcccg acggtttcag gtttgtgctg
     1801 gttgagcttt tgctgcactt ctgccgataa gcctttgact ttgccgtaat cgatgccgtc
     1861 gggcagtttt aaggtttcga tgtcgcggcg gctgtcgatt tcttcgtttt ggcggtcgat
     1921 atagccttgg tatttgactt ggatttcgac ttgctcgacc acttcggcag cgaggcgttc
     1981 agacggcatc gcgccttcga gcgtcatcag cgcggcgtaa tcgaggttcg ggcggcgcag
     2041 gaggtcgtgc aggttggctt cgcggttgag tttttgtccg aatacgcgga tttgttcgtc
     2101 ttcggcgagt ttttgcggcg tgtaccacgt tgttttcaaa cgttggattt cgcgctcgat
     2161 ggcttcgcgt ttttcgttga acatgcgcca ttgcgcttca cccaccaagc cgattttgta
     2221 gccgtcttcg gtcaggcgca tatcggcgtt gtcttccctg agttgcaatc ggtattcggc
     2281 acggctggtg aacattcggt agggttcgtt cacgcctttg gtgatgaggt cgtccaccaa
     2341 tacgccgaga taggcttgtt cgcggcgcag caggagcgga tcttgtccgc ggacgtattg
     2401 cacggcgttc gcgcctgcga gcaggccttg cgcggcggct tcttcgtagc ctgtcgtgcc
     2461 gttgatttgc ccggcgaaaa acagtccctc aatggttttg gtttcaaggc tggctttgag
     2521 gttgcgcgga tcgaagtagt cgtattcgat ggcgtaaccg gggcgcagga tatgggcgtt
     2581 ttccaaacct ttcatactgc ggacgagcgc gatttgaatg tcgaacggca ggctggtgga
     2641 gataccgttg gggtagtatt cgtgcgtggt cagaccttcg ggttcgagga aaatctggtg
     2701 gctgtctttg tcggcgaagc ggttgatttt gtcttcgata gacggacaat aacgcgggcc
     2761 cacgccttcg attttgccgg taaacatcgg gctgcggtcg aagcctgagc ggatgatgtc
     2821 gtgggtttgc gtgttggtat gcgtaatcca gcaggacact tggtgcgggt gcatttcggc
     2881 actgccgcgc acggacatga cgggaacggg tgtgtcgccg ggctgttcgg tcagttggga
     2941 aaagtcaatc gtgcgtccgt cgatgcgcgg cggcgtgccg gttttcagac ggccttgcgg
     3001 cagcttcaat tcgcgcaaac gtccgcccag cgatttggcg gcggggtcgc cggcgcgtcc
     3061 gccttcgtag tgttccaaac cgatgtggat tttgccggac aaaaacgtgc ctgcggtcaa
     3121 cacgacggcg cgtgctttaa actccacgcc catcgcggta attacgccgc tgatgcgttc
     3181 gccgtcgagc gttacgtctt cgacggcttg ttggaaaagg tcgaggtttt cttggttttc
     3241 caacatttcg cggatggcgg ctttatacaa aatgcggtcg gcctgtgcgc gcgtggctcg
     3301 cactgccgcg cctttgctgg cgttcaggcg gcggaattgg atacctgatt tgtcggttgc
     3361 caacgccatt gcgccaccga gcgcgtcgag ttcgcgtacc aaatgccctt tgccgatgcc
     3421 gccgatggag gggttgcacg acatttgtcc gagcgtttca atattgtgtg tgagcaaaag
     3481 cgtctgcgcg cccatacggg cggcggcgag cgcggcttct gtgccggcgt gtccgccgcc
     3541 gacgacgata acgtcgtagg ttttggggta aatcatgtgg gtcatgtgtg tattgcctga
     3601 cggtgtttca gacggcattt atagtggatt aacaaaaacc agtacagcgt tgcctcgcct
     3661 tagctcaaag agaacgattc tctaaggtgc tgaagtacca agtgaatcgg tttcgtactg
     3721 cttgtactgt ctgcggcttc gtcgccttgt cctgattttt gttaaaccac tatattcaat
     3781 atgccgtctg aaaaacgaaa tggattcaaa agtaaagggt tgggattgta cgcttgttcg
     3841 ccctgttttt acagtgtgcg gaaagggaaa agccgcttcg cggggaagcg gctccggtaa
     3901 gggcgggatt taccaaacgt cggatttgat acggcgtttc aggcccggat gttcggaaag
     3961 tttgaactcg gggtctttgc ccattttcag cttggcggtg taatcgcgca gcagcataaa
     4021 cgccaagggc gagagcagca ggatggcgac aaggttgatc cacgccataa tgcccatcgc
     4081 catatccgcc atatcccaga ccaaaggcac attggcaacc gcgccgaaat agacccacgc
     4141 caaaaccagc atacggaaaa cggcggtaat cagccaatgg cttttgatga attggacgtt
     4201 ggactcggca taggcatagt tgccgataac ggtggaaaag gcaaacataa acaggatgac
     4261 ggcgaggaag cccgcgcccc attgccccac ttggctgaca atcgccgcct gcgtcaacgc
     4321 cgcaccgctc aaatcgccgt aaggctgttg gtaaatcaag atgatgaagg cggtgcaaga
     4381 acaaacgatg atggtatcga caaacacgcc cagcatttga atcatacctt gcgaaacagg
     4441 gtgtttcact tcggcggcgg cggcggcgtt cggcgcggaa cccatacccg cctcgttgga
     4501 atacaggccg cgtttgatgc ccatcatcat cgtttgcgaa atcagaccgc cgagtaagcc
     4561 gcctgctgcc gcgtcgaatt tgaacgcgcc cgaaaaaatc tgaccgaaca cgtccggaat
     4621 catcggaata ttggtcaaaa tgatgaaaag agcgataaag aggtacaaaa ccgccatcag
     4681 ggggacgacg atttccgccg ctttagatat gcgcctgatg ccgccgaaga taatcggcgc
     4741 ggttaaaatc accagggcga cgccgacata atgaggctcc caaccccacg ccgctttgac
     4801 ggtatcggca atggtattgg tctgaaccgc ttcaaacaca aagccgaaac agaaaatcag
     4861 gctcagggcg aacaacacgc ccagccattt ctgccccagc ccttgagtga tgtagtaggc
     4921 agggccgccc cggaaatggt ggttgtcgta gtcgcggact ttaaagagct gcgccagcga
     4981 agattcgaca aacgccgaac tcataccgat taaggcggtt acccacatcc aaaacaccgc
     5041 gcccggtccg ccgactttga tggcgatggc cacgcccgcg atattgccca cgcccacgcg
     5101 gctggcaagg ccggttacaa atgcctgaaa cggcgtgatg ccgtgagggt cgtccccctg
     5161 tttgcggccg ccgagcattt ctttgatgct gcgcccgaac aggcggaatt ggacaaagcc
     5221 cgtggttacg gtgaagaaaa gccccgtacc caaaagcata taaaccaagt atgaccacat
     5281 cggatcgttg atggcgccga cccagccgtg cagccattcg gtaaagttct cgttcatatc
     5341 gcttccttaa agttgaaacc cgcacatatt ggcggtatgc aagcagggtt taaattttgt
     5401 aaacgcccat tctagcagat tgtcaacaaa atcagaaaaa tttacatcgc cgcgcggctg
     5461 cggcgttaga atcgcatttt gtttggagca aacacgatga aacagcctgt ttttgccgtt
     5521 acttccggcg agcctgccgg catcggcccc gatatttgtt tggacttggc gtttgcacgc
     5581 ctgccctgcc gctgcgcggt attgggcgac aaacacctgt tgcgcgcgcg cgccgaagcc
     5641 ttgggcaaaa gcgtcgtctt gcgcgacttc gatccggaat caggcggcgc ggcatacggc
     5701 gagctggaag tgctgcacat ccctgccgtc gaagcggttg aggcagggcg gctcaatccc
     5761 gccaacgccg cctatgtgct gcaacttttg gacaccgcgc tcgcaggcat ttcagacggc
     5821 attttcgacg gcatcgttac cgcgccgctg cacaaaggca tcatcaacga cgcgcgcgca
     5881 agcacaggtt ttttcagcgg acacaccgaa tatctggcgg aaaaaagcgg cacggggcag
     5941 gttgtgatga tgcttgccgg caaagacctg cgcgtcgccc tcgtaacgac ccacctgccg
     6001 ctgaaagacg ttgccgccgc catcacgcaa ccgctgattg aaagcgtcgc acgcattctg
     6061 catcacgact taaaacacaa attcggcatc aaaaatccca aaatcctggt cgccggactc
     6121 aacccccacg ccggcgaggg cggacacctc ggacacgaag aaaccgacac cattatcccc
     6181 gcattggaaa acctgcgccg cgaagggata aacctcgccg gcccgtatcc ggcagatacg
     6241 ctgttccaac cgtttatgct cgaaggcgcg gatgccgtat tggcgatgta ccacgaccaa
     6301 gggctgcccg tgttgaaata ccacagcttc ggacagggcg tgaacatcac gctcggcctg
     6361 ccctttatcc gcacctccgt cgatcacggc accgcgctcg atttggcggc aaccggcagg
     6421 gcggattccg gcagcctgat aactgccgtg gagaccgccg tcgagatggc gcgcggcagc
     6481 ctttaaagat gataaaagac ccgtcatttc cgcgcaggcg ggaatccggt ctgttcggtt
     6541 tcagttgttt ttgggtttcg ggtaatttcc aaatcgtcat tcccgcgcag gcgggaatcc
     6601 agaccttcgg gcgacggcaa tattcaaaga ttatccgaaa gtttgaggtt ctagattccc
     6661 gttttcacgg gaatgacgga atgttgcggg aatccggctt gttcggtttc ggttt
//
LOCUS       DAWKJW010000106         6607 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.106, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000106 DAWKJW010000000
VERSION     DAWKJW010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6607
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.106"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            14..583
                     /locus_tag="WJJ54_001419"
                     /pseudo
     CDS             14..583
                     /locus_tag="WJJ54_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691695.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
     gene            815..1315
                     /locus_tag="WJJ54_001420"
     CDS             815..1315
                     /locus_tag="WJJ54_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003798052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342278.1"
                     /translation="MVFVNPLYYGREAGWFVWLAAAMCGLWLLRALTAKLPQQRYAAL
                     FITLFFAAVLVFGRHDSMYWYPVLVNLMMLAVFGGSLFAGQTVIERLARLQQPDLPEK
                     AVRYTRRVTQVWCVFFIANGTLAALLARLGRYDWWAVYTGVIAYVLMGMPFAGEWLYR
                     KLVLKV"
     gene            1322..1837
                     /locus_tag="WJJ54_001421"
     CDS             1322..1837
                     /locus_tag="WJJ54_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HEZ7342279.1"
                     /translation="MYTCTSCGEKHEDMPAIGFTAPDPYNQLSEEERIAYQAECDSDF
                     CIIRYPDQTDRFIRAVLPIPIIGHEETLEYGVWVSVSEKSFNDYQSRFYDNPENAVYF
                     GMICNRLPPYESDTFGLHCNVVTQSDNQRPLLQLHQSGGHPLVRDFYHGIEYAEAQAR
                     IGAVSESDCSG"
     gene            1856..3334
                     /gene="ubiD"
                     /locus_tag="WJJ54_001422"
     CDS             1856..3334
                     /gene="ubiD"
                     /locus_tag="WJJ54_001422"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HEZ7342280.1"
                     /translation="MKYKDLRDFIAMLEQQGKLKRIAHPVSPHLEMTEIADRVLRAEG
                     PALLFEHPIKPDGTRYDYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEP
                     PKGIKDAFSKLPLLKDIWSMAPNVVKNAPCQEIVWEGENVDLYKLPIQHCWPEDVAPL
                     VTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTPYP
                     VAVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLE
                     GVIHPNETALEGPYGDHTGYYNEQDYFPVFTVERITMRENPIYHSTYTGKPPDEPAVL
                     GVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLR
                     QFMYTKFIIVVDDDVDVRDWKEVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLG
                     GKMGLDATNKWPGETDREWGSVIKKDPAVTAKIDGIWEELGL"
     gene            complement(3398..5512)
                     /locus_tag="WJJ54_001423"
     CDS             complement(3398..5512)
                     /locus_tag="WJJ54_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEZ7342281.1"
                     /translation="MDLLSVFHKYRLKYAVAVLTILLLAAVGLHASVYRTFTPENIRS
                     RLQQSIAHTHRKISFDADIQRRLLPRPTVILKNLTITEPGGDQTAVSVQETKIGLSWK
                     NLWSDQIQIEKWVVSSAELALTRDGKGVWNIQDLIDSQKRQASVNRIIVENSTVRLNF
                     LQEQLILKEINLNLQSPDSSGQPFESSGILVWGKLSVPWKSRGLFLSDGIGTPEISPF
                     HFEASTSLDGHGITISTTGSPSVRFNAGGADAAGLGLRADTSFRNLHLTAQIPTLALR
                     NNSIKIETVNGAFTAGGEYARWDGSFKLDKANLHSGIANIGNAEISGSFKTPRHQTNF
                     SLNSPLVWTENKGLEAPRLYVSTLQDTVNRLPQPRFISRLDGSLSVPNLQNWNAELNG
                     TFDRQTVAAKFRYTHEDTPHLEAAVALQKLNLTPYLDDVRQQNGKIFPDTLAKLSGDI
                     EAHLKIGKVQLPGLQLDDMETYLHADKGHIALSRFKSGLYGGHTEGGISIANTRPATY
                     RLQQNASNIQIQPLLQDLFGFHSFSGNGDAVIDLTAGGETRKELIRSLQGSLSLNISN
                     GAWHGIDMDNILKNGISGKTADNAAPSTPFHRFTLNSEISDGISRHIDTELFSDSLYV
                     TSNGYTNLDTQELSEDVLIRNAVHPKNKPIPLKITGTVDKPSITVDYGRLTGGINSRK
                     EKQKILEDTLLEQWQWLKPKEP"
     gene            5603..6496
                     /locus_tag="WJJ54_001424"
     CDS             5603..6496
                     /locus_tag="WJJ54_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEZ7342282.1"
                     /translation="MIIVMSRRAAEADIAGVVAFIRSRGLREHISHGDERTVIGAIGD
                     DRVLSVREVQTLPEVEKAVRILDTWKTVSWENRAEDSRVAAKGVAFGGGETVCIAAEP
                     SVWRNADAVFLDPFFTSANLYDTSSADEGRGRCRRLAEQTASAHGAGKPVLVRVRNVR
                     HVEAALNAGADILYLGGGLMSDLAVLNEAGSLNIPLVLCKDKHHSAEDWLNAAEYVVS
                     RGNRHLILGESGVLNHTKGHPYRLDVESIVKVRQISHLPVIANITGLWNRDMPQEILY
                     GLAKAAGACGIVGTCFEKSGG"
BASE COUNT         1407 a         1624 c         2013 g         1563 t
ORIGIN      
        1 aatttaatcc actatagttt atgcctcgca cgacggggaa atggcgcgca gtttcgattt
       61 gtggttggaa ctgttgaaat cgcaaatcgt gtcgccgact tcgttcggtt tgtcggtgca
      121 caatgcaacg gcggggtaat ggtcgatatt gaggcgggat atgagcgagc agacggcatt
      181 ggccgtgtgt gccgacggtg tggaaacggc attggcggaa gcggcatcac tgttggaaga
      241 gggatgcggg tcggttttgg ttttggcggc ggacgatccg ctgccggaag gatatgccgt
      301 atcggcaacg cgcgcgccgt ttgcttatgc tttggcgatg gttctgacca aagggacgcg
      361 ttacagcctg actttatctg cttcggacga tatgccgtct gaagccggta tgctgcccga
      421 ggcatattgg agcggtttgg aatgggtgcg ctttctgctg aacggcagtc gggaatgccg
      481 ccgggtatat cgcaatcgtg aatggctgtg gcagcccgca agctgcaggc tgaagatttc
      541 cgcaatgtcc gcaccgtcaa cgacgtggta caggcggtat tgaagattca ggcgggctaa
      601 tcgggtattt ctaattattt ttcagacggc atgtttttat cggatgccgt ctgaaaacat
      661 ttgtgcggat tcaaaatgaa acccggtttt ttcggacata tttttctgac cgtattaagc
      721 attgcctatc ccgctttgtg gtatagtgga ttaacaaaaa tcaggacaag gcgacgaagc
      781 cgcagacagt acggcaaggc gaggcaacgc tgtactggtt tttgttaatc cactatatta
      841 cggcagggag gcgggctggt ttgtctggct ggcggcggcg atgtgcgggt tgtggctgct
      901 gcgcgccctg actgccaaac tgccccaaca gcgttatgcg gctttgttta ttacactgtt
      961 ttttgccgca gtattggtgt tcgggcggca tgattcgatg tattggtatc ccgtcctcgt
     1021 caatctgatg atgttggcgg tgttcggcgg cagcctgttt gccggacaga cggtcataga
     1081 aaggctcgcg cggctgcaac agcccgacct gcctgaaaaa gccgtgcgct atacccgccg
     1141 ggtaacgcag gtttggtgcg tattctttat tgccaacggg acgcttgccg ctttgttggc
     1201 acggttgggg cgatatgatt ggtgggcggt ttataccggc gtgattgcct atgtattgat
     1261 ggggatgccg tttgccggcg aatggcttta ccgcaaactc gttttgaaag tctgaaacct
     1321 tatgtacact tgcacttcct gcggcgaaaa acatgaagat atgcccgcaa tcggctttac
     1381 cgcccccgat ccctataatc aactcagtga agaagaacgc attgcttatc aagcagaatg
     1441 cgattctgat ttctgcatca tccgctatcc cgaccaaacc gaccgcttta tccgcgcggt
     1501 gctgccgatt ccgattatcg ggcatgagga aacgctggaa tatggcgtgt gggtatccgt
     1561 cagcgaaaag agttttaacg actatcaaag ccgcttttac gacaatccgg aaaacgccgt
     1621 ttatttcggt atgatctgca accggctgcc cccttacgaa tccgacacct tcggtttgca
     1681 ttgcaatgtc gttacccagt ccgacaacca acgccctttg ctgcaactgc atcaaagcgg
     1741 cggacatccg ctggtacgcg acttttatca cggcatagaa tatgccgaag cgcaggcaag
     1801 gataggagcg gtatccgaat cggattgttc aggataaaag gacaaaaaga taaacatgaa
     1861 atacaaagac ctacgcgact tcatcgccat gctcgagcag cagggcaaac tcaagcgcat
     1921 cgcgcatccc gtttccccgc atttggaaat gaccgaaatc gccgaccgcg tgctgcgtgc
     1981 cgaagggccg gcgttgctgt ttgaacaccc gattaagccc gacggcacgc gctacgatta
     2041 tcccgtgttg gcaaacctgt tcggcacgcc cgaacgcgtg gcgatgggta tgggggcgga
     2101 cagcgtgtcc aagctgcgcg aaatcgggca gacgctggcg tatttgaaag aacccgaacc
     2161 gcccaaaggc atcaaagatg cgttttccaa actgccgcta ctgaaagaca tttggagcat
     2221 ggcgccgaac gtggtgaaaa acgcgccgtg tcaggaaatc gtgtgggaag gcgaaaacgt
     2281 tgatttgtat aaacttccga ttcagcattg ctggccggaa gacgttgcgc cgctggtaac
     2341 atggggcttg accgtaacgc gcgggccgca caaaaaacgc caaaatctcg gcatttaccg
     2401 ccaacaactc atcggcaaaa acaagctgat tatgcgctgg ctgtcgcatc gcggcggcgc
     2461 gttggattat caggagttcc gcaaactcaa tcccgatacg ccgtatcccg tcgccgtcgt
     2521 gctcggctgc gaccctgcca ccattttggg cgcggtaacg cccgttcccg ataccttgag
     2581 cgaataccag tttgccggac tgctgcgcgg ttcgcggacg gagctggtga aatgtatcgg
     2641 caacgatttg caagtgcctg cacgcgcaga aatcgtgctg gaaggtgtga ttcatccgaa
     2701 cgaaaccgcg ttggaaggcc cgtacggcga ccacacgggc tattacaacg agcaggatta
     2761 tttccctgtg tttacggtcg aacgcatcac catgcgcgaa aacccgattt accattcgac
     2821 ctacacaggc aaaccgcccg atgagcctgc cgttttgggc gtggcgttga acgaagtgtt
     2881 cgtaccgctc ttgcaaaagc agtttcccga aatcaccgat ttctacctgc cgcccgaagg
     2941 ctgctcctac cgcatggcgg tggtgagcat gaaaaaacag tacgccggac acgccaaacg
     3001 cgtgatgatg ggctgctggt cgttcctgcg ccagtttatg tacaccaaat tcatcatcgt
     3061 ggtggatgac gatgtggacg tgcgcgactg gaaagaagtc atctgggcgg tcaccacgcg
     3121 catggaccct gtgcgcgaca ctgttttggt agaaaacacg cccatcgatt atctcgactt
     3181 cgccagcccc gtcagcggac tcggcggcaa aatgggtttg gacgcgacca acaaatggcc
     3241 gggcgaaacc gaccgcgaat gggggagcgt catcaaaaaa gaccctgcgg ttacggctaa
     3301 gattgatggg atttgggagg aattggggtt gtaggtttta cggtctgccg tctgaagcgt
     3361 gggggcgttt cagacggcat ttgtgtacgc aggatgttta cggttcttta ggtttgagcc
     3421 actgccattg ttccagcagg gtgtcttcga ggattttctg tttctctttg cgcgaattga
     3481 tgccgccggt cagcctgccg taatcgacgg taatggacgg tttgtccacc gtaccggtga
     3541 ttttcagggg aatcggtttg tttttcggat ggacggcgtt gcggataagg acatcttcag
     3601 acaattcctg cgtatccaga ttggtatagc cgttgctggt aacatagagg ctgtcggaga
     3661 agagttcggt atcgatgtgg cggctgatgc cgtctgaaat ttcgctgttg agcgtgaatc
     3721 ggtggaaggg tgtgctgggt gcggcattgt cggcagtttt gcccgaaatg ccgtttttca
     3781 ggatattgtc catgtcgata ccgtgccatg caccgttgga aatatttagc gacaggctgc
     3841 cctgaagcga gcggataagc tcttttcggg tttcgccgcc cgcggtcagg tcgatgaccg
     3901 cgtcgccgtt gccgctgaag ctgtggaagc cgaacaggtc ttgcagcagc ggttggattt
     3961 ggatgttgct tgcattctgt tgcaggcggt aagtggcggg acgggtgttg gcgatgctga
     4021 tgccgccttc ggtatggccg ccgtaaagcc ctgacttgaa acggctgagc gcgatatggc
     4081 ctttgtcggc gtggaggtag gtttccatat cgtccagttg caggccggga agttggactt
     4141 ttccgatttt caggtgcgcc tcgatgtcgc cggacagctt ggcgagggtg tcgggaaata
     4201 ttttgccgtt ttgttgccgc acgtcgtcaa gatagggggt caggttcaat ttttgcagtg
     4261 cgacggcggc ttccagatgc ggtgtgtctt catgtgtgta tctgaatttc gcggcaacgg
     4321 tttggcggtc gaatgtgccg tttaattcgg cattccaatt ttgcagattc ggtacggaca
     4381 gcgaaccgtc gagccggctg atgaaacggg gttgcggcag gcggttgacg gtatcctgaa
     4441 gggtcgatac atacaggcgc ggcgcctcca gccctttgtt ttccgtccat acgagcggcg
     4501 aattgaggga gaagttggtc tggtggcgcg gtgttttgaa gctgccggag atttcggcgt
     4561 tgccgatgtt ggcgatgccg gagtgcaggt tggctttgtc gagtttgaac gaaccgtccc
     4621 atcgggcata ttcgccgccg gcggtaaatg cgccgttgac ggtttcaatt ttaatgctgt
     4681 tgttcctgag tgccagcgta gggatttggg cggtcaggtg gaggttgcgg aaggaagtgt
     4741 ctgcacgcag gccgaggccg gcggcatccg ctccgccggc gttgaagcgg acagaagggc
     4801 tgccggtggt ggaaatggtg atgccgtgtc cgtccagcga agtggaagct tcaaaatgga
     4861 acggtgagat ttcgggcgtg ccgatgccgt ctgaaaggaa cagccccctg cttttccacg
     4921 ggacggacag ctttccccaa accagtatgc ccgaactttc aaacggctgc cccgacgaat
     4981 cgggggattg caggttgagg ttgatttcct tcaggataag ctgttcctgc aggaaattga
     5041 ggcggacggt gctgttttcg acgataatgc ggttgactga ggcttggcgt ttttggctgt
     5101 cgatcaggtc ttggatgttc caaacacctt tcccgtcgcg cgtcagggca agttccgcac
     5161 tcgaaaccac ccatttttca atctgtatct gatccgacca caggtttttc cagctcaatc
     5221 cgattttggt ttcttggacg gaaacggcag tctggtcgcc gccgggttcg gtaatggtca
     5281 ggtttttcag gatgacggtc ggccggggca ggagcctgcg ctgaatgtcc gcatcaaacg
     5341 agattttccg gtgtgtgtgt gcaatgcttt gttggaggcg gctgcggatg ttttcaggcg
     5401 tgaaggtgcg atatacggaa gcgtgcagcc cgactgccgc caaaagcagt atcgtcagca
     5461 cggccaccgc atatttcaga cggtatttgt ggaaaaccga taataaatcc atagcccgaa
     5521 caatctgtaa aacacgccac agtataacac ggcttgcaaa aatcctattt tgggcaggcc
     5581 gtttcttgtg tcaggaggaa atatgattat tgtcatgagc aggcgtgccg ccgaagcgga
     5641 cattgccggc gttgtcgcct ttatccgcag cagaggtctg cgagaacaca tttctcacgg
     5701 cgacgagcgt accgtcatcg gcgcaatcgg cgacgatagg gttttgagcg tcagggaggt
     5761 gcagacgctg ccggaggtcg agaaagccgt ccgcattttg gatacatgga aaaccgtcag
     5821 ttgggaaaat cgggcggaag acagccgcgt tgccgccaaa ggcgtggctt tcggcggcgg
     5881 ggaaaccgtc tgtatcgccg cagaaccgtc agtatggcgc aatgcggatg cagtgtttct
     5941 agatccgttt ttcacttcgg caaacttata cgacacttca agtgcggatg aagggcgagg
     6001 acggtgcaga cggttggcgg aacagaccgc atcggcgcat ggcgcaggga aacccgtatt
     6061 ggtgcgcgtc cgcaacgtcc gccatgtcga agcggctttg aatgcggggg cggacatcct
     6121 gtatttgggc ggcgggctga tgtccgatct tgccgtattg aatgaagccg gaagcctgaa
     6181 cattcccttg gtgctgtgta aagacaagca ccattctgcc gaagattggt tgaatgccgc
     6241 agaatatgtc gtctcgcgcg gcaaccgcca cctgattctg ggcgagtcgg gcgtattgaa
     6301 ccataccaaa ggccatccct accgtttgga tgtcgaatcc atcgtgaaag tccgccaaat
     6361 cagccatctg cccgtgattg cgaatattac gggattatgg aaccgcgata tgccgcagga
     6421 aatcctgtac ggcttggcaa aggcggcagg cgcgtgcgga atcgtcggaa cctgttttga
     6481 aaagtcgggc ggatagcagg cataccggca gattcaaagg cggagcagac attcggacaa
     6541 catgccgtct gccgcccgaa tagcggtgcc gtctgaagcg cacaagacgg tttcagacgg
     6601 catataa
//
LOCUS       DAWKJW010000107         6504 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.107, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000107 DAWKJW010000000
VERSION     DAWKJW010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6504
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.107"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..866)
                     /gene="mafB"
                     /locus_tag="WJJ54_001425"
     CDS             complement(<1..866)
                     /gene="mafB"
                     /locus_tag="WJJ54_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HEZ7342283.1"
                     /translation="MNLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEP
                     GGKYHLFGNARGSVKNRVYAVQTFDATAVGPILPITHERTGFEGVIGYETHFSGHGHE
                     VHSPFDNHDSRSTSDFSGGVDGGFTVYQLHRTGSEIHPEDGYDGPQGSDYPPPGGARD
                     IYSYYVKGTSTKTKSNIVPRAPFSDRWLKENAGAASGFFSRADEAGKLIWESDPNKNW
                     WANRMDDIRGIVQGAVNPFLMGFQGVGIGAITDSAVSPVTDTAAQQTLQGINHLGNLS
                     PEAQLAAATALQ"
     gene            complement(906..1868)
                     /gene="mafA"
                     /locus_tag="WJJ54_001426"
     CDS             complement(906..1868)
                     /gene="mafA"
                     /locus_tag="WJJ54_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HEZ7342284.1"
                     /translation="MQTRLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAAS
                     ARAAVKDMDLQALHGRKVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDY
                     TYPRYETTAETTSGGLTGLTTSLSTLNAPARSRTQSDGSGSKSSLGLNIGGMGDYRNE
                     TLTTNPRDTAFLSHLVQTVFFLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNA
                     ETLKAQTKLEYFAVDRTNKKLLIKPKTNAFEAVYKENYALWMGPYKVSKGIKPTEGLM
                     VDFSDIRPYGNHTGNSAPSVEADNSHEGYGYSDEAVRQHRQGQP"
     gene            complement(2052..2771)
                     /locus_tag="WJJ54_001427"
     CDS             complement(2052..2771)
                     /locus_tag="WJJ54_001427"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEZ7342285.1"
                     /translation="MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVK
                     MGVQVGIVVGGGNIFRGVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARV
                     QSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVML
                     KATNVDGVYTADPKKDPSATRYETITFDEALLKNLKVMDATAFALCRERKLNIVVFGI
                     AKEGSLKRVVTGENEGTLVHC"
     gene            complement(2991..3845)
                     /locus_tag="WJJ54_001428"
     CDS             complement(2991..3845)
                     /locus_tag="WJJ54_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HEZ7342286.1"
                     /translation="MAEITAKMVADLRAATGLGMMECKKALVEAEGNFDKAEEILRIK
                     SGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAE
                     KKPASVEELSELVEAERKAIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVE
                     YKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTEQAIASGKPADIAAKMV
                     EGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENGTEVISFVRYKVGDGIEKAVVDYAA
                     EVAAAAKV"
     gene            complement(3974..4702)
                     /gene="rpsB"
                     /locus_tag="WJJ54_001429"
     CDS             complement(3974..4702)
                     /gene="rpsB"
                     /locus_tag="WJJ54_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEZ7342287.1"
                     /translation="MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLE
                     KTLPMFQDAQEAVRRLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLT
                     NYKTVKQSIKRLEEKTAALENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDA
                     IFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIA
                     DAVLEGKNQALQETVAAAQEAAAE"
     gene            complement(4875..5108)
                     /locus_tag="WJJ54_001430"
     CDS             complement(4875..5108)
                     /locus_tag="WJJ54_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342288.1"
                     /translation="MWHIVAIGYLFVAVMYSAAQPSIARALIYLVFWAVLPTVFTVFT
                     ITVRRRNHLMRQQEQAESEQQRAQRQKDSGTKP"
     gene            5186..5767
                     /locus_tag="WJJ54_001431"
     CDS             5186..5767
                     /locus_tag="WJJ54_001431"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEZ7342289.1"
                     /translation="MRNEEKRALRRELRGRRSQMGRDVRAAATVKINHLLKRYIKKGR
                     KIGVYWPMGKELRLDGFVRAAQKRGAELYLPYIEPRSRRMWFTPYPESGMERERIRGR
                     ARLNVPQFAGRKIRVHGLSVLLVPLVGIDREGYRLGQAGGYYDATLAAMKYRLQAKTV
                     GVGFACQLVDRLSVEAHDLPLDGFVSEAGILCF"
     gene            5828..6418
                     /locus_tag="WJJ54_001432"
     CDS             5828..6418
                     /locus_tag="WJJ54_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ7342290.1"
                     /translation="MSEKIILPVLSLGGVRLEPLDVHHETGLREAVCDGEVWKLGVTS
                     APHPDRVADYIGTALATRLAFAVVDEEAGRVVGTTAYYHFEPQIPRLDIGFTWYAASA
                     RRTRINTCCKIMLLDYAFDVLACRCVGWRTDILNLASQRAIERLGAEKDGVLRMHMLR
                     KDGSVRDTVVYSMLREDWCKNREILTGRLAGYGVQV"
BASE COUNT         1477 a         1498 c         1746 g         1783 t
ORIGIN      
        1 tcttgtaatg cggttgcagc cgcaagttgt gcttcgggac ttaaatttcc taaatgatta
       61 ataccttgta gagtctgctg cgcggctgta tctgtgaccg ggcttactgc actgtctgta
      121 attgccccaa tccctactcc ttgaaaaccc attaaaaaag gattaaccgc accttggacg
      181 atgccgcgaa tatcatccat acggttagcc caccaatttt tattggggtc gctttcccat
      241 atcagttttc ctgcttcatc agcacggctg aaaaaaccag aggcggcacc ggcattttct
      301 tttagccaac ggtctgaaaa tggggctcgg ggaacaatat tactctttgt ttttgttgaa
      361 gttcctttga cataatagct gtatatatcc cttgctcctc cggggggcgg ataatcgctg
      421 ccttgcggtc cgtcatatcc atcctccgga tggatttccg accctgtccg atgaagttgg
      481 taaacagtaa aaccaccgtc tacaccgccg ctgaaatcag aagtgcttct tgaatcatga
      541 ttatcgaacg gactgtgcac ttcatgtcca tgtcctgaaa aatgggtttc atagccgata
      601 acaccttcaa atcctgtccg ttcgtgtgta ataggcagta tggggccgac cgcagttgca
      661 tcaaatgttt ggacggcgta aacccgattt ttaacactgc cgcgagcatt accaaacaga
      721 tggtatttac cacccggttc gtagtgtttt gcctgcatat catcgcgcaa acgggcatcc
      781 aaaccgttcg catgactaat ggggatttgc agcaacgata ttgctgctgc aaacagcatc
      841 atgaattttt gaataggcaa attcattttg ttttccttgg tagcaagcgg ttatggtagt
      901 gtgaatcaag gttgcccttg tctatgttgt cgcactgctt catcgctgta tccatacccc
      961 tcatgactgt tatcagcctc tacggatggg gcggagttac ccgtatgatt gccgtatggt
     1021 cggatatcgg agaaatcgac cattaatcct tccgtcggtt taattccttt gcttacttta
     1081 tacggcccca tccacaatgc gtaattttct ttatagacag cttcaaacgc attggttttg
     1141 ggtttgatga gcaatttttt attggttctg tctactgcga aatattccag ttttgtttgg
     1201 gctttcagtg tttcggcatt gtataggtgc atttcggttc tgttgcgtat cgttccgaat
     1261 acgtcgatgt taataaacac atctgtatcg gcattggcag gagaaacaac gtctatgccg
     1321 cgcaggaaaa atacggtctg taccaagtgg gaaagaaagg cagtgtcgcg cgggttagtc
     1381 gtcaaggttt catttcgata atcccccatc ccgccaatat ttaagcccag actgctttta
     1441 cttccgctac cgtctgattg ggtgcgagag cgtgcagggg cattaagtgt agataaagaa
     1501 gtggttaaac ctgtcaaacc gcctgatgtt gtttcagcgg tggtttcgta acgtggatag
     1561 gtgtaatcgg tacggacggc agggctgttt atgtattcgc cacgaatcag tgcatcaatg
     1621 gagtagcgac cccctgtcaa actgcctgaa ccttggtcgc ccatagttgc aatgtacaat
     1681 gcaacttttc gtccgtgtaa tgcctgtaaa tccatgtctt taacggcagc tctggcagaa
     1741 gcggccacaa gttcttgttc gaccgcaaag cgtttacctc cgccatgcga tggaatacct
     1801 gtcagtgtcc cgcaggcgga taaaataaaa actgaaaaaa gaataggtat cagcagccgt
     1861 gtttgcatag attttctcct ttgatgaaaa acaaattgta tcaaaattgt aaatatagtg
     1921 gattaaattt aaaccagtac ggcaaggcga ggcaacgccg tactggttta aatttaatcc
     1981 actataatct ccatataata aatggctgtc tgaagcccat atgcgactat atctgccgac
     2041 actatggtca atcagcagtg aaccagcgta ccttcgtttt caccggttac tacacgtttg
     2101 agcgagcctt ctttagcaat gccgaatact acaatattga gcttgcgttc gcggcagagg
     2161 gcgaaagcgg tggcatccat cactttgagg tttttcaaca aggcttcgtc aaaagtaatg
     2221 gtttcgtagc gtgtggcgga cgggtctttt ttcgggtctg cggtgtatac accgtcgacg
     2281 ttggtggctt tgagcatcac gtcgcagttc atttccgcac cgcgcaatgc ggcggcagtg
     2341 tcggtcgtga agaacgggtt accggtaccg gcggcaaaaa tcacgacttt gccttcttcc
     2401 aaatattgga tggctttagg acgggcgtaa gtttcagcga tttgctgcat agacagtgcg
     2461 gattgtacgc gcgctttgat gcctaaagtt tcaaatgcgt ctttgagtgc caacgcgttc
     2521 atcacggtcg ccatcatacc catgtaatcg gcagtggcgc ggtccatgct gcctgcttgg
     2581 gcggatacgc cccggaaaat attgccgccg cccacgacga tgccgacctg tacgcccatt
     2641 ttaacgactt cggcaatttc gccgacggtt tggacgatgg tgtcgtgatt gatgccgaac
     2701 ggatcggaac ccatcaggga ttcgccggag agtttcagta atacgcgttt gtatttgatt
     2761 tgctgtgtca tgggatacct tgctttcttg aatgtcgtcg gtcggagttt gggccgtctg
     2821 aattttcaaa cggtcggaat tacaatgata tggtgtgtcg ttctattatt gttttgtttt
     2881 cagacggtct gaatattcgg tcgtcttaaa ataggtaccg caaacggttt tctcaaaaaa
     2941 aagcaccctg attcgtttgg aatccaggtg ctttcttttt cataagtgcc ttacactttg
     3001 gcggctgcgg ctacttcggc tgcgtagtcg acaacggctt tttcgatgcc atcgcctact
     3061 ttgtagcgta cgaagctgat cacttcagtg ccgttttctt tagcgaattg ggcaacagtt
     3121 tgatcggggt tcatcacgaa tgcttggccg ttcagagtga tttcagccaa gaatttacgg
     3181 atgcggcctt caaccatttt agcggcgatg tcggcaggtt tgccagaagc gatggcttgt
     3241 tcggtgtaga tgtggcgttc tttttcaacg gtttcggcat ctacttcggc ttcgcttacg
     3301 cattgtggtt tagcggcaac aatgtgcata ccgattttgc gtgctacgtc ttcagagcct
     3361 ttgtactcaa ccaatacgcc ttcggtcgcc aatgcgccgt ggatgtaggc aaccagttgg
     3421 ttggcagtgt cgatcacttg gaagcgacgg acagacatgt tctcgcccaa tttggcgatg
     3481 atggctttgc gttctgcttc aaccagttcg ctcagttctt caacagaagc cggttttttc
     3541 tcggcggcgg ttttcgcaac gaagttggca aattctacga agcccgcgtc tttagcaacg
     3601 aagtcggttt cgcagtttac ttcaaccaat gcgccgacat tgccgttaat cgcgtaagcc
     3661 aatacgcctt cggcagcagt acggccagcc agtttaccgg ctttcgcacc ggatttaata
     3721 cgcaggattt cttcggcttt gtcgaagttg ccttcagctt caaccaaggc ttttttgcat
     3781 tccatcatgc ccaggccggt agcggcgcgc agatcggcaa ccatttttgc agtaatttct
     3841 gccattttga atctcctaga tttttgggaa atacggaaag gattttccgc attcgggaat
     3901 cgtgtgccgc gaacggacgt tcagacggca tatttgagaa aaggggcata acgcccctct
     3961 tcggtttgcc ggattactcg gcagcggctt cttgggcagc ggctacggtt tcttgcagcg
     4021 cttggttttt gccttccaaa actgcgtcag cgatgccgcg gcagtacagg cggatggctt
     4081 tggcggagtc gtcgttgccg gggataacgt atttcacgcc gtcggggctg ttgttggtat
     4141 cgactacggc gataacaggg atgcccaatt tttcagcttc aaccagagta cctttttggt
     4201 agccggtatc gataacgaaa atcgcgtcag gcaggccttt catgtttttg ataccgccca
     4261 aagaacgttc cagtttttca acatcgcgtt gcatttccag aatttctttt ttgctgaaac
     4321 cgctttcggc agcattttcc aaggctgcgg ttttttcttc caggcgtttg atggattgct
     4381 taacggtttt gtagttggtc agcataccgc ccaaccagcg gtaatcaacg aaaggcatac
     4441 cggcacgggt cgcttcttcg cggatgatgt cgcgggcttg gcgtttggta cctacgaaca
     4501 atactgtacc tttgttggca accaaacggc gtacggcttc ttgcgcgtct tggaacatcg
     4561 gcagggtttt ttccaagttt acgatatgga ttttgttgcg cgcaccgaaa atgtattgtg
     4621 ccattttcgg gttccagaaa cgggtttggt ggccgaagtg aacaccggct tcaatcatct
     4681 gacgcatagt aatttgagac attttatttc cttgaaaggg ttaagagcac acattcaatc
     4741 gcatagaact tgataggtca cgcctattgt caagcaccct tcggcgaaag tgggcataag
     4801 ttttaaaaaa tagtgtgttt ccgaaatgga aaactgacgg attatagcgg ataagatgcc
     4861 gtctgaaaag ggattcaggg ttttgtgccg ctgtcttttt gccgttgtgc gcgctgctgt
     4921 tcggattccg cctgttcctg ctgcctcatc aggtggttgc ggcggcggac ggtaatggtg
     4981 aaaaccgtga acacggtggg cagcaccgcc caaaaaacca aataaatcaa ggcgcgcgca
     5041 atactcggct gcgcggcgga atacataacg gcaacaaaaa gatagccgat ggcgacgatg
     5101 tgccacattg tgtgcgtcct gtttgaatgt taacaaaatc gttataatcg caacattcta
     5161 ccgcaatcct gaaaggccgt ctgaaatgag gaatgaggaa aaacgcgccc tgcgccgcga
     5221 attgcgcggg cggcgttcgc aaatggggcg ggacgtgcgg gcggcggcaa cggtaaaaat
     5281 caaccacctg ctcaaacgtt atattaaaaa agggcggaaa atcggcgtgt attggccgat
     5341 gggcaaggaa ttgcgtttgg acggctttgt ccgcgcggcg caaaaacgcg gtgcggaact
     5401 ctacctgcct tatatcgaac cgcgttcgcg gcggatgtgg tttacgccgt atcctgaaag
     5461 cggaatggaa cgggagcgca tacggggcag ggcgaggttg aacgtgccgc agtttgcagg
     5521 gcgcaaaatc cgcgtgcacg gtttgtcggt attgctcgtt ccgcttgtcg gcatagaccg
     5581 cgaaggctac cgtttggggc aggcaggcgg ctattacgat gcgacgcttg cagcgatgaa
     5641 ataccgtttg caggcaaaaa ccgtgggcgt gggctttgcc tgccagttgg tggacagact
     5701 gtcggtcgag gcgcacgacc tgccgctgga cggttttgtg tcggaggcgg ggatattgtg
     5761 tttttagccg ttcagacggc attttgaacg gaaatgccgt ctgaaggtgg aatattggga
     5821 gaaaaggatg tcggaaaaga taatactgcc ggtcttgtcg ttgggtggcg tacggctcga
     5881 accgttggat gtgcatcatg aaacgggttt gcgcgaggcg gtttgcgatg gggaagtttg
     5941 gaagctggga gtaacgtccg cgccccatcc ggatagggtg gcagactata tcgggacagc
     6001 attggcaacg cgtttggcgt ttgcggttgt cgatgaagag gcgggcaggg tggtcgggac
     6061 aacggcgtat tatcattttg aaccgcagat tccgcgtttg gatattggat tcacatggta
     6121 tgcggcatcg gcacggcgga cacggataaa cacctgttgc aaaatcatgc tgttggatta
     6181 cgcatttgat gttttggctt gccgttgcgt gggatggcgc acggatattc tgaaccttgc
     6241 ctcgcaacgt gccatcgaac ggctgggtgc ggaaaaagac ggcgtgctgc gtatgcatat
     6301 gctccgtaaa gacggcagtg tgcgcgatac ggtcgtgtac agtatgctga gggaagattg
     6361 gtgcaaaaac agggaaatcc tgaccggcag gttggcaggg tatggcgtgc aggtgtgagg
     6421 cagtattttc aaatttatag tggattaaca aaaaccagta cagcgttgcc tcgccttagc
     6481 tcaaagagaa cgattctcta aggt
//
LOCUS       DAWKJW010000108         6475 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.108, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000108 DAWKJW010000000
VERSION     DAWKJW010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6475)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6475)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6475
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.108"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            16..336
                     /locus_tag="WJJ54_001433"
     CDS             16..336
                     /locus_tag="WJJ54_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ7342291.1"
                     /translation="MGEKIKDGKKTVLSREEEQKICNTFTHKQAVEDFSVVIGYDEIK
                     AKNHSLSAGQYFEVKIDYVDISADEFAQKMAGFSADLDKLFAESAELEKEIKDRLAML
                     KFNS"
     gene            347..484
                     /locus_tag="WJJ54_001434"
     CDS             347..484
                     /locus_tag="WJJ54_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HEZ7342292.1"
                     /translation="MKPVKLKMPSESLSDGILFGLENTYAVLSLKERIQKTKATGIYR
                     K"
     gene            complement(644..1981)
                     /gene="ribB"
                     /locus_tag="WJJ54_001435"
     CDS             complement(644..1981)
                     /gene="ribB"
                     /locus_tag="WJJ54_001435"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEZ7342293.1"
                     /translation="MTDTAGLRRRNLRQWIAEHYGGLQTRFAEAVALNTGELSALLKN
                     KSFGEKKARKIEQAAKMPAFWLDTEHTARPSEHTGKHTMSHISPIPEILADIKAGKMV
                     IITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEKLGLPMMTQKN
                     GAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPEDIVQPGHIFPLRAQKG
                     GVLVRAGHTEAGVDLAQMNGLIPASVICEIINDDGTMARMPELMKFAEEHNLKIGTIA
                     DLIEYRSRTESLLEDMGNAPVQTPWGEFQQHVYVDKLSGETHLALVKGTPAADTETLV
                     RVHEPFSVMDFIQANPRHSWSLPKALERIQQAESGVVILLHRTEDGASLLDRTLPKGA
                     NQAYKWDSKSYGIGAQILVGLNVKKLRVLGQPSSFTGLTGFGLEVVGFEEAEK"
     gene            complement(2195..3205)
                     /locus_tag="WJJ54_001436"
     CDS             complement(2195..3205)
                     /locus_tag="WJJ54_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ7342294.1"
                     /translation="MIFSIIVPIYNVEKYLRCCVDSVLAENFADYEMILVDDGSPDGC
                     GKICDEYAGKYPHIKVIHQENGGLSDARNAGIRAAKGDYLIFLDSDDYWADTNRSKNA
                     GGILFDLQQLADKKVDLILHPSSFNYRDIPKGADFSDNDFVRHFETLVEGRYYIANAW
                     TKIVRREIIIKNNLFFPKGYIHEDFPYSLQLARFIKTFAFYDNPFYQYRVLGGSISHN
                     IKYKNFSDVLTHLDRGVDFLVENKNSPIYGGLQKFVFDNIGYLRSILVRLYFSKNIIV
                     IYRKYFSFKEKCRKIFGAKAIRPVFIGKTAFIIGLPILRLLVPPMLYPAIKAVYQKFF
                     SE"
     gene            complement(3361..3954)
                     /gene="ribA"
                     /locus_tag="WJJ54_001437"
     CDS             complement(3361..3954)
                     /gene="ribA"
                     /locus_tag="WJJ54_001437"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEZ7342295.1"
                     /translation="MSEMLNHVASCRLPTEWGVFTMHGFEEANGQEHVALTVGNFSDG
                     NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLRQEGRGIGLINK
                     IRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLK
                     DAGINVVERIPLHVGENLENKRYLQTKADKLGHLMSE"
     gene            complement(3947..4624)
                     /locus_tag="WJJ54_001438"
     CDS             complement(3947..4624)
                     /locus_tag="WJJ54_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342296.1"
                     /translation="MPAALIKDFLLTQGLKLPLDEVRAAYLTAQTVMDMGTASIERSV
                     LWLEHEDWRLADYLEQNSGNEEGLKRLFMALDSVFSRCKGVRAAAVYALMPSENAAFR
                     LVCLSRQGEVLENLWDLDEAAGKVSLACRSAQSGWMNIASDVRRWLDLGELSGERNHA
                     SAAQISIPVCTESGGVLGVVHVEFECAECAGTAAQVEWVALALALSEPLKLLLGMSAG
                     KDGSEDV"
     gene            4778..4862
                     /locus_tag="WJJ54_001439"
     tRNA            4778..4862
                     /locus_tag="WJJ54_001439"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4812..4814,aa:Leu,seq:tag)
     gene            5382..6416
                     /gene="purM"
                     /locus_tag="WJJ54_001440"
     CDS             5382..6416
                     /gene="purM"
                     /locus_tag="WJJ54_001440"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEZ7342297.1"
                     /translation="MSTSLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGDLGGFG
                     ALVEIGKKYKNPVLVSGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLF
                     FLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVG
                     VVEKENVITGRSIGAGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLRE
                     AVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPENTVAQIDAKSWELPK
                     LFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVQGLLGEQGETVYRLGLIRER
                     QGDEHQTQVA"
BASE COUNT         1613 a         1583 c         1686 g         1593 t
ORIGIN      
        1 atcgacgcat cgggcttggg cgaaaaaatt aaagacggca aaaaaaccgt actttctcgc
       61 gaagaagaac aaaaaatctg caataccttc acgcacaaac aggcagtgga agatttcagt
      121 gtggtaatcg gctacgatga aatcaaagcg aagaatcaca gcttgtcggc ggggcagtat
      181 ttcgaggtaa agattgatta tgtggatatt tccgccgacg aatttgcgca aaaaatggcg
      241 ggattttcag cggatttgga taaacttttc gccgaatctg ccgaattgga aaaagagatt
      301 aaggatagat tggcgatgtt gaaattcaat tcataaatac cgatgaatga aaccggtcaa
      361 acttaaaatg ccgtctgaaa gcctttcaga cggcattttg tttggtttgg aaaatactta
      421 tgccgttctt tccctgaaag agagaatcca aaaaaccaaa gccacaggaa tttatcggaa
      481 atgacaaaaa cccgacgaac cggattcccg cctgcgcggg aatgacgaat tagaagttac
      541 ccgaaatttg caaaaacaaa atccaaccca acagaccggg ttttcgtttg cacggaaata
      601 atgcaataaa taaagcaaat ataaagtatt tgaatttact atattatttt tccgcttctt
      661 caaagccgac gacttccaaa ccgaagccgg tcagaccggt gaaagatgag ggctgcccga
      721 ggacgcgcag ttttttgacg ttgaggccga cgaggatttg tgcgccgatg ccgtagcttt
      781 tgctgtccca tttgtaggct tggtttgcgc ctttaggcag ggtgcggtcg agcagggatg
      841 cgccgtcttc ggtgcggtgc agaaggatga cgacgccgct ttcggcttgt tggatgcgct
      901 caagggcttt gggcagcgac catgaatggc gcgggttggc ttgaatgaag tccatcacac
      961 tgaagggttc gtggacgcgg acgagggttt cggtgtcggc ggcgggcgtg cctttgacga
     1021 gggcgaggtg ggtttcgccg gagagtttgt cgacgtaaac gtgttgttgg aactcgcccc
     1081 acggggtttg tacaggcgca ttgcccatgt cttcgagcag gctttcggta cggctgcggt
     1141 attcgatgag gtcggcaatg gtgccgattt taaggttgtg ttcttcggca aacttcatca
     1201 gctcgggcat acgcgccatg gtgccgtcgt cgttgatgat ttcacagatg acggaggcag
     1261 gaatcagccc gttcatttgc gccaggtcga cgccggcttc ggtgtgtccg gcgcggacga
     1321 gtacgccgcc tttttgggcg cgaagcggaa agatatgacc gggttggacg atgtcttcgg
     1381 gtttagcggt cggggaaacg gcggtttgaa tagtcagggc gcggtcggcg gcggaaatgc
     1441 cggtggtaat gccgtgtgcg gcttcgatgg agacagtaaa gttggtgccg tattgcgcgc
     1501 cgtttttttg ggtcatcatc ggcagcccga gtttttcgac catttcgccg tccatcggca
     1561 ggcagaccaa gccgcgcgcg tgtttgatca tgaagttgat ggcttcgggc gtgacgaatt
     1621 gcgccgccat cagcaggtcg ccttcgtttt ctcggtcttc ggcatcggtg atgatgacca
     1681 ttttgccggc tttgatgtcg gctaggattt cggggatggg ggagatatgg gacatggtgt
     1741 gttttcctgt gtgttcggac gggcgggcgg tgtgttcggt atcgagccaa aaggcgggca
     1801 tttttgccgc ctgttcgatt ttacgggctt ttttctcgcc gaaggatttg tttttcaaaa
     1861 gggcggagag ttcgcctgtg ttgagggcaa cggcttcagc aaaacgagtt tgcaaaccgc
     1921 cgtagtgttc tgctatccat tgccgcaggt tgcggcggcg cagaccggct gtgtcggtca
     1981 tcgtttcatc ctttgtagaa atcggatgta gcggattgta atcgcgtatt taccaaaaag
     2041 caaatctgtt ttttcgctaa accgaattat ttgctttttg gtaaacagat gccgtctgaa
     2101 gccggattcg tggcttcaga cggcattgcc gcaaccccgc cggcggggcg gctgtttctt
     2161 cccgcccgct tccgattcgg ggtttgccgg aagcttattc cgaaaaaaat ttttgataaa
     2221 cggccttgat tgccgggtac agcataggcg gtacgagcag gcgcaatatc ggcaatccta
     2281 tgatgaatgc ggtcttcccg ataaaaaccg gacggattgc cttcgcgccg aatatctttc
     2341 tgcatttttc tttaaatgaa aaatatttcc ggtagatgac gataatgttt ttggaaaaat
     2401 aaagccttac caatatagac ctcagatagc cgatattgtc gaagacaaat ttttgcaaac
     2461 cgccgtagat gggggaattt ttgttttcga ctaaaaaatc cacaccccgg tcgagatgcg
     2521 tcagcacatc gctgaaattt ttgtatttga tgttgtggct gatagagccg ccgagaacgc
     2581 ggtactggta aaaagggtta tcgtaaaagg caaaagtctt gataaaacgc gccaattgca
     2641 aactgtacgg gaaatcctcg tgaatgtatc cttttgggaa aaacagattg tttttgatga
     2701 tgatttcccg cctgacaatc tttgtccacg cgttggcgat atagtaccgc ccctccacca
     2761 gcgtttcaaa atggcggaca aaatcattat ccgaaaagtc cgcccctttg gggatgtcgc
     2821 ggtaattgaa ggacgaggga tgcaggatca aatcaacctt tttgtctgca agttgttgta
     2881 aatcaaagag aatccccccc gcgttttttg aacggttggt atcggcccaa tagtcgtcgc
     2941 tgtccaaaaa gattaggtaa tcgccttttg ccgcccggat accggcgttg cgggcatccg
     3001 acagcccgcc gttttcttga tgaatcactt ttatatgcgg atatttgcct gcatattcgt
     3061 cgcaaatctt cccgcagccg tccggcgaac cgtcatcgac caaaatcatt tcataatcgg
     3121 caaaattttc ggcaagcacg gaatccacgc agcagcggag gtatttttcc acattgtaaa
     3181 tagggacgat gatggagaaa atcataaata tcaatccatt atattaagat gtttgcgcgt
     3241 atgcctcaaa cccgcgctcg caatgcgttt gcatccacta taaaacttat tgctttatca
     3301 aggtatggaa acctgtttcc cgaaaggcgg cgcaggatgc ccgttccctg caactttgcc
     3361 ttattccgac atcagatgtc ccagcttgtc tgctttggtt tggaggtagc gtttgttttc
     3421 aaggttttcc ccgacgtgca gggggatgcg ttcgaccacg ttaatcccgg catctttcag
     3481 ggtttggatt ttttcggggt tgttggtcag cagtttgacc gagcggatgc ccagatattc
     3541 gtagatagat tgcgccaaac ggaaatcgcg ggcatcgacg ggcagcccga gtgccaaatt
     3601 ggcttcaacc gtatccatac cttggtcttg cagatgatag gcgcggattt tgttaatcag
     3661 cccgatgccg cgtccttcct gacgcagata gacgatgatg ccgcgcccct ctgtctgtac
     3721 cgccctcatg gccgcttcaa gttgaggtcc gcagtcgcat tttctcgaga acagcgcatc
     3781 gcccgtcagg cattcggagt ggatgcgcgt cagaaccgga ttgccgtctg aaaaattacc
     3841 gacggtcagc gcgacgtgtt cctgcccgtt tgcctcttca aagccgtgca tcgtaaatac
     3901 gccccattcg gtcggcaggc ggcaggatgc cacatggttc aacatttcag acatcttcac
     3961 tcccatcttt tccggcagac atacccaaca gcagtttcaa aggttcggac aaagccaagg
     4021 caagagccac ccattccacc tgtgctgccg tacccgcaca ctctgcgcat tcaaattcca
     4081 catgaaccac gcccaacaca ccgccacttt ccgtgcagac cggaatggaa atttgcgccg
     4141 ccgaagcatg attgcgttct cccgaaagct ctcccaaatc caaccaacga cgcacatccg
     4201 aggcaatatt catccagccg ctttgcgccg aacggcaagc cagcgaaacc ttgcctgccg
     4261 cttcatccaa atcccacagg ttttccaaaa cctcgccctg ccgggacagg caaaccagcc
     4321 gaaaggcggc attttcagac ggcatcaggg cataaacggc tgcggcgcgc acgcctttac
     4381 agcgtgaaaa caccgaatcc aaagccatga aaagccgttt cagaccttcc tcattcccgc
     4441 tgttttgctc caaataatcg gcaagcctcc aatcctcatg ctcaagccac aaaaccgaac
     4501 gctcaatcga agccgtcccc atatccatta ccgtctgcgc cgtcagatac gccgcccgaa
     4561 cctcgtcaag cggcagcttc aaaccctgag tcagcagaaa atccttaatc aaagcagcag
     4621 gcatacccaa attccgtcaa taaaaacaaa aaaccgcccg attccgatgt caggcggacg
     4681 aaaaacagat tttaccgccc caaaccccaa gccatcaaca gccccgccga aaaccttgca
     4741 caaaaaaaca aaatctgtat aattgtccaa ttcccatgcg gacgtggcga aattggtaga
     4801 cgcaccagat ttaggttctg gcgccgagag gtgtgagagt tcgagtctct ccgtccgcac
     4861 caataatgat aaataaatca tatagttaat gcttatcggg acaaattagt gccacaaaac
     4921 ataagtcgtc tgcttttcag cgggcggctt ttttatctgc ctatatgttt caacacgcag
     4981 aacggtacat aaagtgccgc catttgttct accccgaatc agaagcgggt gcttccgccc
     5041 gcaatcagat tcaccgcccc taatgccggg gtttcaactg gaaagaagaa aatattgatt
     5101 ttgatgatgg catcaaaaaa ccccttccgc ccgtctgcca aaaggaatgg ttaagaaaag
     5161 caatgcgtct tttgatggaa cgcgatatat aaggaattga ggggaagggc aggcgggttt
     5221 ctgcccgtta atcctgcgga cgatcccgcc aaacccgaca cgcgcgggca tatggcggat
     5281 tgtttacaat attgtctaaa aatctgaacc tgcaaacgcg aaataaggta gaatacgccc
     5341 cgttatttta ccgtccaatc cccatttacc aaggaaaaat gatgagtact tcattgagtt
     5401 accgcgatgc aggtgtcgat atcgacgcag gcgaccaact ggtcgaaaac atcaaaccgt
     5461 ttgccaaacg caccatgcgt ccggaagtat tgggggattt gggcggtttt ggcgcattgg
     5521 tcgaaatcgg caagaaatat aaaaatcccg tattggtcag cggtacggac ggcgtgggta
     5581 ccaagctcaa acttgccttt gattgggata aacacgatac ggtgggcatc gaccttgttg
     5641 caatgagtgt caacgatatt ttggttcaag gagcagaacc tctgtttttc ttggattatt
     5701 tcgcctgcgg caaattggat gttccgcgcg caaccgatgt catcaaaggc attgcacaag
     5761 gttgcgaaga atccggctgc gccctgattg gcggggaaac tgccgaaatg ccgggtatgt
     5821 atcccgtcgg agaatacgat ttggcgggtt ttgccgtcgg cgtagtggaa aaagagaatg
     5881 tcattaccgg ccgcagcatc ggcgcgggcg atgtggtatt gggtttggct tccaacggcg
     5941 cacattcaaa cggctattcc cttatccgta aaatcatcga acgcgacaat cccgatttgg
     6001 atgccgagtt tgataatggc aaaaccttgc gtgaggctgt tattgcgccg acccgtctgt
     6061 atgtgaaacc gattcttgcc gctttggaaa aatttaccat taaaggtatg gcacacatta
     6121 ccggcggcgg cattaccgaa aacgtgccgc gcgtgttgcc tgaaaacacg gttgcacaaa
     6181 tcgatgctaa atcgtgggaa ttgcccaagc tcttccaatg gcttcaaaag gcgggcaatg
     6241 tggaaaccca agaaatgtac cgaaccttta actgcggcat cggcatggtc gttattgttg
     6301 ctgccgaaga tgccgatgcg gttcagggtc tcttgggtga acaaggtgaa acagtttacc
     6361 gtttaggttt gatccgtgag cgtcagggag acgagcatca aacccaggtt gcctgattgc
     6421 ttctatagcg aaatgccgtc tcaaacatgg gtttggacgg catttttata gagga
//
LOCUS       DAWKJW010000109         6359 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.109, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000109 DAWKJW010000000
VERSION     DAWKJW010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6359
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.109"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(391..1608)
                     /gene="nqrF"
                     /locus_tag="WJJ54_001441"
     CDS             complement(391..1608)
                     /gene="nqrF"
                     /locus_tag="WJJ54_001441"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HEZ7342298.1"
                     /translation="MEIILGIVMFTVIVLVLALMILFAKSKLVSEGDITIKVNGEKEL
                     TMPAGGKLLGALANEGIFIPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREARE
                     GCRLSCQVSVKTDMDIEVPEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFR
                     AGGYIQIEAPPHTVAYKDFDIPKEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEK
                     GIIMLNVRIATPPPRVPDAPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFI
                     GGGAGMAPMRSHIFDQLKRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHV
                     ALSDPLPEDNWDGYTGFIHNVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLG
                     VEDENILLDDFGG"
     gene            complement(1622..2215)
                     /gene="nqrE"
                     /locus_tag="WJJ54_001442"
     CDS             complement(1622..2215)
                     /gene="nqrE"
                     /locus_tag="WJJ54_001442"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HEZ7342299.1"
                     /translation="MEHYLSLFIKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVA
                     VIFVLGLSVPVNQLVYSLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVP
                     ALYNALGIYLPLITVNCAIFGAVSFMAQREYNFGESVVYGFGAGLGWMLAIVALAGIT
                     EKMKYSDAPKGLKGLGITFIAAGLMAMAFMSFSGIQL"
     gene            complement(2219..2845)
                     /locus_tag="WJJ54_001443"
     CDS             complement(2219..2845)
                     /locus_tag="WJJ54_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HEZ7342300.1"
                     /translation="MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVM
                     GISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLS
                     VFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGMMLLVVATVRELIGSGKL
                     LGYTVFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE"
     gene            complement(2845..3621)
                     /locus_tag="WJJ54_001444"
     CDS             complement(2845..3621)
                     /locus_tag="WJJ54_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HEZ7342301.1"
                     /translation="MAKKFDKDSFSGTLIVVLAVSLICSVIVAGAVVGLKPIQEKQKL
                     QDKQGYILSVAGLMDKNTDISKTFAERIEQRVVDLATGEYVKDAPKDFSARVAAKDPA
                     QSIQIKPEDDLAGIKSRAKYTEVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIQPD
                     GNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGQGKLALHVGKGAGSDKEHG
                     VDALSGASLTSKGVQGSFAYWFGENGYIPYLNKLKSAGAQ"
     gene            complement(3614..4846)
                     /locus_tag="WJJ54_001445"
     CDS             complement(3614..4846)
                     /locus_tag="WJJ54_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HEZ7342302.1"
                     /translation="MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKA
                     AHVRDALDSKRMMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQSIANDWHYTLAD
                     ALGINMSSEAGVLGKMLFGAIYFLPIYATVFVVGGFWEVLFATVRKHEINEGFFVTSI
                     LFALIVPPTLPLWQAALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSG
                     DAVWTAVDGYSGATALAQWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLAL
                     LIGGAFIVFARIASWRIIAGVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAI
                     GMLFMATDPVSASFTNVGKWWYGALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPIF
                     DYFVAQANIKRRKARSNG"
     gene            complement(4849..6192)
                     /locus_tag="WJJ54_001446"
     CDS             complement(4849..6192)
                     /locus_tag="WJJ54_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HEZ7342303.1"
                     /translation="MIKIKKGLNLPIAGRPEQVIYDGPVITEVALLGEEYAGMRPSMK
                     VKEGDAVKKGQVLFEDKKNPGVVFTAPVSGKIAAIHRGEKRVLQSVVIAVEGNDEIEF
                     ERYAPEALANLSGEEVRRNLIQSGLWTALRTRPFSKIPAVDAAPFAIFVNAMDTNPLA
                     ADPVVVIKEAAEDFRRGLLVLSRLTEHKIHVCKAAGADVPSENAANIETHEFGGPHPA
                     GLSGTHIHFIEPVGANKTVWTINYQDVIAIGCLFTTGRLNTERVIALGGSQVNKPRLL
                     RTVLGAKVSQITAGELVDADNRVISGSVLNGAIAQGAHDYLGRYHNQISVIEEGRSKE
                     LFGWVAPQPDKYSITRTTLGHFLKNKLFKFTTAVNGGDRAMVPIGTYERVMPLDILPT
                     LLLRDLIVGDTDSAQALGCLELDEEDLALCSFVCPGKYEYGPLLRKVLETIEKEG"
BASE COUNT         1520 a         1642 c         1682 g         1515 t
ORIGIN      
        1 aacaaaccgg tgttttacca accggtttgt caaggtttaa tggtcagcgc gtcctgcgtt
       61 gccatttatt gtagtagtat tcgtaatctt catcacgacc gcccgattca atccaatcat
      121 cgtattcggg gctgttttca aagctgtcag acattatccg tacctcgcaa aatgggttta
      181 tcgatacttt tttagttatg gaatcaacca taactaaaaa gaagtatact tctttgcttt
      241 tccgccagaa tatttaaccg cacatccgcc gcagggtaaa aatggaagtt caacgatatt
      301 gatactggta tgggcggatg ccgtctgaag ggtgttcgga cggtatcgga taaaaaaagg
      361 aagaaaccga agtttcttcc tttttgtctg ttagccgccg aaatcgtcca agaggatgtt
      421 ttcgtcttcc acacccaagt ctttgagcat tttgatgacg gactggttca taatcggagg
      481 cccgcacata taaaattcgc agtcttccgg cgcttcgtga tttttcaggt ggttttcgta
      541 aaccacgttg tgaatgaagc ctgtgtaacc gtcccagttg tcttcaggca gcggatcgga
      601 cagggcgacg tgccacgtga agttcgggaa ttctgccgcg agttggtcga agtcttcgac
      661 atagaacatc tcgcgtttgg aacgtgcacc ataccagaag gtaattttgc gtttggagtt
      721 caaacgtttc agctggtcga aaatgtggga acgcatcgga gccatacccg cgccgccgcc
      781 gataaatacc atttcggcat cggtatcttt ggcaaagaat tcgccaaacg gaccggaaat
      841 cgttacttta tcaccgggtt tgagcgacca gatgtaggac gacatttgtc ccggaggcgc
      901 atcaggtacg cgtgggggcg gcgtggcgat acgcacgttc agcataatga tgcctttttc
      961 ttcagggtat gaagccatag agtaggcgcg caaaatcggc tcgtccactt tggaaacgta
     1021 ttgccacaaa ttgtatttgt cccagtcttc gtgatattcc ttaggaatgt cgaagtcttt
     1081 gtaggcaaca gtgtgaggag gagcttcaat ttgaatgtag ccgccggcgc ggaaggggac
     1141 ttcttcgcct tcgggaatgg caagcttgag ttctttaatg aacgtggctt tgttatcgtt
     1201 ggagatgacg gtgcattccc attttttcac gccgaacact tcttcgggca cttcgatgtc
     1261 catgtcggtt ttgacgctga cttggcacga cagacggcag ccttcgcgtg cttcgcgttt
     1321 gctgatgtgg gacagctcgg tcggcaggat gtcgccgccg ccgcttttta cgacgacgcg
     1381 gcattgtccg cacgaaccgc ccccgccgca ggcggagggg ataaagatgc cttcgttggc
     1441 aagcgcgccc aagagtttgc cgccggcggg catcgtcagc tctttttcgc cgttgacttt
     1501 gatggtgatg tcgccttcgc tgaccagttt ggatttggca aatagaatca tcagtgccaa
     1561 aaccaaaacg atgacggtaa acatcacgat acctaaaata atctccatac cggtcccttt
     1621 cttataactg gatgccggag aacgacataa acgccatcgc catcaggccg gcggcgataa
     1681 aggtaatgcc caagcctttg aggcctttgg gagcgtccga atatttcatt ttttcggtaa
     1741 tgcccgccaa agcgacaatc gccaacatcc agcccaagcc cgcgccgaag ccgtatacaa
     1801 cggactcgcc gaagttgtat tcgcgttgcg ccataaacga tacggcgccg aaaatcgcgc
     1861 agttcacggt aatcagcggc aggtagatgc ccaacgcgtt atagagggcg gggacgaatt
     1921 tatccaagaa catttccaaa atctgcacca aagcggcaat cacgccgatg aaggtgatga
     1981 atttcaaaaa ggtcaaatcc acgccttcga caatcgcgcc gtctttgagc agcgagtaaa
     2041 cgagttggtt gacagggacg gacagcccga gtacgaaaat taccgccaca cccaaaccga
     2101 atgcggtgga tacttttttg gataccgcca aaaacgtgca catacccaaa aagaaggata
     2161 gtgccatatt ttcaatgaag acggatttga tgaagaggct caaatagtgt tccatagctt
     2221 attcctccgc ctgttcgggt ttccaggtac gcagtcccca aatcaaaaag ccgatgatga
     2281 agaacgcgct gggggcgagc aggaacaagc cgttggtctg ataccagccg ccgtcctgca
     2341 cggtttggaa aacggtgtag cccaagagtt tgcccgagcc gatcagttcg cggacggtgg
     2401 cgacgacaag cagcatcatc ccgtagcccg cgccgttgcc gatgccgtcg atcaggcttt
     2461 ccagcggcgg ctctttcatc gcaaatgctt cggcgcggcc catcacgata cagttggtaa
     2521 taatcagacc gacgaatacg gaaagctgtt tggacaattc gtaggcaaat gcctgcaaga
     2581 gttggtcgac cagcgtaacc agcgacgcga taatcgccat ttgcacgata atacggatgc
     2641 tgttggggat gtagttgcgt accagcgaaa tgaagaagct ggaaaaaccg gttaccaaag
     2701 ctacggaaat acccatcacg atggccgtct gaagtttggt ggtaaccgcc aaagccgaac
     2761 aaatccccaa aacctgcaag gcaatcgggt tgttgtcgat aaagggtgaa aacattaagt
     2821 gtttcaagcg tttcatatca gccattattg cgctcctgct gatttcaatt tgttcaggta
     2881 ggggatatag ccgttttcgc cgaaccagta ggcgaacgaa ccttgcacgc ctttggatgt
     2941 cagcgatgcg ccggagaggg catctacgcc gtgttctttg tccgaacccg cgcctttgcc
     3001 gacgtgcagg gcgagtttgc cttgtccgtc aaacagtttt ttgccgacga atttttgctg
     3061 ccacaaagga ttgccgattt cgccgcccaa gcccggggtt tcgccttgtt cgtagtaggt
     3121 aatgccattg atggtgttgc cgtcaggttg gatggcgacg aagccgtaca tgaccgacca
     3181 caaaccgttg ccgtgcatag gcaggatgat ttgcccgatt ttgccgtctt caccttttac
     3241 caaataaacc tcagtgtatt tggcacggct tttgatgcct gccaaatcgt cttcgggttt
     3301 gatttggatg ctttgcgcgg gatctttggc agcaacacgc gcgctgaagt ctttcggcgc
     3361 gtctttcaca tattcgccgg tcgccaaatc gacaacacgt tgctcgatac gctcggcaaa
     3421 ggttttgcta atgtcggtgt ttttatccat caaaccggct acgctcaaga tatagccttg
     3481 tttgtcttgg agtttttgtt tctcttggat gggtttcaag ccgacgaccg caccggcaac
     3541 gatgaccgag caaatcaggc tgaccgccaa cacgacaatc agcgtgccgc tgaagctgtc
     3601 tttatcgaat ttcttagcca ttgctgcgcg cctttctgcg tttgatgttc gcttgtgcga
     3661 cgaaatagtc gaaaatcggg gcaaacaggt tggcaaacag aatcgccaac atcatgcctt
     3721 cggggtaagc cggattgacc acgcggatta acacgcacat cacaccgatc agcgcaccgt
     3781 accaccattt gccgacattg gtaaaggaag cggaaacagg gtcggtcgcc ataaacagca
     3841 taccgatggc gaagccgccg acgaccaaat gccagtacca aggcatagca aacatggcgt
     3901 tggtgtccga accgatgaag ttgaacagcg aagacatcgc aatcataccg atcatcacgc
     3961 cggcaataat gcgccaagaa gcgatgcggg caaacacgat aaacgcgccg ccgattaaga
     4021 gtgccaaagt ggagacttcg ccgatggagc cgggcagttt gccgataaac gcgtccatcc
     4081 aagtgatggt ttgaccggtt acggcgtttt tcaggccgtc tgcaccgtgt gccgcccatt
     4141 gcgccagcgc ggttgcgccg gaatagccgt caaccgccgt ccaaaccgca tcgccgctca
     4201 agttggcggg gtaggcgaag aacaggaagg cgcggcctgc cagcgcaggg ttcataaagt
     4261 ttttacccgt accgccgaat acttctttcg caaccacaac gccgaaagaa atacccaaag
     4321 ccgcctgcca cagcggcagc gtgggcggaa cgattaaggc aaacagaatc gaggtaacaa
     4381 agaaaccttc gttgatttcg tgtttgcgca cggtggcgaa caagacttcc caaaaaccgc
     4441 ccacgacaaa tacggtcgcg taaatcggca gaaagtaaat cgcgccgaac agcattttgc
     4501 ccaacacgcc cgcttcagac gacatattga tgcccaaagc gtcggcaagg gtgtaatgcc
     4561 agtcgttggc gatgctttgt tgcagcaaat cgggcgttaa ggcaccgaat gcctgtgcgc
     4621 cgacgttgta catgccgtaa aacatggcgg ggaacaaagc cagccacacc aaaatcatca
     4681 tgcgcttgga gtcgagcgcg tcgcggacgt gcgccgcttt gcgcgttacc gcaccggatg
     4741 tgtagaaaat cgtcgccgcc gcttcgtaga gggcatacca tttttcatgt ttgccgcccg
     4801 gcaggaagtg cggttcgatt ttttccagaa aatgtttcaa gcccataatc agccttcctt
     4861 ctcaatggtt tccagcactt tgcgcaacag cgggccgtat tcgtatttgc ccgggcagac
     4921 gaagctgcac aaagcgaggt cttcttcgtc caattccaag caacccaatg cctgcgcgct
     4981 gtcggtatcg ccgacgatta aatcgcgcaa aagcagggtg ggcaggatat ccaagggcat
     5041 cacgcgctcg taagtgccga tgggaaccat agcgcggtcg ccgccgttga cggctgtcgt
     5101 gaacttgaag agtttgtttt tcaggaaatg gccgagggtc gtccgcgtga tggagtattt
     5161 gtccggctgc ggcgcaaccc agccgaacag ctctttgctg cggccttctt cgataacgga
     5221 aatctgattg tggtagcgtc ccaaataatc atgcgcgcct tgtgcaatcg cgccgttcaa
     5281 tactgagccg gaaatcacgc ggttgtccgc gtcaaccaat tcgcccgcag taatttgcga
     5341 tactttcgca cccaaaacgg tacgcaagag gcgtggtttg ttgacttgag aaccacccaa
     5401 ggcaatcacg cgttcggtgt tcagacggcc tgttgtaaat aaacagccaa tggcaatcac
     5461 atcttgataa ttgatggtcc aaacggtttt gtttgcaccg accggctcga tgaaatgaat
     5521 gtgcgtgcca ctcaaaccgg caggatgcgg gccgccgaat tcgtgcgttt caatgttggc
     5581 ggcattttca gacggcacgt ctgcgccggc tgccttacaa acatggattt tatgctcggt
     5641 caggcggctt aataccaaca ggccgcgtct gaaatcctcg gcggcttctt tgatcacaac
     5701 cacagggtct gccgccagcg gattggtgtc catcgcattg acgaagatgg cgaacggcgc
     5761 ggcatcgacg gcgggaattt tgctgaacgg acgggtacgc agcgcggtcc acaaaccgga
     5821 ttggatcaga ttgcggcgca cttcttcgcc gcttaagttt gccaacgctt cgggcgcgta
     5881 gcgttcgaac tcgatttcgt cgttgccttc aacggcaatc acgaccgact gaagtacgcg
     5941 cttttcgccg cgatggatgg cggcgatttt gcctgaaacc ggcgcggtaa acaccacgcc
     6001 cggattcttt ttgtcttcaa acagcacttg gccttttttg acggcatcgc cttccttgac
     6061 tttcatcgag gggcgcatac cggcatattc ttcgccaagc aacgcgactt cggtaatgac
     6121 gggcccgtca taaatgactt gctccggtct gcccgcgatg ggcaggttta gacctttttt
     6181 gattttaatc atatatttgc attacttgtg atggttaagg taaaaacggc gtgttttgat
     6241 accgtgtcgc gtggcatcaa aagcattgaa taaattaatg tagcaaagtg ttagattcta
     6301 tcaggaattg tacctgtttg tcagatttgc tgcttttttc cttgcggaag ccgttttta
//
LOCUS       DAWKJW010000110         6346 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.110, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000110 DAWKJW010000000
VERSION     DAWKJW010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6346
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.110"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(84..644)
                     /locus_tag="WJJ54_001447"
     CDS             complement(84..644)
                     /locus_tag="WJJ54_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HEZ7342304.1"
                     /translation="MNMKTLLALAVSAVCSVGVAQAHEHNTIPKGASIEVKVQQLDPV
                     NGNKDVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGAG
                     GHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIH
                     TGGDNHSDHPAPLGGGGPRMACGVIK"
     gene            complement(1061..2101)
                     /gene="mutY"
                     /locus_tag="WJJ54_001448"
     CDS             complement(1061..2101)
                     /gene="mutY"
                     /locus_tag="WJJ54_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEZ7342305.1"
                     /translation="MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQ
                     VATVLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYSRARNLHKAAQQVVRQFGG
                     TFPSERKDLETLCGVGRSTAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKF
                     ENSLWTLAESLLPSENADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQNRT
                     AELPRKKTAAEVPTLPLYWLIIRNRNGAILLEKRPAKGIWGGLYCVPCFESLNGLSDF
                     AAKFSLTMADMDEQTALTHRLTHRLLMITPFEGQMPSESPSDGIWIKPAHLKDYGLPK
                     PLEIYLNGNRLE"
     gene            2264..3305
                     /locus_tag="WJJ54_001449"
                     /pseudo
     CDS             2264..3305
                     /locus_tag="WJJ54_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225132.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
     gene            complement(3328..3546)
                     /locus_tag="WJJ54_001450"
     CDS             complement(3328..3546)
                     /locus_tag="WJJ54_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342306.1"
                     /translation="MPSEALSSLRRHFAAWRRSRHTRQHHSDILPLKCPSAFRIIKIT
                     FSSFDSSRTAHTTRLKKCRLKRIQTASA"
     gene            complement(3561..4199)
                     /locus_tag="WJJ54_001451"
     CDS             complement(3561..4199)
                     /locus_tag="WJJ54_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HEZ7342307.1"
                     /translation="MSKLTPREILTAGAVVPVMAIDDLSTAIDLSHALVEGGIPTLEI
                     TLRTPVGLDAIRLITKEVPNAIVGAGTVTNPEQLKAVEDAGAVFAISPGLHESLAKAG
                     RNSGIPLIPGVATPGEIQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTG
                     GISLATAPDYLALPNVLCVGGSWLTPKEAVKNKDWDTITRLAKEAAALKPKA"
     gene            complement(4380..6215)
                     /gene="edd"
                     /locus_tag="WJJ54_001452"
     CDS             complement(4380..6215)
                     /gene="edd"
                     /locus_tag="WJJ54_001452"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HEZ7342308.1"
                     /translation="MNTTPIHSKLAEITGRIIERSRPTREKYLAKIRSAKQMGRLERN
                     QLGCSNLAHGYAAMPKSIKIEMLQETVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQ
                     KNGATAQVAGGTPAMCDGITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVC
                     DKIVPGLMIGALSFGHIPGIFVPAGPMSSGIGNKEKARTRQLFAEGKVGRNELLKSEM
                     GSYHSPGTCTFYGTANSNQMMMEMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIK
                     NGTIKPLGEMLTEKSFINALIGLMATGGSTNHTMHLVAMARAAGVILNWDDFDEISSI
                     IPLLIRVYPNGKADVNHFTAAGGLPFVIRELLNAGLLHDDVDTVVGHGMRHYTKEPFL
                     IDGKLEWREAPETSGNDDILRKADNPFSPDGGLRLMKGNIGRGVIKVSAVREGCRIIE
                     APAIVFNDQREVLAAFERGELERDFVCVVRYQGPRANGMPELHKLTPPLGILQDRGFK
                     VALLTDGRMSGASGKVPASIHMTPEALMGGNIAKIRTGDLIRFDSVSGELNVLINETE
                     WNAREVESIDLGANQQGCGRELFANFRSMTSSAETGAMSFGGEFA"
BASE COUNT         1410 a         1534 c         1775 g         1627 t
ORIGIN      
        1 gctgaagtcg tgaattaaat gctaaatatc tagcaaaaaa gtgcggtcaa aatttaccgc
       61 acttttcgtt tcgaacaatc gaattattta atcacgccac atgccatacg tgggccgcca
      121 ccgccaagtg gagctggatg atcggagtga ttatcaccac ccgtgtggat cataatagag
      181 tgaccgcgaa catcatctaa atgtttaaga cgtggtgcta aaacaggatt tgttgctgtg
      241 ccatcatgca atacagttaa tgcaggtaaa tcacctaagt gtgcatcatc ttgccatggg
      301 taaccatgtt gttttgcacc tttaggatcc cagtgaccgc ctgcgcctaa accagctgtc
      361 aatttacctt ctttttcttt tggctcacag cttgggtttt catggatgtg gaaaccatgt
      421 aagccttcgc ttaatccttg taaatcaggg gtaaacacaa gaccatagtt agattcagta
      481 atagtcactg tacccacatc tttgttaccg tttactggat caagttgttg cactttcact
      541 tcaatagaag cacctttagg tatcgtatta tgctcgtgtg cttgcgcaac accaactgaa
      601 catactgcac taaccgctag tgctaataag gttttcatat tcattgcaat ctcctttatt
      661 gcagtaaaaa ctcgcgacta ttttagtcaa ttttgtttta aaagccgata aatttttacg
      721 aaaattttac attaattgtt atttgcagaa aattagaacc cgttatcacg tcttggataa
      781 atgccaaaac cattgtgatt cagagaatta aaaagaaaaa tttcggaatc ctcatccttt
      841 tctgaaacct gattgcggta tccatggctt tgtctttgtc atttaagttt gtgttcatgt
      901 ttttgacctt ctttgctttt taaatccttt ttaaattgcc gacttctacc gttccaaatg
      961 tcccatttga acattatccc gccgcctaaa atacgaccca aattcatcgg ttgttcttgc
     1021 tgcgatacct gcaaacaaca gttcaatggg tttattttgt ttattctaac ctattaccgt
     1081 ttaaataaat ttccaaaggc ttgggcaaac cgtaatcttt caaatgcgcc ggctttatcc
     1141 aaatgccgtc tgaagggctt tcagacggca tttgtccttc aaacggcgta atcatcagca
     1201 accggtgcgt cagccggtgg gtcagggcgg tttgttcgtc catatctgcc atggtcaggg
     1261 agaatttggc ggcaaagtcg gaaagcccgt tcaaactttc aaaacacggc acgcaataca
     1321 gcccgcccca aatgcctttg gcggggcgtt tttccagcaa aatcgcgccg ttccggttgc
     1381 ggataatcag ccagtaaagc ggcagggtcg gtacttcggc ggcggttttt ttgcgcggca
     1441 gctcggcggt gcggttttgc tttttcgctt cgcagatgtc cgccatcggg cattggtggc
     1501 acaagggttt cgtccgtttg cacacggtcg cgcccaaatc catcaaacct tgtgtatagg
     1561 caggcatatc ggcgttttca gacggcagca ggctttcggc aagtgtccag agcgagtttt
     1621 caaatttttt gtcctgcgga ttgccgtcgc gggcgaacac gcggcagagt acgcgtttga
     1681 cgttgccgtc caaaatggtt tcgcggcggt tgaaggagaa ggcgcaaatg gcggcggcgg
     1741 tgcttctgcc tacgccgcag agggtttcca agtctttgcg ctccgacgga aacgtgccgc
     1801 cgaattgcct gacgacttgt tgcgcggctt tgtgcaggtt gcgcgcgcgg ctgtaatagc
     1861 ccaagcccgc ccacaacgac aacacttcgt cttgcggcgc ggcggcaagc gtctgaacgg
     1921 tcgggaattt ttctaagaag cgcggatagt agtccaacac ggtggcgact tgcgtttgct
     1981 ggagcatgat ttcggaaagc cagacgcaat aagggttttt gacctgccaa gggaggtggt
     2041 ggcgaccgtg ttgtttttgc cagcggatga gccgttcgga gaaggggatg ggtgtgttca
     2101 ttaatatcaa tcggtggttt tatttatatt taaaacggta tgttattgta taacattgtg
     2161 aaaataattc ttattgactt attttttgta ggggcatata actcatataa agaaacttta
     2221 ttgcggtatt gaaattattt atcaacaagc aaggagtatc agcatgaaag caatggttta
     2281 tcacggcgca aacgacatcc gttttgaaga aaaaccccgt ccgcagatta tcgatccgac
     2341 cgatgcggtg gtgaaaatcg tcaaaaccac gatttgcggt accgatttgg gtatttggaa
     2401 aggcaaaaaa acccgaagtc gccgacggtc gtattctcgg tcatgaaggc atcggtattg
     2461 tagaagaagt cggcgatgct gtaaaaaaca tcaaagtcgg cgataaagtc attatttcat
     2521 gcgtcagcaa atgctgtact tgcgacaact gcaaaatcca actttattcg cattgccgca
     2581 acggcggctg gattttgggc tacatgattg acggcacgca ggcagaatac gtccgcacgc
     2641 cttatgccga caacagcctc gtgccgctgc ccgacaacgt caacgaagaa gtcgccctgt
     2701 tgttgagcga cgctttgccg accgcacacg aaatcggcgt gcaatacggc gatgtcaaac
     2761 ccggcgacac cgtattcatc gcaggtgccg ctcctgtcgg tatgtccgcc ttgttgaccg
     2821 cccaactgta tagccccgcc gccattatcg tgtgcgatat ggacgaaaac cgtttgaaac
     2881 tggcgaaaga gttgggcgcg acccatacca tcagccccgc ttccggcgac gtctccaaac
     2941 aagttttcgc catcgtcggc gaagacggcg tagattgtgc catcgaagcg gtcggtatcc
     3001 ctgcaacttg gaatatgtgc caagacatcg tgaaacccgg cggccatatc gccgttgtcg
     3061 gcgtacacgg tcaatccgtt gatttcaaac tggaaaaact gtggattaaa aagcttgcca
     3121 tcactaccgg cctggtaaac gccaatacca ccgaaatgct gatgaaggca atttccagca
     3181 gctccgtcga ttacaccaaa atgttgaccc accgtttcaa attcagcgaa ttggaaaaag
     3241 cctacgacgt gttcaaacac gccgccgaaa atcaagcgat gaaagtggtt ttggaagcgg
     3301 attaatcggc gttgaatcag ttgtttttta agcggatgcc gtctgaatgc gtttcagacg
     3361 gcattttttc agccgcgtag tatgggctgt ccggctgctg tcgaatgaac tgaacgttat
     3421 ttttattatg cggaaggcgg atgggcattt taggggcagt atgtcggagt ggtgctgccg
     3481 tgtatgccga ctgcgccgcc aagcggcaaa atgccgtctg agactggaaa gggcttcaga
     3541 cggcattttt acgatgcggt tcaggctttg ggtttcaatg ccgccgcttc tttggcgaga
     3601 cgggtgatgg tgtcccagtc tttgtttttc acggcttctt tcggcgtcag ccatgagccg
     3661 ccgacgcaca ggacgttggg cagtgccaag taatcgggcg cggtggcgag gctgatgccg
     3721 cctgtcgggc agaagcgaac atcggcgtaa gggccgtaca gggctttgag catggctttg
     3781 ccgccaacga cttcggcagg gaagagtttg agggtgtcga tgccgtgttc caaagccagt
     3841 tggatttcgc ccggggtggc aacaccggga atcaggggga tgccgctgtt gcggccggct
     3901 ttggcgaggg attcatgcag ccccgggctg atggcgaaaa ccgcgcctgc gtcttcgacg
     3961 gctttaagct gttcgggatt ggttaccgta cctgcgccga cgatggcgtt gggcacttct
     4021 ttggtaatca ggcggatggc atcgaggccg acaggggtgc gcagggtgat ttcgagggta
     4081 gggatgccgc cttcgacaag ggcgtgggac aaatcgatgg cggtgcttaa gtcgtcaatc
     4141 gccattaccg gcacaactgc gccggcggtc aaaatttcgc ggggggtcag tttggacatt
     4201 tcggttctcc gggtggaatg gggtatttta ttaagatggg acaggtcgta ggtcggattc
     4261 aagaaaccga catcttggac ggctgtgtcg gattcgagaa tccaacctac gtctatctta
     4321 aaacacttga ataatttttc agacggcctt cggtctgaaa aggccgtctg aaacgcgcat
     4381 caggcaaatt cgccgccgaa gctcatcgcg ccggtttcgg cgctgctggt catgctgcgg
     4441 aagttggcga aaagttcgcg gccgcagcct tgttggttcg cgcccaagtc gatgctttcg
     4501 acttcgcggg cattccattc ggtttcgtta atcaggacgt tgagttcgcc gctaacggag
     4561 tcgaagcgga tcaggtcgcc ggtacggatt ttggcgatgt tgccgcccat cagggcttcg
     4621 ggcgtcatgt ggatggaggc cggaactttg ccggatgcgc cggacatacg accgtcggtc
     4681 agcagtgcca ctttgaagcc gcggtcttgc aggatgccca aaggcggggt cagtttgtgc
     4741 aattcgggca taccgttggc acgcgggcct tggtagcgga cgacgcacac aaaatcgcgt
     4801 tccaactcgc cgcgttcaaa cgcagccaac acttcgcgtt ggtcgttgaa cacgatggca
     4861 ggcgcttcaa taatgcggca gccttcgcgc acggcggaca ctttaatcac gccacgtccg
     4921 atgttgcctt tcatcaggcg cagaccgccg tcgggggaga acgggttgtc agctttacgc
     4981 aggatgtcgt cgttgccgct ggtttcgggg gcttcgcgcc attcgagttt gccgtcgatg
     5041 aggaaaggct ctttggtgta gtggcgcata ccgtgtccga cgacggtatc gacatcgtcg
     5101 tgcaacaggc ctgcattcag caattcgcgg ataacgaaag gcagtccgcc cgctgcggta
     5161 aagtgattca cgtcggcctt gccgttcgga taaacgcgga tgagtagtgg gatgatggag
     5221 gaaatttcgt cgaagtcgtc ccagttcaaa atcacgccgg ccgcacgcgc catagcgacg
     5281 aggtgcatgg tgtggttggt cgaaccgccg gttgccatca ggccaatcaa ggcgttgata
     5341 aaggattttt cggtcaacat ttcgcccaaa ggtttaatcg tgccgttttt gatgccgcgc
     5401 gcgaggtgtc cggcggcgta gcgagtcagc gcttcgcgca ggtcggtgta agggtggacg
     5461 aaggcggcgg caggcaggtg cacgcccatc atttccatca tcatttggtt ggagtttgcc
     5521 gtgccgtaga aagtgcaggt gcccgggctg tggtaagaac ccatttcgct tttcaaaagt
     5581 tcgttgcgtc cgaccttgcc ttcggcgaaa agctggcggg tgcgggcttt ttctttgttg
     5641 ccgataccgc tggacatcgg gcctgcgggg acgaagatac ccggaatatg accgaacgaa
     5701 agcgcgccta tcatcaaacc cggaacgatt ttgtcgcata cgcccataaa caggctgccg
     5761 tcaaacattt gatgcgacag cccgacggcg gtactcatgg caatcacgtc gcgggagaac
     5821 agcgacagtt ccatgccggc gtagccttgc gtgatgccgt cgcacatggc gggcgtgccg
     5881 ccggcgactt gggcggtcgc gccgtttttc tgcgcttcgt ctttgatttg gtcagggaag
     5941 tctttaaacg gctggtgtgc ggaaaccatg tcgttgtagg cggtgatgat gcctaagttg
     6001 gggacggttt cctgaagcat ttcgattttg atacttttag gcatggcagc atagccgtgt
     6061 gccaagttgc tgcagccgag ctggttgcgc tctaagcgtc ccatttgttt ggcactgcgg
     6121 atcttcgcca gatatttttc acgcgtcgga cggctgcgtt caataatgcg cccggtgatt
     6181 tcggcgagtt tggagtggat aggagtagtg ttcacggtcg gtctcctgtc ggaacggggg
     6241 gtattgggga tttgtttgtg cgtttctgat tttttgtatt gggtgtgggg catttggcgt
     6301 ttcagacgac ctttcaaacc ttacaagggg tcgtctgaaa acctca
//
LOCUS       DAWKJW010000111         6339 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.111, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000111 DAWKJW010000000
VERSION     DAWKJW010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6339)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6339)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6339
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.111"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            102..998
                     /gene="glyQ"
                     /locus_tag="WJJ54_001453"
     CDS             102..998
                     /gene="glyQ"
                     /locus_tag="WJJ54_001453"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEZ7342309.1"
                     /translation="MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRAL
                     GPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGI
                     DPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
                     GIERLAMYLQGVENVYDLVWAKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQ
                     FNDYEAQAKRLLAVEEASLALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRAL
                     SRAVAQKYVESREKLGFPLIKK"
     gene            1115..3178
                     /locus_tag="WJJ54_001454"
     CDS             1115..3178
                     /locus_tag="WJJ54_001454"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEZ7342310.1"
                     /translation="MTTQTLLIELLTEELPPKALNNLGNHFAASVAEGLEKAQLIAGA
                     AEFTVYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK
                     IEDLTIVHDGKQDVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGSSTFTFVR
                     PVHGLIVLHGGDIVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVA
                     SFAERKAAIQTALEGQARSLNAAVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQE
                     CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDPSHIIRGNERVLRARLSDAEFF
                     YKQDQKATLESRLPKLSSVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAAR
                     LAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIA
                     AAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFD
                     SFPKGLLNEKTPSETADFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDLTAKLQAVA
                     AFKQLPEAAALAAANKRVQNLLKKADAALGAVNESLLQQDEEKALFAAAQGLQPKIAA
                     AVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI
                     ALLGE"
     gene            3195..4241
                     /locus_tag="WJJ54_001455"
     CDS             3195..4241
                     /locus_tag="WJJ54_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEZ7342311.1"
                     /translation="MPSEAFRRHRAYRENKLQPLVSVLICAYNVEKYFAQSLAAVVNQ
                     TWRNLDILIVDDGSTDGTLAIARRFQEQDGRIRILAQPRNSGLIPSLNIGLDELAKSG
                     MGEYIARTDADDIAAPDWIEKIVGEMEKDRSIIAMGAWLEVLSEEKDGNRLARHHRHG
                     KIWKKPTRHEDIADFFPFGNPIHNNTMIMRRSVIDGGLRYNTERDWAEDYQFWYDVSK
                     LGRLAYYPEALVKYRLHANQVSSKYSVRQHEIAQGIQKTARNDFLQSMGFKTRFDSLE
                     YRQIKAVAYELLEKHLPEEDFERARRFLYQCFKRTDTLPAGAWLDFAADGRMRRLFTL
                     RQYFGILHRLLKNR"
     gene            4283..5110
                     /locus_tag="WJJ54_001456"
     CDS             4283..5110
                     /locus_tag="WJJ54_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEZ7342312.1"
                     /translation="MQNHVISLASAAERRAHITDTFGVRGIPFQFFDALMPSERLEQV
                     MAELVPGLSAHPYLSGVEKACFMSHAVLWKQALDEGLPYITVFEDDVLLGEGAEKFLA
                     EDAWLQERFDPDSAFIVRLETMFMHVLTSPSGVADYGGRAFPLLESEHWGTAGYIISK
                     KAIRFFLDRFAALPPEGLHPVDLMMFSDFFDREGVPVCQLNPALCAQELHYAKFHDQN
                     SALGSLIEHDRLLNRKQQWRDSPANTFKRRLIRALTKISREREKRRQRREQFIVPFQ"
     gene            5122..5217
                     /locus_tag="WJJ54_001457"
     CDS             5122..5217
                     /locus_tag="WJJ54_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lacto-N-neotetraose biosynthesis glycosyl
                     transferase"
                     /protein_id="HEZ7342313.1"
                     /translation="MDIVFAADGRMRRLFTLRQYFGILRRLLKNR"
     gene            5259..6101
                     /locus_tag="WJJ54_001458"
     CDS             5259..6101
                     /locus_tag="WJJ54_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEZ7342314.1"
                     /translation="MQNHVISLASAAERRAHIAATFGARGIPFQFFDALMPSEELNRM
                     MAELVPGLAKQHLLSEVEKACFMSHAVLWKQALDEGLPYVAVFEDDVLLGKDAEKFLA
                     EDTWLEERFDKDSAFIVRLETMFAKVIVRPDKVLNYENRSFPLLESEHWGTAGYIISR
                     EAMRFFLERFAVLPAEWIKAVDWMMFTYFFDKEGMPVYQVNPALCTQELHYAKFLSKN
                     SMLGSDLEKDREQERRHRRSLKVMFDLKRALGKFGREKKKRMERQRQAELEKAYGRRV
                     ISFK"
BASE COUNT         1632 a         1715 c         1647 g         1345 t
ORIGIN      
        1 atgtatgccg tgttttcaaa tcagtctgtc tttgagataa acctatccaa acagcaatgg
       61 aaacagtaaa ataaaccctt tattttatcg aatcataagc catgcttacc ttccaacaaa
      121 tcatcttcaa actgcaaaca ttctgggcag acaaaggctg caccgtcatc caacctttcg
      181 acatggaagt cggcgcaggt acttcccacc ccgccacctg cctgcgcgca ctcggccccg
      241 agccttggtt tgccgcctac gtccaaccca gccgccgccc caaagacggc cgctacggcg
      301 acaaccccaa ccgcctgcaa cactattacc aattccaagt cgcccttaaa cccgcccccg
      361 ccaatatcca agacctttat ctcgactccc tgcgcgaatt gggcatcgat cccaaagtcc
      421 acgacatccg ctttgtcgaa gacgactggg aaaaccccac cctcggtgca tggggtttgg
      481 gctgggaagt ctggctcaac ggcatggaag taacccagtt tacctatttc caacaagtcg
      541 gcggcattga ctgcacgcct gtactcggcg aaattaccta cggcatcgaa cgcttggcga
      601 tgtacctgca aggcgtagaa aacgtctatg acctcgtttg ggcaaaaacg ctggacggga
      661 atacagtaac ttacggcgac gtgtaccacc aaaacgaagt cgagcaatcc acctacaact
      721 tcgaatacag cgatgccgac tggctgctgc gtcagttcaa cgactacgaa gcgcaagcca
      781 aacgcctgct cgccgttgaa gaagcaagcc ttgcgctgcc cgcctacgag ctggttctca
      841 aagcagggca tacgttcaac cttttagacg cacgcggcgc gatttccgta accgaacgcg
      901 ccacctacat cgggcgcatc cgcgcgttga gccgcgccgt ggcgcaaaaa tatgtcgaaa
      961 gccgcgaaaa actgggcttc ccgttgatta aaaaataacg atacgtcgtc tgaaacaggt
     1021 tttcagacgg ccttttttgc gtatccatta atacaggccg tacggtatat gcaggcttta
     1081 taagcagggc ctacggacaa acagaaagtc tcatatgaca acccaaaccc ttttaatcga
     1141 actccttacc gaagaactcc cgcccaaagc cctcaataat ctgggcaacc attttgccgc
     1201 ctccgttgcc gaaggcttgg aaaaagcgca actgatagcc ggtgcagctg aatttaccgt
     1261 ctacgcttct ccgcgccgtt tggcggttca agtcaaaaac gtcaaagccg ttcaagccga
     1321 ccaaaaaatc gtgaaaaaag gccctgccgt ggcgaatgcc atgaaagacg gtgcgccgac
     1381 caaggctttg gaaggtttcg cacgcggtgc gggcgcgaaa atcgaagact tgaccatcgt
     1441 ccacgacggc aaacaggatg tgtacgccta cgaatacgtc caaaccggca aaccgctggg
     1501 cgaacttttg gaagacatta tcaatcaagc cgttaagaaa ctgccgattc cgaaagtgat
     1561 gcgttggggc agcagcacgt ttaccttcgt gcgccctgtt cacgggctga ttgtgctgca
     1621 cggcggcgac atcgtaaacg tcagcgtttt gggtctgcaa agcagcaatc aaaccttggg
     1681 acaccgcttc ttgtccaacg gcgaaatcac cattgaaaac gccgacagct acgccgaaca
     1741 aatgcgcggg caaggcaaag tcgtcgcttc gtttgccgag cgcaaagccg cgattcagac
     1801 ggcattggaa gggcaggcgc gcagtctgaa cgccgccgtc gccgccgatg aagcattgtt
     1861 ggacgaagta accgcgctgg tcgaatggcc tgttgttttg gaagccggtt ttgaggaaca
     1921 tttcctcgcc gtgccgcagg aatgcttgat tttaacgatg cagcaaaacc aaaaatactt
     1981 tccgctgctc gaccaaaacg gcaagctgat gaaccgcttc ctgctggttt ccaacctgca
     2041 aaccgaagac ccgtcgcaca tcatccgagg caacgaacgc gttttgcgcg cgcgcctgtc
     2101 tgatgccgag ttcttctaca aacaagacca aaaagcgact ttggaaagcc gcctgccgaa
     2161 attgtccagc gtggtgtacc acaacaaaat cggctcgcaa gccgaacgca tcgaacgcct
     2221 gcaaagcatt gccgcccaca tcgccaaagc attgggcgcg gatgccgccg ctgccgaacg
     2281 cgccgcgcgt cttgccaaag ccgacttggt aaccgaaatg gttggcgagt tccccgaact
     2341 gcaaggcacg atgggcaaat actatgcacg tttggacggc gaaaccgaag aaatcgccga
     2401 agccatcgag cagcactatc agccgcgttt tgccggcgac aagctgcccg aaagcaaaat
     2461 tgccgccgcc gtggcactgg cggacaagct ggaaaccctg gtcggcattt ggggcatcgg
     2521 tctgattccg accggcgaca aagaccccta cgccctgcgc cgcgccgcct tgggtatttt
     2581 gcggatgctg atgcagtacg gtttggacgt gaacgaactg attcagacgg cattcgacag
     2641 cttccccaaa ggtttgctca acgaaaaaac gccgtctgaa accgccgact ttatgcaggc
     2701 gcgccttgcc gtgttgctgc aaaacgatta tccgcaagac atcgtcgccg ccgtactcgc
     2761 caaacagccg cgccgtttgg acgatttgac cgccaaactg caagccgttg ccgcgttcaa
     2821 acagctgccc gaagccgccg cgctcgccgc cgccaacaaa cgcgtgcaaa acctgctgaa
     2881 aaaagccgat gccgcgttgg gcgcggttaa cgaaagcctg ttgcaacagg acgaagaaaa
     2941 agccctcttt gccgccgcgc aaggcttgca gccgaaaatc gccgccgccg tcgccgaagg
     3001 caatttccaa accgccttgt ccgaactggc ttccgtcaaa ccgcaagtcg atgcattctt
     3061 tgacggcgtg atggtaatgg cggaagatgc cgccgtaaaa caaaaccgcc tgaacctgct
     3121 gaaccgcttg gcagagcaaa tgaacgcggt agccgacatc gcgcttttgg gcgagtaacc
     3181 gttgtacagt ccaaatgccg tctgaagcct tcagacggca tcgtgcctat cgggagaata
     3241 aattgcagcc tttagtcagc gtattgattt gcgcctacaa cgtagaaaaa tatttcgccc
     3301 aatcattagc cgccgtcgtg aatcagactt ggcgcaactt ggatattttg attgttgatg
     3361 acggctcgac ggacggcaca cttgccattg cccggcgttt ccaagaacag gacggccgca
     3421 tccgcatcct cgcgcagccg cgcaattccg gcctgattcc ctctttaaac atcgggctgg
     3481 acgaattggc aaagtcagga atgggggaat atattgcacg caccgatgcc gacgatattg
     3541 ccgcccccga ctggattgag aaaatcgtgg gcgagatgga aaaagaccgc agcatcatcg
     3601 cgatgggcgc gtggctggaa gttttgtcgg aagaaaagga cggcaaccgg ctggcgcggc
     3661 atcacaggca cggcaaaatt tggaaaaagc cgacccgaca cgaagatatt gccgactttt
     3721 tccctttcgg caaccccata cacaacaaca cgatgattat gaggcgcagc gtcattgacg
     3781 gcggtttgcg ttacaacacc gagcgggatt gggcggaaga ttaccaattt tggtacgatg
     3841 tcagcaaatt gggcaggctg gcttattatc ccgaagcctt ggtcaaatac cgccttcacg
     3901 ccaatcaggt ttcatccaaa tacagcgtcc gccaacacga aatcgcgcaa ggcatccaaa
     3961 aaaccgccag aaacgatttt ttgcagtcta tgggttttaa aacccggttc gacagccttg
     4021 aataccgcca aataaaagca gtagcgtatg aattgctgga gaaacatttg ccggaagaag
     4081 attttgaacg cgcccgccgg tttttgtacc aatgcttcaa acggacggac acgctgcccg
     4141 ccggcgcgtg gctggatttc gcggcagacg gcaggatgcg gcggctgttt accttgaggc
     4201 aatacttcgg cattttgcac cgattgctga aaaaccgttg aaaaacgccg ctttatccaa
     4261 cagacaaaaa acaggataaa ttatgcaaaa ccacgttatc agcttagctt ccgccgcaga
     4321 acgcagggcg cacattaccg ataccttcgg cgtgcgcggc atcccgtttc agtttttcga
     4381 cgcactgatg ccgtctgaaa ggctggaaca ggtaatggcg gaactcgtac ccggtttgtc
     4441 ggcgcacccc tatttgagcg gagtggaaaa agcctgcttt atgagccacg ccgtattgtg
     4501 gaagcaggca ttggacgaag gtctgccgta tatcaccgta tttgaggacg acgttttact
     4561 cggcgaaggc gcggagaaat tccttgccga agacgcttgg ctgcaagaac gctttgaccc
     4621 cgattccgcc tttatcgtcc gcttggaaac gatgtttatg cacgtcctga cctcgccctc
     4681 cggcgtggcg gactacggcg ggcgtgcctt tccgctgttg gaaagcgaac actgggggac
     4741 ggcgggctat atcatttcca aaaaagcgat acggtttttc ctggacaggt ttgccgccct
     4801 gccgcccgaa gggctgcacc ccgtcgatct gatgatgttc agcgattttt tcgacaggga
     4861 aggagtgccg gtttgccagc tcaatcccgc cttgtgcgcc caagagctgc attatgccaa
     4921 gtttcacgac caaaacagcg cattgggcag cctgatcgaa cacgaccgcc tcctgaaccg
     4981 caaacagcaa tggcgcgatt cccccgccaa cacattcaaa cgccgcctga tccgcgcctt
     5041 gaccaaaatc agcagggaaa gggaaaaacg ccggcaaagg cgcgaacagt tcattgtgcc
     5101 tttccaataa aaggaggaga gatggacatc gtatttgcag cagacggcag gatgcggcgg
     5161 ctgtttacct tgaggcaata cttcggcatt ttgcgccgat tgctgaaaaa ccgttgaaaa
     5221 acgccgcttt atccaacaga caaaaaacag gataaattat gcaaaaccat gttatcagct
     5281 tagcttccgc cgcagaacgc agggcgcaca ttgccgcaac cttcggcgcg cgcggcatcc
     5341 cgtttcagtt tttcgacgca ctgatgccgt ctgaagaact gaatcggatg atggcggaat
     5401 tggtgccggg attggcaaaa cagcacctgt tgagcgaagt ggaaaaagcc tgctttatga
     5461 gccacgccgt attgtggaaa caggcattgg atgaaggtct gccctatgtt gccgtatttg
     5521 aggatgatgt cctgcttggc aaagacgcag aaaagttcct tgccgaagat acttggttgg
     5581 aagagcgttt tgataaggat tctgccttta tcgttcgttt ggaaacgatg tttgcgaaag
     5641 ttattgtcag accggataaa gtcctgaatt atgagaaccg gtcatttcct ttgctggaga
     5701 gcgaacattg ggggacggct ggctatatca tttcgcgtga ggcgatgcgg tttttcttgg
     5761 aaaggtttgc cgttttgccg gcagagtgga ttaaagcggt agattggatg atgtttactt
     5821 atttctttga taaggagggg atgcctgttt atcaggttaa tcccgcctta tgtacccaag
     5881 aattgcatta tgccaagttc ctcagtaaaa acagtatgtt gggtagcgat ttggaaaaag
     5941 atagggaaca agaaagaaga caccgccgtt cgttgaaggt gatgtttgac ttgaagcgtg
     6001 ctttgggtaa attcggtagg gaaaagaaga aaagaatgga gcgtcaaagg caggcggagc
     6061 ttgagaaagc ttacggcagg cgggtcatat cgttcaaata gtttgtgtaa aatatagcgg
     6121 attaaaatta gaaatggata cactgtcatt cccgcgcagg cgggaatcta gtccgttgag
     6181 tttcagtcat ttccgataaa tcaccgcaac gttaaatttc tagattcccg cctgcgcggg
     6241 aatggcggtg gtgggatttc tgtttttccg acaaattcct aaaacttaaa gttccgttat
     6301 tcccgcgaga acagaaaacc aaaaacagaa acctaaaat
//
LOCUS       DAWKJW010000112         6250 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.112, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000112 DAWKJW010000000
VERSION     DAWKJW010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6250)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6250)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6250
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.112"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            318..764
                     /gene="yciA"
                     /locus_tag="WJJ54_001459"
     CDS             318..764
                     /gene="yciA"
                     /locus_tag="WJJ54_001459"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HEZ7342315.1"
                     /translation="MQHEEGNRQRPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLG
                     GGILAAEIARGRIVTVAVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKVDVWVKTL
                     MNDCVTEDRYLVTEAVFTYVAIDAEGNPRPIPKEGNPKLAGLLPTP"
     gene            complement(815..1636)
                     /locus_tag="WJJ54_001460"
     CDS             complement(815..1636)
                     /locus_tag="WJJ54_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ7342316.1"
                     /translation="MAVLITGASAGFGEAMCRAFVGAGYRVIGAARRGDRLQVLADEL
                     GALFYPLEMDVSRRESVENALNGIPDEFSDIDCLINNAGLALGLDTADKADFEDWETM
                     IQTNVLGLTFLTRKILPQMVERGGGYVMNLGSIAGNYAYAGSNVYGATKAFVRQFSLN
                     LRAELADKNIRVTNIEPGLCGDTEFSNVRFKGDDERAAGVYEGVEFIRPEDIAETALW
                     LYRRPAHMNVNTIEIMPVAQTFAGMKVIKKAVPEVREDFEKQSMSLFSRIRSWFK"
     gene            1755..2213
                     /locus_tag="WJJ54_001461"
     CDS             1755..2213
                     /locus_tag="WJJ54_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEZ7342317.1"
                     /translation="MKTQISLAAAAITLLLSACGGSGIPSQPKGEISENRTAAFKSMM
                     PEFTRMGKMVKDEEPYDVEKFKQAAAAFAESSKKPFTLFESDPQGNGRALPAVWSDGA
                     KFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE"
     gene            complement(2377..3492)
                     /gene="lst"
                     /locus_tag="WJJ54_001462"
     CDS             complement(2377..3492)
                     /gene="lst"
                     /locus_tag="WJJ54_001462"
                     /EC_number="2.4.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyllactosaminide
                     alpha-2,3-sialyltransferase"
                     /protein_id="HEZ7342318.1"
                     /translation="MGLKKACLTVLCLIVFCFGIFYTFDRVNQGERNAVSLLKDKLFN
                     EEGEPVNLIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFNQIKDKAER
                     AYFFHLPYGLNKSFNFIPTMAELKVKSMLLPKVKRIYLASLEKVSIAAFLSTYPDAEI
                     KTFDDGTINLIQSSSYLGDEFSVNGTIKRNFARMMIGDWSIAKTRNASDEHYTIFKGL
                     KNIMDDGRRKMTYLPLFDASELKAGDETGGTVRILLGSPDKEMKEISEKAAKNFNIQY
                     VAPHPRQTYGLSGVTTLNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNV
                     HVYALKPASLPEDYWLKPVYALFTQSGIPILTFDDKD"
     gene            3593..3697
                     /locus_tag="WJJ54_001463"
                     /pseudo
     CDS             3593..3697
                     /locus_tag="WJJ54_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            3927..6152
                     /locus_tag="WJJ54_001464"
     CDS             3927..6152
                     /locus_tag="WJJ54_001464"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEZ7342319.1"
                     /translation="MTQKSTIIYTHTDEAPALATQSLLPIVQAFARHADIDVKTADIS
                     LSGRILAAFPEYLTEAQRVPDALAELGELVKQPDANVIKLPNISASVPQLTAAIKELQ
                     SKGFAVPDYPADPQTDEEKAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNP
                     HSMGAWTKDSKTHVATMQSGDFFHNEQSVTVPDATSVSIVFTDKQGNKKELRAPVALK
                     AGEITDATVMSKKALLAFLAEQVQDAKAKGALFSLHMKATMMKVSDPIIFGHAVKVFF
                     APVFEKFGGKLAAAGVNVNNGFGNLLANLDKLDADTRTAVEAEIAAVYAANPDLAMVD
                     SDKGITNLHVPSDVIVDASMPAMIRNSGRMWDKDGKAQDTKAVIPDSSYAGVYQATID
                     FCREHGAFDPTTMGTVPNVGLMAQAAEEYGSHNKTFEIEADGQVQVIDAAGKVLMQHD
                     VEAGDIWRMCQTKDAPVKDWVQLAVNRARLSNTPAVFWLDENRPHDKSLLAKVKAYLA
                     ELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLRWDSLGEFLALAVSFEHLAQKTGN
                     TKAQVLADTLDAATEKLLLNDKSPKRKTGELDNRGSHFYLTLYWAQELAAQDKDAELK
                     AAFAPLAKSLAENEAKIVEELSAVQGKAVDIGGYYAANPEKAAQAMRPSATFNQALST
                     L"
BASE COUNT         1674 a         1849 c         1387 g         1340 t
ORIGIN      
        1 cgtgggaatg acggttcagt tgcgttccga caacaccgca atctcgaaac ccgtcattcc
       61 cgcgcaggcg ggaatctaga cctgtccgca cagaaactta tcggataaaa acagttgctc
      121 aaacccctcg ttctagattc ccacttccgt gggaatgacg gttcagttgc tacggcccca
      181 ccctacaata cgccttgcga atctgttccg cgcccgccct tgtatgtctc aaatgggtta
      241 aactacacac ttcccgactt cccgtttcgg gcaggggtgc aggttcgatt tatatttcaa
      301 taaaacaagg aaactttatg cagcacgaag aaggcaaccg ccaacgccct caaggcgaac
      361 tgctcctgcg taccgtcgct atgccgcgcg ataccaatcc caaccaagac attttcggcg
      421 gctggattat gtcgcagatg gatttgggcg gcggcatatt ggcggcggaa atcgcgcggg
      481 gacgcatcgt taccgtcgcc gttcaggaaa tgaacttcat ccgcccggtc aaggtcggca
      541 acgtcgtctg ctgctacggg cattgcgtcc gcgtgggcaa cacttccctc cagcttaaag
      601 tcgacgtctg ggtgaaaact ttgatgaacg attgcgttac cgaagaccgc tacctcgtaa
      661 ccgaagccgt gttcacttat gttgccatcg atgcggaagg caatccgcgc ccgattccga
      721 aagaaggcaa ccccaaattg gcgggcttat tgcctactcc gtaaaaatac ccgtaaaaat
      781 gccgtctgaa actgtcttca gacggcattt tgcatcattt gaaccaggac ctgatgcggg
      841 aaaacagcga catactctgt ttttcaaagt cttcccgcac ttcgggcacg gcttttttta
      901 tcactttcat tcctgcaaaa gtctgcgcca cgggcataat ttcaatcgtg ttcacattca
      961 tatgcgccgg ccggcggtac agccacaatg cggtttccgc aatatcttct gggcggataa
     1021 attccacacc ctcatacacg cccgccgccc tctcgtcatc gcctttgaag cgcacgttgg
     1081 aaaactccgt atcgccgcac aaacccggct cgatattggt aacgcggatg ttcttatccg
     1141 ccaactccgc gcgcaaattc aggctgaact gccgcacaaa cgccttggtc gccccgtaaa
     1201 cgttgctgcc ggcataagca taattgcctg caatcgaacc caaattcatc acatagccgc
     1261 cgccgcgttc caccatttgc ggcaaaattt tgcgcgtcag gaacgtcaaa cccaaaacat
     1321 tggtttgaat catcgtttcc caatcttcaa aatccgcctt gtccgccgtg tccaaaccca
     1381 aagccagccc ggcattgttg atgaggcagt cgatgtcgga aaattcatcg gggatgccgt
     1441 ttaaggcatt ttccaccgac tcgcgtcgcg acacgtccat ttccaaaggg taaaacaaag
     1501 cacccaattc atccgccaaa acctgaagcc tgtccccacg gcgcgccgca ccgataacgc
     1561 ggtatcccgc cccgacaaac gcgcggcaca tcgcttcgcc gaatcctgcc gaagcaccgg
     1621 taattaaaac agccattgtt tttcctttct ttctcgtttc ccaaacctgt ttcaggtatc
     1681 ataacgctct tcagacggca tcgcgccggc tgaaaatgac aacaaccata ccaccacgac
     1741 aggacacatt caatatgaaa acccaaatca gccttgctgc tgccgccatc acactgctcc
     1801 tttccgcctg cggaggcagc ggaatacctt cccaacccaa aggcgaaatt tccgaaaacc
     1861 gcaccgccgc gttcaaatcc atgatgcccg aattcacacg catgggcaaa atggtcaaag
     1921 acgaagaacc ttacgatgtc gaaaaattca aacaggctgc cgcggcgttt gccgaaagca
     1981 gcaagaaacc gttcacactt tttgagtccg atccgcaagg caacggccgc gccctgcccg
     2041 ccgtttggtc ggatggtgca aaatttgaag ccgaaaaaac aaaattcgcc gccgccgtcg
     2101 aaaaactcaa cgccgcagca caaaccggca aactggatga aatcaaagcc gcctacggcg
     2161 aaaccggcgc aagctgcaaa tcctgccacg acagtttccg cgcgcccgaa taacatccaa
     2221 aacaaaacaa tgccgtctga agccttcaga cggcattttc tttgccattt caccaagcgc
     2281 aaagcaatca aaaattatcg ttaattcaaa aaatacgcca tatcctgatt tttgccttac
     2341 ttactccgcc attttctatt ttgatttgct atgcgattaa tctttatcgt caaatgtcaa
     2401 aatcgggatg ccggattggg taaacagggc atacaccggc ttgagccaat aatcttccgg
     2461 aagggaagcc ggtttcaatg cgtaaacgtg cacattggga aaatccttca tcgtcaacgc
     2521 cgcgccgctg aaaaaggtat aaatttcata cctcgtatgc gggtttttct taatctcgcg
     2581 caaaatatag tcttcgatga catagggcga atttaatgtg gttacgccgg aaagcccgta
     2641 ggtttggcgg gggtgcggtg cgacatattg tatgttgaag ttttttgccg ccttttccga
     2701 aatttccttc atctccttgt cgggcgaacc caaaagtatc cgcaccgtgc cgcccgtttc
     2761 gtcccccgcc ttcagttcgg acgcatcgaa cagcggcagg taagtcatct tgcggcggcc
     2821 gtcgtccata atgtttttca aacccttgaa tatcgtgtaa tgctcgtcgg aagcattgcg
     2881 ggttttggcg atgctccaat ctccgatcat catccgggca aaattccgct tgatcgtccc
     2941 gtttacagaa aactcatcgc ccaaatagct gctgctttga attaaattga ttgtcccgtc
     3001 gtcaaaggtt ttgatttccg catccgggta agtgctcaaa aaggcggcaa tgctgacttt
     3061 ttccaaactt gccaaataaa tccgcttgac tttcggcagc agcatcgact ttaccttcag
     3121 ctccgccatc gtcggaatga aattaaacga tttgttcaaa ccgtagggca ggtggaaaaa
     3181 atacgcccgc tccgccttat cctttatctg attgaaataa taatcgtatt tttcattcct
     3241 gttttcagac atcagcacca cataaaaccg ctcccccgga tgctgcgcca taatcctttc
     3301 tgccaccttc atctgcaata tggtatagca gaaaatcaga ttgaccggtt ccccctcttc
     3361 attgaagagt ttgtccttca gcagggaaac cgcattcctt tccccctgat ttacccggtc
     3421 aaatgtataa aatatcccga aacaaaaaac aatcaggcac aacacggtca aacaagcctt
     3481 tttcaagccc atatccctaa aactccattc cgacaaattg aacatacgcc ccgagtgtcc
     3541 cgggacggaa aaatgcggaa ttttagcaga tattccgaca gttaccgaat attatagtga
     3601 tttaaattta aatcaggaca aggcgacgaa gccgcagaca gtacaagcag tacgacaagg
     3661 cgaggcaacg ctgtactggt ttaaatttaa accactataa aatcaatttc accgaaaata
     3721 tgccgccgca catcaggcac agcacctccg acaccgccgc caaaagcggg aaaaccattt
     3781 cccccttcct ttcacgtcgc cgcgttcaaa cacgccaaga tcgaacaaag cgcgaacaaa
     3841 gccgccaaaa tatgccataa tagccacgca cattccccgc gcaatgtgtt ccaaaagaaa
     3901 aaaccaacct acaagagaat aatcctatga ctcaaaaatc caccattatt tatacccata
     3961 ccgacgaagc ccccgcgctg gcgacccaat cgctgctgcc gattgtgcag gcttttgccc
     4021 gccacgccga tattgatgtc aaaactgccg acatttccct gtccggccgt attttggcgg
     4081 catttcccga atatctgacc gaagcgcagc gcgtacctga tgcgcttgcc gaattgggcg
     4141 aactggtgaa acaacccgat gcaaacgtaa tcaaactgcc gaacatcagc gcatccgtac
     4201 cgcaactgac tgccgcgatt aaagaattgc agtctaaagg ctttgccgtt cccgactatc
     4261 ccgccgaccc gcaaaccgat gaagaaaaag ccgtgcgcga acgctacgac cgcatcaaag
     4321 gcagcgcggt aaaccctgtc ctgcgcgaag gcaactccga ccgccgtgcg cctaaagcag
     4381 tgaaaaactt tgccaaaaaa aatccgcaca gcatgggcgc atggacgaaa gactccaaaa
     4441 cccacgttgc caccatgcaa agcggcgact ttttccataa cgaacaatct gttactgtac
     4501 ccgatgcgac ttccgtatcc atcgtgttca ccgacaaaca aggcaacaaa aaagagctgc
     4561 gcgcgcctgt tgccctgaaa gccggcgaaa tcaccgacgc gaccgtgatg agcaaaaaag
     4621 ccctgctcgc cttccttgcc gaacaagtgc aagacgcgaa agctaaaggc gcattgttct
     4681 cgctgcatat gaaagccacg atgatgaaag tgtccgaccc gattatcttc ggacacgccg
     4741 tcaaagtatt cttcgcgcct gtatttgaaa aattcggcgg caaactggcc gccgcaggcg
     4801 tcaacgtcaa caacggtttc ggcaacctgc ttgccaatct ggacaaactg gatgcggaca
     4861 cccgcaccgc cgtcgaagcc gaaatcgccg ccgtttacgc cgccaacccc gatttggcga
     4921 tggtcgattc cgataaaggc attaccaacc tgcacgttcc cagcgatgtc atcgttgatg
     4981 cttccatgcc tgcgatgatt cgtaactccg gccgtatgtg ggataaagac ggcaaagcgc
     5041 aagacaccaa agccgtgatt cccgacagca gctacgccgg cgtttaccaa gcaaccatcg
     5101 acttctgccg cgaacacggc gcatttgacc cgacaaccat gggtactgtg cccaacgtcg
     5161 gactgatggc gcaagcggcg gaagaatacg gctcgcacaa caaaaccttt gaaatcgaag
     5221 ccgacggcca agtccaagtc attgatgcgg caggaaaagt cctgatgcag cacgacgttg
     5281 aagcaggcga catctggcgt atgtgccaaa ccaaagacgc tccggttaaa gactgggtac
     5341 aactcgccgt caaccgcgcc cgcctgagca atacgcccgc cgtgttctgg ctcgacgaaa
     5401 accgtccgca tgacaagagc ctgctcgcca aggttaaagc ctaccttgcc gaactggata
     5461 ccaacggcct cgacatccgc gtcctcgctc ccgaagaagc cgccaagttc agcctgggcc
     5521 gtctgaaaaa cggcgaagac accatctccg taaccggtaa tgtcttgcgc gactacctga
     5581 ccgacttgtt cccgattttg gaactcggca caagcgcgaa aatgctgtct atcgttccat
     5641 tgatgaacgg cggcggtatg tttgaaaccg gcgcgggcgg ttctgcaccg aaacacgtcc
     5701 aacaattcct tgaagaaaac cacttgcgtt gggactcttt gggcgaattc ctcgcgctcg
     5761 ccgtatcgtt tgaacatttg gcacaaaaaa ccggcaacac caaagcccaa gtcctcgccg
     5821 acactttgga tgccgccacc gaaaaactgc tgctaaacga caaatcgccc aaacgcaaaa
     5881 ccggcgaact cgacaaccgc ggcagccatt tctacctcac cctctactgg gcgcaagaat
     5941 tggcggcgca agacaaagat gccgaattga aagccgcatt tgcgccgtta gccaaatcgt
     6001 tggcggaaaa cgaagccaaa atcgttgaag aactctctgc cgtacaaggc aaagcggtcg
     6061 acatcggcgg ctactacgcc gccaatcctg aaaaagcggc acaagcgatg cgcccaagcg
     6121 caacctttaa tcaggcacta agcaccttat aagcacaaag gtaaaaatgc cgtctgaaca
     6181 ttcgtcgttc agacggcatt agttatccct atctgcctga ttatgattaa acgccgcacc
     6241 cattggatat
//
LOCUS       DAWKJW010000113         6089 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.113, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000113 DAWKJW010000000
VERSION     DAWKJW010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6089
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.113"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            45..452
                     /locus_tag="WJJ54_001465"
     CDS             45..452
                     /locus_tag="WJJ54_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ7342320.1"
                     /translation="MMPAYAALAFSAFTSATLLPGTSEAAFALFVHRFPEHAYGALLC
                     AGLANGLGSMVSYWMGRLLPSRKMPSEKTLNLMRRFGIWLLAFAWLPVVGDALPLAAG
                     WLRLNPWTSGLMLVVGKMARYAFILWGMQYYAA"
     gene            498..1127
                     /gene="nth"
                     /locus_tag="WJJ54_001466"
     CDS             498..1127
                     /gene="nth"
                     /locus_tag="WJJ54_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEZ7342321.1"
                     /translation="MNRQIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATD
                     VGVNKATAKLFPVADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYKG
                     EVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVE
                     DKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEYPAKA"
     gene            1265..2764
                     /locus_tag="WJJ54_001467"
     CDS             1265..2764
                     /locus_tag="WJJ54_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HEZ7342322.1"
                     /translation="MFKKYQYLALAALCAASLAGCDKAGSFFGADKKEASFVERIKHT
                     KDDGSVSMLLPDFVQLVQSEGPAVVNIQAAPAPRTQNGSGNAETDSDPLADSDPFYEF
                     FKRLVPNMPEIPQEEADDGGLNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKREY
                     TAKLIGSDVQSDVALLKIDATEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGI
                     VSAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISF
                     AIPIDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKAGGALITKILPGSP
                     AERAGLQAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGEEITIKVKLGN
                     AAEHIGASSKTDEAPYTEQQSGTFSVESAGITLQTHTDSSGGHLVVVRVSDAAERAGL
                     RRGDEILAVGQVPVNDEAGFRKAMDKAGKNVPLLVMRRGNTLFIALNLQ"
     gene            2966..4486
                     /locus_tag="WJJ54_001468"
     CDS             2966..4486
                     /locus_tag="WJJ54_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HEZ7342323.1"
                     /translation="MQLIDYSHSFFSVMPPFLALALAVITRRVLLSLGIGILVGVAFL
                     VGGNPVDGLTHLKDMVVGLAWSDGDWSLGKPKILVFLILLGIFTSLLTYSGSNQAFAD
                     WAKRHIKNRRGAKMLTACLVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDS
                     TAAPMCVLMPVSSWGASIIATLAGLLVTYKITEYTPMGTFVAMSLMNYYALFALIMVF
                     VVAWFSFDIGSMARFEQAALNEAHDETAVSDGSWGRVYALIIPVLALIASTVSAMIYT
                     GAQASETFSILGAFENTDVNTSLVFGGTCGVLAVVLCTLGTIKTADYPKAVWQGAKSM
                     FGAIAILILAWLISTVVGEMHTGDYLSTLVAGNIHPGFLPVILFLLASVMAFATGTSW
                     GTFGIMLPIAAAMAVKVEPALIIPCMSAVMAGAVCGDHCSPISDTTILSSTGARCNHI
                     DHVTSQLPYALTVAAAAASGYLALGLTKSALLGFGTTGIVLAVLIFLLKDKKRANA"
     gene            4543..5628
                     /gene="nagZ"
                     /locus_tag="WJJ54_001469"
     CDS             4543..5628
                     /gene="nagZ"
                     /locus_tag="WJJ54_001469"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HEZ7342324.1"
                     /translation="MTVPHIPRGPVMADIAAFRLTEEEKQRLLDPAVGGVILFRRNFQ
                     NIAQLKELTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMNVLGQIWDKDGASA
                     AETAARQIGWVLATELSACGIDLSFTPVLDLDWGNCPVIGNRSFHHNPEAVAHLALAL
                     QKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDRRSLSELEAADLAPFHIMSREGMAA
                     VMPAHVVYPQVDTKPAGFSEIWLKQILRRDIGFKGVIFSDDLTMEGACGAGGIKERAR
                     ISFEAGCDIVLVCNRPDLVDELREDFRIPDNPALAQRWQYMANTLGSAAAQAVIQTAD
                     FQAAQAFVAGLASPQDTAGGVKVGEAF"
     gene            5853..5929
                     /locus_tag="WJJ54_001470"
     tRNA            5853..5929
                     /locus_tag="WJJ54_001470"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5887..5889,aa:Pro,seq:cgg)
BASE COUNT         1416 a         1822 c         1514 g         1337 t
ORIGIN      
        1 cgtacaatcc gtcgccgatt tttgcctgtt tgagactgtt tgcaatgatg cccgcctacg
       61 ccgcactcgc cttttccgcc ttcacttccg ccaccctcct gcccggcaca tccgaagccg
      121 cctttgccct gttcgtccac cgctttcccg aacacgcata cggcgcgttg ctgtgcgccg
      181 gccttgccaa cggattgggc agtatggttt cctattggat gggacgtttg ctgccttccc
      241 gaaaaatgcc gtctgaaaaa acactgaatc tgatgcggcg tttcggtatt tggctgcttg
      301 cgtttgcctg gctgcccgtc gtcggcgacg cactgccgct tgccgccggc tggctgcggt
      361 tgaatccgtg gacaagcggg ctgatgctgg ttgtcggcaa gatggcgcgt tacgccttta
      421 tcctgtgggg aatgcaatat tacgccgcct gaaccgtgcg ttataatgcc gaccgcacaa
      481 acctaccgta taaaaaaatg aacagacaaa tccgccaaga aatcttcgag cgtttccgcg
      541 ccgccaaccc ccatccgacc accgagctga atttcaactc ccctttcgag cttttaatcg
      601 ccgttctgct ttcagcgcag gcgaccgatg tcggcgtaaa caaggcgacg gcgaagctgt
      661 ttccggttgc cgatacgccg caggcaatgc tggatttggg cttggacggc gtgatggaat
      721 acacgaaaac catcgggttg tataaaacca agtccaagca catcatgcag acctgccgca
      781 tcctgctgga aaaatacaag ggcgaagtgc cggaagaccg cgaggctttg gaatcgttgc
      841 cgggcgtggg gcgcaaaacg gcaaacgtgg tattgaacac agcgttcgga caccccgtta
      901 tggcggtcga tacgcatatt ttccgcgtgt ccaaccgaac caaaatcgcc cccgggaaag
      961 atgtgcgcga agtcgaagac aaactgatgc gcttcattcc taaagaattt ctgatggacg
     1021 cgcaccactg gctgattttg cacggacgct acacctgcaa ggcactcaaa ccgcaatgcc
     1081 aaacctgcat catcaacgat ttgtgcgaat atcccgccaa agcctgactg ccgccgccct
     1141 tcaaaatgaa acgcttgaaa attcggacgg acgttgtaga atttcaacct atgccgtctg
     1201 aagccgacaa aatgcgcttc agacggcatt aaagccggta ccggcatccg acaaaggaca
     1261 aaacgtgttc aaaaaatacc aatacctcgc tttggcagca ctgtgtgccg cctcgctggc
     1321 aggctgcgac aaagccggca gctttttcgg tgcggacaaa aaagaagcat ccttcgtaga
     1381 acgcatcaaa cacaccaaag acgacggcag cgtcagtatg ctgctgcccg actttgtcca
     1441 actggttcaa agcgaaggcc cggcagtcgt caatattcag gcagcccccg ccccgcgcac
     1501 ccaaaacggc agcggcaatg ccgaaaccga ttccgacccg cttgccgaca gcgacccgtt
     1561 ctacgaattt ttcaaacgcc tcgtcccgaa catgcccgaa atcccccaag aagaagcaga
     1621 tgacggcgga ttgaacttcg gttcgggctt catcatcagc aaagacggct atattctgac
     1681 caatacgcac gtcgttaccg gcatgggcag tatcaaagtc ctgctcaacg acaagcgcga
     1741 atataccgcc aaactcatcg gttcggatgt ccaatccgat gtcgcccttc tgaaaatcga
     1801 cgcaacggaa gagctgcccg tcgtcaaaat cggcaatccc aaagatttga aaccgggcga
     1861 atgggtcgcc gccatcggcg cgcccttcgg cttcgacaac agcgtgaccg ccggcatcgt
     1921 gtccgccaaa ggcagaagcc tgcccaacga aagctacaca cccttcatcc aaaccgacgt
     1981 tgccatcaat ccgggcaact ccggcggccc gctgttcaac ttaaaaggac aggtcgtcgg
     2041 catcaactcg caaatataca gccgcagcgg cggattcatg ggcatttcct tcgccatccc
     2101 gattgacgtt gccatgaatg tcgccgaaca gctgaaaaac accggcaaag tccaacgcgg
     2161 acaactgggc gtgattattc aagaagtatc ctacggtttg gcacaatcgt tcggtttgga
     2221 caaagccggc ggcgcattga ttaccaaaat ccttcccggc agccccgcag aacgtgcagg
     2281 cttgcaggca ggcgacatcg tcctcagcct cgacggcgga gaaatacgtt cttccggcga
     2341 ccttcccgtt atggtcggcg ccattacgcc gggaaaagaa gtcagcctcg gcgtatggcg
     2401 caaaggcgaa gaaatcacaa tcaaagtcaa gctgggcaac gccgccgagc atatcggcgc
     2461 atcatccaaa acagatgaag ccccctacac cgaacagcaa tccggtacgt tctcggtcga
     2521 atccgcaggc attacccttc agacacatac cgacagcagc ggcggacacc tcgtcgtcgt
     2581 acgggtttcc gacgcggcag aacgcgcagg cttgaggcgc ggcgacgaaa tcctcgccgt
     2641 cgggcaagtc cccgtcaatg acgaagccgg tttccgcaaa gctatggaca aggcaggcaa
     2701 aaacgtcccc ctgctggtca tgcgccgtgg caacacgctg tttatcgcat taaacctgca
     2761 ataacccaca taatttaacc aaaatatttt ttaaatgata aaatgcccgt caataccgat
     2821 taacgggcat tttacaaaaa tcagttggtt gattttaaac aaatattttt tacgacaaaa
     2881 aatatttccg cccattttgc caacaaaacc caaaccggag gcggacagat acgctcccat
     2941 ccggacgctt aacaccccca taaccatgca gctgatcgac tattcacatt catttttctc
     3001 ggttatgcca ccctttttgg cactggcact tgccgtcatt acccgccgcg tactgctgtc
     3061 tttaggcatc ggtattctgg tcggcgttgc ctttttggtc ggcggcaacc ccgtcgacgg
     3121 tctgacacac ctgaaagaca tggtcgtcgg cttggcttgg tcagacggcg attggtcgct
     3181 gggcaaacca aaaatcttgg ttttcctgat acttttgggt atttttactt ccctgctgac
     3241 ctactccggc agcaatcagg cgtttgccga ctgggcaaaa cggcacatta aaaaccggcg
     3301 cggcgcgaaa atgctgaccg cctgcctcgt gtttgtaacc tttatcgacg actatttcca
     3361 cagtctcgcc gtcggtgcga ttgcccgccc cgttaccgac aagtttaaag tttcccgcgc
     3421 caaactcgcc tacatcctcg actccactgc cgcgcctatg tgcgtgctga tgcccgtttc
     3481 aagctggggc gcgtcgatta tcgccacgct tgccggactg ctcgttacct acaaaatcac
     3541 cgaatacacg ccgatgggga cgtttgtcgc catgagcctg atgaactatt acgcactgtt
     3601 tgccctgatt atggtgttcg tcgtcgcatg gttctccttc gacatcggct cgatggcacg
     3661 tttcgaacaa gccgcgttga acgaagccca cgatgaaact gccgtttcag acggcagctg
     3721 gggcagggtt tacgcattga ttattcccgt tttggcctta atcgcctcaa cggtttccgc
     3781 catgatctac accggtgcac aggcaagcga aaccttcagc attttggggg catttgaaaa
     3841 taccgacgtg aacacttcgc tggtattcgg cggcacttgc ggcgtccttg ccgtcgttct
     3901 ctgcacgctc ggcacgatta aaaccgccga ctatcccaaa gccgtttggc agggtgcgaa
     3961 atctatgttc ggcgcaatcg ccattttaat cctcgcttgg ctcatcagta cggttgtcgg
     4021 cgaaatgcac accggcgatt acctctccac actggttgcg ggcaacatcc atcccggctt
     4081 cctgcccgtc atcctcttcc tgctcgccag cgtgatggcg tttgccacag gcacaagctg
     4141 ggggacgttc ggcattatgc tgccgattgc cgccgccatg gcggtcaaag tcgaacccgc
     4201 gctgattatc ccgtgtatgt ccgcagtaat ggcgggggcg gtatgcggcg accactgttc
     4261 gcccatctcc gacacgacca tcctgtcgtc caccggcgcg cgctgcaacc acatcgacca
     4321 cgttacctcg caactgcctt acgccttgac ggttgcagcc gcagccgcat cgggctacct
     4381 cgcattgggt ctgacaaaat ccgcgctgtt gggctttggc acgacaggca ttgtattggc
     4441 ggtgctgatt tttctgttga aagataaaaa acgcgccaac gcctgacccc tttccctgtt
     4501 cagacggcat atgccgtctg aagctttttg gagcaaaccg caatgaccgt cccccatatt
     4561 ccgcgcggcc ccgtcatggc agacattgcc gccttccgcc tgaccgaaga ggaaaagcaa
     4621 cgccttctcg atcccgccgt cggcggagtc atcctgttcc gccgcaactt ccaaaatatc
     4681 gcacagctca aagaactcac cgccgaaatc aaagccctgc gcacacccga actcattatc
     4741 gccgtcgatc acgaaggcgg aagggtgcaa cgtttcatcg aaggttttac ccgcctgccc
     4801 gcaatgaacg ttttagggca aatttgggac aaagacggag cgtccgccgc cgaaaccgca
     4861 gcccggcaga taggctgggt tttggcaacc gaactttccg cctgcggcat cgatttgtcc
     4921 ttcacgcccg tcttagattt ggactgggga aactgccccg tcatcggcaa ccgcagtttc
     4981 caccacaatc ccgaagcggt cgcccacctc gccctcgccc ttcaaaaagg tttggcaaaa
     5041 ggcggtatga aatcctgcgg caaacatttt cccggacacg gatttgtcga aggagacagc
     5101 catctggtct tgccggaaga caggcgcagc ctgtccgaac tcgaagccgc cgacctcgcc
     5161 cccttccaca ttatgagccg cgaaggtatg gcggcggtta tgcccgccca cgtcgtttat
     5221 ccacaagtgg acacaaagcc cgcagggttt tccgaaatct ggctcaaaca aattttgcgc
     5281 cgcgatatcg gattcaaagg cgtgattttc tcggacgatt taactatgga gggcgcgtgc
     5341 ggggcaggcg gcatcaaaga acgcgcccgc atttcctttg aggcaggttg cgacatcgtc
     5401 ctcgtctgca accgtcccga ccttgtggat gaactgcgcg aagatttccg cattcctgac
     5461 aatcccgctt tggcgcaacg ttggcaatat atggccaaca cgctcggcag tgccgccgcg
     5521 caagccgtta tacagacggc ggatttccaa gcggcgcaag cctttgttgc cggtcttgcc
     5581 tcgccgcaag acacggcggg cggcgtaaaa gtcggagagg ccttttaaat cggctgcgtt
     5641 tcaacaatct gccgatttca accgtttgtc agggaaaggc aatgattttt tcggtcaggt
     5701 agaaagttat cttattgaat tacttggaga taaggatgct tatcaacact gtattcaaac
     5761 acagcccttt caatccgccc gacacgcggc aaaaaggcaa aacggtatag gcatgccgta
     5821 ttttttgcgc tataatcacg ccttacttaa ttcggaatgt agcgcagcct ggtagcgcac
     5881 ttcgttcggg acgaaggggt cggaggttcg aatcctctca ttccgaccaa atccaaaccg
     5941 cctcggtatc cattgccgag gcggtttttc cttttgacgt caacagaaaa atgccgtctg
     6001 aaacagaatg agacctttgc aataacatag gttactaaaa ttttatgctc aatctcattt
     6061 tcaaaatgca aaacttttct gatttttcc
//
LOCUS       DAWKJW010000114         6046 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.114, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000114 DAWKJW010000000
VERSION     DAWKJW010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6046)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6046)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6046
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.114"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            131..1408
                     /locus_tag="WJJ54_001471"
     CDS             131..1408
                     /locus_tag="WJJ54_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ7342325.1"
                     /translation="MFKRSVIAMACIFALSACGGGGGGSPDVKSADTPSKPAAPVVAE
                     KETDAKEDAPQAGSQGQGAPSAQGGQDMAAVSAENTGNGGAETADNPENKDEGTQNDM
                     PQNAAESANQTGNNQSAGSSDSAPASNPAPANGGGDFGRTNVGNSVVIDGPSQNITLT
                     HCKGDSCDGDNLLDEEAPSKSEFDNLSESERMEKYKKDGKSDKFTGFVADKLQMKGTN
                     QYIIFYKPKTTSSARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNIF
                     APEGNYRYLTYGAEKLSGGSYALRVQGEPAKGEMLAGTAVYNGEVLHFHTENGRPYPS
                     RGRFAAKVDFGSKSVDGIIDSGDDLHMGTQKFKAAIDGNGFKGTWTENGGGDVSGRFY
                     GPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD"
     gene            complement(1483..1698)
                     /locus_tag="WJJ54_001472"
     CDS             complement(1483..1698)
                     /locus_tag="WJJ54_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342326.1"
                     /translation="MFKLGVYACLGLFAGWVLLLIVQLWFSFLEAELFFKITLTMAGL
                     FVIILAALLVCGQYFSEKKMKDNGFIN"
     gene            complement(1691..1906)
                     /locus_tag="WJJ54_001473"
     CDS             complement(1691..1906)
                     /locus_tag="WJJ54_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
                     /protein_id="HEZ7342327.1"
                     /translation="MKEYKVIIYQESLLSSLFFGAAKVNPVNFSAFLNKQTPEGWRVV
                     TMEKDLRRMLLFFKREAYVVILERDRV"
     gene            complement(1981..3324)
                     /gene="argG"
                     /locus_tag="WJJ54_001474"
     CDS             complement(1981..3324)
                     /gene="argG"
                     /locus_tag="WJJ54_001474"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEZ7342328.1"
                     /translation="MSQNHTILQNLPIGQKVGIAFSGGLDTSAALLWMKLKGALPYAY
                     TANLGQPDEDDYNAIPKKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGIAY
                     FNTTPLGRAVTGTMLVSAMKEDVVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPW
                     LDQQFIDELGGRHEMSEFLIANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIK
                     IVKPIMGVAFWDENVEVKPEEVSVRFEEGVPVALNGKEYADPVELFLEANRIGGRHSL
                     GMSDQIENRIIEAKSRGIYEAPGMALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLL
                     YQGRWFDSQALMLRETAQRWVAKAVTGEVTLELRRGNDYSILNTESPNLTYQPERLSM
                     EKVEDAAFTPLDRIGQLTMRNLDITDTRAKLGIYSQSGLLALGEGSVLPQLGNKK"
     gene            3449..4249
                     /locus_tag="WJJ54_001475"
     CDS             3449..4249
                     /locus_tag="WJJ54_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HEZ7342329.1"
                     /translation="MNAFNLIIIGDEILHGSRQDKHFAFFKSLLESKGLKLNQVQYLP
                     DEPDLLVRQLRRSFSDGIPTFVTGGIGATPDDHTRQAAAVALDLPVVRHAQAAGFIEG
                     VTLKRGEPLDSLEHAQRLKMADFPEGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPM
                     AEWVLDTYYAGRFNQTERGSRSVYVFEQPESRITPIMEHIEQTYPGVRSYSLPSVGWS
                     NADGTAVRPHIEFGIKAEGEAVNLLDAAWAEVLHSLDGLGAELKNRVN"
     gene            4289..5275
                     /locus_tag="WJJ54_001476"
     CDS             4289..5275
                     /locus_tag="WJJ54_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HEZ7342330.1"
                     /translation="MQYRIRRENEAPEAKNAGETLWERDIMREVLLSAYRDRRRERMW
                     KNIWRAVSTLILVALLAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKD
                     GMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASG
                     CYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFS
                     PETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLV
                     DGLGNIYSVARDVVKAPDVVDYTPKDDFGRILGRRFGAELKAGVREALQAVR"
     gene            5931..6046
                     /locus_tag="WJJ54_001477"
                     /pseudo
     CDS             5931..6046
                     /locus_tag="WJJ54_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248742.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         1488 a         1492 c         1696 g         1370 t
ORIGIN      
        1 ctaccgcata ctggcctttt tctgttaggg aaagttgcac ttcaaatgcg aatccgccgg
       61 catattttta caattttatg ggcatatggc ggaaacaata ccggctgcct tgaatatgaa
      121 ggagatgatg atgtttaaac gcagtgtgat tgcaatggct tgtatttttg ccctttcagc
      181 ctgtgggggc ggaggtggcg gatcgcccga tgttaagtcg gcggacacgc cgtcaaaacc
      241 ggccgctcct gttgttgctg aaaaagagac agatgcaaag gaagatgcgc cacaggcagg
      301 ttctcaagga cagggcgcgc catccgcaca aggcggccaa gatatggcgg cagtttcggc
      361 ggaaaataca ggcaatggcg gtgcggaaac agcggataat cccgaaaata aagacgaggg
      421 gacgcaaaat gatatgccgc aaaatgccgc cgaatccgca aatcaaacag ggaacaacca
      481 atccgccggt tcttcagatt ccgcccccgc gtcaaaccct gcacctgcga atggcggtgg
      541 cgattttgga aggacgaacg tgggcaattc tgttgtgatt gacgggccgt cgcaaaatat
      601 aacgttgacc cactgtaaag gcgattcttg tgatggcgat aatttattgg atgaagaagc
      661 accgtcaaag tcagaatttg acaatttaag tgaatctgaa cgaatggaga aatacaagaa
      721 agatgggaaa agcgataaat ttactggctt tgtcgctgat aagttacaga tgaaagggac
      781 caatcaatat attatttttt acaaacctaa aaccacttca tctgcgcgat ttaggcgttc
      841 tgcacggtcg aggaggtcgc ttccggccga gatgccgctg attcccgtca atcaggcgga
      901 tacgctgatt gtcgatgggg aagcggtcag cctgacgggg cattccggca atatcttcgc
      961 gcctgaaggg aattaccggt atctgactta cggggcggaa aaattgtccg gcggatcgta
     1021 tgccctccgt gtgcaaggcg aaccggcaaa aggcgaaatg cttgctggca cggccgtgta
     1081 caacggcgaa gtgctgcatt ttcatacgga aaacggccgt ccgtacccgt ctagaggcag
     1141 gtttgccgca aaagtcgatt tcggcagcaa atctgtggac ggcattatcg acagcggcga
     1201 tgatttgcat atgggtacgc aaaaattcaa agccgccatc gatggaaacg gctttaaggg
     1261 gacttggacg gaaaatggcg gcggggatgt ttccggaagg ttttacggcc cggccggcga
     1321 ggaagtggcg gggaaataca gctatcgccc gacagatgcg gaaaagggcg gattcggcgt
     1381 gtttgccggc aaaaaagagc aggattgatg ctgatgccgt ctgaagcggg gggcgttcag
     1441 acggcattgt gatgttgggt cgcgatccgg ttcaagtcct catcagttga taaacccgtt
     1501 gtctttcatt ttcttttcgg aaaaatactg gccgcatacc agcaaggcgg cgaggatgat
     1561 gacaaacagc cctgccatag tcagtgtgat tttgaagaac aattcggctt cgagaaaaga
     1621 aaaccaaagt tgcacaatca gcagcagcac ccagccggca aatagtccga gacaggcata
     1681 aacgccgagc ttaaacacgg tcccgctcca aaatgacgac gtaggcttcg cgtttgaaaa
     1741 acaacagcat acggcgcaaa tctttttcca tcgttacgac ccgccagcct tcgggggttt
     1801 gtttgttgag gaacgcgctg aaattgacgg ggttgacctt tgccgcgccg aaaaacaggc
     1861 tggacaacag gctttcctga taaatgatga ctttgtattc tttcatagga ttccttttaa
     1921 cataagggat catcttttca gacgacccct taagttgcta atgatgcaaa acagcaaacc
     1981 ttatttctta ttgcccaact gcggcaatac cgagccttcg cccaatgcca acaaaccgct
     2041 ttgcgagtag atacccagtt tggcgcgggt gtcggtgatg tcgaggttgc gcatcgtgag
     2101 ctgtccgatg cggtcgagcg gggtaaacgc tgcatcttcg actttttcca tactcaggcg
     2161 ttcaggttgg taggtcaggt tgggcgattc ggtgttcaga atcgagtagt cgttgccgcg
     2221 cctcagttcg agggtaactt cgccggtaac ggctttggcg acccagcgtt gggcggtttc
     2281 gcgcaacatc agtgcctgac tgtcgaacca gcggccttgg tagagcaggc ggccgaggcg
     2341 caggccgttg atgcggtatt gttcgatggt gtcttcgttg tggatgccgg ttaccaagcg
     2401 ttcgtaggcg atgtggaaca acgccatacc cggggcttcg tagatgccgc gcgatttggc
     2461 ttcgatgatg cggttttcga tttggtcgct catacctaga ctgtgacggc cgccgatgcg
     2521 gttggcttcg aggaagagtt cgacggggtc ggcgtattct ttgccgttca atgcaaccgg
     2581 cacgccttct tcaaagcgca cgctgacttc ttcgggtttg acttcgacgt tttcatccca
     2641 gaaggcaacg cccataatgg gtttgacgat tttgatgccc gagttcaaaa attccaagtc
     2701 tttggcttcg tgggtcgcgc cgagcatatt ggaatcggtg gagtaggctt tttccaccga
     2761 cattttgtag ttgaagccgt tggcaatcag aaattcgctc atttcgtggc ggccgccgag
     2821 ttcgtcgata aattgttggt cgagccaggg tttgtagatt ttcagcgcgg gattggtaag
     2881 caaaccgtag cggtagaaac gctcgatgtc gttgcctttg taggtgctgc cgtcgcccca
     2941 aatgttgacg acgtcttctt tcatggcgga aacgagcatc gtgccggtta cggcgcgacc
     3001 cagaggcgtg gtgttgaaat aggcgatgcc gccggtggaa acgtggaacg cgccgcattg
     3061 gatggcggcg atgccttcgt gtgccaactg cgcgcggcag tcgatcaggc gggcgttttc
     3121 cgcaccgtat tccattgctt ttttgggaat ggcattgtag tcgtcttcgt cgggctggcc
     3181 gaggttggca gtgtaggcat aaggcagcgc gcctttgagt ttcatccaca acagcgcggc
     3241 ggaggtatca agtccgccgg agaaggcgat gccgactttt tgaccgatgg ggagattttg
     3301 taaaatagta tggttttggc tcatgaaaaa atcctcgata gcttgaaaaa tcaaagccat
     3361 tatcttataa ataggaaata ttgtcagcca tcatgccgtc tgaacgggta ttccgccgtt
     3421 tcaggcggta tttaaaaccg aaaacattat gaatgcgttc aacctcatca tcatcggcga
     3481 cgaaatctta cacggcagcc gccaagacaa gcatttcgcc tttttcaaat ccctgctcga
     3541 atccaaaggg ctgaagctca atcaggtgca atatctgccc gacgaacccg atttgctggt
     3601 caggcaactg cgccgcagct tttcagacgg cataccgacg tttgttaccg gcggcatcgg
     3661 cgccacgccc gacgaccaca cgcgtcaagc cgcagcggtt gctttggatt tgcccgtcgt
     3721 ccgccacgcg caagccgccg ggtttatcga aggcgtaacc ctgaaacgcg gcgagccgct
     3781 tgattcgctg gaacacgccc aacgtctgaa aatggcagat tttcccgaag gcgcggaatt
     3841 ggtgcccaat ccgtttaaca acatcgccgg attttccatc cgcgagcatt atttcttccc
     3901 cggctttccc gtgatggcgc acccgatggc ggaatgggtt ttggatactt attacgccgg
     3961 ccgcttcaac caaaccgaac gcggcagccg cagcgtgtat gtgttcgagc agcccgaatc
     4021 gcgcattacg ccgattatgg agcatatcga gcaaacttat cccggcgtgc gttcttacag
     4081 cctgcccagc gtcggctgga gcaatgcgga cggaacggca gtcaggccgc atatcgagtt
     4141 cggcatcaaa gccgaaggag aagccgtcaa ccttttggac gcggcgtggg cggaagtgtt
     4201 gcacagcttg gacggattgg gagcagagct gaaaaatcgg gtaaactgaa aaccgtttgc
     4261 ccaaatcgga cgatatttaa ggaaaaccat gcaataccga atcagaagag aaaacgaagc
     4321 acccgaagca aaaaatgcgg gggaaacctt atgggagcgc gacatcatgc gcgaagtgct
     4381 gctgtccgcc tatcgggaca ggcgcaggga gcggatgtgg aaaaacatct ggcgcgccgt
     4441 cagcaccctg attctggttg ccctgcttgc cggtattttc cgaaaagacg aagccgcatt
     4501 gcagttggcg ggcaacacgc cgcataccgc agtcgtcaac ctgtacggcg aaatcggcaa
     4561 cggtgtagaa gaccaggtca aaaaactcaa agacggtatg gaggccgcct acaaaaaccc
     4621 gcaggcaaaa gccatcgtca tccgcgccaa cagccccggc ggttcgcccg tcgtctccaa
     4681 caccgctttt gaagaaatac gccgtctgaa ggcgcagcac cccggcattc ccgtttatct
     4741 cgtggcggaa gatatgtgcg cgtccggctg ctactacatc gcggcggcgg cggacaaaat
     4801 ctatgccgac ccgtccagca tcgtcggcag catcggcgtt atcggcagca gtttcgacgc
     4861 gaccggcctg atggaaaaaa tcggcgtgaa acgcagggtt aaaattgcag gcagcaacaa
     4921 aggcatgggc gatccgtttt cgcccgaaac gcccgaacag tcaaaaatct gggaagaaat
     4981 gctgaccggc atacacggcg agttcatcaa agccgtcaaa accggacgcg gcggccgcct
     5041 caaattccga caatatcccg acgtgttcag cggtcgcgtg tacacaggcg cggatgcgct
     5101 gaaagtcggg ctggtggacg gactcggcaa tatttacagc gtggcgcgag acgtggtcaa
     5161 agcccccgat gtggtggatt acactccgaa ggacgatttc ggcagaatct tgggcagacg
     5221 cttcggcgca gaactcaaag ccggcgtgcg cgaagccctg caggccgtcc ggtagcgttg
     5281 tttacagtat ttctaaggga ataccaaaat aaaaatatac acaaaaacac tcacctcccc
     5341 agtatgctgc cactaagtca gccgcgtcac tatttaccgt gcacttaaag ccgtaaaagg
     5401 caggttgtcc cgggaggttt tgttcatcct gataccgatc ggttgttgtt gctcaaagga
     5461 cagaaggccg ccgataaacg agattacctg tttgtcgcta ttgacgattt ttatactctg
     5521 ccattttgcc ggacaaaacc gcagacagtg ctgccaagtt tctgaccgaa catctgtccg
     5581 acccctgctt gtacctgatt gagtacgttt actctgacaa tgataggtaa tataaagagc
     5641 cgtccaacat gctttcggtg cagcttgtta tgataatggg attggttgga ggcttgcccg
     5701 atttgcttgt ccgcagacca acggtaaggc ggagcgggtt atccgtacct tgatggagat
     5761 gtggcatgag gaacagtcgt ttgacagtcc ggaacatcgg caaaaggagt tgtgctgctt
     5821 tattaattta ggggctgccc tagatcacta gggaaattca aattaagtta gaattatccc
     5881 tatgagaaaa agtcgtctaa gccggtataa acaaaataaa ctcattttgt tatcgtggct
     5941 atgatgtatt ggatgcgggc gaatttagcc atttccgtat caatcacagc acacattttg
     6001 ccgaacgaca aaaccatatt aatggaactg agaacttttg gaatca
//
LOCUS       DAWKJW010000115         6019 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.115, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000115 DAWKJW010000000
VERSION     DAWKJW010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6019)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6019)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6019
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.115"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(53..1456)
                     /gene="mtrE"
                     /locus_tag="WJJ54_001478"
     CDS             complement(53..1456)
                     /gene="mtrE"
                     /locus_tag="WJJ54_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MtrE"
                     /protein_id="HEZ7342331.1"
                     /translation="MDTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFKNDTAD
                     SGIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTL
                     AANANGSRQGSLSGGNVSSSYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDA
                     AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQE
                     ALIESAKADYAHAARSREQARNALATLINQPIPDDLPAGLPLDKQFFVEKLPAGLSSE
                     VLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGTVGTGSAELGGLFKSGTGVWS
                     FAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQSAFQDVANALAAREQLDKAY
                     DALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYSAEGAALSAQLTRAENLAD
                     LYKALGGGLKRDTQTDK"
     gene            complement(1511..4714)
                     /gene="mtrD"
                     /locus_tag="WJJ54_001479"
     CDS             complement(1511..4714)
                     /gene="mtrD"
                     /locus_tag="WJJ54_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MtrD"
                     /protein_id="HEZ7342332.1"
                     /translation="MAKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTIT
                     LHATYPGASAQVMEDSVLSVIERNMNGVEGLDYMSTSADSSGSGSVSLTFTPDTDENL
                     AQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNI
                     VPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADIGSALSAQNVQISAGSIG
                     SLPAVRGQTVTATVTAQGQLGTAEEFGNVILRANTDGSNVYLKDVARVGLGMEDYSSS
                     TRLNGVNTTGMAVMLSNSGNAMATAKAVKERMATLEKYFPQGMSWKTPYDTSKFVEIS
                     IEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLT
                     MFAMVLVIGIVVDDAIVVVENVERIMAGEGLPPKEATKKAMGQISGAVIGITAVLISV
                     FVPLAMFSGATGNIYKQFALTMASSIAFSAFLALTLTPALCATMLKTIPKGHHEEKKG
                     FFGWFNKKFNSWTHGYEGRVAKVLRKTFRMMVVYIGLAVVGVFLFMRLPTSFLPTEDQ
                     GFVMVSVQLPAGATQERTNATLAQVTQLAKSIPEIENIITVSGFSFSGSGQNMAMGFA
                     ILKDWNERTAPGSDAVAIAGKLTGMMMGTLKDGFGIAVVPPPILELGNGSGLSINLQD
                     RNNTGHTALLAKRNELIQKMRASGLFDPSTVRAGGLEDSPQLKIDINRAAAAAQGISF
                     ADIRTALASALSSSYVSDFPNQGRLQRVMVQADEDARMQPADILNLTVPNKSGVAVPL
                     STIATVSWENGTEQSVRFNGYPSMKLSASPATGVSTGQAMAAVQKMVDELGGGYSFEW
                     GGQSREEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT
                     GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAAL
                     EAARLRFRPIIMTSFAFILGVVPLYIAGGASSASQRAIGTTVFWGMLIGTLLSVFLVP
                     LFYVVVRKFFKETAHEHEMAVKHAAEAGITGSDDSQH"
     gene            complement(4726..5964)
                     /gene="mtrC"
                     /locus_tag="WJJ54_001480"
     CDS             complement(4726..5964)
                     /gene="mtrC"
                     /locus_tag="WJJ54_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit MtrC"
                     /protein_id="HEZ7342333.1"
                     /translation="MAFYAFKAMRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPA
                     PVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQ
                     IDSSTYEANLESARAQLATAQATLAKADADLARYKPLVAAEAVSRQEYDAAVTAKRSA
                     EAGVKAAQAAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNP
                     MYVNVTQSASEVMKLRRQIAEGKLLAADGVIAVGIKFDDGTVYPEKGRLLFADPTVNE
                     STGQITLRAAVPNDQNILMPGLYVRVLMDQVAVDNAFVVPQQAVTRGAKDTVMIVNAQ
                     GGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIVGITGAKKVTPKEWAPSENQA
                     ASPQSSVQTASEAKPASEAK"
BASE COUNT         1358 a         1704 c         1612 g         1345 t
ORIGIN      
        1 aaatgccgtc tgaaacctta tcgtttcaga cggcatttta ttgcccgacc ggttatttgt
       61 cggtttgggt atcccgtttc aatccgccgc cgagtgcctt gtacaaatcg gcaaggtttt
      121 cggcgcgggt cagttgtgcc gacaaagccg caccttccgc cgaatagctg ctgcgttccg
      181 catcgagcaa atcgagcgcg ccggatacgc cgtgcttgta acgcaggccg accaagcgca
      241 acgcttcttt agaggcgcgg ctttgtttgc ttaaagcgtc ataggcttta tccagctgct
      301 cgcgcgccgc caatgcgttt gccacgtctt gaaatgcgga ttggacggcg gattcatagg
      361 caacgatttg tgcctgttgg cgcagcttgg ctacatcaag gttcgccttg ttcgtacccc
      421 aggtaaaaat cggcagggta atagacggcg cgaacgacca aacgcccgtg ccgcttttga
      481 acagcccacc caattcggca gaacccgtac cgacggttcc ggtcaggcgg atggatggga
      541 aaaaggcggc gcgtgccgca ccgatattgg cgtttgcctg tttgagcgcg tgttcggcag
      601 cacggatatc gggacggtcg agcaatactt cggaactcaa accggccggc agcttctcaa
      661 caaaaaactg cttgtccaac ggcaaaccgg cgggcaggtc gtcgggtatc ggttggttaa
      721 tcagggttgc caaggcattg cgcgcctgtt cgcggctgcg cgcggcatgg gcataatcgg
      781 ctttggcaga ttcgattagg gcttcctgct gacgtagggc gacggcggaa atcacgcctg
      841 ccttgtaacg taattcggac agcttgtagg tttcctcgcg cgttttcaaa acacgttgcg
      901 ccaaagacat cgcttcttcg gcgtaacgtt cgttgaaata ggctttggca acggtggcaa
      961 tcaggctcaa atgtgccgca tcgcggttgg cggtgctggc gaaatagcct tgcagtgccg
     1021 cctcgctgct gctgcgtaca cgcccgaaca gatcgagttc gtaagatgcc gcacccagtc
     1081 cgactttgta gctgctgctt acattgccgc cgctcaagct gccttggcgc gagccgttcg
     1141 cattggcggc aagcgtgggc aggaggttgt tgcgctcaat catgtattgt ttgcggtaga
     1201 tttcgctgtt caatacggcg gtacgcaaac tggtattgcg ctcgagtgcg atgtcgatca
     1261 gcttttgcag gcgcgggtcg gcaaaatagt cgtgccaacc caaatcgacg gcgcggatgc
     1321 cgctgtcggc ggtatcgttt ttgaacgttt cggcaacttc gactttgggc tgctcgtatt
     1381 ggggaatcat ggtgcaggcg gataatgcga aggctgctgc aacagaagtc aaggtggttt
     1441 tcaatgtagt atccataaaa aagtcctgat gccgtctgaa aacccgtggg cgttcagacg
     1501 gcatggttgc ttaatgttgg ctgtcgtccg aaccggtgat gcccgcttcg gcagcgtgtt
     1561 ttactgccat ttcgtgttcg tgcgcggttt ctttgaagaa tttgcgcacc accacataga
     1621 aaagcggaac aaggaacacc gacaagagcg tgccgatgag catcccccag aatacggttg
     1681 taccaatggc gcgctggctg gcagaacttg caccgccggc aatatacagg ggaaccacgc
     1741 ccaaaataaa ggcaaacgag gtcatgataa tcggacggaa acgcaggcgg gctgcttcca
     1801 aagcggcttc aaccgcgctt ttcccttgcg cttgaaggtc tttggcaaat tcgataatca
     1861 aaatcgcatt tttcgcactc aaacccatca cggtaacgaa accgacttga aagtagatgt
     1921 cgttggcgaa cgagggaacg ctgcccaaca gtccttcaaa caggttgcgc ccggttacgc
     1981 ccgcagccgc accgatcaaa cccaacggaa tcacaaggat gaccgccagc ggaatcgacc
     2041 agctttcata aagcgcggca agtaccaaaa atacggctgc aaccgccaaa ccgtacaaaa
     2101 tcagggtttg cgagccgcct tttgcctctt cgcgcgactg tccgccccat tcgaagctgt
     2161 aaccgccgcc caattcgtca accatttttt gaaccgccgc catagcctgc ccggtggaaa
     2221 cgccggttgc aggcgaagcg gacagcttca tcgaaggata accgttgaag cgtacgctct
     2281 gttccgtacc gttttcccaa gaaacagtag caatggtgga aagcggtacg gcgacgccgg
     2341 atttgttcgg cacggtcagg ttcaaaatat cggcaggctg catacgggca tcctcgtcgg
     2401 cctgcaccat cacgcgttgc agacggcctt ggttcgggaa gtcgctgaca taagacgaac
     2461 tcagcgcact tgccaatgcg gtgcggatgt cggcaaacga aatgccttgc gccgccgcgg
     2521 cggcacggtt gatgtcgatt ttcaactgcg gcgagtcttc caaaccgcca gcacggacgg
     2581 tgctggggtc aaacaaaccg ctggcacgca ttttctgaat caactcgttg cgcttcgcca
     2641 gcaatgcggt atggccggta ttattgcggt cttgcaggtt gatgctcagg cccgaaccat
     2701 tgcccaactc cagaatcgga ggcgggacga cggcgatgcc aaaaccgtct ttaagcgtcc
     2761 ccatcatcat acccgtcagc ttgccggcaa tcgcaacggc atcgctgccg ggcgcggtac
     2821 gctcgttcca atctttcaat atggcaaaac ccatcgccat attctgaccg ctgcccgaaa
     2881 agctgaagcc ggaaacggta atgatgtttt ctatttcagg aatgcttttc gccagttggg
     2941 taacttgcgc caaagtcgca ttggtgcgct cttgggtcgc tcctgcaggc agttgcacgc
     3001 tgaccatgac gaagccttgg tcttcggtcg gcaggaatga agtcggcagg cgcataaaca
     3061 ggaacacgcc cacaaccgcc aaaccgatat agacaaccat catgcggaaa gtcttacgca
     3121 gcactttggc aacccggcct tcgtaaccgt gcgtccaact attgaatttc ttgttaaacc
     3181 agccgaagaa accttttttc tcttcgtgat gccctttcgg gattgtcttc aacattgtgg
     3241 cacacaaagc aggggtaagg gtcagcgcaa ggaaagcgga gaatgcgatt gatgacgcca
     3301 tcgtcagggc aaactgtttg taaatattgc ccgtcgcccc gctgaacatc gccaacggta
     3361 cgaacacgga aatcagaacg gcggtaatac cgatgaccgc gcccgaaatc tgacccatcg
     3421 cttttttggt cgcttctttg ggcggcaagc cttcacccgc cataatgcgc tcgacgtttt
     3481 caaccaccac aatcgcgtca tcgaccacga tgccgatgac caaaaccatc gcaaacatgg
     3541 tcagtacgtt aatcgacatg cccatataag agatgaaggc gaaaccgccc aacaacgaaa
     3601 tcggtacgac gatggtcgga atcagcgtat aacggatgtt ttgcaggaag agatacatta
     3661 cgacaaacac cagcaccatc gcttcgatta aagtatgaat cactttttca atcgaaattt
     3721 cgacgaattt ggaagtatcg taaggggttt tccagctcat accctgagga aagtattttt
     3781 ccaacgtcgc catgcgttct ttaaccgcct ttgccgtcgc catcgcattg ccgctgttgg
     3841 acagcatcac cgccataccg gtggtattta caccgttcag acgggttgag gaagaatagt
     3901 cttccatacc cagtccgacc cttgccacat ccttcaggta aacattagaa ccgtcggtat
     3961 tggcgcggag gatgacgttg ccgaattctt ctgccgtacc caactgccct tgcgccgtta
     4021 cggtagccgt aaccgtctgt ccgcgaacgg cgggaagcga accgatagaa cccgctgaaa
     4081 tctggacgtt ctgggcggac agcgcgctgc cgatatcggc aaacgacaaa ttgtagtttt
     4141 gcagtttctt aggatcaacc caaatccgca tcgcgcgttg cgcgccgaac aggcgtacct
     4201 gccccacgcc ttcgatacgc tgcaactcgg gaacgatatt acgctgcgcg tagtcgttca
     4261 tctcttcggt tgactgcaca tccgacgaaa gcatcacaat catcaggaaa ttggaacgcg
     4321 ccttggatac ggttacgccg tattgctgga cggttgctgg cagcgtgctc aatacttcgg
     4381 aaagcttgtt ctgcacttcc acctgcgcca ggttctcgtc ggtatcgggc gtaaaggtca
     4441 ggctcacgct gccgctgccg ctcgaatcgg cagaagtgga catataatcc aaaccttcca
     4501 cgccgttcat attccgctcg atcacggaaa gcacgctgtc ttccattacc tgcgcggacg
     4561 cacccggata agtggcgtgc aaagtaatgg tcggggcggc gacggacgga tattgcgaaa
     4621 ccggcaggct tttgatgccg aaaatacccg ccgcaataat gaaaatcgaa ataacccacg
     4681 caaaaatagg gcggtcgata aaaaatttag ccatcgatgc cttccttatt tcgcttcaga
     4741 agcaggtttg gcttcagatg ccgtctgaac gctggattga ggcgaggcgg cttggttttc
     4801 agacggcgcc cattctttag gcgttacctt tttcgcaccc gttatgccga cgatactgat
     4861 gccttccaca accaccttgt ccccgtcctt cagacccgac gtaacaatcc aattcgtacc
     4921 ctgctgttgc gcaaccgtta cctcgcgggg ttccataccg ccttgggcat tcacaatcat
     4981 cacggtatct ttcgcaccgc gcgttaccgc ctgctgcggc acaacaaatg cgttatccac
     5041 cgccacttgg tccatcagca cgcgcacata caggccgggc atcaggatat tctgatcgtt
     5101 cggtacggcg gcgcgcaggg taatctgacc ggtcgattcg ttgacggtcg gatcggcaaa
     5161 cagcaggcgg cctttttcag ggtaaactgt gccgtcgtca aatttgatgc cgaccgcaat
     5221 cacaccatcc gccgccagca gtttgccttc ggctatctga cggcgcaatt tcatcacttc
     5281 ggatgcagac tgggtaacgt tcacatacat cggattggtt tggcggatgg ttgccagcac
     5341 ggtcgtatcg cccgcattca acagcgtacc ttcggaaact ttggactgac cgataaagcc
     5401 ggaaatcggc gcggtaatgc gcgaacggtt cagattgatg ccggcagatt tgatcgccgc
     5461 ctgtgctgct ttgacacctg cctcggcaga acgtttcgcc gttaccgcag catcgtattc
     5521 ctgccggctg acggcttcgg cggcaaccaa aggcttgtat cgcgccaaat ccgcatccgc
     5581 tttggcaagc gttgcctgag ccgttgccag ttgcgcgcgc gcgctttcca gatttgcttc
     5641 ataagtggaa ctgtcgatct gatacagcgg ctgtccggca cggacataac tgccttcttg
     5701 gaacaggcgt ttttggataa tgccgccaac ttgcgcacgg acatcggcgg tacgcagcga
     5761 ttccaaacgt cccggcaact cgacggtcaa cgcaacggtt tgcggatgga cggttacgac
     5821 accgacgacg ggagccggtg cttcccgacc cgcaggctgc ccgccctgcg ccgcgtctcc
     5881 gcctttaccg caagacgaca gtaccaatgc aacggcggca gccaacgcgg ccgcacgcat
     5941 cgccttaaaa gcataaaaag ccattattta tcctatctgt ctggtttgat gtaaagggtt
     6001 ttgccaatca acaggcatt
//
LOCUS       DAWKJW010000116         6015 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.116, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000116 DAWKJW010000000
VERSION     DAWKJW010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6015)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6015)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6015
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.116"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..421)
                     /locus_tag="WJJ54_001481"
     CDS             complement(<1..421)
                     /locus_tag="WJJ54_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HEZ7342334.1"
                     /translation="MLCPEKMSVMAGRHPYGVRSGLRRNGLKLWDIHFRMTRFIVARC
                     GLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAE
                     YRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPA"
     gene            complement(457..570)
                     /gene="rrf"
                     /locus_tag="WJJ54_001482"
     rRNA            complement(457..570)
                     /gene="rrf"
                     /locus_tag="WJJ54_001482"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(667..3558)
                     /locus_tag="WJJ54_001483"
     rRNA            complement(667..3558)
                     /locus_tag="WJJ54_001483"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(3965..4040)
                     /locus_tag="WJJ54_001484"
     tRNA            complement(3965..4040)
                     /locus_tag="WJJ54_001484"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4005..4007),aa:Ala,seq:tgc)
     gene            complement(4046..4122)
                     /locus_tag="WJJ54_001485"
     tRNA            complement(4046..4122)
                     /locus_tag="WJJ54_001485"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4086..4088),aa:Ile,seq:gat)
     gene            complement(4223..5763)
                     /locus_tag="WJJ54_001486"
     rRNA            complement(4223..5763)
                     /locus_tag="WJJ54_001486"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT         1304 a         1763 c         1298 g         1650 t
ORIGIN      
        1 gtgcgggcgc accgaccgaa gcctgatcct tcagcttcgc caacaccgca gggccgatac
       61 cctttacctt ggtcaaatcg tccacagact tgaacgcacc gttttgcgca cggtattccg
      121 caatggcttt cgccttcgca gggcctatgc ccggcagagc ctccaactcc tgctgcgaag
      181 ccgcattgat gtttaccgcc gcaagggaga aggcgcagga gaacagcata cagaacagca
      241 cgaacatttt cttcatggtt tttcctttaa gggttgcaaa caataaaccg catcttgcga
      301 cgataaaacg ggtcattcta aaatgaatat cccaaagttt caagccgttc ctccgcaaac
      361 ccgaccggac gccgtacgga tgccgtcccg ccatcaccga cattttttcc gggcaaagca
      421 aaaacccccg aataatcggg ggttttctga atgggtgttt ggcagtgacc tactttcgca
      481 tggaagaacc acactatcat cggcgctgag tcgtttcacg gtcctgttcg ggatgggaag
      541 gcgtgggacc aactcgctat ggccgccaaa cttaaactgt tacaaatcgg taaagcctta
      601 atcaatatat tcggtaatga ctgaatcagt cagtaagctt ttatctcttg aagttcttca
      661 aatgatagag tcaagcctca cgagcaatta gtatgggtta gcttcacgcg ttaccgcgct
      721 tccacacccc acctatcaac gtcctggtct cgaacgactc tttagtgcgg ttaaaccgca
      781 agggaagtct catcttcagg cgagtttcgc gcttagatgc tttcagcgct tatctcttcc
      841 gaacttagct acccggctat gcaactggcg ttacaaccgg tacaccagag gttcgtccac
      901 tccggtcctc tcgtactagg agcagccccc gtcaaacttc caacgcccac tgcagatagg
      961 gaccaaactg tctcacgacg ttttaaaccc agctcacgta ccactttaaa tggcgaacag
     1021 ccataccctt gggaccgact acagccccag gatgtgatga gccgacatcg aggtgccaaa
     1081 ctccgccgtc gatatgaact cttgggcgga atcagcctgt tatccccgga gtacctttta
     1141 tccgttgagc gatggccctt ccatacagaa ccaccggatc actatgtcct gctttcgcac
     1201 ctgctcgact tgtcggtctc gcagttaagc taccttttgc cattgcacta tcagtccgat
     1261 ttccgaccgg acctaggtaa ccttcgaact cctccgttac gctttgggag gagaccgccc
     1321 cagtcaaact gcctaccatg cacggtcccc gacccggatg acgggtctgg gttagaacct
     1381 caaagacacc agggtggtat ttcaaggacg gctccgcaga gactggcgtc tctgcttcaa
     1441 agcctcccac ctatcctaca caagtgactt caaagtccaa tgcaaagcta cagtaaaggt
     1501 tcacggggtc tttccgtcta gcagcgggta gattgcatct tcacaaccac ttcaacttcg
     1561 ctgagtctca ggaggagaca gtgtggccat cgttacgcca ttcgtgcggg tcggaactta
     1621 cccgacaagg aatttcgcta ccttaggacc gttatagtta cggccgccgt ttactggggc
     1681 ttcgatccga tgctctcaca tcttcaatta accttccagc accgggcagg cgtcacaccc
     1741 tatacgtcca ctttcgtgtt agcagagtgc tgtgttttta ataaacagtc gcagccacct
     1801 attctctgcg accctccggg gcttacggag caagtcctta accttagagg gcataccttc
     1861 tcccgaagtt acggtatcaa tttgccgagt tccttctcct gagttctctc aagcgcctta
     1921 gaattctcat cctgcccacc tgtgtcggtt tgcggtacgg ttcgattcaa actgaagctt
     1981 agtggctttt cctggaagcg tggtatcggt tgcttcgtgt ccgtagacac tcgtcgtcac
     2041 ttctcggtgt taagaagacc cggatttgcc taagtcttcc acctaccggc ttaaacaagc
     2101 tattccaaca gcttgccaac ctaaccttct ccgtccccac atcgcatttg aatcaagtac
     2161 aggaatatta acctgtttcc catcgactac gcatttctgc ctcgccttag gggccgactc
     2221 accctacgcc gatgaacgtt gcgcaggaaa ccttgggctt tcggcgagcg ggcttttcac
     2281 ccgctttatc gctactcatg tcaacattcg cacttctgat acctccagca cactttacaa
     2341 tgcaccttca tcggcctaca gaacgctccc ctaccatgcc ggtaaaccgg catccgcagc
     2401 ttcggttata gatttgagcc ccgttacatc ttccgcgcag gacgactcga ccagtgagct
     2461 attacgcttt ctttaaatga tggctgcttc taagccaaca tcctggctgt ctgggccttc
     2521 ccacttcgtt taccacttaa tctatcattg gggaccttag ctggcggtct gggttgtttc
     2581 cctcttgaca acggacgtta gcacccgctg tctgtctccc gaggaaccac ttgatggtat
     2641 tctgagtttg ccatgggttg gtaagttgca ataaccccct agccataaca gtgctttacc
     2701 cccatcagtg tcttgctcga ggcactacct aaatagtttt cggggagaac cagctatctc
     2761 cgagtttgtt tagcctttca cccctatcca cagctcatcc ccgcattttg caacatgcgt
     2821 gggttcggtc ctccagtacc tgttacggca ccttcaacct ggccatggat agatcactcg
     2881 gtttcgggtc tacacccagc aactattcgc cctattaaga ctcggtttcc ctacgcctcc
     2941 cctattcggt taagctcgct actgaatgta agtcgttgac ccattataca aaaggtacgc
     3001 agtcacacct ctagggcgct cccactgttt gtatgcatca ggtttcaggt tctgtttcac
     3061 tcccctcccg gggttctttt cgcctttccc tcacggtact ggttcactat cggtcgatga
     3121 tgagtattta gccttggagg atggtccccc catattcaga caggatttca cgtgtcccgc
     3181 cctacttttc gtacgcttag taccgctgtt gagatttcga atacgggact gtcacccact
     3241 atggtcaagc ttcccagctt gttcttctat ctcgacagtt attacgtaca ggctcctccg
     3301 cgttcgctcg ccactacttg cggaatctcg gttgatttct tttcctccgg gtacttagat
     3361 ggttcagttc tccgggttcg cttctctaag tctatgtatt caacttagga tactgcacag
     3421 aatgcagtgg gtttccccat tcggacatcg cgggatcatt gctttattgc cagctccccc
     3481 gcgcttttcg caggcttaca cgtccttcgt cgcctatcat cgccaaggca tccacctgat
     3541 gcacttattc acttgactct atcatttcaa gaacttcttt gactttgcct aacattccgt
     3601 tgactagaac atcagacttg aatttcctac tttgataaag cttactgctt tgttgtgtct
     3661 taatcctgcc ttttgtgttt caggattaag tcgatacaat catcacccaa atactgtgtt
     3721 tgttttcttt tctcttgtga gcgatttttt atcctttgca aagaataaaa aatcaaaaca
     3781 aacgctttgt ctttgtttgt tgatttcggc tttccaattt gttaaagatc gatgcgttcg
     3841 atattgctat ctactgtgca aatcaaaacg agctgattat tatatcagca ttttgttctt
     3901 ggtcaagtgt gacgtcgccc tgaatggatt ctgttccatt cttccgtttt gatttgtaca
     3961 gtattggtgg aggcaaacgg gatcgaaccg atgaccccct gcttgcaaag caggtgctct
     4021 accaactgag ctatgccccc gttcttggtg ggtctgggag gacttgaacc tccgacccca
     4081 cgcttatcaa gcgtgtgctc taaccagctg agctacaaac ccggattctc ttcttaagcg
     4141 aatcttgcct tcactcaagc ttcttccgca tcttttcagt ttaccgataa gtgtgaatgc
     4201 ctaaagcctc ttctttctct agaaaggagg tgatccagcc gcaggttccc ctacggctac
     4261 cttgttacga cttcacccca gtcatgaagc ataccgtggt aagcggactc cttgcggtta
     4321 ccctacctac ttctggtatc ccccactccc atggtgtgac gggcggtgtg tacaagaccc
     4381 gggaacgtat tcaccgcagt atgctgacct gcgattacta gcgattccga cttcatgcac
     4441 tcgagttgca gagtgcaatc cggactacga tcggttttgt gagattggct ccgcctcgcg
     4501 gcttggctac cctctgtacc gaccattgta tgacgtgtga agccctggtc ataagggcca
     4561 tgaggacttg acgtcatccc caccttcctc cggcttgtca ccggcagtct cattagagtg
     4621 cccaactgaa tgatggcaac taatgacaag ggttgcgctc gttgcgggac ttaacccaac
     4681 atctcacgac acgagctgac gacagccatg cagcacctgt gttacggctc ccgaaggcac
     4741 tcctccgtct ccggaggatt ccgtacatgt caagaccagg taaggttctt cgcgttgcat
     4801 cgaattaatc cacatcatcc accgcttgtg cgggtccccg tcaattcctt tgagttttaa
     4861 tcttgcgacc gtactcccca ggcggtcaat ttcacgcgtt agctacgcta ctaagcaatc
     4921 aagttgccca acagctaatt gacatcgttt agggcgtgga ctaccagggt atctaatcct
     4981 gtttgctacc cacgctttcg ggcatgaacg tcagtgttgt cccaggaggc tgccttcgcc
     5041 atcggtattc ctccacatct ctacgcattt cactgctaca cgtggaattc tacctccctc
     5101 tgacacactc gagtcaccca gttcagaacg cagttcccgg gttgagcccg gggatttcac
     5161 atcctgctta agtaaccgtc tgcgcccgct ttacgcccag taattccgat taacgctcgc
     5221 accctacgta ttaccgcggc tgctggcacg tagttagccg gtgcttattc ttcaggtacc
     5281 gtcatcagcc gctggtatta gcaacagcct tttcttccct gacaaaagtc ctttacaacc
     5341 cgaaggcctt cttcagacac gcggcatggc tggatcaggc ttgcgcccat tgtccaaaat
     5401 tccccactgc tgcctcccgt aggagtctgg gccgtgtctc agtcccagtg tggcggatca
     5461 tcctctcaga cccgctactg atcgtcgcct tggtaggcct ttaccccacc aactagctaa
     5521 tcagatatcg gccgctcgaa tagcgcaagg cccgaaagtc ccctgctttc tctctcaaga
     5581 cgtatgcggt attagctgat ctttcgatca gttatccccc actactcggt acgttccgat
     5641 atgttactca cccgttcgcc actcgccacc cgagaagcaa gcttctctgt gctgccgtcc
     5701 gacttgcatg tgtaaagcat gccgccagcg ttcaatctga gccaggatca aactcttatg
     5761 ttcaatctct aactttttaa cttctggtct gcttcaaaga aaccaacagg acaatgttca
     5821 aaacattatc ttgtctgtct ttcaaacagt gtgaggctca aggcactcac acttatcggt
     5881 aatctgtttt gttaaagagc gttgcgaatt ataaagtatc tcttccgcct gtcaagatat
     5941 ctctcgatat ccccaacatt ctgtgctata cttttcagtt cgcccgccgc ttctgcagca
     6001 gcgaagaacc gaact
//
LOCUS       DAWKJW010000117         6002 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.117, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000117 DAWKJW010000000
VERSION     DAWKJW010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6002
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.117"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(53..361)
                     /locus_tag="WJJ54_001487"
     CDS             complement(53..361)
                     /locus_tag="WJJ54_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342335.1"
                     /translation="MTNNVDLKVPAKRYFTLDELCGLLQISPYGFAQWQHDHGVVVGY
                     GGERYTRLDVVKLLKLQSTFAPYAEGAESGSDGNRPVTLQEIGDGLKELLADLDKELC
                     "
     gene            complement(345..647)
                     /locus_tag="WJJ54_001488"
     CDS             complement(345..647)
                     /locus_tag="WJJ54_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HEZ7342336.1"
                     /translation="MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEE
                     IKISGFGNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKSMVEHYYDKQR"
     gene            complement(721..3084)
                     /locus_tag="WJJ54_001489"
     CDS             complement(721..3084)
                     /locus_tag="WJJ54_001489"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEZ7342337.1"
                     /translation="MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFTG
                     VVIAEVKSVEKHPDADRLNVTQVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLPGN
                     FKIKPTKMRGVVSDGMLCSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFT
                     LKITPNRADCLSVKGIAREVSALTGCAFRQPEIHTAPITGSRKQPVQINAPADCGRFI
                     SRVIENVNAKAATPDWMKQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGS
                     LHIRRVREGETLECLNEKTVSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVL
                     EAAWFAPEIIAGKSRQYGFGSDSSFRFERGVDYRLQADAMERATELVLQICGGAAGEM
                     VEAQGKLPEAKQVGLRLDRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSF
                     RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMLELPETRRSRFAVYNEMAAHGYRE
                     VVSYAFVDEQWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRV
                     RVFEIARVFGKGSDGRFVQNERIGGLWYGAAMPEQWGGKTRNADFYDIKADVENLLKN
                     KAVEFVKTGHPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLPQAPLVFEIDMAAV
                     LECGKTRYRVVSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGT
                     GLPEGMKSVAVKVILQDMENTLTDEAVEPLIGKLIGAATAAGARLRS"
     gene            complement(3120..3638)
                     /locus_tag="WJJ54_001490"
     CDS             complement(3120..3638)
                     /locus_tag="WJJ54_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342338.1"
                     /translation="MSEIINLTESGITFNLVKNNLFYIEPYIRKRRQEGIKTVEFIYL
                     QEDNLLFVEAKQSIPNQERSPERFDEYISEIYQKWCNALNVEILGILGREDIKETIMP
                     SAFSNLQWGSIEIKLLLVIPDVPLNYLGQLNELIKQEFNKKDTLRLISLWNISVEVIN
                     RDLAIQKGLASS"
     gene            complement(3645..4709)
                     /locus_tag="WJJ54_001491"
     CDS             complement(3645..4709)
                     /locus_tag="WJJ54_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ7342339.1"
                     /translation="MIKSFWLENFGPISLLKADNLGKINLIIAENSKGKTFILKALYS
                     VLKSHEEAHKGKNIRDFSEELRDKLYWTFQVEEIGDLVTRGKENPNERPLKLSMTLED
                     SSSVLFSFGRTTKKLIKPELYELSPRINANSIFLPPKEVLSLFDVIKKSEEEKRFGFD
                     ATYIDLVKALDIKPTKGRNYPEAAEARKDLEALFGGYVSYNDKKKAWVYEKDRQTFSI
                     NSTAEGVKKIGILDTLLGNRFLSPGSILFIDEPEANLHPKAINQFLEILFSLSKSKLG
                     IQIFMSTHSYFVIKKLCLLARKHSESIPVFMPGKEKEQTTWVQENLQNSMPDNEIIGE
                     SIRLFREEIGVLSPETAWIG"
     gene            complement(4886..5878)
                     /gene="pheS"
                     /locus_tag="WJJ54_001492"
     CDS             complement(4886..5878)
                     /gene="pheS"
                     /locus_tag="WJJ54_001492"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEZ7342340.1"
                     /translation="MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKT
                     LGQMSPEERKTIGAHINECKNRFQTAFNAKRDALNEAKLQARLAAEALDITLPGRAQE
                     GGSLHPVTLTLQRVVELFHGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYV
                     ENGDVLRTHTSPIQIRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEG
                     VTFADLKAVFTDFIRRFFERDDLQVRFRPSFFPFTEPSAEIDIMGENGKWLEVGGCGM
                     VHPNVLRNVNIDPEKYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFVK"
BASE COUNT         1521 a         1540 c         1268 g         1673 t
ORIGIN      
        1 attttttagc gtgtaaaaca aaaccggctg catacctgca accggcctca aatcagcaca
       61 attccttatc caaatccgcc aacagctctt tcagaccgtc tccgatttcc tgaagcgtaa
      121 ccggacggtt gccgtccgaa cccgactccg caccttctgc atacggtgca aacgtgctct
      181 gcaatttcaa cagtttcacc acatccaaac gggtgtagcg ttcgccgccg taaccgacaa
      241 ccacaccgtg atcatgctgc cattgcgcaa aaccataggg gctgatttgc aacagtccgc
      301 acaactcgtc cagcgtgaaa tagcgttttg cgggaacctt caaatcaacg ttgtttgtca
      361 tagtagtgtt ccaccatgct tttgagtttc tggctggcat ggaaagttac cacgcggcgg
      421 gcggtaatcg gcacttcctc gccggtttta ggattacgac ccgggcgttg cggcttgtcg
      481 cgcaactgga aatttccgaa accggaaatt ttgatttctt cgccgcttgc caaagtgctg
      541 cggatttctt caaaaaagag ttcgacgatt tctttggcat cgtttttggt gacgttgctg
      601 actttgtcta ccaaaatatc ggccagttct gctttagtga gagtcatatg attaccttct
      661 gttgtaacag ttgtggatta ttaccaattt ttatttaaaa ttcaagcgaa tatttatttt
      721 ttaactgcga agccgcgccc ctgccgccgt tgccgcgcca atcagttttc cgataagcgg
      781 ctcgactgcc tcatccgtca gcgtgttttc catatcctgc aaaatcactt tgaccgccac
      841 gctcttcatc ccttcgggca gtcccgtgcc gcgatacacg tcaaacacgc tgatttcctg
      901 taccaacttg tttgccgcgc ctttcaagac aagcagcaaa tcatcatggc tcatagcttc
      961 cggcatcaca aacgccaaat cgcggcgcac cggctggaat ttcgatacga cccgatagcg
     1021 cgttttcccg cattccaaca cggccgccat atcgatttca aataccagcg gcgcttgcgg
     1081 caggtcgtat ttttgcagcc atttcggatg cagttcgccg acaaagccga tgactttgcc
     1141 gtctgaaacg atattggcgg cacgtccggg atgcagggcg ggatgtccgg ttttaacgaa
     1201 ctcgactgct ttgtttttca acagattttc cacatctgcc ttaatgtcgt aaaaatccgc
     1261 attgcgcgtt ttcccacccc attgttcggg cattgccgcg ccgtaccaca gaccgccgat
     1321 gcgttcgttt tggacaaacc ggccgtctga acctttgccg aacacgcggg cgatttcaaa
     1381 cacgcgcacg cggttttgtt tgcggttcag gttgttttgc aaaatttcca ccaagccgcc
     1441 gatgagtgtg gaacgcatca cggcatattg cgccgccagc gggttttgca ggcggatggg
     1501 gtcggcgttg gcggcaaaat cttgttccca ctgctcgtca acgaaggcat agctgaccac
     1561 ttcgcggtag ccgtgcgccg ccatttcgtt gtaaacggca aaacgcgagc ggcgtgtttc
     1621 gggcagttcc agcattttca gacggcctga cgtgtaatcg tcggggatgt tttcatagcc
     1681 gtaaacgcgt ccgatttctt caatcaaatc ggcctcaatt tcgatgtcaa aacggaagct
     1741 cggcgcggta acgcggaagc cttccgccgt tttctcgggc tgcaggccca agtgttgcaa
     1801 aatggtttcc acctgttcgg caggaatgtc cacgcccaac acggttttca gacggtccaa
     1861 acgcagtccg acctgcttgg cttcgggcaa tttaccttgt gcttcaacca tctcgcctgc
     1921 cgcaccaccg caaatctgca acaccaattc ggtagcacgt tccatggcat ccgcctgcaa
     1981 acggtaatcc acgccgcgct cgaagcggaa cgacgaatcc gaaccgaaac cgtattggcg
     2041 cgatttgccg gcgatgattt cgggcgcaaa ccaagccgct tccagcacga tattttgcgt
     2101 gccgtctgaa accgcgctcg ccgcgccgcc cattaagccc gccaaactca acacgccttt
     2161 ttcgtccgcc acgaccagcg tgttttcaga cagggaaacg gttttctcgt tcaggcattc
     2221 cagcgtttcc ccttcgcgca cgcggcggat gtgcaggctg ccggaaagtt tgtcggcatc
     2281 aaaaacgtgc atcggctgac cgatttccag catcacataa ttgccgatgt ccaccagcgc
     2341 ggaaatactg cggatgccgc tgcgctccaa acgttgtttc atccaatcgg gagtagccgc
     2401 tttcgcattg acattttcaa taacgcggct gataaaacgg ccgcaatcgg caggcgcgtt
     2461 aatctgcacg ggctgttttc gactgcccgt gatcggcgcg gtatggattt cgggctgcct
     2521 gaacgcgcac cccgtcaatg cggacacttc gcgcgcaatg cccttaacac tcaagcaatc
     2581 agcgcggtta ggcgtaattt tcaacgtaaa cagcgtatcg tccaaatcca agtattcacg
     2641 gatattggta ccgacgggcg cgtcttcagg cagaatgtgc aggccgttca caccgtcgtc
     2701 gggcagaccg agttcgtcgg tggaacacaa catcccgtcc gacaccacgc cgcgcatttt
     2761 ggtcggcttg attttgaaat tacccggcaa aacggcaccc ggcagcgaac acggcacttt
     2821 gatgcccgct ttcacattcg gcgcaccgca cacgatctga accaacccac ccgtacccgc
     2881 atcgacttgg gtaacgttca aacggtcggc atcaggatgt ttttcaacgg atttcacttc
     2941 ggcaattacc acacccgtaa acgcaggcgc ggcagtctcg gcttcttcca cttccaagcc
     3001 ggacatggtt aacagatgtt ccagcttatc ggaggaaagt tcggtatcgg cttgggtttt
     3061 cagccatgag taggagaatt gcatgttatg ttctcaatta actaattaac tttagatttt
     3121 caagagctag ctaaaccttt ttgaatggct aagtccctat taattacttc tacagaaatg
     3181 ttccataaag aaatcaaccg caaagtatct ttcttattaa attcttgctt tattaattca
     3241 ttcaattgcc caagataatt aagcggcaca tccgggataa ccagtaataa tttgatttct
     3301 atgctacccc attgcaaatt tgaaaaagca ctaggcataa ttgtttcttt gatatcttct
     3361 ctgcctaata ttcccaaaat ttcaacattt aatgcattac accatttttg ataaatctct
     3421 gaaatatatt catcaaaacg ctcaggagat ctttcttgat ttggaatact ttgttttgcc
     3481 tcaacaaata acaaattatc ttcttgcaga tagataaact ctactgtctt aataccttct
     3541 tgccttctct tccggatata tggttctata taaaacaggt tattttttac tagattaaaa
     3601 gttatacctg attcagtgag atttattatt tcactcataa aaacctaacc aatccatgct
     3661 gtttccggag ataaaacacc tatttcttct ctgaacaatc gaatagactc accaataatt
     3721 tcattatccg gcatgctatt ttgtaaattt tcctgcaccc aagtagtctg ttccttttct
     3781 ttgccaggca taaaaacagg aatactttca ctatgctttc tagctaataa acacagcttc
     3841 ttgataacaa aatatgaatg cgtactcata aaaatctgta ttcccaattt ggatttagat
     3901 aaggaaaaca gaatttctag aaattgatta attgctttcg gatgtagatt agcttctggc
     3961 tcatcaataa ataagattga tccaggactc aaaaaccgat ttcctaatag agtgtctaat
     4021 atcccaatct tttttacccc ctctgctgta gaattgatag agaaagtttg tctatctttt
     4081 tcatataccc atgccttctt tttatcattg tagctaacat aaccgccaaa caatgcttct
     4141 agatcctttc tagcttccgc tgcctcaggg taattcctcc cttttgttgg tttaatatcc
     4201 aatgctttta ccaaatcaat gtaagtagca tcaaaaccaa atctcttttc ttcctctgat
     4261 tttttaatta catcaaatag tgatagaact tctttgggtg gtaaaaaaat agagttagcg
     4321 tttattctgg gagaaagttc gtatagctcc ggtttaatta gctttttggt agttctacca
     4381 aaagaaaaca aaactgaaga actatcttct aaagtcatac ttaacttaag aggccgttcg
     4441 tttggatttt cttttcctct tgtaactaaa tcaccaattt cctctacttg gaacgtccaa
     4501 tatagcttat ctcgcaattc ctcagaaaaa tcacgaatat tctttccttt atgagcttcc
     4561 tcatgacttt ttaaaacact atataatgcc tttaaaataa aagttttccc tttgctattt
     4621 tctgcaataa ttaaatttat tttccctaaa ttatcagcct tcaataagct aatcggcccg
     4681 aaattttcaa gccaaaatga tttaatcata taatccccct aatatatatc aacaatattt
     4741 gtacaagaca cattgtgaaa agacagcaac cacagcacca tagtaaacgc atagcaggcg
     4801 gataatggag cgacatagcg tttcatgatt tagctttctg aggtaggcac aggctgcttt
     4861 tttcattttt aggcagccta cacaatcatt ttacaaactg cttcaaaaaa ttcaaatcgt
     4921 tatcaaaaaa caagcgcaaa tcgttcacgt tgtaacgcag catcgcgaaa cggtcgagac
     4981 cgataccgaa agcgaaaccg gtgtattttt cgggatcgat attcacattt ctcaacacgt
     5041 tgggatgcac cataccgcag ccgccgactt ccagccattt gccgttttcg cccataatgt
     5101 cgatttcggc agacggttcg gtgaacggga agaaagacgg gcggaaacgt acttgcaaat
     5161 catcgcgttc aaagaagcga cggataaaat ccgtgaacac tgcttttaag tcggcaaaag
     5221 ttacgccctc ttctacccac aaaccttccg cctgatggaa cataggcgag tgcgtggcat
     5281 cgctgtccac acggtaaacg cggccggggg cgataatgcg gatgggcggc tcttttttat
     5341 cgagcatata gcggatttga atcggggaag tgtgcgtacg caaaacatca ccgttttcaa
     5401 cgtaaaacgt atcctgcatc gcacgggcag gatggtttgc agggatgttc agggcttgga
     5461 aattgtgaaa atcgtcttcg atttcaggcc cgtccgccac ttcgaaaccc attccgtgaa
     5521 agagttcgac cacacgttgc aaggtcaggg ttacgggatg caggctgccg ccttcctgag
     5581 cgcgtccggg cagggtaatg tcgagggctt cggcggcaag tcgggcttgc agcttggctt
     5641 cgttgagggc atcgcgtttg gcattaaaag ccgtctgaaa ccggtttttg cattcattga
     5701 tatgcgcacc tatggttttg cgctcttcag gcgacatttg ccccaaagtt ttcagaagtc
     5761 cggtcaactc gccggttttg ccaagataac gggctttgat ttgttctaga gcgttgaagt
     5821 cttgcgcagc ttctactgcg gcaatgcctt ctgcaacgat gcggtttaca ttttccataa
     5881 tatcaagtct gtcaattaat gatatgccac ctgaaacaac gaggccgcct gtatagcctg
     5941 acatatcaga ctcttcagac gaccttattt tcttcacggt caatccattg gataaatttt
     6001 ct
//
LOCUS       DAWKJW010000118         5991 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.118, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000118 DAWKJW010000000
VERSION     DAWKJW010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5991)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5991)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5991
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.118"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            164..1276
                     /gene="nadA"
                     /locus_tag="WJJ54_001493"
     CDS             164..1276
                     /gene="nadA"
                     /locus_tag="WJJ54_001493"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HEZ7342341.1"
                     /translation="MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDRETAGRL
                     KDEIKALLKEKNAVLVAHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEAGTLVVAG
                     VRFMGESAKILCPEKTVLMPDLEAECSLDLGCPEEAFSAFCDQHPDRTVVVYANTSAA
                     VKARADWVVTSSVALEIVSYLKSRGEKLIWGPDRHLGDYIRRETGADMLLWQGSCIVH
                     NEFKGQELAALKTEHLDAVVLVHPESPQSVIELGDVVGSTSKLLKAAVSRPEKKFIVA
                     TDLGILHEMQKQAPDKQFIAAPTAGNGGSCKSCAFCPWMAMNSLGGIKYALTSGRNEI
                     LLDRKLGEAAKLPLQRMLDFAAGLKKKDVFNGMGPA"
     gene            1328..2836
                     /gene="nadB"
                     /locus_tag="WJJ54_001494"
     CDS             1328..2836
                     /gene="nadB"
                     /locus_tag="WJJ54_001494"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HEZ7342342.1"
                     /translation="MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASRH
                     AQGGIAAAWSGEDDIEKHVADTLEAGAGLCDEAAVRTILSQGKPAIEWLLAQGVAFDQ
                     NNNDLHLTREGGHTCRRIAHVADYTGEAVMQNLIAQIHRRPNIRVCERQMALDIQTES
                     SAACGLTVLNCRTQETYRIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCT
                     VENLEFIQFHPTGLARPSENGRTFLISEAVRGEGGILSNQAGERFMPHYDRRAELAPR
                     DIVARAIAAEIAKQTQDFVSLDISRQPAEFVRQHFPSIHRYCLSQCGLDITRQAIPVR
                     PVQHYTCGGIQTDPSGRTSLPQLYALGETACTGLHGANRLASNSLLECVVTARLAAQT
                     IADGQAFQAVPPQRPSESLSSEAGIFSDGIQSAFSRPVLQAFNQRHLGILRNDTGLRR
                     AIAQLQLWKQNQTEPHTASEYENRNLLECSLAVAQAAYARRQNIGAHFNSDC"
     gene            complement(3012..3677)
                     /gene="pgmB"
                     /locus_tag="WJJ54_001495"
     CDS             complement(3012..3677)
                     /gene="pgmB"
                     /locus_tag="WJJ54_001495"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HEZ7342343.1"
                     /translation="MTFTAVLFDLDGVITDTAEYHYRAWKKLAEELGIGIDRKFNEQL
                     KGVSRDDSLKRILAHGGKTVGEAEFAELTRHKNDNYVEMIQAVKPEDVYPGILPLLEA
                     LRANGKKIALASASKNGPFLLERMGLTHFFDAIADPAAVAHSKPAPDIFLAAAEGVGA
                     DIRRCIGIEDAAAGVAAIKAAGALPVGVGKAEDLGSDIALVSDTAGLTYAYLQNVWAQ
                     SGR"
     gene            complement(3690..5948)
                     /locus_tag="WJJ54_001496"
     CDS             complement(3690..5948)
                     /locus_tag="WJJ54_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HEZ7342344.1"
                     /translation="MYTRIMEISPWTLRSAKLEKEHKRLQESLTSLGNGYMGMRGSFE
                     ETYSADSHLGTYIAGVWFPDKTRVGWWKNGYPKYFGKAINALNFSKVKIFVDGQEVDL
                     AKNDVAGFSVELDMQHGVLRRSFTVFGVRFDVCKFLSVAQKELALIRWEAVSVDGKTH
                     QIRIDSIIDADVKNEDSNYEEKFWQVLDKGVSDGLSYIAAQTVANPFGVEQFIVNAEQ
                     TFAGSFKALGGSQTDWQVSNSFEAEVGGTPETFEKRVIVTTSRDYQGLEAVKAAGRAL
                     SEKIAGVAFETLLDAHKAGWLHRWEIADVVIEGSDEAQQGIRFNLFQLFSTYYGEDAR
                     LNIGPKGFTGEKYGGATYWDTEAYAVPLYLALAEPEVTRNLLQYRRNQLPQAQHNARE
                     QGLAGALYPMVTFTGIECHNEWEITFEEIHRNGAIPYAIYNYTNYTGDESYLAKEGLE
                     VLVEVSRFWADRVHFSKRNGKYMIHGVTGPNEYENNINNNWYTNTLAAWVLDYTREAL
                     AKYPRPDLNVSAAELEKWADISANMYRPHDEELGVFVQHDGFLDKDIRPVSALSPDDL
                     PLNQKWSWDKILRSPFIKQADVLQGIYFFGDRFNIDEKRRNFDFYEPITVHESSLSPC
                     IHAILAAELGKEEKAVEMYQRTARLDLDNYNNDTEDGLHITSMTGSWLAIVQGFAQMK
                     TWGGKLSFAPFLPSAWTGYAFHINYRGRLIKVAVGKENVVFTLLKGEPLDLQVYGKDI
                     TLNGSHTAALEK"
BASE COUNT         1251 a         1676 c         1743 g         1321 t
ORIGIN      
        1 ccaaagcggt ttgtcggaac gaagcgggtc ggttttacgg tatcgcaaac ctgttttcag
       61 acgaccttgc atattatact caagttgagc ataatgtaaa aacagtttga aaaacagacg
      121 gcaaaccttc atgccgtctg aaaaccagct acaaggaaac atcatgcaaa ccgccgcccg
      181 ccgctcgttc gactacgata tgcccctcat ccaaacgccg acttccgcct gccaaatccg
      241 tcaggcgtgg gcgaaggttg ccgacacgcc cgaccgcgag acggcaggtc gtctgaaaga
      301 cgaaatcaag gccttgctga aggagaaaaa cgcggttttg gtggcgcatt attacgttga
      361 tccgctgatt caagatttgg ctttggaaac gggcggatgc gtgggcgatt cgttggagat
      421 ggcgcgtttt ggcgcggaac acgaagccgg tacattggtg gtggcgggtg tgcgattcat
      481 gggcgagagc gcgaaaatcc tctgccctga aaaaacggtg ctgatgcctg atttggaggc
      541 ggaatgttct ttggatttgg gttgcccgga agaagcgttt tcagcgtttt gcgaccaaca
      601 ccccgaccgc acggtggtgg tgtacgccaa cacttccgcc gccgtgaaag cgcgtgccga
      661 ttgggtggta acgtcttcgg tggcgttgga aatcgtgtcg tatctgaaat cgcgcggcga
      721 gaaactgatt tggggacccg accgccacct cggcgactac atccgccgcg aaacgggcgc
      781 ggatatgctg ttgtggcagg gttcgtgcat cgtccacaac gaattcaaag ggcaggagct
      841 ggcggcgttg aagacggaac acctcgacgc ggtggtgctg gttcatcccg aatcgccgca
      901 aagcgtcatc gaactgggcg acgtggtcgg ctcgaccagc aaactgctca aagccgccgt
      961 atcgcgtcct gaaaaaaaat tcatcgtggc gaccgatttg ggcatcctgc acgaaatgca
     1021 aaagcaggcg cccgacaaac aatttatcgc cgcgccgacg gcgggcaacg gtggaagctg
     1081 caaaagctgc gcgttctgcc cgtggatggc gatgaattcg ctgggcggca tcaaatacgc
     1141 cctgacaagc ggacgcaacg aaatcctgtt ggacagaaag ctgggcgaag ccgccaaact
     1201 gcctttgcag cgtatgctcg atttcgcggc agggctgaag aaaaaagatg tgttcaacgg
     1261 catgggcccc gcctgatttg ccgtccatat tgccgtttca gacgacctct caaacaagga
     1321 caacaccatg caaaccgatt gcgacgtatt gattgccgga aacgggctgg cggcactgac
     1381 gctcgccctg tcgctgcctg aatcgttccg catcgtcatt ttgtgcaaaa accggctgga
     1441 cgacaccgcc agccgtcatg cgcaaggcgg gattgcggcg gcgtggtcgg gagaggacga
     1501 catcgaaaaa cacgttgccg ataccttgga agcgggcgcg ggcttgtgcg acgaagccgc
     1561 cgtccgcacc atcctgtcgc agggcaaacc ggcaatcgaa tggctgcttg cgcaaggcgt
     1621 ggcgttcgac caaaataata acgacctgca cctgacgcgc gaaggtgggc acacttgccg
     1681 ccgaatcgcc cacgtcgccg actacacggg cgaagccgtc atgcaaaacc taattgccca
     1741 aatacaccgc cgcccgaaca tccgcgtttg cgagcggcag atggcgttgg acattcaaac
     1801 cgaatcaagc gcggcgtgcg gactgaccgt cctcaactgc cgaacgcaag aaacctaccg
     1861 catccgcgcc cgccataccg tactcgcagg cggcggcctc gggcaaattt acgccgccac
     1921 cactacgccg cccgaatgca cgggcgacgc catcgccatg gcgatacgcg caggttgtac
     1981 agtcgaaaac ctcgaattta tccaattcca ccccacaggc ttggcaaggc cgtctgaaaa
     2041 cggacgcacc tttctgattt ccgaagccgt gcgcggcgaa ggcggcatcc tgagtaacca
     2101 agcaggcgag cggtttatgc cgcattacga ccgccgcgcc gaactcgcgc cgcgcgacat
     2161 cgttgcccgc gccatcgctg ccgaaatcgc caaacaaacg caagacttcg tctcgctcga
     2221 catcagccgc caacccgcag agttcgtccg tcagcatttc ccatccatcc atcggtactg
     2281 cctgtcccaa tgcggcttgg acattacgcg ccaagccatc cccgtccgcc ccgtacaaca
     2341 ctacacctgc ggcggaatcc aaaccgaccc cagcggcaga acctccctgc cacaactcta
     2401 cgccttaggc gaaaccgcct gcacagggct gcacggagcc aaccgcctcg ccagcaactc
     2461 cctgctcgaa tgcgtcgtta ccgctcggct tgccgcccaa accatcgcgg acgggcaagc
     2521 gttccaagcc gtaccgcccc aaaggccgtc tgaaagcctc tcctccgaag caggcatctt
     2581 ttcagacggc atccaaagcg cattcagccg ccccgtcctg caagccttca accaacgcca
     2641 tctgggcatc ctacgcaacg ataccggcct gcgccgcgcc attgcccaac tgcagctttg
     2701 gaagcaaaac caaaccgagc cgcacaccgc gtccgaatac gaaaaccgta acctgctcga
     2761 atgcagcctc gccgtcgccc aagccgcata cgcaaggcgg caaaacatcg gcgcgcattt
     2821 taatagtgat tgttaaggtt ggcaggtcag agaaaatcgt tcaaataaat ttgaatagca
     2881 tggttaagaa attggcattc ggtttttagg gttgcgtaag tttggttatc attctgttct
     2941 aaaagcaaaa aggccgtctg aaacactgtt cagacggtct tttgcttcct tgacacttta
     3001 tctgacgcgt tttacctgcc cgactgtgcc cacacgtttt gcaggtaggc gtaggtcagc
     3061 ccggcggtgt cggacaccag cgcgatgtcg ctgcccaagt cttcggcttt gcccacgccg
     3121 acaggcaagg caccggcggc tttgatggcg gctactcctg ccgctgcgtc ttcgatgccg
     3181 atgcagcggc ggatgtccgc acccacgccc tcggctgcgg cgaggaagat gtcgggggcg
     3241 ggtttggaat gtgcgacggc ggcagggtcg gcaatggcgt cgaagaagtg ggtcagcccc
     3301 atgcgttcca gcaggaacgg gccgttttta ctggcggatg caagggcgat ttttttgccg
     3361 tttgccctca atgcttccag caggggcaaa atgccgggat acacgtcttc gggtttgact
     3421 gcctgaatca tctcgacgta gttgtcgttt ttgtggcggg tcagttcggc aaactcggct
     3481 tcgccgacgg ttttgccgcc gtgcgcgagg atgcgtttga gcgaatcgtc gcgcgacacg
     3541 cctttaagct gctcgttaaa cttgcggtcg atgccgatgc ccagttcttc agcgagtttt
     3601 ttccatgcgc ggtagtggta ttcggcggtg tcggtgatga cgccgtcgag atcgaagagc
     3661 actgcggtaa aagtcatttt tcgccctcct tatttttcca acgcggcggt gtggctgccg
     3721 ttgagcgtga tgtctttgcc gtacacctgc aaatcgagcg gttcgccttt gagcagggtg
     3781 aagacgacgt tttctttgcc gacggcgact ttaatcagac ggccgcggta gttgatgtgg
     3841 aaggcgtagc ctgtccacgc actcggcagg aacggtgcga agctgagttt accgccccaa
     3901 gttttcattt gggcgaaacc ttggacgatg gcgagccacg agccggtcat ggaggtgatg
     3961 tgcaggccgt cttcggtgtc gttgttgtag ttgtccaagt ccaggcgggc ggtgcgctgg
     4021 tacatttcca cggctttttc ttctttgccc agttcagcgg caaggatggc gtggatacac
     4081 ggcgacaacg agctttcatg cacggtaatc ggttcgtaga agtcgaagtt gcggcgtttt
     4141 tcgtcgatat tgaaacggtc gccgaagaaa tagatgcctt gcaagacatc cgcctgtttg
     4201 atgaagggcg aacgcaggat tttgtcccac gaccatttct ggttgagcgg caaatcgtcg
     4261 ggcgaaagcg cggacacggg gcggatgtct ttgtcgagga atccgtcgtg ttgtacgaat
     4321 acgccgagtt cttcgtcatg cggacggtac atattcgcgc tgatgtccgc ccatttttcc
     4381 aactcggcgg cgctcacgtt caaatccgga cgcgggtatt tcgccagggc ttcgcgggtg
     4441 tagtctaata cccatgcggc gagggtgttg gtgtaccagt tgttgttgat gttgttttcg
     4501 tattcgttcg ggccggttac gccgtgaatc atgtatttgc cgttgcgttt ggaaaagtgg
     4561 acgcggtccg cccagaagcg ggacacttcg accaagactt ccaagccttc tttggcaaga
     4621 tagctttcgt cgccggtgta gttggtgtag ttgtagatgg cgtaaggaat cgcgccgttg
     4681 cggtggattt cctcgaaggt gatttcccat tcgttgtggc actcgatgcc cgtaaacgtt
     4741 accatcggat agagtgcgcc cgccaagccc tgttcgcgcg cgttgtgttg cgcctgcggc
     4801 agttggttgc ggcggtattg cagcaggttg cgggtaactt cgggttcggc cagtgcgaga
     4861 tagagcggca ctgcgtaggc ttcggtgtcc caataggtcg cgccgccgta tttttcgccg
     4921 gtaaagcctt tcgggccgat gttcaggcgc gcgtcttcgc cgtagtaggt ggagaacagt
     4981 tggaacaggt tgaagcggat gccctgctgc gcttcgtcgc tgccttcgat gaccacgtcg
     5041 gcgatttccc aacggtgcaa ccagcccgct ttgtgcgcgt ccagcaaggt ttcaaacgca
     5101 acgcctgcga ttttttccga caaggcgcgg cctgcggctt tcacggcttc caagccctga
     5161 taatcgcggc tggtggtaac aataacccgt ttttcaaagg tttcgggcgt gccgccgact
     5221 tcggcctcga aagaattgga aacttgccaa tcggtttggc tgccgccgag ggctttaaag
     5281 ctgccggcaa aagtttgctc ggcattgaca atgaattgtt ccacgccgaa aggattggca
     5341 acggtttggg cggcaatgta ggagaggccg tctgaaacgc ctttgtccaa tacctgccag
     5401 aatttttctt cgtagttgga gtcttcgttt ttcacgtcgg cgtcgatgat ggaatcgatg
     5461 cggatttggt gggttttgcc gtcaacggac acggcttccc agcggatgag agccagctct
     5521 ttttgtgcga cggacaggaa tttgcacaca tcgaaacgca cgccgaatac ggtgaacgag
     5581 cggcgcaaca cgccgtgctg catatcgagt tcgacggaga agccggcaac atcgtttttc
     5641 gccaagtcca cctcttgacc atcgacaaag attttgactt tgctgaaatt gagcgcgttg
     5701 atggctttgc cgaaatattt gggatagccg tttttccacc agccgacgcg ggttttgtcg
     5761 gggaaccaca cgccggcgat gtaggtgccc aagtggctgt cggcggagta ggtttcctca
     5821 aagctgccgc gcatacccat atagccgttg cccaaactgg tcaggctctc ttgcagccgt
     5881 ttgtgttctt tttccagttt tgccgaacgc agcgtccaag ggctgatttc cataattctt
     5941 gtgtacattt atgaagctcc tgtttggatt gatttgaggg aatggtgaaa t
//
LOCUS       DAWKJW010000119         5983 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.119, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000119 DAWKJW010000000
VERSION     DAWKJW010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5983)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5983)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5983
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.119"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            55..1593
                     /gene="murJ"
                     /locus_tag="WJJ54_001497"
     CDS             55..1593
                     /gene="murJ"
                     /locus_tag="WJJ54_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEZ7342345.1"
                     /translation="MNMLGALAKVGSLTMVSRVLGFVRDTVIARAFGAGMATDAFFVA
                     FKLPNLLRRVFAEGAFAQAFVPILAEYKETRSKEATEAFIRHVAGMLSFVLVIVTALG
                     ILAAPWVIYVSAPGFAKDADKFQLSIDLLRITFPYILLISLSSFVGSVLNSYHKFSIP
                     AFTPTFLNVSFIVFALFFVPYFDPPVTALAWAVFVGGILQLGFQLPWLAKLGFLKLPK
                     LNFKDAAVNRVMKQMAPAILGVSVAQISLVINTIFASYLQSGSVSWMYYADRMMELPG
                     GVLGAALGTILLPTLSKHSANQDTEQFSALLDWGLRLCMLLTLPAAVGLAVLSFPLVA
                     TLFMYREFTLFDAQMTQHALIAYSFGLIGLIMIKVLAPGFYARQNIKTPVKIAIFTLI
                     CTQLMNLAFIGPLKHVGLSLAIGLGACINAGLLFYLLRRHGIYQPSKGWAAFLAKMLL
                     SLAVMGGGLYAAQIWLPFEWVRAGGMRKAGQLCILIAVGGGLYFASLAALGFRPRHFK
                     RVEN"
     gene            1726..2682
                     /locus_tag="WJJ54_001498"
     CDS             1726..2682
                     /locus_tag="WJJ54_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheT family hydrolase"
                     /protein_id="HEZ7342346.1"
                     /translation="MILTPPDTPFFLRNGNADTLAAKFLQRPAPAYRRELLPDSTGKT
                     KVAYDFSDGISPDAPLVVLFHGLEGSSGSHYAVELMLAVRDRGWNGAVVHFRSCGGIA
                     NTAPVFYHLGDTAEIAFTLDTLAARYREIYAVGVSLGGNALAKYLGEQGENALPQAAA
                     VISAPVDAEAAGRRFDSGITRLLYTRYFLRTLIPKARSLQGFQTAFAAGCKTLGEFDD
                     RFTAPLHGFADRHDYYRRTSCKPLLKHVAKPLLLLNAVNDPFLPPEALPTPDEVSEAV
                     TLFQPAHGGHVGFVGSTGGRLHLQWLPQTVLSYFDSFRTNSR"
     gene            2733..3515
                     /gene="trpC"
                     /locus_tag="WJJ54_001499"
     CDS             2733..3515
                     /gene="trpC"
                     /locus_tag="WJJ54_001499"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEZ7342347.1"
                     /translation="MTDILNKILATKAQEVAAQKAAVNTEHIRALAAEAAPVRSFIDS
                     IRGKHRLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQG
                     SPEYLKQAREAVSLPILRKDFIIDEYQVYQARAWGADAVLLIAAALEQEQLERFEAVA
                     HELGMTVLLELHDESELEKCRNLTTPLWGVNNRNLRTFEVSLDQTLSLLHALEGKTVV
                     TESGITGKADVEFMRARGVHTFLIGETFMRADDIEAEVGKLF"
     gene            3580..5880
                     /gene="recQ"
                     /locus_tag="WJJ54_001500"
     CDS             3580..5880
                     /gene="recQ"
                     /locus_tag="WJJ54_001500"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HEZ7342348.1"
                     /translation="MHRPTAKQILHEVFGYPEFRGRQEAVINTLAGGGSLTVLMPTGG
                     GKSLCYQIPALMREGVAVVVSPLIALMNDQVASLHVAGIEAAAVNSSTSADEAREIAD
                     KLAQCRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSQWGHDFRPEYQQLGM
                     LAERYPNVPRIALTATADAATRADIKHYLHLDDAPEFVSSFDRPNIYYQVIEKNNGKK
                     QLLEFIRKEMAGQSGIVYCLSRKKVEDVARFLRENGLNAIPYHAGLSMDVREENQRRF
                     THEDNIIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAASWLCY
                     GLNDWVLLRERIAEGNSDEVQKQIEMQKLDAMLSVCETAACRRVLLLKHFGEESEPCG
                     HCDNCLHPPVRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIRGNRHEQLS
                     TFGIGTELSDKEWRSVIRQCISLGYLTVNITRYQALQLTEAAKKVLKGETEVMLRPLK
                     RDKPAARTLKDNWLRTEREERLWQALRVWRMKQAEAEGIPAYMIFGDKTLRDLVEKMP
                     QNLNGLHDIYGLGEAKTERFGHGILEVCRNAAGFSRDAVIRPQTEREQQLRQKLEAWR
                     YEQARAENCALHAVLSDESLADMLADTPETETDLEGVHGLGSVRAAKYGRDILAVCRP
                     FSDGIDETAKHKRRLMRALIQWCNETAKHEQSEPYRILSKAALRAIAAKQPEGLAELA
                     AVYGVGEEKAARYGAAVLAVLERNAV"
BASE COUNT         1314 a         1782 c         1622 g         1265 t
ORIGIN      
        1 aaagtctgat cctgccgccc taaagggcgg ggtttcaacc gaaaaggaaa tacgatgaat
       61 atgctgggag ctttggcaaa agtcggcagc ctgacgatgg tgtcgcgcgt tttgggattt
      121 gtgcgcgata cggtcattgc gcgcgcattc ggcgcgggca tggcgacgga tgcgtttttt
      181 gtcgcgttca aactgcccaa cctgcttcgc cgcgtgtttg cggagggggc gtttgcccaa
      241 gcgtttgtgc cgattttggc ggaatataag gaaacgcgtt ctaaagaggc gacggaggct
      301 tttatccgcc atgtggcggg gatgctgtcg tttgtgctgg tcatcgttac cgcgctgggc
      361 atacttgccg cgccttgggt gatttatgtt tccgcacccg gttttgccaa agatgccgac
      421 aaatttcagc tctccatcga tttgctgcgg attacgttcc cctatatctt attgatttca
      481 ctttcctctt ttgtcggctc ggtactcaat tcctatcata aattcagcat tccggcgttt
      541 acgcccacgt tcctgaacgt gtcgtttatc gtattcgcgc tgtttttcgt gccgtatttc
      601 gatcctcccg ttaccgcgct ggcttgggcg gtttttgtcg gcggtatttt gcagctcggc
      661 tttcagctcc cttggttggc gaaactgggt tttttgaaac tgcccaaact gaatttcaaa
      721 gatgcggcgg tcaaccgcgt catgaaacaa atggcacctg cgattttggg cgtgagcgtg
      781 gcgcagattt ctttggttat caacacgatt ttcgcgtctt atctgcaatc gggcagcgtt
      841 tcatggatgt attacgccga ccgcatgatg gagctgcccg gcggcgtgct gggggcggca
      901 ctcggtacga ttttgctgcc gactttgtcc aaacactcgg caaaccaaga tacggaacag
      961 ttttccgccc tgctcgactg gggtttgcgc ctgtgcatgc tgctgacgct gccggcggcg
     1021 gtcggactgg cggtgttgtc gttcccgctg gtggcaacct tgtttatgta ccgagaattc
     1081 acgctgtttg acgcgcagat gacgcaacac gcgctgattg cctattcttt cggtttaatc
     1141 ggcttaatca tgattaaagt gttggcaccc ggcttctatg cgcggcaaaa catcaaaacg
     1201 cccgtcaaaa tcgccatctt cacgctcatc tgcacgcagt tgatgaacct tgcctttatc
     1261 ggcccactga aacacgtcgg actttcgctt gccatcggtc tgggcgcgtg tatcaatgcc
     1321 ggattgttgt tttacctgtt gcgcagacac ggtatttacc aacctagcaa gggttgggca
     1381 gcgttcttag caaaaatgct gctctcgctc gccgtgatgg gaggcggcct gtatgccgcc
     1441 caaatctggc tgccgtttga atgggtacgc gccggcggaa tgcggaaagc ggggcagctc
     1501 tgcatcctga ttgccgtcgg cggcggactg tatttcgcat cactggcggc tttgggcttc
     1561 cgtccgcgcc atttcaaacg cgtggaaaac tgaccgatgc cgatatcctt tttcggaaaa
     1621 cgctttttcc gcgcctatat tcgggcgcgc atcccccgcg tccgcaccgg ccggacgggc
     1681 tgccgcatca tcaatgccgt ctgaaaacaa gaaaaccgat accttatgat tttaacaccg
     1741 ccggacacgc cctttttcct ccgcaacggc aatgccgaca cgctggccgc caaattcctg
     1801 caacgccccg cacctgcata ccgccgcgag ctgcttccag acagcacggg taaaaccaaa
     1861 gtcgcctacg acttttcaga cggcatttcg cccgacgcac cgctggtcgt gctgtttcac
     1921 ggtttggaag gaagcagtgg cagccattac gcggtcgaac tgatgctcgc ggtacgcgat
     1981 cgcggttgga acggcgcagt cgtccatttc cgcagctgcg gcggcattgc caacaccgcc
     2041 ccggtgttct accacttggg cgataccgcc gaaatcgcct ttactttgga cacgctcgcc
     2101 gcgcgttacc gtgaaatata cgccgtcggc gtatcgctgg gcggcaacgc gctggcaaaa
     2161 tatttgggcg aacagggcga aaacgcgctg ccgcaagccg ccgccgtcat ctccgccccc
     2221 gtcgatgcag aggcggcagg cagacgcttc gacagcggca tcacgcggct gctctacacg
     2281 cgctacttcc tccgcaccct gatacccaaa gcacggtcgc tccaaggttt tcagacggca
     2341 tttgccgcag ggtgcaaaac actgggcgag tttgacgacc gtttcaccgc accgctgcac
     2401 ggctttgccg accggcacga ctactaccgc cgaacttcct gcaaaccgct gctcaaacac
     2461 gttgccaaac cgctgctcct gctcaatgcc gtcaacgacc ccttcctgcc gcccgaagcg
     2521 ttgccgacac cggacgaagt gtccgaagcc gttaccctgt tccagccggc acacggtggt
     2581 catgtcggct ttgtcggcag caccggcggc aggctgcacc tgcaatggtt gccgcagacc
     2641 gtcctgtcct atttcgacag cttccgcaca aacagtcgtt aacggtttga tgctaatatt
     2701 ccccctttcc ccagacgaat acggaacccg acatgaccga catcctcaat aaaatccttg
     2761 ccaccaaagc acaggaagtt gccgcccaaa aagccgccgt caacaccgaa cacatccgcg
     2821 cacttgccgc agaagccgcg cccgtccgca gcttcatcga ttcgatacgc ggcaaacacc
     2881 gcctcaacct gcccgccgtc attgccgaaa tcaaaaaagc aagcccgagc aaaggcctga
     2941 tccgtccgga cttccgaccg gccgagattg cacgcgccta tgaaaacgcc ggagcggcgt
     3001 gtttgtccgt actgaccgac gaaccctatt tccaaggttc gcccgaatac ctcaaacagg
     3061 cgcgcgaagc cgtatctctg cccattttgc gtaaagactt catcatcgac gaataccagg
     3121 tttatcaggc gcgcgcctgg ggggcggatg ctgtcctgct gattgccgcc gcactggaac
     3181 aggaacaatt ggaacgcttt gaagcggtgg cgcacgaatt gggtatgacc gtcctgctcg
     3241 agctgcacga tgaaagcgaa ttggaaaaat gccgcaacct gaccacgccg ttgtggggtg
     3301 taaacaaccg caacctgagg acttttgaag tctccctcga ccaaaccctg tcgctgctgc
     3361 acgcgctgga aggcaaaacc gtcgttaccg aaagcggcat tacgggtaag gcggatgtgg
     3421 aatttatgcg ggcgcgcggc gtgcacacct tcctgatcgg cgaaacgttc atgcgtgccg
     3481 acgatattga agcagaagtg ggcaaactct tctaaatccc gatttcagac ggcatattgc
     3541 cgccgaccga tcaacatcct taccgagcac ggaaccatca tgcaccgacc gaccgccaaa
     3601 cagattttgc acgaagtatt cggttatccc gaatttcgcg gcaggcagga ggctgtcatc
     3661 aatactttgg caggcggcgg gagtttgacg gtgctgatgc cgacgggcgg cggcaagtct
     3721 ttgtgttacc agattcccgc gctgatgcgc gaaggcgtgg cggttgtcgt atcgccgctg
     3781 attgcgctga tgaacgacca agtggccagc ctgcatgtag ccgggattga agcggcggca
     3841 gtcaacagca gcacatcggc agatgaagcg cgcgagattg ccgacaagct tgcccaatgc
     3901 cgtctgaaac tgctttatgt cgcaccggaa cgcttggtta ccgaccgctt tttgcgtttt
     3961 ctcgaccaac aaaccgtcag cctgttcgcc attgacgaag cgcactgcgt cagccagtgg
     4021 ggacacgatt tccgccccga ataccaacag ctcggcatgc ttgccgaacg ctatccgaac
     4081 gtcccgcgca tcgccctgac cgccaccgcc gatgcggcca cacgcgccga catcaagcat
     4141 tatctgcact tggacgatgc gcccgaattt gtctccagct ttgaccgccc gaatatttat
     4201 tatcaggtta tcgaaaaaaa taacggcaaa aaacaactgc ttgaatttat ccgcaaagaa
     4261 atggcgggac aaagcggcat tgtgtattgt ttaagccgca aaaaggtgga agatgtggcg
     4321 cggtttttgc gtgaaaacgg attaaacgcg attccgtatc atgccggttt gagcatggac
     4381 gtgcgcgagg aaaaccaacg ccgctttacg catgaagaca atattatcgt ggtggcgacc
     4441 gtggcgttcg gcatgggcat agacaaaccc gacgtgcgct ttgtcgccca tctcgatatg
     4501 ccccagagtg tcgaacattt ctatcaggaa tcggggcgtg ccggccggga cgggctgcct
     4561 gccgcgagct ggctgtgtta cggtttgaac gattgggtgt tgctgcgcga acggattgcc
     4621 gaaggcaaca gcgacgaggt gcaaaagcaa atcgaaatgc aaaaactcga tgccatgctt
     4681 tccgtctgcg aaaccgccgc ctgccgccgc gtactgctgc tcaaacattt cggcgaagaa
     4741 tccgaaccct gcggccattg cgacaactgc ctgcatccgc ccgtacggtt tgacggcacg
     4801 gtgttggtgc aaaaattact cagctgcgtg taccgcgccg gacaacgttt tgccgccggt
     4861 tacatcacca accttttgcg cggcaaaagc gacgattgga tacgcggcaa ccggcacgaa
     4921 caactgtcca ccttcggcat cggtacggag ttgtccgaca aagaatggcg cagcgtcatc
     4981 cgccagtgta tcagcctcgg ctacctcacc gtcaacatta cccgatatca ggcattgcaa
     5041 ctgaccgaag ccgccaaaaa agtcctcaaa ggcgaaaccg aagtgatgct gcgtccgctc
     5101 aagcgcgaca agcccgccgc ccgcaccctc aaagacaact ggctgcgtac cgaacgcgaa
     5161 gaacgcctgt ggcaggcatt gcgcgtttgg cgtatgaaac aggcagaagc cgaaggcatc
     5221 cccgcctata tgattttcgg cgacaaaacc ctgcgcgacc ttgtcgaaaa aatgccgcaa
     5281 aacctcaacg ggctgcacga catctacggc ttgggcgaag ccaaaaccga acgtttcgga
     5341 cacggcatac tcgaagtctg ccgcaacgcc gccggcttca gccgcgacgc ggtcatccgt
     5401 ccgcaaaccg aacgcgaaca acaactgcgt caaaaactcg aggcctggcg gtatgaacag
     5461 gcaagggcgg aaaactgcgc cctgcatgcc gtcctctccg acgaaagcct tgccgatatg
     5521 cttgccgata cgcccgaaac cgaaaccgac ctcgaaggcg tacacggctt gggcagcgta
     5581 cgcgccgcca aatacggacg ggacatcctc gccgtctgcc gtccgttttc agacggcatc
     5641 gatgaaaccg ccaaacacaa acgccgcctg atgcgcgccc tgatccaatg gtgcaacgaa
     5701 acggcaaaac acgaacagtc cgaaccctac cgcattctca gcaaagccgc cctacgcgcc
     5761 attgccgcca aacagccgga aggtttggcg gagcttgccg ccgtatacgg cgtaggcgaa
     5821 gaaaaagccg cacgttacgg tgcggcggtg ttggcggtat tggaacgaaa tgccgtctga
     5881 agcccgttac caagtttcag acggcattgc ctctatttaa aaattcctgt ttttatagtg
     5941 gattaacaaa aatcaggaca aggcggcgag ccgcagacag tac
//
LOCUS       DAWKJW010000120         5974 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.120, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000120 DAWKJW010000000
VERSION     DAWKJW010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5974
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.120"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(427..1494)
                     /gene="murG"
                     /locus_tag="WJJ54_001501"
     CDS             complement(427..1494)
                     /gene="murG"
                     /locus_tag="WJJ54_001501"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEZ7342349.1"
                     /translation="MGGKTFMLMAGGTGGHIFPALAVADSLRARGHHVIWLGSKDSME
                     ERIVPQYGIRLETLAIKGVRGNGIKRKLMLPVTLYQTVREAQRIIRKHRVECVIGFGG
                     FVTFPGGLAAKLLGVPIVIHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNP
                     VRADISNLPVPAERFQGREGRLKILVVGGSLGADVLNKTVPQALALLPDDARPQMYHQ
                     SGRGKLGSLQADYDALGVKAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGA
                     LLVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGGLNREKCLKWAENA
                     RTLALPHSADDVAEAAIECTA"
     gene            complement(1498..2823)
                     /locus_tag="WJJ54_001502"
     CDS             complement(1498..2823)
                     /locus_tag="WJJ54_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HEZ7342350.1"
                     /translation="MQTDWQVVFLKISEVLVKVGDGVHTLLLDRPIVRDGRKFDAPLL
                     WMVVLMTAFSLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGFLWFLCRMRT
                     WRRLVPWIFALSGLLLVVVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLF
                     TRREEVLRSMESLGWQSIWRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFG
                     LVLIMVQPDFGSFVVITVIAVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQR
                     VVAFLDPWKDPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIA
                     EEFGFFGMCVLIFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGV
                     NIGALPTKGLTLPLMSYGGSSVFFMLISMMLLLRIDYENRRKMRGYRVE"
     gene            complement(2949..4286)
                     /locus_tag="WJJ54_001503"
     CDS             complement(2949..4286)
                     /locus_tag="WJJ54_001503"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEZ7342351.1"
                     /translation="MTFQNKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKPERVS
                     QIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLA
                     DIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAEWQREGKK
                     ADVWVLELSSFQLENTESLRPTAATVLNISEDHLDRYDDLLDYAHTKAKIFRGDGVQV
                     LNADDAFCRAMKRAGREVKWFSLEHEADFWLERETGRLKQGNEDLIATQDIPLQGLHN
                     ATNVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEKIGEKNGVVFIDDSKGTNVGAT
                     AAAIAGLQNPLFVILGGMGKGQDFTPLRDALAGKAKGVFLIGVDAPQIRRDLDGCDLN
                     MTDCATLEEAVQKAYAQAEAGDIVLLSPACASFDMFKGYAHRSEVFIGAFKAL"
     gene            complement(4374..4754)
                     /locus_tag="WJJ54_001504"
     CDS             complement(4374..4754)
                     /locus_tag="WJJ54_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HEZ7342352.1"
                     /translation="MKQTVKWLAAALIALGLNQAVWADDVSDFRENLQAAEQGNAAAQ
                     YNLGAMYYKGQGVRRDDAEAVRWYRQAAEQGLAQAQNNLGVMYAERRGVRQDRALAQE
                     WLGKACQNGNQDGCDNDQRLKAGY"
     gene            complement(4869..5951)
                     /locus_tag="WJJ54_001505"
     CDS             complement(4869..5951)
                     /locus_tag="WJJ54_001505"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEZ7342353.1"
                     /translation="MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALAFSLMFGPWTI
                     RRLTALKCGQAVRTDGPQTHLVKNGTPTMGGSLILTAITVSTLLWGNWANPYIWILLG
                     VLLATGALGFYDDWRKVVYKDPNGVSAKFKMVWQSSVAIIAGLALFYLAANSANNILI
                     VPFFKQIALPLGVVGFLVLSYLTIVGTSNAVNLTDGLDGLATFPVVLVAAGLAIFAYA
                     SGHSQFAQYLQLPYVAGANEVVIFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAA
                     LGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWK
                     ETQVVVRFWIITIVLVLIGLSTLKIR"
BASE COUNT         1417 a         1738 c         1545 g         1274 t
ORIGIN      
        1 ctgagcaaag tgagtgcaca aagccatctg aaggcgatgt gtttgaacct tttgaaagcg
       61 gccaacaggc taagtgcgcc cgctgccgcc taaaaagcag cccggatgcc tgattatcgg
      121 gtgtccgtgg aggattaagg gggtatttgg gtagaattag gaggtatttg gggcgaaaat
      181 agacgaaaac ctgtgtttgg gtttcggctg tcgggaggga aaggaatttt gcaaaggtct
      241 caggatttca tatcgatggc aatatagtta aaaataaggc tgcacccagc ggcaaaccct
      301 gctttcctgc ccattttcaa actcgatttc atataccgaa acaccagaaa aaacaaaata
      361 taaggccgtc tgaaaccggt ttcgtggttt tcagacggca tctgtttcgt ttatcgcatc
      421 atgtcatcat gccgtacact cgatagcggc ttccgccacg tcgtccgcac tgtgcggcag
      481 tgccaacgta cgggcgtttt ctgcccattt gaggcatttt tcgcggttta agccgccgag
      541 aatctcggcg agtttttccg ccgtcaactg ggtttgcggc aacagcaatc ccgcctccgc
      601 ctgcaccata aaacgcgcgt tggcggtttg gtgatcgtca accgcgtggg ggtacggaac
      661 gagcaacgca cccaatcccg ccgccgtcaa ctcggcaatc gtcagcgcgc cggcacggca
      721 aatcaccaaa tcggcatcgc ggtaggcgga caccatgtcg gtaataaatt ccacgcattc
      781 ggctttcacg cccagcgcgt cgtaatccgc ctgcaagctg cccagcttgc cccgtcccga
      841 ttggtggtac atctgcggac gcgcatcgtc gggcagcaaa gccaatgcct gcggtacggt
      901 tttgttcaaa acgtccgcgc ccaaactgcc gccgaccacc aaaattttca gacggccttc
      961 acgcccttgg aagcgttcgg caggcacggg caggttgcta atatcggcgc ggacggggtt
     1021 gccgaccaag ccgccttcgt ggctgaacgc tttcggaaaa gcgtacaaca cccgcttcgc
     1081 ccagcgcgac aggtggcggt tggacaaacc tgccacggcg ttttgctcgt gaatcacaat
     1141 cggcacgcct aatagcttcg ccgccaaacc gccggggaag gtaacgaagc cgccgaagcc
     1201 gatgacgcac tcgacacggt gtttgcggat aatccgctgc gcttcgcgga cggtttgata
     1261 caaagtaacc ggcagcatca gtttgcgttt gatgccgttg ccgcgcacgc ctttaatcgc
     1321 cagcgtttcc aagcgtatgc cgtattgcgg cacgatacgc tcttccatcg aatccttgct
     1381 gcccagccaa atcacatgat ggccgcgcgc gcgcaatgaa tccgccaccg ccagcgcggg
     1441 gaaaatatgt ccgcccgttc cgcccgccat cagcataaag gttttaccgc ccatgattta
     1501 ctccacccga taaccgcgca ttttccggcg gttttcataa tctatacgca acagcagcat
     1561 catgctgatc agcatgaaaa agactgacga accgccatag gacatcaacg gcagcgtcag
     1621 acctttggtc ggcaaagcac cgatgttcac accgatattg aagaaacttt ggataccgat
     1681 ccaaatgccg atacccgaag cgatataggc gttgaaagtc aaacccaaat cgcgcgactg
     1741 cttgccgatg gaaaacgccc gcaccaccag ccagccgtaa cagaatatca gcacgcacat
     1801 accgaagaaa ccgaattctt cggcgatgat ggcaaaaata aaatcggtat gcgcttccgg
     1861 cagaaagccg cgtttgctca aactcgcacc caaacccata ccgaaccact ctccgcgccc
     1921 gattgccatc agagagtggg taagctggta gccggcaccc tgcgggtctt tccacgggtc
     1981 caaaaatgcc actacccgct gcacacggta gggagcggcg gtaatcatca gcaccatccc
     2041 gcccaagacg ctgcctacca ggacgaaaaa atatttccac ggcaatcctg ccaaaaacag
     2101 cattccaacg gcaatgacgg taatgacgac aaacgaaccg aaatccggct gtaccattat
     2161 cagcaccaaa ccgaacgcca ccagcataat cggcaggatg atcgcccgga aacggccgta
     2221 catttctaat gtttcacgac gtgcctgcgg attggtggcg gacatgatca gattggccgt
     2281 cccccgccaa atcgactgcc aacccaaact ttccatgctg cgcaacactt cttcacggcg
     2341 cgtgaacagg cttgccaaat aaaggatgac cgccagcttg aacagctcgg tcggctggaa
     2401 attcaacggg cccaaaggta tccaacgggt cgcgccattg atttcgcgcc cggcaatcaa
     2461 tacgactacc agcaacaggc cggatagggc aaaaatccac ggcacaagcc gccgccatgt
     2521 cctcatcctg caaagaaacc ataaaaaacc gctcgctatc aagccggcaa cgacgaaccc
     2581 cgcctgtctg gtcaaataga aaaactgatc gccgccttct tttgatgcca aatacacaga
     2641 agccgaataa atcatcagca ggctgaacgc cgtcatcagc accaccatcc acaaaagcgg
     2701 cgcgtcgaat ttcctgccgt cgcgcacaat cggcctgtcg agcagcagag tgtggacacc
     2761 gtcgcccact tttaccaata cttccgaaat cttcaaaaaa accacctgcc agtctgtttg
     2821 cacctgccgc aaagggcaaa aatttcagac ggcagacaat gccgtccgaa catacgatac
     2881 atcccaaatc ggtattctaa atctttactt gccgcccaac aatgacggcg tttgcgtttc
     2941 agacggtatc acaaagcctt aaacgccccg ataaacactt ccgaacggtg cgcatagcct
     3001 ttaaacatat cgaagcttgc gcaggcgggg ctgagcaaca cgatgtcgcc cgcttcggct
     3061 tgggcatatg ccttctgaac cgcttcttcc aaagtggcgc agtcggtcat attcagatcg
     3121 cagccgtcca aatcgcggcg gatttgcggc gcatcgacac cgatcaggaa cacgcctttt
     3181 gccttgccgg caagcgcgtc gcgcaggggc gtgaagtcct gccctttgcc catgccgcct
     3241 aaaatcacga agagcggatt ttgcaaaccg gcaatcgcgg cggctgtcgc gccgacgttc
     3301 gtgcctttgc tgtcatcgat aaacaccacg ccgtttttct cgccgatttt ttccacgcgg
     3361 tgcggcaggc cttgaaaggt tttgacgtgt tcgagcaatg cttcgcgcgg caaaccgacg
     3421 gcttcgcaca aggcaacggc agccatcacg ttagtggcgt tgtgcaagcc ttgcaacgga
     3481 atatcttgcg tggcaatcaa atcttcattg ccttgtttca ggcggcctgt ctcgcgttcc
     3541 aaccaaaaat cggcttcgtg ttccaacgaa aaccatttta cctcgcgccc tgcccgtttc
     3601 atggcacggc agaacgcatc gtccgcattc aaaacctgca caccgtcgcc acggaaaatc
     3661 ttggctttgg tatgcgcgta gtcgagcaag tcgtcgtagc ggtcgagatg gtcttcggaa
     3721 atgttcagta ccgtcgccgc agtcgggcgc aggctttcgg tgttttccag ttggaagctg
     3781 gaaagctcca acacccacac gtccgccttt ttgccttcgc gctgccattc cgcctccaaa
     3841 accggcgtgc cgatattgcc cgcgataacg gtatccagcc cgcacttgat gcagagatag
     3901 ccgaccaggc tcgttaccgt ggttttgccg ttgctgccgg taatcgcaat taccttgtcg
     3961 cctcggcggt tcacaatgtc cgccagcaat tcgatgtcgc ccaacacgcg tccgccgttt
     4021 tgcttgaacg cctcgatatc cggctgccgc tcgctgatgc cggggctgag tgccagaata
     4081 tcgaaaccgt tgtccagcgc atctttcaga cggcccgtat aaaacaccag cccgtcaaac
     4141 atcttaccga tttgcgacac ccgctccggt ttcagctccg catcataagc ggcaacctcc
     4201 gcgccgtttt tgcgtaggta ggcaatcatg gaaatacccg tgccgccgag tccggcgacg
     4261 aggatttttt tgttttggaa agtcattttg gttttgtcct aaaacaaatc atattgggca
     4321 ggagggaatg tccgctcctg ctcaagccgc tttcagacgg catcgcgagc cgattaataa
     4381 cccgccttca ggcgttggtc attgtcgcag ccgtcttggt ttccgttttg acaagccttg
     4441 ccaagccatt cttgtgcaag ggcgcggtct tggcgcacgc cgcgtctttc ggcatacatc
     4501 acgcccaaat tgttttgggc ttgggctaac ccctgttccg ccgcctgccg ataccatctg
     4561 accgcttcag catcatcccg gcgcacgcct tgtcctttgt aatacattgc gcccaaattg
     4621 tattgggctg ctgcatttcc ctgctctgcc gcctgcaagt tttcccgaaa atccgatacg
     4681 tcatccgccc acaccgcttg gttcaagccc aaggcaatca gggcggcggc aagccatttg
     4741 actgtctgtt tcatggtttt acttctgttt tagtataagc cgccgttaac gatagggctg
     4801 ggcggattgt cgccgcaggt ttattgcgcg ttcaaatgcc gtctgaaaga tgttcagacg
     4861 gcataggttc agcggatttt gagggtactc aagccgatta acaccaagac gatggtaata
     4921 atccaaaagc ggacgacgac ttgggtttct ttccagcctt tttgttcgta gtggtggtgg
     4981 atgggcgcca tcaggaagat gcgttttttg gttttcttat accaaccgac ctgaagcata
     5041 acggatacgg cttctacgac aaataatccg cccataatga cgaggacaaa ctcttggcgg
     5101 acgatgacgg cgacggtacc gagcgcggca cccaatgcca atgcaccgac atcgcccata
     5161 aagacttgcg cgggataggc gttaaaccac aagaaaccga ggcacgcgcc gcacatggcg
     5221 gtacagaaaa tcaccacttc gtttgcgccg gcaacgtaag gtaattgcag gtattgggca
     5281 aattgtgagt ggccgctggc ataggcgaag atggcgaggc cggcggcaac gaggacgacg
     5341 gggaaggtcg caaggccgtc caagccgtcg gtgaggttga cggcattgga tgtgccgacg
     5401 atggtcaggt aagacaacac caaaaagccg accacgccca gcggcagggc gatttgtttg
     5461 aagaacggga caatcaaaat attgttggcg gaattggcgg caaggtaaaa caatgccaaa
     5521 ccggcgataa tggcaacgct tgactgccac accattttga atttggcgga cacgccgttg
     5581 gggtctttat agacgacttt gcgccagtcg tcgtaaaaac cgagtgcgcc cgtggcgagc
     5641 aatacgccca agagaatcca gatatacggg tttgcccagt tgccccacaa cagggtggac
     5701 acggtaatgg cggtcagaat cagcgaaccg cccatcgtcg gcgtgccgtt tttgacgagg
     5761 tgggtttgcg gaccgtcggt acgcactgcc tgcccgcatt tgagcgcggt cagcctgcgt
     5821 atcgtccacg ggccgaacat cagggaaaac gccaaggcgg tcaacgccgc catgacggcg
     5881 cggaatgtgg tgtattgaaa aatattcaga ccggttaacc agttgctgaa atgtgcgagc
     5941 cataaaaaca tggggcttcc tttttttgtt ttgt
//
LOCUS       DAWKJW010000121         5973 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.121, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000121 DAWKJW010000000
VERSION     DAWKJW010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5973)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5973)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5973
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.121"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(40..963)
                     /gene="truB"
                     /locus_tag="WJJ54_001506"
     CDS             complement(40..963)
                     /gene="truB"
                     /locus_tag="WJJ54_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEZ7342354.1"
                     /translation="MNTGTPQKRAVNGVLLLDKPEGLSSNTALQKARRLFHAEKAGHT
                     GVLDPLATGLLPVCFGEATKFAQYLLDADKAYTATLKLGEASSTGDAEGEIVATARAD
                     ISLAEFQTACKALTGDIRQVPPMFSALKHEGKPLYEYARKGIVIERKARYITVYAIDI
                     AEFDAPKAVIDVRCSKGTYIRTLSEDIAKHIGTFAHLTALRRTETAGFTIAQSHTLEA
                     LANLNETERDSLLLPCDVLVSHFPQTVLNDYAVHMLHCGQRPRFEEDLPSDTPVRVYT
                     ENGRFVGLAEYQKEICRLKALRLMNTAASAA"
     gene            complement(996..1367)
                     /gene="rbfA"
                     /locus_tag="WJJ54_001507"
     CDS             complement(996..1367)
                     /gene="rbfA"
                     /locus_tag="WJJ54_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEZ7342355.1"
                     /translation="MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITVNEVE
                     VTRDYSHATVFYTVLNQDAREITEEVLEHARGHLRSELAKRIKLFKIPELHFKYDESL
                     ERGMNLSALIDQVAAEKPVED"
     gene            1557..2801
                     /gene="clpX"
                     /locus_tag="WJJ54_001508"
     CDS             1557..2801
                     /gene="clpX"
                     /locus_tag="WJJ54_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEZ7342356.1"
                     /translation="MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCIEILHED
                     GNDGTSSESVGQTSEEPGKLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRHP
                     KAGANVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
                     IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK
                     DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVK
                     QYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLQGL
                     KKVVVGKAVIEEGKEPELVFES"
     gene            complement(2866..4059)
                     /locus_tag="WJJ54_001509"
     CDS             complement(2866..4059)
                     /locus_tag="WJJ54_001509"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine/succinyldiaminopimelate
                     transaminase"
                     /protein_id="HEZ7342357.1"
                     /translation="MQNYLTPNFAFAPMIPERASGSRVWDTEGREYIDFSGGIAVNAL
                     GHCHPALADALNTQMHKLWHISNIYTTRPAQELAQKLVKNSFADKVFFCNSGAEANEA
                     ALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVP
                     FNDIAALEAAVGEQTCAVIIEPIQGESGILPATAEYLQTARRLCDRHNALLILDEVQT
                     GMGHTGRLFAYEHYGVVPDILSSAKALGCGFPIGAMLATETIAAAFQPGTHGSTFGGN
                     PMACAVGSRAFDIINAPETLHNVCSQGQKLQTALRSLGEQTGVFKQVRGMGLLLGCVL
                     DAPYRGRASEITAAALKHGVMILVAGADVLRFAPSLLLDDEDTAEGLRRLEHVLTEFA
                     AANRP"
     gene            4463..4963
                     /locus_tag="WJJ54_001510"
     CDS             4463..4963
                     /locus_tag="WJJ54_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342358.1"
                     /translation="MNAMPQTAAQNETLHICSIIVDDARDFSPMLLDAGRDDTLISES
                     MIPQIRTVAALIAAERHDFSRSSPAEFTDAADFFAARILVLGVRRFHLDVSLLQILKT
                     ANSRARRFAEKHRLFFTPAQAELSLNKHKNRRLLTVETEHEVENKGNPVANSLAFVRK
                     LHTLPL"
     gene            5048..5602
                     /locus_tag="WJJ54_001511"
     CDS             5048..5602
                     /locus_tag="WJJ54_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342359.1"
                     /translation="MKKIIASALIATFALAACQDDTQARLEQQQKQIEALQQQLAQQA
                     DDTVYQLTPEAVKDTIPAEAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLVGAAAG
                     AFIGNALANKFTRAGNQDSPVARRARAAYHQSAHPNARTSRDLNTRSLRAKQQAAQAQ
                     RYRPTTRPPANYRRPAMRGFGRRR"
     gene            5616..5816
                     /locus_tag="WJJ54_001512"
     CDS             5616..5816
                     /locus_tag="WJJ54_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009348581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342360.1"
                     /translation="MPSEELSDGIFAFVRDIVMLPFDFQTAFCFQAFDVGMAILIYVR
                     WQGGIVMPPLGFQTASYRTVKP"
BASE COUNT         1411 a         1609 c         1619 g         1334 t
ORIGIN      
        1 acacattatt caaacacagc ccgtattttt aaccgccgtt caggcggcgg atgccgccgt
       61 gttcatcagg cgcaaggctt tcagacggca tatttctttt tgatattccg ccagaccgac
      121 aaagcggccg ttttccgtgt aaacgcgtac cggcgtgtcg gaaggcaggt cttcttcgaa
      181 acgcggacgt tgtccgcagt ggagcatatg gacggcataa tcgtttaaaa cggtttgggg
      241 aaagtgtgaa accaatacgt cgcagggtag cagcaagctg tcgcgttctg tttcgttcaa
      301 atttgccaag gcctcaagcg tgtggctttg ggcgatggta aagccggcgg tttcagtgcg
      361 gcgcagggcg gtcaggtggg cgaacgtgcc gatgtgtttg gcgatgtctt cgctgagggt
      421 gcggatgtag gtgcctttgc tgcaacgtac gtcgatgacg gctttgggcg cgtcaaattc
      481 ggcaatatcg atggcgtaaa cggtaatgta gcgcgctttg cgttcgatga cgatgccttt
      541 gcgggcgtat tcgtacagcg gtttgccttc gtgcttgagc gcggaaaaca ttggcggcac
      601 ttggcggatg tcgcccgtta atgctttgca ggccgtctga aattcggcta aggaaatatc
      661 ggcgcgggcg gtggcaacga tttcgccttc ggcatcgccc gtgctgctgg cttcgccgag
      721 tttcagcgtg gcggtgtagg ctttgtcggc atccagcagg tattgggcga acttggtcgc
      781 ttcaccgaag cagacgggca aaagtccagt tgccaaaggg tcgagcacgc cggtatgtcc
      841 ggctttttcg gcatgaaaca aacgccgcgc tttttgcagc gcggtgttgc tggaaaggcc
      901 ttcgggtttg tccaagagca aaacaccgtt gacggcacgt ttttggggtg tgcctgtatt
      961 catggttcga tgttcggacg gcatgggcat atccgtcagt cttcaaccgg tttttccgcc
     1021 gccacttggt cgataagggc ggacaggttc ataccgcgtt ccaaggactc gtcgtatttg
     1081 aaatgcagct cggggatttt gaacagcttg atgcgtttgg ccaattcgct gcggaggtgt
     1141 ccgcgcgcgt gttccagcac ttcttccgta atttcgcgcg catcttggtt caaaacggtg
     1201 tagaacacgg tggcgtggct gtaatcgcgg gtaacttcga cttcgttgac ggtaatgaag
     1261 ccggcgcgcg ggtctttcag tccggtacgg acgagttcgg caagctcgcg cataatttgt
     1321 tctttgacac ggtcttggcg ggcatagccg cgttggggtt ttctcataaa tatcctcaga
     1381 tttcagattt ggtttcagac ggcatttttg ccgccggggc ggttgcgaaa gggcgtatta
     1441 tagccgaatc ggcgggattt taaggtaata cattgataag aacggatata gttattatac
     1501 ttggcaaccc gaacggcgcg tgccgtttct gtaacgcata cattgtaaag aaagctatgt
     1561 ccaacgaaaa ccgtacctgt tccttttgcg gaaaatccaa atcacacgtc aaacatttaa
     1621 ttgagggcga aaacgccttt atctgtgacg aatgcgtctc aaactgtatt gaaatattgc
     1681 atgaagacgg aaatgacggc acgtcttcgg aaagtgtcgg acagacatcg gaagagcccg
     1741 gcaagctgcc cacgcccgcc gaaatcgtcg ccaacctcaa cgaccacgtt atcggtcagg
     1801 aacaagccaa gaaagccttg gcggtgtcgg tgtacaacca ttacaaacgc ctgcgccacc
     1861 cgaaagccgg agctaatgtc gaattgtcga aatccaacat cctgcttatc ggcccgaccg
     1921 gatcgggtaa aaccctgctg gcgcaatctt tggcgcgcaa actggatgtg ccgttcgtga
     1981 tggcagatgc aaccacgctg accgaagcag gttatgtcgg cgaagatgtc gagcaaatca
     2041 tcaccaaact cttgggcaaa tgtgatttcg atgtcgaaaa agcccaacgc ggcatcgtct
     2101 atatcgacga aatcgataag atttcacgca aaagcgacaa tccgtccatc acgcgcgacg
     2161 tgtccggcga aggcgtgcag caagccttgc tgaaactgat tgaaggtacg gtggccagcg
     2221 ttccgcccca aggcggccgc aagcatccga atcaggaatt tatcaacgtc gataccacca
     2281 acatcctgtt tatctgcggc ggcgcgtttg caggcttgga aaaagtcatc cgccagcgta
     2341 ctgaaaaagg cggtatcggt ttcggtgcgt ccgttcacag caaggacgaa aatgccgaca
     2401 ttaccaagct gttcggcatc gtcgaaccgg aagatttaat caaattcggt ctgattccgg
     2461 aattaatcgg acgtttgcct gtgattgcaa cgttagaaga actggatgag gacgcgctga
     2521 ttaatatttt gaccgagccg aaaaatgctt tggtcaagca gtatcaagcc ttgttcggta
     2581 tggaaaatgt cgaactggag tttgaagaag gcgcattgcg ttccatcgcg cgtcaggcaa
     2641 tggagcgcaa aaccggcgcg cgcggcctgc gttccatcgt cgaacgctgc ctgttggata
     2701 cgatgtaccg cctgcccgat ttgcaaggct tgaaaaaagt ggtggtcggt aaggcagtca
     2761 tcgaagaggg caaggaaccg gaattggtgt tcgagtcctg atggcaaaca aaaccgcttc
     2821 ggaacgttga accacgtttc cgaagcggtt ttttgttttt gatgcctagg ggcggtttgc
     2881 ggcggcaaat tccgtcagca cgtgttccaa acgccgcaaa ccttccgccg tatcctcatc
     2941 gtccaacagc agcgaaggcg cgaaacgcaa tacgtccgca cccgcaacca aaatcatcac
     3001 gccgtgtttc aaggcggcgg cggttatttc ggatgcgcgt ccgcgataag gcgcgtccaa
     3061 cacgcagccg agcagcagcc ccatgccgcg aacttgctta aacacgcccg tttgttctcc
     3121 caaagaccgc aatgccgtct gaagtttctg cccctgactg cagacgttgt gcaaggtttc
     3181 cggcgcgttg atgatgtcga aggcgcggct gccgaccgca cacgccatcg ggttgccgcc
     3241 gaaagtcgag ccatgcgtgc ccggttggaa ggcggcggca atcgtttctg tcgccagcat
     3301 cgcgccgatc ggaaagccgc agcccaaggc ttttgccgaa ctcaaaatat cgggaacaac
     3361 gccgtaatgt tcataggcaa acagcctgcc cgtatgcccc atcccggttt gaacttcgtc
     3421 caaaatcaac aacgcattgt gccggtcgca cagacggcgc gcggtttgca aatattccgc
     3481 agtggcgggc aggatgccgc tttcgccctg tatcggctcg atgatgaccg cgcaggtctg
     3541 ttcgccgacg gcagcttcca gcgcggcaat atcgttaaac ggaacgtgcg taatgccttg
     3601 cggcaggggt gcataatcct tgctgtattt cggctgaccg ccgacggaca cggtaaacag
     3661 cgtgcgtccg tggaaactgt tgatacaggc gacgatttcg ctttttcctc cgccgaaacg
     3721 gtcgcgcgca tatttccttg ccagcttcaa cgccgcctca ttcgcttccg cgcccgagtt
     3781 gcagaaaaaa accttgtcgg caaaactgtt cttcaccaat ttttgcgcca attcctgcgc
     3841 cggacgcgtc gtatagatat tggaaatgtg ccacagcttg tgcatctgcg tgtttaaagc
     3901 atcggcaagg gcagggtggc agtgtcccag cgcattgacg gcgatgccgc ctgaaaagtc
     3961 aatatattca cgcccttccg tatcccaaac gcggctgcct gaagcgcgtt cgggaatcat
     4021 cggtgcaaag gcgaaattgg gggtcagata gttttgcata attgctcctg attgcggttt
     4081 tgctcgggat tatgcaccgt ttttcaaagc agataaaggg aaattgccga caatatcggg
     4141 cagcggtaaa aataaaccga aatattttca atcggataga tgaaaaatca aaaaaatttc
     4201 gataaaatgc ttgaggcgcg gcagcgtttt gatttagaat ctccccaata tttttatctt
     4261 cagacggcat ttcatcatgc aaggcaaaaa atttacaacc gcttattgct attggtacca
     4321 cacagacgtg cggtactttt ttgcgcttgc ttgaaatcca tcccatacgc aaaacaggcc
     4381 gctcgaaaat ggggcggctt ttttgttacc ttcacacagg tcgcccgatt cggcaacaca
     4441 cgacagaatc aggaaaatga ccatgaatgc aatgccccaa accgccgcac aaaacgaaac
     4501 cctgcacatt tgcagcatta ttgtcgatga tgcacgggat ttttccccca tgcttctcga
     4561 tgcagggcgg gacgacacac tcatcagcga atcgatgatt ccgcaaatcc gcactgttgc
     4621 cgccctgata gccgccgaac ggcacgactt cagccgcagc agccccgccg agtttaccga
     4681 tgccgccgat ttttttgccg cacggattct cgtattgggc gtgcgacgct tccatctgga
     4741 cgtatcgctg cttcagattt tgaaaaccgc caacagccgc gcccgccgct ttgccgaaaa
     4801 acaccgcctg tttttcacac ccgcacaagc cgaattgagc ctgaacaaac acaaaaaccg
     4861 ccgcctgctg accgtagaaa ccgaacacga agtcgaaaac aaaggcaacc cagtcgccaa
     4921 cagcctcgca tttgtccgca aattgcacac cctgcccctg taaacatcac gatttgccgg
     4981 cagaatgctt gccaaaattc ccgacggcga tacaataaaa ccgattttcc acccaaacag
     5041 gacacacatg aaaaaaatca tcgcctccgc gcttatcgca acattcgcac tcgccgcctg
     5101 ccaagacgac acgcaggcgc ggctcgaaca gcagcagaaa cagattgaag ccctgcaaca
     5161 gcagctcgca cagcaggcag acgatacggt ttaccaactg actcccgaag cagtcaaaga
     5221 caccattcct gccgaagcac aggcaaacgg caacaacggg caacccgtta ccggtaaaga
     5281 cgggcagcag tatatttacg accaatcgac aggaagctgg ctgctgcaaa gcctggtcgg
     5341 cgcggcggcg ggcgcgttta tcggcaacgc gctggcaaac aaattcacac gggcaggcaa
     5401 ccaagacagt cccgtcgccc ggcgcgcgcg tgccgcctac catcagtccg cacatcccaa
     5461 tgcgcgcacc agcagggatt tgaacacgcg cagcctccgt gcaaaacaac aggcggcgca
     5521 ggcgcagcgt taccgcccga caacgcgccc gcccgccaat taccgccgcc ccgctatgcg
     5581 cggtttcggc aggaggcggt aaacccggcg caccaatgcc gtctgaagag ctttcagacg
     5641 gcatttttgc atttgttagg gacattgtta tgttgccgtt tgattttcag acggcatttt
     5701 gtttccaagc gtttgatgtc gggatggcaa ttctgattta cgtgcgttgg cagggcggca
     5761 ttgtcatgcc gccgttgggt tttcagacgg catcatatcg aacagtcaag ccgtagggcg
     5821 agcattcttg cccaccgttg caagggcggg atttggtggg caggaatgcc caccctgcat
     5881 ctgaaaccct tccgtgtcat tcccgtgcag gaaggaatct agatatttga atttacggaa
     5941 attttcaatc gttgccaaag cggaaaaggg ttt
//
LOCUS       DAWKJW010000122         5899 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.122, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000122 DAWKJW010000000
VERSION     DAWKJW010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5899)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5899)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5899
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.122"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            17..208
                     /locus_tag="WJJ54_001513"
     CDS             17..208
                     /locus_tag="WJJ54_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342361.1"
                     /translation="MFQQRTAHQAPHCVLPERDYPPIRFYRHKQTGFNRKGMGIKSIS
                     DTSRAMPSENQSPLSDGIV"
     gene            285..1232
                     /locus_tag="WJJ54_001514"
     CDS             285..1232
                     /locus_tag="WJJ54_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HEZ7342362.1"
                     /translation="MNILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLL
                     GIIMFGMGLTLKPSDFDILFKHPKAVIIGVIAQFAIMPATAWLLSKLLNLPAEIAVGV
                     ILVGCCPGGTASNVMAYLARGNVALSVAVTSVSTLISPLLTPAIFLMLAGEMLEIQAA
                     GMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI
                     MESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKTLTIEVGMQNSGLAAALAVAH
                     FAAAPVVAVPGALFSVWHNISGSLLATYWAAKAGKHKKP"
     gene            complement(1385..2509)
                     /gene="rluD"
                     /locus_tag="WJJ54_001515"
     CDS             complement(1385..2509)
                     /gene="rluD"
                     /locus_tag="WJJ54_001515"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HEZ7342363.1"
                     /translation="MQNTSFDNESDYSDDSDFASASETENRIGLTVPLELAGGRLDAV
                     LAKLLPDYSRSRLTSWIKEGAVIVNDKPSQPKDKMIGGEQICVTVRPSEENLAFVPEP
                     MALDIVYEDDTVIVVNKPAGLVVHPAAGNWSGTLLNGLLAHCPELSQIPRAGIVHRLD
                     KETSGLMVVAKTLSAQNSLVRQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRL
                     KMAVVKFGGKPAVTHVKVLERYLAHSYIECSLETGRTHQIRVHMREANHPLAGDPVYG
                     NPRHPCGDTVKEAVKSLGARQALHAYRLSFTHPESGETVSFEAPIPDDIYHLLSVLRL
                     EAGLDSSLSNEEEWQDKFGADDDDDWNEDDYDVEVVYVRE"
     gene            2508..3311
                     /locus_tag="WJJ54_001516"
     CDS             2508..3311
                     /locus_tag="WJJ54_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEZ7342364.1"
                     /translation="MKKILLTVSLGLALSACATQGTVDKDAQITQDWSVEKLYAEAQD
                     ELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLH
                     PQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNS
                     KYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESL
                     AILELAYQKLGKPQLAADTRRVLETNFPKSPFLTHAWQPDDMPWWRYWH"
     gene            complement(3369..5588)
                     /locus_tag="WJJ54_001517"
     CDS             complement(3369..5588)
                     /locus_tag="WJJ54_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HEZ7342365.1"
                     /translation="MFRRWFLPCWVVGAAASFALPVVPHWLFWLAAFAVFAVFARRFA
                     FAGLMLCVLAGAAYGVFRTEAALSSQWRAEAVSGVPLTVEVADMPRSDGRRVQFAAKA
                     VDSGGRTFDLLLSDYKRREWAVGSRWRITARVHPVVGELNLRGLNREAWALSNGIGGA
                     GTVGADRVLLHGGSGWGIAVWRSRISRNWQQADADGGLSDGIGLMRALSVGEQSALRP
                     ELWQAFRPLGLTHLVSISGLHVTMVAVMFAWLAKRLLACSPRLPARPRAWVLAAGCAG
                     ALFYALLAGFSVPTQRSVLMLAAFAWAWRRGRLSAWATWWQALAAVLLFDPSAVLGVG
                     TWLSFGLVAALIWACSGRLHEGKRQTALRGQWAASVLSLVLLGYLFASLPLISPLVNA
                     VAIPWFSWVLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLADVSPEFAVASAPLP
                     LLVLAVCAALLLLLPRGLGLRPWAVLLLAGFVFYRSPGVPENEVAVTVWDAGQGLSVS
                     VQTANHHLLFDTGTAAAAQMGIVPSLNAAGVRRLDKLVLSHHDSDHDGGFQAVGKIPN
                     GGIYAGQPEFYEGARHCAEQRWQWDGVDFEFLMPSERKNIDDNGKSCVLRVVAGGAAL
                     LVTGDLDTKGEESLVGKYGGNLYSQVLVLGHHGSNTSSSGVFLNAVSPEYAVASSGYA
                     NAYKHPTEAVQNRVRAHGIKLLRTDLSGALQFGLGRGGVKAQRLRGYKFYWQKKPFE"
BASE COUNT         1438 a         1864 c         1418 g         1179 t
ORIGIN      
        1 tttctccgag ctttatatgt ttcaacagag gacggcacat caagcaccgc actgcgtgtt
       61 gcccgaacga gactaccctc cgattagatt ctatcgccat aaacagacgg gtttcaaccg
      121 aaaaggaatg ggaataaagt ccatttccga cacctctcgg gcgatgccgt ctgaaaacca
      181 atctccactt tcagacggca ttgtttaggc acggtcattt tgcaaattaa ggttaaggcg
      241 tgtatgcttg ccttccctta aaaacaaaca cgcaacgcat tattatgaat atcctcagta
      301 aaatcagcag ctttatcgga aaaacatttt ccctctgggc cgcgctcttt gccgccgccg
      361 cttttttcgc gcccgacacc ttcaaatggg cggggcctta tattccttgg ctgttgggca
      421 ttattatgtt cggtatgggt ttgacgctca aaccttccga cttcgatatt ttgttcaaac
      481 atcccaaagc cgtcatcatc ggcgtaatcg cacaattcgc cattatgccg gcaaccgcct
      541 ggctgctgtc caaactgttg aacctgcctg ccgaaatcgc ggtcggcgtg attttggtcg
      601 gctgctgccc gggcggtacg gcttccaatg tgatggccta tctggcgcgc ggcaatgtgg
      661 ctttgtcggt tgccgttacg tctgtttcca ccctgatttc cccattgctg actcccgcca
      721 tcttcctgat gcttgccggc gaaatgctgg aaatccaagc ggccggtatg ttgatgtcca
      781 tcgtcaaaat ggttttgctc cccattgttt tgggtttgat tgtccataag gttttgggca
      841 gtaaaaccga aaagctgacc gatgcgctgc cgctggtttc cgttgccgcc atcgtgctga
      901 ttatcggcgc ggttgttggg gcaagcaaag gcaagattat ggaaagcggc ctgctgattt
      961 ttgcggttgt cgtactccac aacggcatcg gctacctgct cggcttcttt gccgccaaat
     1021 ggaccggcct gccttatgat gcacaaaaaa cgctgaccat cgaagtcggt atgcaaaact
     1081 cgggcctggc cgccgcgctt gccgtcgcac actttgccgc cgcgccggtc gttgccgttc
     1141 cgggcgcatt gttcagcgtg tggcacaata tctccggctc gctgctggca acttattggg
     1201 cggccaaagc cggtaaacat aaaaaaccct aaacgccttt catcataatg ccgtctgaac
     1261 ggggcaaacg aaaccggcgg tttccgcccg accccttcag acggcctttg tttgaaatcg
     1321 gcggggacga ttgcccggct gctccggttc ggctgcctgc gttcgccccg ccttgcaaac
     1381 cgcctcactc ccttacataa accacttcga catcgtagtc gtcttcgttc caatcgtcat
     1441 cgtcgtccgc gccgaatttg tcctgccatt cctcttcatt gctcaaagac gaatccaaac
     1501 cggcttcaag acggaggaca gacaacaaat gatatatgtc gtccggaatc ggtgcctcaa
     1561 acgaaacggt ttcgccgctt tccggatggg taaaactcaa gcggtaggcg tgcaacgcct
     1621 gacgcgcacc caaactttta acggcttctt tcaccgtgtc gccgcacgga tggcgcgggt
     1681 tgccgtaaac cgggtcgccg gcaagcggat ggttggcctc acgcatatgg acgcggattt
     1741 ggtgcgtcct gcctgtttcg agcgaacatt cgatatagct gtgggcaaga tagcgttcca
     1801 acactttgac gtgggttacg gcaggcttgc cgccgaattt gacgactgcc attttcaggc
     1861 ggttgtgcgg atcgcgtccg atttgggttt cgattttacc gtcaaagggg acgatgccgt
     1921 tggcgacggc gcggtagatg cgtttgaccg tgcgttcttg aagctgcctc acgagggaat
     1981 tttgcgccga cagggttttg gcaaccacca tcagcccgct ggtttctttg tccaaacggt
     2041 gtacgatgcc cgcgcgcgga atttgggaca gctcgggaca gtgcgccaag agaccgttga
     2101 gcagggtacc gctccagttt cctgcggcag ggtggacgac cagtccggcc ggtttgttga
     2161 cgacgatgac ggtatcgtct tcgtaaacaa tatccaaagc cataggctct ggaacaaacg
     2221 ccagattttc ctcactcgga cggacggtta cacaaatttg ctcgccgcct atcattttgt
     2281 ctttgggttg cgaaggttta tcgtttacaa taaccgcgcc ttctttaatc catgatgtca
     2341 ggcggctgcg cgagtagtcg ggcagaagtt tcgctaatac cgcatccaac cgcccgccag
     2401 caagctcgag cggaacggtc agaccgatac ggttttcagt ttcggaagct gacgcaaagt
     2461 ctgaatcgtc gctataatcg gattcattat caaaggaagt attctgcatg aaaaaaattc
     2521 ttttaacggt ttcattaggt ttggcactga gtgcctgtgc cactcaaggt acggtcgata
     2581 aagatgccca gattacccaa gattggagtg tggagaagct ctatgccgaa gcccaggacg
     2641 agctgaacag cagcaattat acgcgggctg tcaaattata cgaaatcttg gaatcgcgct
     2701 tccctaccag ccgccatgcc cggcaatccc aactggatac ggcatacgcc tactataaag
     2761 atgatgagaa ggataaggcg ctggcggcaa tcgaacgctt ccgccgcctc catccgcagc
     2821 atccgaacat ggattacgcg ctgtatctgc gcggcttggt gctgttcaac gaagaccagt
     2881 ccttcttgaa caaactggcc tcgcaagact ggtccgaccg cgacccgaaa gccaaccgcg
     2941 aagcgtacca ggcgtttgcg gaactcgtcc aacgcttccc gaacagcaaa tacgccgccg
     3001 atgcaaccgc acgcatggtc aaactggtcg atgcactggg cggcaatgaa atgtcggtgg
     3061 cgcgctacta catgaaacgc ggcgcatata tcgccgccgc caaccgcgcc caaaaaatta
     3121 tcggcagcta tcaaaataca cgttatgtcg aagaatcgct cgccatattg gaacttgcct
     3181 accaaaaact cggcaaacca cagcttgccg ccgatacgcg ccgcgtgttg gaaaccaact
     3241 tcccgaaaag cccgtttttg acgcacgctt ggcagcccga cgatatgccc tggtggcgtt
     3301 actggcatta agcccatctt cgtaatgccg tctgaagccg tttcagacgg cattttatgt
     3361 ttcaaacctc attcaaacgg ttttttctgc caatagaatt tataccctct caaacgttga
     3421 gccttcacgc cgccgcgtcc caagccgaat tgcagtgcgc ccgacaaatc ggtacgcagc
     3481 agtttgatgc cgtgtgcgcg gacacggttc tgcaccgctt cggtcggatg tttgtaggcg
     3541 ttggcataac cgcttgaagc aacggcatat tcgggcgaga cggcattgag gaacacgccc
     3601 gacgaggacg tattgctgcc gtgatgtccc aacaccaaaa cctggctgta caggttgcct
     3661 ccatacttgc cgaccaggct ttcctcaccc ttcgtatcca aatcgcccgt taccagcagt
     3721 gccgcaccgc ccgccacaac acgcaaaaca caacttttcc cattatcatc gatgtttttg
     3781 cgttcagacg gcatcaaaaa ctcaaaatcc acgccgtccc attgccaacg ctgttccgca
     3841 caatgccgcg ccccctcata aaattccggc tgcccggcat aaatcccgcc gttcggtatc
     3901 ttgccgactg cctgaaaacc gccgtcgtgg tcgctgtcgt gatgcgacag aaccagcttg
     3961 tccaaacggc ggacacccgc cgcattcaaa ctcggcacaa tccccatctg cgccgccgct
     4021 gccgttccgg tgtcaaacaa aagatgatga tttgccgtct gaaccgacac cgacaaaccc
     4081 tgccccgcat cccaaaccgt aaccgcaacc tcattttccg gcacgccggg tgaacggtaa
     4141 aacacaaacc ctgccaacag caacaccgcc cacggacgca aacccaagcc gcgcggcagc
     4201 agcaacagca aagcggcaca caccgccaac accaacagcg gcaaaggtgc ggaggcaacg
     4261 gcaaactcgg gcgacacatc ggcaagccac accaaaaacc gcaaagtata ttccgccaaa
     4321 aatgccccca actgttgcaa aggcgcaaac ggcacgaccg aacccagcaa cgccagcggc
     4381 gtcaataccc aagaaaacca cggaattgcc accgcattga ccaaagggct gattaaaggc
     4441 agcgaagcaa acagataacc gagcaaaacc agcgacaaca ccgaagccgc ccactgcccg
     4501 cgcaaagcag tttgccgttt tccctcgtgc aaacgccccg agcacgccca tatcagggcc
     4561 gccaccaaac cgaaagacag ccaagtcccc acacccaaga ccgccgacgg gtcgaacagc
     4621 agcaccgccg ccaacgcctg ccaccacgtc gcccacgccg acaatcttcc cctgcgccaa
     4681 gcccacgcaa acgccgccaa catcaaaacg ctgcgctgcg tcggcacgga aaaaccggca
     4741 agcagcgcgt aaaacagcgc gcctgcacac cccgccgcca aaacccacgc gcgcggccgg
     4801 gcaggaaggc gcggggaaca ggcaagcagc cgcttcgcca gccacgcaaa cattaccgcc
     4861 accatcgtaa cgtgcaaacc cgaaatactg accaaatgcg tcagccccaa cggccggaac
     4921 gcctgccaca attcggggcg caatgccgac tgttcgccca cgctcaacgc gcgcatcagc
     4981 ccgatgccgt ctgaaagccc gccgtccgca tccgcctgct gccaattacg gctgatgcgg
     5041 ctgcgccaaa ccgcaatccc ccaaccgctt ccgccatgca gcaaaaccct gtccgcaccg
     5101 accgtccccg caccgcctat tccgttggat aatgcccacg cctcacggtt caaaccgcgc
     5161 aggttcaatt ccccgacgac agggtgcaca cgtgccgtta tccgccatct gctcccgacc
     5221 gcccattcgc gccgtttgta gtccgacagc agcaaatcaa acgtccgacc accgctgtcc
     5281 acagcctttg ccgcaaactg cacacgccgc ccgtccgacc tcggcatatc cgccacttcc
     5341 accgtcaacg gcacacctga aaccgcctcc gcccgccatt gcgaagacag tgccgcttcc
     5401 gttctgaata cgccgtaagc cgcgcccgcc aacacgcaca gcatcagacc ggcaaacgca
     5461 aaacgccttg caaacacagc aaaaaccgca aaagccgcca gccaaaacag ccaatgcggc
     5521 acgaccggca gcgcaaacga agccgccgcg ccgacaaccc aacacggcaa aaaccaacga
     5581 cggaacacgt ctccccaccc cagatatttc aaaaataaac ggataataaa gcaaatccga
     5641 aaaaccgtca taacaagatt tgaaaatgat atagtggttt aaatttaaat caggacaagg
     5701 cgacgaagcc gcagacagta caagcagtac gacaaggcga ggcaacgctg tactggtttt
     5761 tgttaaacca ctataagaat gcaaacgaaa agcctcagta ttatccaaga caacggcaaa
     5821 ctttccatcg tcattcccac gaacccacat ctcgtcatta ccacgaaccc acatctcgtc
     5881 attaccacga acccacatc
//
LOCUS       DAWKJW010000123         5824 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.123, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000123 DAWKJW010000000
VERSION     DAWKJW010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5824)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5824)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5824
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.123"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(279..386)
                     /locus_tag="WJJ54_001518"
                     /pseudo
     CDS             complement(279..386)
                     /locus_tag="WJJ54_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(432..1160)
                     /gene="pdxJ"
                     /locus_tag="WJJ54_001519"
     CDS             complement(432..1160)
                     /gene="pdxJ"
                     /locus_tag="WJJ54_001519"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEZ7342366.1"
                     /translation="MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLR
                     EDRRHIKDADVFAVKNAIRTRLNLEMALTEEMLENALKVMPEDVCIVPEKRQEITTEG
                     GLDVLAQQEKIAEFTKILTDAGIRVSLFIDADDRQIQAAYDVGAPVVELHTGAYADAR
                     SHAEQLKQFERLQNGAHFAGDLGLVVNAGHGLTIHNVTPIAQILAIRELNIGHSLIAQ
                     ALFLGLPEAVRQMKEAMFRARLLP"
     gene            complement(1184..1975)
                     /gene="recO"
                     /locus_tag="WJJ54_001520"
     CDS             complement(1184..1975)
                     /gene="recO"
                     /locus_tag="WJJ54_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEZ7342367.1"
                     /translation="MSEHRVNHEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSAR
                     KRQSELRGVLVSFVPVSASWYGSQELKTLHRAEWVGGWRQPQGRALFSGLYVNELVLK
                     LTAREDPMPELYDALAKVMEAVCREANHIADLRRFEWKLLNALGVAPDLHTDGTGGDI
                     LADKTYRLMPEEAVMPVCEDADALSHEAGAIVEGQSLIDLREGSFRTAESLQQALKIT
                     RLFIRHLLPEGLKSRQVLEQIRQFDRKETARETVPTSDGTASNAV"
     gene            complement(2009..3136)
                     /gene="pheA"
                     /locus_tag="WJJ54_001521"
     CDS             complement(2009..3136)
                     /gene="pheA"
                     /locus_tag="WJJ54_001521"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEZ7342368.1"
                     /translation="MLECTINYCSGEIMSQTIDELLLPHRNAIDTIDAEILRLLNERA
                     QHAHAIGELKGTGAVYRPEREVAVLRRIQDLNKGPLPDESVARLFREVMSECLAVERP
                     LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDNCFKQVETRQADYLVAPVENSTEG
                     SVGRTLDLLAVTALQACGEVVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGR
                     HLPNAERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTR
                     FLVMGHHETGASSSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWE
                     YLFFIDIEGHRQDAQIQTALERLGERASFVKVIGSYPTAVL"
     gene            complement(3175..4407)
                     /locus_tag="WJJ54_001522"
     CDS             complement(3175..4407)
                     /locus_tag="WJJ54_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEZ7342369.1"
                     /translation="MPSAHYPEMSEKLMAVLMAMLVTLMPFSIDAYLPAIPEMAQSLN
                     ADVHRIEQSLSLFMFGTAFGQVVGGSVSDIKGRKPVALTGLAVYCLAVAAIVFASSAE
                     QLLNLRVVQAFGAGMTVVIVGAMVRDYYSGRKAAQMFALIGIILMVVPLVAPMVGALL
                     QGLGGWQAIFVFLAAYSLVLLGLVQYFLPKPAVGGKIGRDVFGLVAGRFKRVLKTRAA
                     MGYLFFQAFSFGSMFAFLTESSFVYQQLYRVTPHQYAWAFALNIITMMFFNRVTAWRL
                     KTGVHPQSILLWGIVVQFAANLSQLAAVLFFGLPPFWLLVACVMFSVGTQGLVGANTQ
                     ACFMSYFKEEGGSANAVLGVFQSLIGAGVGMAATFLHDGSATVMAATMTASTSCGIAL
                     LWLCSHRAWKENGQSEYL"
     gene            complement(4927..5781)
                     /locus_tag="WJJ54_001523"
     CDS             complement(4927..5781)
                     /locus_tag="WJJ54_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEZ7342370.1"
                     /translation="MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALP
                     ACRRHVGKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFV
                     GHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMR
                     PTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGW
                     YAYWLWNKGMSRVPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV
                     AGRLSHQK"
BASE COUNT         1354 a         1671 c         1574 g         1225 t
ORIGIN      
        1 gcttcgtcgc cttgtcctga tttttgttaa tccactatat tacataatca tcgcctcaat
       61 atttaatatc ccaaaatata gatttaaaac catcgccttt gtggtttgtc agcattccta
      121 attgagatag aaagtcaaat aatttcttgt ttctccggct gccatcaaga tggtttagat
      181 taagacctcg aacaatacaa tacccaatac tctgtactgt attgtgaatt tcttctatca
      241 aactattatt gtttgcagat aaaatatact tttgattcat atagtgaatt aaatttaaac
      301 cagtacggcg ttggcttgcc ttgccgtact atttgtactg tctgcggctt cgccgccttg
      361 tcctgattta aatttaatcc actataacat atccctgtcg tgaaatgctg tctgaaaggg
      421 tttgcctgcc cttacggcag cagccttgcc ctgaacatcg cctccttcat ttggcgcacg
      481 gcttcgggca gtccgaggaa gagggcttgg gcaatcagcg aatgcccgat gttcagttcg
      541 cggatggcga ggatttgggc gatgggggta acgttgtgta tggtcagtcc gtgtccggcg
      601 ttgacgacca agcccaaatc gccggcaaaa tgcgcgccgt tttgcagacg ctcgaattgc
      661 ttgagttgtt cggcgtggct gcgcgcgtcg gcatacgcgc ctgtgtgcag ctcgacaacg
      721 ggcgcgccga catcataggc ggcttggatt tgcctgtcgt cggcatcgat aaacaaagac
      781 acgcgtatgc ccgcgtcggt caggattttg gtgaattcgg cgattttttc ctgttgcgcc
      841 aatacgtcca aaccgccttc ggtcgtgatt tcctgccgtt tttccggcac gatgcacacg
      901 tcttccggca tcactttaag cgcgttttcg agcatttctt ccgtcaacgc catttcaagg
      961 ttcaggcgcg tgcggatggc gtttttgaca gcaaacacgt ccgcgtcttt gatgtggcgg
     1021 cggtcttcgc gaaggtgcat ggtaatcagg tccgcaccgt gcgtttcggc aaccagtgcc
     1081 gcctccacgg ggctgggata agtcgtgccg cgcgcgttgc ggacggtggc gatgtggtcg
     1141 atgttgacac ctaaaagcat aatctttcct tttatttctg ccttcagacg gcatttgaag
     1201 ccgtgccgtc cgaagtcggg acggtttccc gggcggtttc tttgcggtca aactgccgta
     1261 tctgttccaa cacctgccgc gatttcagcc cttcgggcaa caggtggcgg ataaaaagcc
     1321 gtgtaatttt caatgcctgt tgcaggcttt cggcggtgcg gaaactgcct tcgcgcaaat
     1381 cgatcaggct ttgcccttcg acaattgcgc cggcttcgtg cgaaagcgcg tctgcgtcct
     1441 cgcatacggg catgaccgcc tcttcgggca tcagccggta ggttttgtcc gccaaaatat
     1501 cgccgcccgt gccgtcggtg tgcaaatcgg gggcaacgcc caaggcattg agcagcttcc
     1561 actcgaagcg gcgcaaatcg gcaatgtggt tggcttcacg acacaccgcc tccatcactt
     1621 ttgccaacgc gtcgtacagt tcgggcatcg gatcttcgcg cgcggtcagt ttcaacacca
     1681 gttcgttcac atacagaccg ctgaacaacg ccctgccctg cggctgccgc catccgccga
     1741 cccattcggc acggtgaagg gttttgagtt cctgactgcc gtaccacgac gcgctgacgg
     1801 gcacgaagga aaccagcacg ccgcgcaatt cgctctgccg cttgcgcgcg cttcttgcca
     1861 aaagtgccac acgcccgtaa cggcggctga aggcttcgac ccgcaggctg ctttcgcgcc
     1921 atggcgagga agccaacagg aagacgggtt cgtggttgac tcggtgttcg gacatcatgc
     1981 ctgaaatgcc gtctgaacgc tgctgccgct acaaaacggc ggtcgggtac gaaccgatga
     2041 ctttgacgaa cgaagcgcgt tcgcccaagc gttccaatgc cgtctgaatc tgcgcgtcct
     2101 ggcggtgtcc ttcgatgtcg atgaagaaca ggtattccca caaaacggat ttgctcggac
     2161 ggctctcaaa cttggtcatg gaaatacccg actcggtcag cggttgcagc agcgaggcaa
     2221 ccgcaccggc gcggttgggc gcggaaacgg ccagcgaagt cttgtcgctg ctgcttgcac
     2281 cggtttcgtg atgtcccatc accaagaagc gcgtggtgtt gttcggttcg tcttcgatgc
     2341 actcggcaac catatcgagt ccgtagattt ccgccgccgt gcgtccggcg atggcggcaa
     2401 ccgtaccgtc gtccgattcg gcaaccagtc ttgcggcttc ggcattgctg gacacggcaa
     2461 tccgttcggc gttgggcaag tgtctgccca accagtcgtt gcactgcgcc aacgcctgcg
     2521 cgtgggaaaa gactttggca atgccttcgg tgctgccgtt gtttttacgc aaaaggttgt
     2581 ggtggatgcg caaaacgact tcgccgcacg cctgcaacgc ggtaacggca agcaaatcca
     2641 acgtgcgccc gaccgagcct tcggtcgagt tttccacggg cgcgaccaga taatccgcct
     2701 gacgggtttc aacctgcttg aagcagttgt ctatggtcgg acacgccatg gtgtgcgcgg
     2761 cgtgtccgaa atgcttgatc gccgcctgct gggtaaacgt gccctgcggc cccagatagg
     2821 cgatggtcag cgggcgttct acggcgaggc actcgctcat cacttcccga aacaggcgtg
     2881 ctaccgattc gtcgggcagc gggcctttgt tcaaatcctg aatgcggcgc aacacggcga
     2941 cttcgcgttc gggacggtac actgcgcccg tgcctttcag ttcgccgatg gcgtgtgcgt
     3001 gttgcgcgcg ttcgttgagc aggcgcagga tttccgcatc aatggtgtcg atggcgttgc
     3061 ggtggggaag gaggagttcg tcgatagttt gggacataat ttcgcctgaa cagtaattta
     3121 tcgtgcattc taacatcaaa tgccgtctga aacggtttca gacggcattt tccgttaaag
     3181 gtattcgctt tgcccgtttt ctttccacgc acgatgcgag cagagccaca gaagcgcaat
     3241 gccgcaagag gtggacgcgg tcatcgttgc cgccatcacg gttgccgaac cgtcgtgcaa
     3301 gaaggtcgcc gccataccca cccccgcgcc gattaaagat tggaatacac ccaatacggc
     3361 gtttgcgctg ccgccctctt ctttgaaata ggacataaaa cacgcctgcg tgtttgcacc
     3421 gaccaagccc tgcgtaccga cggaaaacat cacgcacgcg accagcagcc aaaacggggg
     3481 caacccgaaa aacagcacgg cggcgagttg ggacaggttg gcggcaaact ggacgacaat
     3541 cccccatagc aggatgcttt gcggatgcac gccggttttg agccgccacg cggtaacgcg
     3601 gttgaaaaac atcatcgtga tgatgtttag tgcaaacgcc caagcgtatt gatgaggcgt
     3661 aacacggtaa agctgctggt acacgaagga agattcggtc agaaaggcga acatcgaacc
     3721 gaagctgaat gcctgaaaaa acagataacc catcgcggca cgggttttca atacgcgttt
     3781 gaaccgccca gccaccagcc cgaacacatc ccgtccgatt ttgccgccga cggcaggctt
     3841 gggcaggaaa tactgcacca aaccgagcag caccagcgaa tacgccgcca gaaaaacaaa
     3901 aatcgcctgc cagccaccca agccctgcaa cagtgcgccg accatgggtg cgaccagcgg
     3961 cacaaccatc aaaatgatgc cgataagggc aaacatctgg gcggctttgc gtccggaata
     4021 ataatcgcgc accattgcgc cgacgatgac cacagtcatg cccgcaccga atgcctgcac
     4081 aacgcgcagg ttgaggagct gttcggcact cgaagcaaat acgatggcgg caacggcaag
     4141 gcagtagacg gccagtccgg tcagcgcgac gggtttgcgc cctttgatgt cggacaccga
     4201 accgccgacc acctgtccga acgccgtgcc gaacataaac aaactcaggc tctgttcgat
     4261 gcggtggaca tccgcgttca gcgactgcgc catttcggga atcgcgggca ggtaggcatc
     4321 gatggaaaac ggcatcagcg taaccagcat cgccatcaaa accgccatca gtttttcgct
     4381 catttcagga taatgggcag aaggcataaa ttctcgtccg attcgcaaac aaaccgcccg
     4441 gcggcggaaa acacaatacg cggaaacgga aaattttaac acaccggcac aaacaggcgg
     4501 caacaaaagc cccggcaaaa ccggacgaac cggaacgata tagtggatta acaaaaacca
     4561 gtacagcgtt gccttgcctt agctcaaaga gaacgattct ctaaggtgct taagcaccaa
     4621 gtgaatcggt tccgtactat ctgtactgtc tgcggcttcg tcgtcttgtc ctgatttttg
     4681 ttaatccact ataaaatccc gtcattcccg cgcaggcgga aatccggaca tccaacgctg
     4741 cagcaatttg tcggaaataa ccgaaactca aaaaaccgga tgcccgcctg cgcgggaatg
     4801 acgacgcaaa gatggtcgtt atttcggata aatatccgtc ttttcgttcc ggatacccgc
     4861 tttcgcagga atggagatgg aaagatttca gcctattcgg caatcatcaa ataccgcttc
     4921 ccaactttat ttttgatgcg acagccggcc ggcaaccaag gtggcggcga tgacgacaaa
     4981 cacgcccaag gcggacacgg gcgacaggtg ttcgcccaaa atcaaaaccg ccagcagcac
     5041 gccgacgacg ggttcgagcg aaatcaacag tcccgaaaca ttggcaggaa cacggctcat
     5101 ccccttgttc cacagccaat aggcgtacca gccgcacccc aaacccaaat acagcagcga
     5161 caataccatc ccgacgctcc agtccacggt ataactttgc gccaaagcaa gcgaaaacgg
     5221 caggcacatc aacgatgcgg cggcaatgga aacagatgtg aatgccggtg cgccgatgcg
     5281 tgcaatcagc ctttgcgtcg gacgcatagc ggcacaaaag cccgcgcccg ccaacaacac
     5341 cagcaggcag ccgaaccagc cgacttcgcc gccctcttcc gcaccgcccg ccatcagcag
     5401 cgcgacaccg gcaaatgccg ccgcgccgca tatccagtgg taggcacgcg ctttgtcgtt
     5461 gaagaaaaag tgtccgacaa acaccatcag cagcggctcg agtccgacaa tgaccgatgc
     5521 gctggcggcg gaagtgtatt tcaacccgac aaactgaagc agcagggtca gcacatagtt
     5581 gacgaacgac acaatcagca acggcttcca ttcctcacgc ggaatcttgc cgacatgacg
     5641 gcggcaggcg ggcagtgcag gcagcgcagc aatcagcagg cgcacgccga ccatcaatgc
     5701 gggatcgatg ccgccataga catatttggc ggcaataaac gagctgctcc agataatcag
     5761 ggcaaggatt tggtaaaaca tagtgagtga taaagtcaga tggtcataca aaagtatagc
     5821 ggat
//
LOCUS       DAWKJW010000124         5817 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.124, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000124 DAWKJW010000000
VERSION     DAWKJW010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5817)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5817)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5817
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.124"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            20..403
                     /locus_tag="WJJ54_001524"
     CDS             20..403
                     /locus_tag="WJJ54_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HEZ7342371.1"
                     /translation="MEPSSYAAEKKGKGGIRRVINAFGYSIDGIAAAYRYEAAFRQVL
                     WLNVLLVCAAFFWVSETAVRLPLIIASFVSVIVELFNTAVEAAVDHTSTEKHELAKRA
                     KDAGSAAQLFAMLMLAAVWLSALFG"
     gene            518..991
                     /locus_tag="WJJ54_001525"
     CDS             518..991
                     /locus_tag="WJJ54_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEZ7342372.1"
                     /translation="MKKLLAAVMMAGLAGAVSAAGVHVEDGWARTTVEGMKIGGAFMK
                     IHNDEAKQDFLLGGSSPVADRVEVHTHINDNGVMRMREVEGGVPLEAKSVTELKPGSY
                     HVMFMGLKKQLKEGDKIPVTLKFKNAKAQTVQLEVKIAPMPAMNHGHHHGEAHQH"
     gene            1117..2220
                     /gene="mnmA"
                     /locus_tag="WJJ54_001526"
     CDS             1117..2220
                     /gene="mnmA"
                     /locus_tag="WJJ54_001526"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEZ7342373.1"
                     /translation="MNTTANTTNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWED
                     DDNDEYCSIKQDSFDAIAVADIIGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDV
                     LCNAEIKFKCFLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLK
                     PFQLERAIFPLGGLEKPEVRRLAAEFKLPTAAKKDSTGICFIGERPFREFLQKYLPTD
                     NGKMVTPEGKTVGEHVGLMFYTLGQRKGLGIGGAGEPWFVAAKDLTKNELIVVQGHDH
                     PLLYTRSLVMNDLSFTLPERPKAGRYTCKTRYRMADAPCELRYLDEETAELVFDEPQW
                     AVTPGQSAVLYDGDICLGGGIIQTTDKPVIITR"
     gene            2292..3962
                     /locus_tag="WJJ54_001527"
     CDS             2292..3962
                     /locus_tag="WJJ54_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEZ7342374.1"
                     /translation="MEKIWLDSYEKGVSAEIDITQYGSVSDVFCQSVKKFAGQPAFQN
                     MGKTLTYAETGKLATDFASYLQNVLKLPRGERVAIMLPNVLQYPIALFGILQAGLVAV
                     NTNPLYTPRELEHQLKDSGATAIIVLENFANTLELVLPRTQIKHVIVASVGEMFGLLK
                     GSLINFVIRKIKKMVPEYRIRETISFQTALKEGAKHVFQPVALNREDTALLQYTGGTT
                     GVAKGAVLSHGNICANMLQAKEWIKNQLREGKETVIAALPLYHIFALTVNLMIFANAG
                     SKIILITNPRDMKGFIGELKKQRVNVFIGVNTLFNAMVNRPDFAEVDFSGLRLTLGGG
                     MATQKAVAEKWKKITDTPIVEAYGLTEASPGVCCNPLNIESYSGSIGLPVSSTEVELR
                     DANGKEVPVGQPGELWVKGPQVMQGYWNRPEETAKAIDARGFLETGDIAVMDEKGWLK
                     LVDRKKDLVVVSGFNVYPNEIEEVIAHHGKVMEVACIGVPDEKTGEALKVFVVKKDPS
                     LTKEELIAFCRTELTAYKVPKNIEFRDELPKSNVGKILRRELRQSTGK"
     gene            4074..5708
                     /locus_tag="WJJ54_001528"
     CDS             4074..5708
                     /locus_tag="WJJ54_001528"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEZ7342375.1"
                     /translation="MTKFIFVTGGVVSSLGKGIAAASIAAILESRGLNVTMLKLDPYI
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDSTMTRRNSFSTGQVYENVIAKE
                     RRGDYLGGTVQVIPHITDEIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMR
                     SQLGRNNTLFAHLSYVPYIAAAGEIKTKPTQHTVKEMLSIGLQPDILICRMDRTMPAD
                     ERRKIALFCNVEERAIVGSYDVDSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWK
                     KIVHAIQNPKHTVKIAMVGKYVDLTESYKSLIEALKHAGIHTETDVQITFVDSESIEK
                     NNGDVSMLKDMDAILVPGGFGSRGVEGKIAAVRYARENNVPYLGICLGMQIALIEYAR
                     DVAGLKGANSTEFDLKCAAPVVALIDEWQTADGSVETRDESADLGGTMRLGAQEVELK
                     AGSLAAKIYGSGHIRERHRHRYEVNNNYVPQLEKAGLVIGGVSAGRERLVETIELPNH
                     PWFFACQFHPEFTSNPRKGHPLFTAFVKAALNNKKA"
BASE COUNT         1514 a         1592 c         1481 g         1230 t
ORIGIN      
        1 acattttgaa aggataccga tggaaccttc ttcttacgcg gcagaaaaaa aaggcaaagg
       61 cggcatcagg cgcgtcatta acgcattcgg ctattcgata gacggcatcg ccgccgccta
      121 ccgttacgaa gcggcattcc gtcaggtttt gtggctgaac gtactgctgg tgtgcgcggc
      181 atttttttgg gtttccgaaa ccgccgtccg cctgccgttg attatcgcgt cttttgtgtc
      241 ggtcattgtc gaactgttca acaccgccgt cgaagctgcc gtcgatcata cttcgaccga
      301 aaaacacgag ctggccaaac gcgccaaaga cgcaggttct gccgcacaat tgttcgcgat
      361 gctgatgttg gcggcggttt ggctgtctgc cctgttcggg taaaacgctt gcagcaggat
      421 ttgtaatcct ttaggattag tatgtggtat ttattattca cttaatccac tataagatta
      481 agcacattcc ccgtctgata ttataaggag cagaaagatg aaaaaattat tggcggccgt
      541 gatgatggca ggtttggcag gcgcggtttc cgccgccgga gtccacgttg aggacggctg
      601 ggcgcgcacc accgtcgaag gtatgaaaat aggcggcgcg ttcatgaaaa tccacaacga
      661 cgaagccaaa caagactttt tgctcggcgg aagcagcccc gttgccgacc gcgtcgaagt
      721 gcatacccac atcaacgaca acggcgtgat gcggatgcgc gaagtcgaag gcggcgtgcc
      781 tttggaggcg aaatccgtta ccgaactcaa gcctggcagc tatcacgtga tgtttatggg
      841 tttgaaaaaa caattaaaag agggcgacaa gattcccgtt accctgaaat ttaaaaacgc
      901 caaagcgcaa accgtccaac tggaagtcaa aatcgcgccg atgccggcaa tgaaccacgg
      961 tcatcaccac ggcgaagcgc atcagcacta atctgctgaa aatgtttgaa atgccgtctg
     1021 aaaaagcccg ggctttcaga cggcattttt atgcccgcct ttaaaatgtg ttaaaatccg
     1081 cctttaaaaa ccgccgtttc caaccatatt ctacgcatga atacgacagc aaacaccacc
     1141 aatatcatcg tcgggctctc cggcggtgtc gattcttccg taaccgccgc cctgctcaag
     1201 cagcagggtt atcaagtgcg cggtgtgttc atgcagaact gggaagacga cgacaacgac
     1261 gaatattgca gcatcaaaca ggattcgttc gatgccatcg ccgttgccga tattatcggc
     1321 atcgatatcg acatcgttaa tttcgccgcg caatataaag acaaagtctt tgcttatttt
     1381 cttcaggaat acagtgcggg gcgcacgccg aatcccgatg tgttgtgcaa cgccgaaatc
     1441 aaattcaaat gctttttgga ttacgccgta gggcagggcg cggataccat cgccaccgga
     1501 cactatgcgc gcaaagaagt ccgcaacggc gtgcattacc tgctcaaagg tttggatcga
     1561 aacaaagacc aaagctattt cctctaccgc ctcaagcctt tccaactcga gcgcgcgatt
     1621 tttccgttgg gcggtttgga aaaacccgaa gtccgccgcc ttgccgccga gttcaaactg
     1681 ccaaccgctg ccaaaaaaga cagcacgggc atctgcttca tcggcgaacg tccgtttcgc
     1741 gagttcctgc agaaatacct gccgaccgac aacggtaaaa tggttacgcc cgaagggaaa
     1801 accgtcggcg aacacgtcgg gctgatgttc tacacgctcg gacagcgcaa aggtttgggc
     1861 attggcggtg cgggcgaacc gtggtttgtt gcggctaaag atttgacgaa aaacgaactg
     1921 attgtcgtac aaggacacga ccatccgctg ctctataccc gcagccttgt gatgaacgat
     1981 ttgagtttca cgctgcccga acgcccgaaa gcagggcgtt atacctgtaa aacgcgttac
     2041 cgtatggcgg acgcgccttg tgagttgcgc tatttggatg aagaaaccgc cgagctggtg
     2101 tttgacgaac cgcaatgggc ggttacgccg ggccagtctg ccgtgctgta cgacggcgac
     2161 atctgtttgg gcggcggcat cattcaaacg accgacaagc ctgtcatcat cacacgataa
     2221 aacttatgcc gtctgaaaca gttttcagac ggcattgttc cgctcaattc cactttaaaa
     2281 gaccgatacc tatggaaaaa atctggttag acagttacga gaagggcgtc agtgccgaaa
     2341 tcgacatcac gcaatacggt tccgtcagcg atgtattttg ccaaagtgtc aagaaatttg
     2401 ccggccaacc tgcttttcaa aacatgggca agacgctgac ttatgccgaa accggcaaac
     2461 tggcaacaga ttttgcttct tatctgcaaa acgtcctgaa gctgccgcgc ggcgaacgtg
     2521 ttgccattat gctgcccaac gtattgcaat acccgattgc ccttttcggc attttgcagg
     2581 caggtttggt agcggtgaac accaatccgc tctatacccc gcgcgagctg gagcatcagt
     2641 tgaaagacag cggcgcgacc gccatcatcg ttttggaaaa tttcgccaac acgctggagc
     2701 tggtgctgcc gcgcacgcag atcaaacacg tcatcgtagc ctccgtcggc gaaatgttcg
     2761 ggctgcttaa aggttcgctg atcaatttcg tcatccggaa aatcaagaaa atggtgcccg
     2821 aataccgtat tcgggaaacc atttcctttc agacggcatt gaaagagggg gcgaagcacg
     2881 ttttccaacc tgtcgcatta aaccgcgaag ataccgcgct gttgcaatac acgggcggca
     2941 cgacaggtgt tgccaaaggg gcggtgctga gccacggcaa catctgcgcc aatatgcttc
     3001 aggcaaaaga atggattaaa aaccagttgc gtgagggcaa agaaaccgtt atcgccgccc
     3061 tgccgctgta tcatattttc gccttaaccg tgaatctgat gatttttgcc aatgccggct
     3121 cgaaaatcat cctgattacc aacccgcgcg atatgaaagg ctttatcgga gaactgaaaa
     3181 aacagcgggt taatgtattt atcggcgtga acacactgtt taacgcgatg gttaaccggc
     3241 ccgattttgc cgaagtcgat ttttcaggat tgcggctgac tttgggcggc ggtatggcga
     3301 cccaaaaagc cgttgccgaa aaatggaaaa aaatcaccga cacgcccatc gtcgaagcct
     3361 acggtctgac cgaagccagc cccggcgtgt gctgcaaccc cttaaacatc gaatcataca
     3421 gcggcagcat cggtttgccc gtctcgtcca ccgaagtcga actgcgcgac gcaaacggca
     3481 aagaagtccc cgtcgggcag ccgggcgaat tgtgggtaaa aggccctcaa gtgatgcaag
     3541 gctactggaa ccgccccgaa gaaaccgcca aagccataga cgcgcgcggc ttcttggaaa
     3601 ccggcgatat tgccgtcatg gacgaaaaag gctggttgaa gctggtcgat cgtaagaaag
     3661 acctcgtcgt tgtttccgga ttcaatgttt atccgaacga aatcgaggaa gtcatcgcgc
     3721 atcacggcaa agtgatggaa gtcgcctgta tcggcgttcc cgacgaaaaa accggagaag
     3781 ccctaaaagt atttgtcgtc aaaaaagacc cgtcattgac caaagaagaa cttatcgcct
     3841 tttgccgcac cgaattaacc gcatataaag taccgaaaaa tatcgaattc cgcgacgagt
     3901 tgcccaagtc caacgtcggc aaaatcctgc gccgcgagtt gcggcaaagt accgggaaat
     3961 aaagaaaaga tgccgtctga aaacagccgt ccaccgttca gacggcatcc gtccgtttgc
     4021 cagaaccgcg cgcttcacgt taaaatcacg cattccaaca tgggtattcc atcatgacca
     4081 aattcatttt cgtcaccggc ggcgttgtct cctcactggg taaaggtatc gccgccgctt
     4141 ctattgccgc catcctcgaa tcgcgcggct tgaacgttac catgctcaag ctcgatcctt
     4201 atatcaacgt cgatcccggc acgatgagcc cgttccaaca cggcgaagtg ttcgtcaccg
     4261 acgacggcgc ggaaaccgac ctcgacttgg gacactacga acgctttatc gattccacga
     4321 tgacccgccg caacagcttc agcacggggc aggtgtacga aaacgtcatc gccaaagaac
     4381 gacggggcga ctatttgggc ggcacggttc aagtcatccc gcacattacc gacgaaatca
     4441 aacgccgcat ccacgaaggc gcggcaggtt acgatgtggc gattgtcgaa atcggcggca
     4501 cggtcggcga catcgaatcg ctgccgtttt tggaagccat ccgccagatg cgaagccagt
     4561 tgggacgcaa caacaccctg ttcgcccact tgagctacgt cccctacatc gccgctgcag
     4621 gcgaaatcaa aaccaagccg acccagcaca ccgttaaaga aatgttgagc atcggtttgc
     4681 aacccgacat cctgatttgc cgtatggaca ggacaatgcc tgcggacgaa cgccgcaaaa
     4741 tcgccttgtt ctgcaacgtg gaagaacgcg cgattgtcgg cagctacgat gtggacagca
     4801 tctacgaatg ccccgaaatg ctgcacgacc aaggcatcga caacatcatt accgagcagt
     4861 tgcagcttaa tgtgcagcag gcggatttga ccgcgtggaa aaaaatcgtc cacgccatcc
     4921 aaaacccgaa acacaccgtc aaaatcgcca tggtcggcaa atacgtcgat ttgaccgagt
     4981 cctacaaatc gctgatcgaa gccttgaaac acgcaggcat tcacaccgaa accgacgtac
     5041 aaattacctt tgttgacagc gaaagcatcg agaaaaacaa cggcgacgtt tccatgctta
     5101 aagacatgga tgccatcctc gttcccggcg gttttggttc gcgcggcgtg gaaggcaaaa
     5161 tcgccgctgt gcgctatgcc cgcgaaaaca acgtgccata cttgggcatc tgcctcggta
     5221 tgcagattgc gctgatcgaa tacgcccgcg acgtggcagg tttgaaaggt gcgaattcca
     5281 ccgagttcga cctcaaatgc gccgcccccg tcgttgccct gattgacgaa tggcaaaccg
     5341 ccgacggcag cgtcgaaacc cgcgacgaat ccgccgattt gggcggcacc atgcgtttgg
     5401 gcgcgcaaga agtcgaattg aaagcaggca gcctcgccgc caaaatctac ggcagcggac
     5461 acatccgcga acgccaccgc caccgctacg aagtcaacaa caactatgtt cctcagttgg
     5521 aaaaagcagg cttggttatc ggcggcgtat ccgccggacg cgaacgcttg gtcgaaacca
     5581 tcgaactgcc gaaccatcct tggttcttcg cctgccagtt ccaccccgag tttacctcca
     5641 atccgcgcaa agggcatcct ttgttcaccg cgtttgtcaa agctgcgttg aacaataaaa
     5701 aagcctgata aagcgttact tgatgatcaa aatgccgtct gaaagcctga caaagacctt
     5761 cagacggcat tttcgcaagt cggggattat aaaagccatc aatttaattt ttatggt
//
LOCUS       DAWKJW010000125         5726 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.125, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000125 DAWKJW010000000
VERSION     DAWKJW010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5726
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.125"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            72..998
                     /gene="fabD"
                     /locus_tag="WJJ54_001529"
     CDS             72..998
                     /gene="fabD"
                     /locus_tag="WJJ54_001529"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEZ7342376.1"
                     /translation="MSFAFFFPGQGSQSLGMMNGFAEHAIVKNTFAEASAILGQDLWA
                     MINGSDAEIIGQTVNTQPIMLAAGVAVYRAYLEAGGKTPAAVAGHSLGEYTALVAAGA
                     LNFADAVKLVRLRAELMQSAVPQGVGAMAAILGLEDEQVKAICAEAAQGEVVEAVNFN
                     SPGQIVIAGNAAAVERAMTAAKEAGAKRALPLPVSVPSHCSLMKPAAEKLAEALKSVV
                     IKQPQIRVIHNADVAAYDDADKIKDALVRQLYSPVRWTETVNALVSDGITESAECGPG
                     KVLAGLAKRINKAAACSALTDAGQIAAFIEAH"
     gene            1136..3001
                     /gene="msbA"
                     /locus_tag="WJJ54_001530"
     CDS             1136..3001
                     /gene="msbA"
                     /locus_tag="WJJ54_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HEZ7342377.1"
                     /translation="MIEKLTFGLFKKEDARSFMRLMAYVRPYKIRIVAALIAIFGVAA
                     TESYLAAFIAPLINHGFSAPAAPPELSAAAGIISTLQNWREQFTYMVWGTENKIWTVP
                     LFLIILVVIRGICRFTSTYLMTWVSVMTISKIRKDMFAKMLTLSSRYHQETPSGTVLM
                     NMLNLTEQSVSNASDIFTVLTRDTMIVTGLTIVLLYLNWQLSLIVVLMFPLLSLLSRY
                     YRDRLKHVISDSQKSIGTMNNVIAETHQGHRVVKLFNGQAQAANRFDAINRTIVRLSK
                     KITQATAAHSPFSELIASIALAVVIFIALWQSQNGYTTIGEFMAFIVAMLQMYAPIKS
                     LANISIPMQTMFLAADGVCAFLDTPPEQDKGTLAPQRVEGRISFRNVDVEYRSDGIKA
                     LDGFNLDIRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDGIDIADIKLDCLR
                     AQFALVSQDVFLFDDTLFENVRYSRPDAGESEVLSALQAANLQSLIDASPLGLHQPIG
                     SNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGI
                     IVAHRLTTIEGADRIIVMDDGKIIEQGTHEQLMSQNGYYTMLRNISNKDAAVRTA"
     gene            3101..4666
                     /gene="guaA"
                     /locus_tag="WJJ54_001531"
     CDS             3101..4666
                     /gene="guaA"
                     /locus_tag="WJJ54_001531"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEZ7342378.1"
                     /translation="MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLDEIKA
                     FNPKGIILSGGPNSVYESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQRE
                     FGYAQVKTIDSGLTRGIQDDAPNTLDVWMSHGDKVSKLPDGFAVIGDTPSCPIAMMEN
                     TEKQFYGIQFHPEVTHTKQGRALLNRFVLDICGAQPGWTMPNYIEEAVAKIREQVGSD
                     EVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVI
                     HVDAEGQFMAKLAGVTDPEKKRKIIGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIES
                     AGAKTKKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHP
                     FPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPV
                     KSVGVMGDGRTYDYVVALRAVITSDFMTAHWAELPYSLLGRVSNRIINEVKGINRVVY
                     DVSGKPPATIEWE"
     gene            4728..5474
                     /gene="fabG"
                     /locus_tag="WJJ54_001532"
     CDS             4728..5474
                     /gene="fabG"
                     /locus_tag="WJJ54_001532"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HEZ7342379.1"
                     /translation="MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKVIGTATSESG
                     AAAISERLAQWGGEGRVLNSAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRM
                     KEEEWDDIMQVNLKSVFRASKAVLRGMMKQRAGRIINITSVVGVMGNAGQTNYAAAKA
                     GLIGFSKSMAREVGSRGITVNCVAPGFIDTDMTRALPEETRQAFTAQTALGRFGDAQD
                     IADAVLFLASDQAKYITGQTLHVNGGMLMP"
BASE COUNT         1387 a         1859 c         1382 g         1098 t
ORIGIN      
        1 ttttgtcccg cctgaatttt tcgtaaaact cgggcagaat acctgattat ccaaccaaac
       61 aaaggaatac tatgtctttt gccttctttt ttcccggaca aggttcccaa agcctcggta
      121 tgatgaacgg ctttgccgaa cacgccatcg tcaaaaacac ctttgccgaa gcctccgcca
      181 tattggggca ggacttgtgg gcgatgatta acggcagcga tgccgaaatc atcggacaaa
      241 ccgtcaatac ccagcccatc atgctcgccg ccggcgttgc cgtttaccgc gcctatttag
      301 aagcgggcgg caaaacgcct gccgccgttg ccggacacag cctcggcgaa tacaccgcac
      361 tcgttgccgc cggcgcattg aattttgccg acgcggtcaa actcgtgcgc ctgcgcgccg
      421 aactgatgca gtccgccgta ccgcaaggcg tgggcgcaat ggcggcgatt ctcggcttgg
      481 aagatgagca ggttaaagcc atttgcgccg aagccgccca aggcgaagtg gtcgaagccg
      541 tcaacttcaa ctcacccgga caaatcgtga ttgcaggcaa cgccgccgcc gtcgagcgcg
      601 ccatgaccgc cgccaaagaa gccggtgcca aacgcgccct gccgctgccc gtgtccgtac
      661 cttcccattg cagcctgatg aaacccgccg ccgaaaaact tgccgaagcc ctgaaatcgg
      721 ttgtaatcaa acagccgcaa atccgcgtta tccacaacgc cgacgttgcc gcctacgatg
      781 atgccgacaa aatcaaagac gcgctcgtcc gccagcttta cagccccgta cgctggacgg
      841 aaaccgtcaa cgcccttgtt tcagacggca tcaccgaatc cgccgaatgc ggcccgggca
      901 aagttctggc aggtttggca aaacgcatca acaaagccgc cgcgtgcagc gcgctgaccg
      961 atgccggaca gattgccgcc tttatcgaag cacactgact tcgttccgca aaaagcagcc
     1021 tgccctcttc aggctgcttt tcacgtccga acggcggcag ccccgtattt acgctataat
     1081 ccatcccgac caaaccaccg acagcggctg ccgttgcagt tcccgcccta ccgatatgat
     1141 agaaaaactg actttcggac tgtttaaaaa agaagacgcg cgcagcttta tgcgcctgat
     1201 ggcgtacgtc cgcccctaca aaatccgcat cgttgccgcc ctgattgcca ttttcggcgt
     1261 tgccgccacc gaaagctacc ttgccgcctt catcgccccc ctgattaacc acggcttttc
     1321 cgcacctgcc gcgccgcccg agctgtctgc cgccgccggc atcatttcca ccctgcaaaa
     1381 ctggcgcgaa cagtttacct atatggtttg ggggacggaa aacaaaatct ggaccgtccc
     1441 gctcttcctc atcatcctcg tcgtcatccg tggcatctgc cgctttacca gcacctatct
     1501 gatgacttgg gtctccgtga tgaccatcag caaaatccgc aaagatatgt ttgccaaaat
     1561 gctgaccctt tcctcccgct accatcagga aacgccgtcc ggcaccgtac tgatgaatat
     1621 gctcaacctg accgaacagt cggtcagtaa cgccagcgac atcttcaccg tcctcacgcg
     1681 cgacacgatg atcgttaccg gcctgaccat cgtcctgctt tacctcaact ggcagctcag
     1741 cctcatcgtc gtcctgatgt tccccctgct ctccctgctc tcgcgctact accgcgaccg
     1801 tctgaaacac gtcatttccg actcgcaaaa aagcataggc acgatgaaca acgtgattgc
     1861 cgaaacccat cagggacacc gcgtcgtcaa gctgttcaac gggcaggcgc aggcggcaaa
     1921 ccggttcgac gcgatcaacc gcaccatcgt ccgcctcagc aaaaaaatca cgcaggcaac
     1981 ggcggcacat tccccgttca gcgaactaat cgcctcgatc gccctcgccg tcgtcatctt
     2041 catcgccctg tggcaaagcc aaaacggcta caccaccatc ggcgaattta tggcattcat
     2101 cgtcgcgatg ctgcaaatgt acgcccccat caaaagcctt gccaacatta gcatccctat
     2161 gcagacgatg ttcctcgccg ccgacggcgt atgtgcattt ctcgacaccc cgcccgaaca
     2221 ggacaaaggc acgctcgcac cgcagcgtgt cgaagggcgc atcagcttcc gcaacgtcga
     2281 tgtcgaatac cgttcggacg gcatcaaagc cctcgacggc ttcaacctcg acatcagaca
     2341 aggcgaacgc gtcgccctgg tcggacgttc cggcagcggc aaatccaccg tcgtcaacct
     2401 gctgccccgc tttgtcgaac cgtctgccgg caacatctgc atagacggta tcgacatcgc
     2461 cgacatcaaa ctcgactgcc tgcgcgccca attcgccctc gtctcccaag acgtattcct
     2521 gtttgacgac accctgtttg aaaacgtccg ctacagccgt cccgacgcgg gcgaatccga
     2581 agtcctatcc gccctccaag ccgctaacct gcaaagcctg atcgacgcat caccgctcgg
     2641 actgcaccag cccatcggat cgaacggcag caacttatcc ggcggacagc ggcaacgcgt
     2701 cgccattgcc cgcgccattt tgaaagacgc gccgatatta ttattggacg aagccaccag
     2761 cgcattagac aacgaatccg aacgcctcgt ccaacaagcg ctcgaacgcc tgatggaaaa
     2821 ccgcaccggc atcatcgtcg cccaccgcct gaccaccatc gaaggggccg accgcatcat
     2881 cgtaatggac gacggcaaaa tcatcgaaca aggcacacac gaacaactga tgtcccaaaa
     2941 cggctactac acgatgttac gcaatatctc aaacaaagat gccgccgtcc ggacggcata
     3001 aacaaaatgc cgtctgaaat ggtacaatcg ctccgacccc ttcagacggc atcatatccg
     3061 ccgacccatc cgattatctt caatcaccgt aaaacccatt atgacccaag acaaaatcct
     3121 catcctcgac ttcggttctc aagttaccca gctgattgcc cgccgcgtgc gcgaagccca
     3181 cgtttactgc gaactgcatt ccttcgatat gcctttggac gaaatcaaag ccttcaaccc
     3241 caaaggcatc atcctctccg gcggccccaa ttccgtttac gaatccgact atcaagccga
     3301 taccggcatc tttgatttgg gcattccggt tttgggcatc tgctacggaa tgcagtttat
     3361 ggcgcaccac ttgggcggcg aagtgcagcc cggcaaccag cgcgaattcg gttatgcgca
     3421 agttaaaacc atagacagcg gactgacacg cggcattcaa gacgacgcgc ccaacacact
     3481 cgacgtatgg atgagccacg gcgacaaagt gtccaaactg cccgacggtt tcgccgtcat
     3541 cggcgacact ccgtcctgcc cgattgccat gatggaaaac accgaaaaac aattctacgg
     3601 catccagttc caccccgaag ttacccacac caaacaaggt cgcgccctgt tgaaccgctt
     3661 tgtcttggac atctgcggcg cgcaaccggg ctggacgatg ccgaactaca tcgaagaagc
     3721 cgttgccaaa atccgcgaac aggtcggcag cgacgaagtg attttaggtt tgtccggcgg
     3781 cgtggactct tccgtagcgg ccgcgctgat tcaccgtgcc atcggcgacc aactgacctg
     3841 cgtgttcgtc gatcacggtt tgttgcgcct gaacgaaggc aaaatggtga tggatatgtt
     3901 cgcccgcaac ttgggtgtga aagtgattca cgtcgatgcc gaagggcagt ttatggcgaa
     3961 actcgccggc gtgaccgacc ccgagaaaaa acgcaaaatc atcggcgcgg aatttatcga
     4021 agtatttgat gccgaagaga aaaaactcac caacgccaaa tggctggcgc aaggcacgat
     4081 ttaccctgac gtaatcgaat ccgcaggcgc gaaaaccaaa aaagcccacg ccatcaaatc
     4141 gcaccacaat gtcggcggcc tgcctgaaaa catgaagctc aagctgcttg agcctttgcg
     4201 cgacttgttt aaagacgaag tgcgcgaact gggcgttgct ttgggtctgc cgcgcgaaat
     4261 ggtgtaccgc catccgttcc ccggccccgg tttgggcgtg cgcatcttgg gcgaagtgaa
     4321 aaaagaatac gccgacttat tgcgtcaagc agacgatatt ttcatccaag aattacgcaa
     4381 caccaccgac gaaaacggca catcttggta cgacctgacc agccaggcat ttgccgtatt
     4441 cctgcctgtg aaatccgtcg gcgtaatggg cgacggacgc acttacgact acgtcgtcgc
     4501 actgcgcgca gtcatcacca gcgacttcat gaccgcacac tgggcagaac tgccttactc
     4561 actgctcgga cgcgtgtcca accgcatcat caacgaagtc aaaggcatca accgcgtggt
     4621 gtacgatgtc agcggcaaac cgcctgccac catcgagtgg gaataaccag caaacagggc
     4681 tgcaccgtcc ggcgcagtct ttcgattatc ggaaaaaagg aaaaaatatg agcacacaag
     4741 atttaagcgg caaaatcgct ttggtaaccg gcgcatcgcg cggtatcggt gcagcaattg
     4801 ccgacacact ggcggcagcc ggtgccaaag tcatcggtac ggcgaccagt gagagcggtg
     4861 cggcggcgat tagcgagcgg ttggcgcaat ggggcggcga aggccgcgta ttaaattccg
     4921 ccgaacccga aaccgtcgaa aacctgattg ccgacatcga aaaaacgttc ggcaaactcg
     4981 atattctggt caacaacgcc ggcatcaccc gcgacaacct cctgatgcgc atgaaagaag
     5041 aagagtggga cgacatcatg caggtcaacc tcaaatccgt gttccgcgct tctaaagccg
     5101 tcttgcgcgg catgatgaag cagcgcgccg gccgtatcat caacatcaca tccgtcgtcg
     5161 gcgtgatggg caatgccggt caaaccaact atgccgcggc aaaagcaggc ttaatcggtt
     5221 tctccaaatc catggcgcgc gaagtcggca gccggggcat taccgtcaac tgcgtcgccc
     5281 ccggctttat cgataccgat atgacccgcg ccctgccgga agaaacccgc caagccttta
     5341 ccgcccaaac cgccttgggc agattcggcg acgcgcaaga cattgccgat gcggttttgt
     5401 tcctcgcttc cgatcaggcg aaatacatta ccggccagac gctgcacgtc aacggcggca
     5461 tgctgatgcc ctgacggaca gccgtgccga caatgccgtc tgaagccctt tcagacggca
     5521 tttgcattcc caaacaaaat gaacacacac cacaccctgc cctgcccctg cggttcaggc
     5581 acaagctgag acctttgcaa aactcctttc cctcccgaca gccgaaaccc aaacacaggt
     5641 tttcgtctat tttcgcccca aatatctcct aattttaccc aaataccccc ttaatcctcc
     5701 ccggataccc gataatcaag catccg
//
LOCUS       DAWKJW010000126         5658 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.126, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000126 DAWKJW010000000
VERSION     DAWKJW010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5658
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.126"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            98..814
                     /locus_tag="WJJ54_001533"
     CDS             98..814
                     /locus_tag="WJJ54_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEZ7342380.1"
                     /translation="MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLL
                     PGKKLTESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNA
                     RIEMETMILNILADLPDLETRLKPLYAMIRREEEASGRGDRVGWNRLSNAFHVELARL
                     VGNDVLFDIMNTLCARSSLIVAVAGVHREEKHAINTHTHSEHREILDLLLAGRRNRVV
                     KILRRHLGNCMERLEKTLED"
     gene            963..1865
                     /locus_tag="WJJ54_001534"
     CDS             963..1865
                     /locus_tag="WJJ54_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HEZ7342381.1"
                     /translation="MDSLMTLLSVLIPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLL
                     IGVSLSRVEDLGSRLDDMALTVLWLFVCTVGANLLALAVLGKLFPWRIKGKGKGVSVG
                     VSGSVGQLGCVLLGFAFGKLMRDIWMPSESAGMYCLMLLVFLIGVQLKSSGVSLRQVL
                     VNRRGIRLSVWFMLSSLSGGLLFAASADGVSWTKGLAMASGFGWYSLSGLVMTEAYGA
                     VWGSIMLLNDLARELFALAFIPLLMKRFPDAAVGVGGATSMDFTLPVIQGAGGLEVVP
                     VAVSFGVVVNIAAPFLMVVFSALG"
     gene            1908..2681
                     /locus_tag="WJJ54_001535"
     CDS             1908..2681
                     /locus_tag="WJJ54_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEZ7342382.1"
                     /translation="MKPKIQRHGEILSLVRRHQFMSVDELAAALDVTPQTIRRDIREL
                     EEAGSLKRHHGGASSGGNLPEGLPADRQTRCQNEKNAIARLIAEHIPDGSSLFVSIGT
                     TMEAVASELVRRRGSLRIITNNIHVASIVSARTDYTVIITSGVVRPLDGGITGVATVD
                     FINQFKVDYAVMSTHGVESDGSLLDDDYKEVSVMQAMIANARVRFLGVDHSKFRSNAL
                     VRLGDITAFDKVFTDRLPDTAMQKMLKEAGVECLIADAV"
     gene            2793..4481
                     /locus_tag="WJJ54_001536"
     CDS             2793..4481
                     /locus_tag="WJJ54_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HEZ7342383.1"
                     /translation="MLNKDQFADNHFIRTFIEEDLKSGKHEAVQTRFPPEPNGYLHIG
                     HAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFAS
                     NYFDQLYDYAVGLVKDGKAYVDDLTPEEMREYRGTLTEAGKNSPYRDRSIEENLDLFT
                     RMKNGEFPDGSKTLRLKIDMASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHC
                     ISDAIEGITHSLCTLEFEAHRPLYDWVLDNIPAPHATRPRQYEFSRLELLYTITSKRK
                     LNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAGISKSENIVDMSVLEGA
                     IREELENSAPRLMAVLNPLKVTLTNFETGRTQSRRAAFHPNHEEMGDREVPVSQTIYI
                     EADDFAENPPKGFKRLIPGGEVRLRHGYVIKCDEVVKDEAGNVVELKCSIDHDTLGKN
                     PEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPDAVRGEDGEYLPFTDFLNPESVK
                     EITAYAEPAAKDLPAESRWQFERIGYFVTDRKDHGKDTPVFNRTVTLKDSWQPK"
     gene            4574..5530
                     /gene="gshB"
                     /locus_tag="WJJ54_001537"
     CDS             4574..5530
                     /gene="gshB"
                     /locus_tag="WJJ54_001537"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HEZ7342384.1"
                     /translation="MKVLFIADPMASFKTYKDTTYAMMREMAKRGWRLFHTLSSGLSV
                     KNGLVVADASAFEFLGAQDDHDKNWFAAADKVQTALKAFDAVIMRTDPPFDMQYLYAT
                     QLLTLAEQQGAKVFNSGQAMRDFNEKLAILNFSRFTAPTLVTTRSADVRAFLKEHGDI
                     IIKPLDGMGGMGIFRLTEKDPNIGSILETLMRLDSRTIMAQRYIPEIVHGDKRILIIG
                     GEVVPYALARIPQNGETRGNLAAGGRGVAQELDGRDREIAETLAPELKRRGILLAGLD
                     VIGSNLTEVNVTSPTGFQEIMKQKGFDVAAMFADAVAAWSVR"
BASE COUNT         1300 a         1545 c         1573 g         1240 t
ORIGIN      
        1 aatttgtgca atgctttaat tcctctgaca cgatttgaaa cacagccgcc ttaaaacatc
       61 ttaaaaaatt tgaaagcgta aaaatacgga aaacatcatg aactttgaaa acgacgacat
      121 tatccatgcg ccgaccacgt cttccctgat tctcgaagag cggcacgatt cggagctgtt
      181 ccgtgtttac gccctgattt tggacggcat taccgatcag gtgctgctgc ccggcaaaaa
      241 gctgaccgaa tccgaacttt gccgtcagat ggtgtgttcg cgcaacaccg tccgcggcgc
      301 gctgtcgctt ttggcgcacg acaagattgt cgatttgcaa cccaacaggg gcgcgttcgt
      361 ccacgttccc gatttgaaag aaatgcagga tgtgttcaat gcgcgcatcg aaatggagac
      421 gatgattttg aatatcctcg cagatttgcc ggatttggaa acgcgcctca agccgcttta
      481 tgcgatgata cggcgcgaag aagaggcctc cggcaggggc gaccgcgttg gctggaaccg
      541 cctgtccaat gccttccacg tcgaactggc gcgcctggtg ggcaacgatg tgctgttcga
      601 cattatgaac acgctgtgcg cgcggtcttc cctgattgtc gccgtggcgg gcgtgcatcg
      661 cgaggaaaaa cacgccatca atacgcatac gcattccgaa caccgcgaaa tcctcgacct
      721 gctgctggcg ggcaggcgca accgcgtggt caaaatcctg cgccgccatt tgggcaactg
      781 tatggagcgt ttggaaaaga ctttggaaga ttgaatgccg gagcggataa gccgcctgaa
      841 ccttcaggcg gttttttaat ggcgaacctg atgccgtctg aaatatggat gcgggtatct
      901 gcaattttca gacggcaatt tttaaaccgc atatatcatg cggcaataaa ggaggtcagg
      961 agatggacag cctgatgacg ttgctttcgg tattgatacc gatgtttgcc ggatttttta
     1021 tccgtgtgcc caagccttac ctgcccgctt tggataaggt gctatcggtc ttggtgtatg
     1081 ctgtgctgct gctgatcggc gtctcgttgt cgcgcgtgga ggatttgggt tcgcggttgg
     1141 acgatatggc gttgacggtt ctgtggctgt ttgtttgtac ggtcggggcg aacctgcttg
     1201 ctttggcagt gttgggaaag ttattcccgt ggcggataaa ggggaaaggg aagggcgttt
     1261 cggtcggcgt gtcgggcagt gtggggcagc tcggatgcgt gctgctcgga tttgcattcg
     1321 gcaaactgat gcgcgatatt tggatgccgt ctgaaagcgc gggcatgtat tgtctgatgc
     1381 tgctggtgtt cctcatcggc gtacagctca aaagcagcgg cgtatcgttg cggcaggttt
     1441 tggtcaaccg caggggtatt cggttgtcgg tctggtttat gctttcatct ctttcgggcg
     1501 ggctgctgtt tgccgcatcg gcagacggcg tgtcgtggac gaaaggtttg gcgatggctt
     1561 ccggcttcgg ttggtattcc ctctcgggtt tggtcatgac cgaggcttac ggcgcggtat
     1621 ggggcagcat catgctgctg aacgatttgg cacgagagct gtttgcactg gcatttatcc
     1681 cgctgctgat gaagcgtttt ccggatgcgg cggtgggggt tggcggtgcg accagtatgg
     1741 attttacatt gcccgtgatt cagggtgcgg gcggtttgga agtcgtgccg gtagcggtca
     1801 gcttcggcgt ggtggtcaat atcgccgccc cgtttctgat ggtggtgttt tccgctttgg
     1861 gttgaacgcg gtaaaatcgg catcccgatg caaggaggca gaaaacgatg aaaccgaaaa
     1921 tccaaaggca cggagagatt ttaagccttg tccgccggca tcagtttatg tcggtggacg
     1981 agcttgccgc cgcattggac gttaccccgc agacgatacg ccgcgacatc cgcgagttgg
     2041 aggaggccgg cagcctgaaa cgccatcacg gcggcgcatc ttcgggcgga aacttgccgg
     2101 agggcctgcc cgccgaccgc caaacccggt gtcaaaacga aaaaaacgcc attgcccggc
     2161 tgattgcgga acacatcccc gacggttcgt cgctgtttgt cagtatcggc acgacgatgg
     2221 aagccgtggc atcggagctg gtcaggcggc gcggcagcct gcggattatt accaacaata
     2281 tccacgtcgc ctccatcgtt tcggcgcgga cggattacac ggtcattatc acttccggag
     2341 tcgtccgccc tttggacggc ggtattaccg gcgtggcaac cgtcgatttt atcaaccagt
     2401 tcaaagtcga ttatgccgtg atgagtacgc acggcgtgga aagcgacggt tcgcttttgg
     2461 acgacgacta caaagaagtc agcgtgatgc aggcgatgat tgccaatgcg cgcgtccgct
     2521 tcctcggcgt ggaccacagt aaattccgca gcaacgcgct ggtcaggctc ggcgacatta
     2581 cggcgtttga caaagtattt accgaccggc tgcccgatac cgcgatgcag aagatgctga
     2641 aagaggcggg ggtggaatgc ctgattgccg atgccgtctg aacgctatgt caaagcgcgc
     2701 aagtcgggta caataaacac atcatcaaac cgcttcagac ggcataagga accgccccaa
     2761 tgccgtctga agccatctgt tcaaagaaaa ctatgctcaa taaagaccaa tttgcggaca
     2821 accattttat ccgcaccttc atcgaagaag acctcaaaag cggcaaacac gaagccgtcc
     2881 aaacccgttt tccgccggag cccaacggct acctgcacat cggacacgcc aaatccatct
     2941 gcctgaactt cggtttggcg tatatttacg acggcttgtg caacctgcgt tttgacgata
     3001 ccaaccccga aaaagaaaac gacgaatacg tcaacgccat caaagaagac gttgagtggc
     3061 tcggtttcca ttgggcgggc gagccgcgtt tcgcttccaa ctatttcgac cagctttatg
     3121 actacgccgt cggtttggtt aaagacggca aagcgtatgt cgatgatttg acgccagaag
     3181 aaatgcgcga ataccgcggt acgctgaccg aagcaggcaa aaacagccct tatcgcgacc
     3241 gcagtatcga agaaaacctc gacctgttca cgcgcatgaa aaacggtgag ttccccgacg
     3301 gcagcaaaac cctgcgcctg aaaatcgaca tggcatccgg caacatcaat atgcgcgatc
     3361 cggtcatcta ccgcatccgc cgcgcccatc accacaacac cggcgacaaa tggtgcatct
     3421 atccgatgta cgactacacg cattgtattt ccgatgccat cgaaggcatc acgcattcct
     3481 tgtgtacgct cgaatttgaa gcccatcgtc cgctgtatga ctgggtgttg gacaacatcc
     3541 ccgcgccgca cgccacacgt ccgcgccaat acgagttttc acgcttggag cttttgtaca
     3601 ccattacctc caaacggaaa ttgaatcagt tggttgtgga aaaacacgtt tccggctggg
     3661 acgatccgcg tatgccgacc atttccggta tgcgccgacg cggctacacg cccgaagggc
     3721 tgcgcctgtt tgccaaacgc gccggtattt ccaaatctga aaacatcgtc gatatgagcg
     3781 tgttggaagg cgcgattcgc gaagagttgg aaaattccgc cccacgcctg atggcggtgt
     3841 tgaacccgct caaagtaacc ctgaccaact ttgaaaccgg cagaacccaa agccgccgtg
     3901 ccgcgttcca tccgaaccac gaagaaatgg gcgatcgcga agtacctgtt tcacaaacca
     3961 tttacatcga agccgacgac tttgccgaaa atccgcccaa aggcttcaaa cgcctgattc
     4021 ccggcggcga agtacgcttg cgccacggct atgtcatcaa gtgcgatgaa gtcgtcaaag
     4081 acgaagcagg caatgtggtt gaactcaaat gcagcatcga ccacgacacc ttgggcaaaa
     4141 atccagaagg ccgtaaagtt aaaggcgtga ttcattgggt ttccgccgaa cacgccgccg
     4201 aaatcaaagt ccgtctgtac gaccgcctct ttaccgtcga gcgtcccgat gccgtgcgcg
     4261 gcgaagacgg cgaatacctg ccgttcaccg atttcctcaa tccggaatcc gtcaaggaaa
     4321 tcaccgccta cgccgaacct gccgccaaag atttgccggc agaaagccgt tggcagttcg
     4381 agcgtatcgg ctacttcgta accgaccgta aagaccacgg caaagacacg ccggtgttta
     4441 accgcacggt cacgctgaaa gattcttggc agcctaagta aaaccccatc cttgccgtct
     4501 gaatattgtt cggacggcat ttcccctttg cccgcgaaat gcggcacatt cggcacaccg
     4561 gaaaggaaat atgatgaaag tcctctttat cgccgacccg atggcaagtt tcaaaaccta
     4621 caaagacacc acctacgcca tgatgcgcga gatggcaaaa cgcggctggc ggctgtttca
     4681 taccttgagc agcggattgt cggttaaaaa cggtctggtg gttgctgatg cgtctgcttt
     4741 tgagtttctc ggcgcacaag acgaccacga caaaaactgg tttgccgccg ccgacaaagt
     4801 tcagacggca ttgaaagcat ttgatgccgt gattatgcgt accgatccgc cgttcgatat
     4861 gcaatacctc tacgccacac agcttctgac gctggcggag cagcagggcg cgaaggtctt
     4921 taacagcgga caggcgatgc gtgatttcaa tgaaaaactg gcgattttga acttcagccg
     4981 ctttaccgcg cccacgctgg taacgacccg ttccgccgat gtccgcgcat ttttgaaaga
     5041 acacggcgac atcatcatta aaccgctcga cggcatgggc ggtatgggca tcttccgcct
     5101 gaccgaaaaa gaccccaaca tcggcagcat cctcgaaacc ctgatgcggc ttgattcccg
     5161 caccattatg gcgcaacgct acattcccga aatcgtacac ggtgacaaac gcatcctgat
     5221 tatcggcggc gaagtcgtcc cctatgcttt ggcgcgtatc ccgcaaaacg gcgaaacacg
     5281 cggcaacctt gcggcaggcg gacgcggcgt ggcgcaggaa ttggacggac gcgaccgcga
     5341 aattgccgaa acgctcgccc ccgaactcaa acggcgcggc atcctgctgg ccggtttgga
     5401 cgttatcggc agcaacctga ccgaagtcaa cgtaaccagc ccgaccggat tccaagaaat
     5461 tatgaaacaa aaaggtttcg acgtggcggc aatgtttgcc gatgccgttg ccgcgtggtc
     5521 ggtacgttaa accgatgccg tttgaaaggc ttttgcttca caaccgtttg gtttgttcgg
     5581 gcaggcaggg ttttccctca gccggcaggg atgcggttaa tgccgtacgg acaccccgcc
     5641 gccccgtttt cagacggt
//
LOCUS       DAWKJW010000127         5603 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.127, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000127 DAWKJW010000000
VERSION     DAWKJW010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5603
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.127"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..77)
                     /locus_tag="WJJ54_001538"
     CDS             complement(<1..77)
                     /locus_tag="WJJ54_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ7342385.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTART"
     gene            complement(383..1642)
                     /gene="rho"
                     /locus_tag="WJJ54_001539"
     CDS             complement(383..1642)
                     /gene="rho"
                     /locus_tag="WJJ54_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEZ7342386.1"
                     /translation="MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMK
                     KGEGFTCSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVR
                     VPKDNERYFALVRLDTINGDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGR
                     AIDLISPIGKGQRALLVAPPKSGKTVMLQNIAHAVTANYPEVELIVLLIDERPEEVTE
                     MSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNT
                     VVPTSGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSRMDDVIYEE
                     FKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDE
                     IEAAEFLIGKIKASKNNDDFFELMRGK"
     gene            complement(1862..4246)
                     /gene="ppsA"
                     /locus_tag="WJJ54_001540"
     CDS             complement(1862..4246)
                     /gene="ppsA"
                     /locus_tag="WJJ54_001540"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HEZ7342387.1"
                     /translation="MADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGG
                     FATTADAYRAFLAHNGLSERISAALAKLDVEDVAELARVGKEIRQWILDTPFPEQLDA
                     EIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLENVKEAMHH
                     VFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVF
                     VTSSYGLGENVVQGAVNPDEFYVFKPTLKAGKPAILRKTMGSKHIKMIFTDKAEAGKS
                     VTNVDVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQAR
                     PETVKSQEEGNRNLRRFAINGDKTVLCEGRAIGQKVGQGKVRLIKDASEMDSVEAGDV
                     LVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLKNGQE
                     VTVSCAEGDTGFIYAGLLDVQITDVALDNMPKAPVKVMMNVGNPELAFSFANLPSEGI
                     GLARMEFIINRQIGIHPKALLEFDKQDDELKAEITRRIAGYASPVDFYVDKIAEGVAT
                     LAASVYPRKTIVRMSDFKSNEYANLVGGSVYEPHEENPMLGFRGAARYVADNFKDCFA
                     LECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCEL
                     PSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAIS
                     ACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDTVIETWLYLANELNK"
     gene            4657..5478
                     /locus_tag="WJJ54_001541"
     CDS             4657..5478
                     /locus_tag="WJJ54_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HEZ7342388.1"
                     /translation="MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDT
                     PEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKE
                     LNTEATASEQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
                     TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQER
                     RPNSTYAKIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF"
BASE COUNT         1180 a         1314 c         1636 g         1473 t
ORIGIN      
        1 gttcttgcag ttacacctgc gacaaacagt tcaatgagtt tattttgttt ataccggctt
       61 agacgacttt ttctcataaa ggcaactcta acttaatttg aatttcccta gttatctagg
      121 acagccccaa atttatacaa aaatgagcgc ggttcggcgc aaccttgaat caagttcccg
      181 catcggtttt cattgccggt acggatgcgt tcaagccggc tttgcaaagg ccgcgctttc
      241 ggcaagcgga cacggacact gccgacggtt gcgccgttaa cggggggagg gaggagctgc
      301 gccgaccgtg tgaatgaaag tgccgtctga aacccgattt tcaggcttca gacggcattt
      361 cgcattaatg cgggcggcgc gtttatttgc cgcgcatcag ctcgaagaaa tcgtcgttgt
      421 ttttagaggc tttgattttt ccgattaaaa attcggctgc ctcgatttca tccatcgggt
      481 gcaggaactt gcgtaagagc cacatacgtt gcaactggtc gttcggcaca agcagctctt
      541 cgcggcgcgt gccggatttg ttgatgttga tggcggggaa gaggcgtttt tccgccatac
      601 ggcggtcgag gtgcaattcc atattgccgg tgcctttgaa ttcttcgtaa atcacatcgt
      661 ccatacggct gccggtttca accaatgctg tggcaatgat ggtcagcgaa ccgccttctt
      721 ccacgttgcg cgccgcgccg aagaaacgtt tgggacggtg cagtgcgttg gcatcgacac
      781 cgccggttag gattttgccc gaggtaggca cgacggtatt gtaggcgcgg gcaaggcggg
      841 taatcgaatc aagcaggatg accacgtctt ttttgtgttc caccatacgc ttggcttttt
      901 caagtaccat ttcggcaact tggacgtggc gttgcgccgg ctcgtcaaat gttgaagaaa
      961 ccacttcacc tcggacggaa cggctcattt cggttacttc ttcgggacgc tcgtcaatca
     1021 agaggacgat gagttcgact tcgggatagt ttgcggtaac ggcgtgggca atgttttgca
     1081 gcatcacggt tttaccgctt ttgggcgggg caaccaagag ggcgcgctga cctttgccga
     1141 tgggggaaat caggtcgatg gcgcgtccgg tcaggttttc ttcggacttt aagtcgcgtt
     1201 ccagcttcaa ctgttcggtc ggaaacagcg gggtcaggtt ttcaaacagg attttatggc
     1261 ggcatacttc cgggtggtcg ccgttgatgg tatcaagcct gaccagggca aaatagcgtt
     1321 cgttgtcttt tgggacgcgc acgcttcctt cgatggtgtc gcccgtatgc aggttgaagc
     1381 ggcggatttg ggtgggcgag acatagatgt cgtcggggcc ggcaagatag gacgtgtccg
     1441 cgctgcggag gaagccgaag ccgtcgggca ggatttcaag cgtgccggag caggtgaaac
     1501 cctcgccttt tttcatcatc tggcggacga tggcaaatac gaggtcttgt ttgcggaatc
     1561 ggttggcgtt ttcgatgccg tgttcttccg ccaattctaa gagtttggaa atgtgcaggg
     1621 tttgtaattc ggagacgtgc ataataatga tgtattttga agaggaaaaa gacaggcaga
     1681 tgccgtctga aagaagaagc tgaccgttgc cggttgctcg gggaaggggg aattgtaggc
     1741 agtcggcgcg tgggtgtcaa atattatcgc ggacggggca tcggcaggaa atgccgtctg
     1801 agcggagctg cttggaaaaa aatacccccg cgcttttcag gctcgggggt atgggcattg
     1861 attatttgtt caattcattc gccaaatata gccaagtttc gatgacggta tccgggttca
     1921 gggaaacgct ttcgatacct tcctcaacca gccatttggc gaagtccgga tggtcggacg
     1981 ggccttgacc gcagatgccg acatatttgt tctgcttgcg gcaggcggag atggcaaggt
     2041 gcagcatcac tttgacggca gggttgcgtt cgtcaaacga ttcggatacc aagccgctgt
     2101 cgcggtcgag accgagggtc agttgggtca tgtcgttcga gccgatggag aagccgtcga
     2161 agtattgcag gaattgttcc gccaataccg cgttgctcgg cagttcgcac atcataatca
     2221 ggcgcaggcc gtttttgccg cgttccaagc cgttttcttt cagggctttg acaacggctt
     2281 cggcctcgcc caaggtgcgt acgaacggaa tcatgatttc aacgttggtc agccccattt
     2341 cgtcgcggac gcgtttcaag gctttgcatt cgagggcgaa gcagtctttg aaattgtcgg
     2401 cgacataacg cgctgcgccg cggaagccca gcatcgggtt ttcttcgtgc ggttcgtata
     2461 cgctgccgcc gaccaggttg gcgtattcgt tggatttgaa gtcggacata cggacgatgg
     2521 ttttacgcgg ataaaccgat gcggccaatg tcgccacgcc ttcggcgatt ttatcgacgt
     2581 agaagtcgac aggggacgcg taaccggcga tacggcgggt aatttccgct tttaattcgt
     2641 catcttgttt gtcaaattcc aacaaggctt tcgggtggat accgatttgg cggttgatga
     2701 taaattccat acgcgccaag ccgatgcctt cgctgggcag gttggcgaag ctgaatgcga
     2761 gttcggggtt gccgacgttc atcatgactt tgacgggtgc tttgggcata ttgtccaagg
     2821 cgacatcggt gatctgtacg tccaacaggc cggcatagat gaagccggta tcgccttcgg
     2881 cacaggatac ggtaacttct tgaccgtttt tcagcaattc ggttgcattg ccgcagccga
     2941 caacggcagg aatacccagt tcgcgcgcga tgatggcggc gtggcaggta cgtccgcccc
     3001 tgttggtcac gatggcggaa gcgcgtttca tcaccggttc ccaatccggg tcggtcatat
     3061 cggtaacgag tacgtcgccg gcttcgacgg aatccatctc ggaagcatct ttaatcaggc
     3121 gtaccttgcc ctgtccgact ttctgaccga tggcgcggcc ttcgcataat acggttttgt
     3181 cgccgttgat ggcgaagcgg cgcaggttgc ggttgccctc ttcttgggat tttacggttt
     3241 cgggacgggc ttgcaggatg tagagtttgc cgtccaagcc gtcgcgtccc cattcgatat
     3301 ccatcgggcg gccgtagtgt ttttcgatgg tcagtgcgta atgcgccaac tcggtgattt
     3361 cttcgtcggt aatggagaag cggttgcggt cttcttcggg gacatcgacg ttggttaccg
     3421 atttgccggc ttcggctttg tcggtaaaaa tcattttgat gtgtttcgaa cccatggttt
     3481 tacgcaggat ggcgggcttg cccgctttga gcgtgggttt gaacacataa aattcgtccg
     3541 ggttgaccgc accttgtacg acgttttcgc ccagaccgta agaggaggta acaaagacga
     3601 cttgatcgta gccggattcg gtgtcgaggg tgaacatcac acctgatgcg ccgctgtcgg
     3661 aacgcaccat gcgttgaacg ccggcggaaa gggcgacgat gtcgtgttcg aagcctttgt
     3721 ggacgcggta ggaaatggcg cggtcgttgt acagggaggc gaatacatgg tgcatcgctt
     3781 ctttaacgtt ttccaatccg ttgatattca agaaggtttc ctgttggccg gcaaatgatg
     3841 cgtcgggcag gtcttcggcg gttgcggaag agcgtacggc gacggaaatg tccgcgcctc
     3901 cggcatcggc gaccattttg ttccatgccg cttcgatttc ggcatcgagc tgttcgggga
     3961 aaggcgtgtc caaaatccat tggcggattt ctttgccgac gcgtgccagt tcggcaacgt
     4021 cttcgacatc taattttgcc agtgcggcgg aaatgcgttc gctcagaccg ttgtgtgcga
     4081 ggaatgcgcg gtaggcatcg gctgtggtgg caaagccgcc ggggacgcga acgccttttt
     4141 cggtcagctg actgatcatt tcgcccagcg aggcgttttt accgcccacg cgttcaacat
     4201 ctgtcatacg caggttttca aaccagatta cgtagttgtc ggccatttgt gtgtccaatc
     4261 caaaatatgt taaaaaagaa acaaatccgc gtgcttattt taagcgattc gttcctctgc
     4321 tgtcatgtgt tttatccgtt ttaaaatcat gatgccgtct gaaaaattgc ggtttcggcg
     4381 tgtgtagcgg tttgaaactt gcagccggta tacttctttt tttgggtatt ttctttgtaa
     4441 aacaggtggt ttgaataggt taatgttttt tctgtttgat ttttttgttt attttttaaa
     4501 attttctgcc aaaaaatact ttatataaat aattttattt caaaattata ttgtgtctgt
     4561 ttgggtgtaa tccgaggtag gcgtgctgcg ggtgctttcc ttgtgtctgc cgctgctgtt
     4621 atgatgatat ttttattctg tatttaagga tggaagatga gcagtccgcg ccatgtgttt
     4681 tacatttccg accgtaccgg tctgactgcc gagaatatcg gcgaggcttt gctgaaccag
     4741 tttggcaatc tgtcgttcaa acgccatacg catccgtttg tcgatacgcc ggaaaaggcg
     4801 cgcgcggtgg tggagaaggt caatcggagc cggcaggaaa acggtcagcg tccgattgcg
     4861 tttgtcagtg tggttgatga cgaaatccgt cggattatca aaggggcgga tgcttttcag
     4921 attaatttct ttgagacttt tttgggactg ttggagaaag aactcaatac cgaagccacg
     4981 gcatccgagc aggggcatca cagtatcggt aatacgaagc gttacgatgc gcgtatggag
     5041 gcggtaaatt tctcattgaa ccacgatgac ggggtcagcg ataagaacct tcaggaagcg
     5101 gatgtaatct tgatgggtgt atcgcgttcg ggcaaaacgc cgacctgcct ttacctcgcc
     5161 ctgcaatacg gcatccgtgc ggcaaactat ccgctgattc ccgacgattt ggaatcggcc
     5221 gatctgccgc gtatggtcaa gccttatagg gataagctgt tcgggttgac catccagccg
     5281 gaacgtttgc aggccatccg ccaagagcgc cgcccgaatt caacttatgc caaaatcgat
     5341 acatgccgca gcgaggtggc ggacgcgcag agtatgttca gacggcatgg cattccgttt
     5401 gcgaatacga cggataaatc agtggaagag cttgccgtac acatccttca ggcgtgcaag
     5461 ctcaaacgca ggttttgacg ggctttgatt cggtttgaag gcggaaatgc cgtctgaaat
     5521 caggtttcag acggcagttt tatagtggat taacaaaaat caggacaagg cgacgaagcc
     5581 gcagacagta caaatagtac gga
//
LOCUS       DAWKJW010000128         5500 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.128, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000128 DAWKJW010000000
VERSION     DAWKJW010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5500)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5500)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5500
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.128"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(254..2050)
                     /locus_tag="WJJ54_001542"
     CDS             complement(254..2050)
                     /locus_tag="WJJ54_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEZ7342389.1"
                     /translation="MNTVSNYLSALREAMKAQGLDALVIPSADPHLSEYLPEHWQARR
                     ELSGFTGSVGTFVVTADEAGVWVDSRYWEQAAKQLAGSGIVLQKSGQVPPYNEWLAAS
                     LPENAAVGIPSDMVSLTGKRTLAQSLAAKNIRIEHPDNLLNQVWTNRPALPAETVFIH
                     DPDYVSETAAEKLARVRAVMAEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSFLL
                     IGKDNAVLFTDRCRLNAEAAAALQTAGITVEPYAQVAGKLAQIGGALLIEPNKTAVST
                     LVRLPESVRLIEGTNPSTLFKSCKSEADIARIREAMEHDGAALCGFFAEFEDIIGNGG
                     SLTEIDVDTMLYRHRSVRPGFISLSFDTIAGFNANGALPHYSATPESHSTISGNGLLL
                     IDSGAQYKGGTTDITRVVPVGTPTAEQKRDNTLVLKAHIALAEAVFPENIPSPLIDAI
                     CRKPLWQAQCDYGHGTGHGVGYFLNVHEGPQRIAFAAPATPETAMKKGMVTSIEPGLY
                     RPGKWGIRIENLAANQAVAAPQETEFGSFLCFETLTLCPIDTRLMDTALMTDGEIDWV
                     NRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR"
     gene            2106..2447
                     /locus_tag="WJJ54_001543"
     CDS             2106..2447
                     /locus_tag="WJJ54_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342390.1"
                     /translation="MPSEKHNHLIKSPACCKTDGLIGWCVFARKKRCKVVCCKILGIK
                     YRFIPFFGSNMENIVKFEHEVLIVCVGRYLDYVTIRAFIKISLPGGILFLKTVGFGFV
                     WGQSRPNWSNR"
     gene            2508..3761
                     /locus_tag="WJJ54_001544"
     CDS             2508..3761
                     /locus_tag="WJJ54_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEZ7342391.1"
                     /translation="MSEQHISTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGW
                     QIALIIILTNLFKYPFFRFSAHYTLDTGKSLIEGYAEKSRVYLWVFLILCILSATINA
                     GAVAIVTAAIVKMAIPSLMFDVGTVAALIMASCLIILVSGRYRALDRVSKIIIVTLSI
                     ATLAAAGIAMSRGMQMQPDFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEK
                     QRINPSEYRDGIFDFNVGYIASAVLALVFLALGAFVQYGNGEAVQMAGGKYIGQLINM
                     YAVTIGGWSRPLVAFIAFACMYGTTITVVDGYARAIAEPVRLLRGKDKTGNAEFFAWN
                     IWVAGSGLAVIFWFDGVMANLLKFAMIAAFVSAPVFAWLNYRLVKGDEKHKLTSGMNA
                     LALAGLIYLTGFTVLFLLNLAGMFK"
     gene            3916..5427
                     /gene="lysS"
                     /locus_tag="WJJ54_001545"
     CDS             3916..5427
                     /gene="lysS"
                     /locus_tag="WJJ54_001545"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEZ7342392.1"
                     /translation="MSEQNHPQTEPQLDENQIIALRREKLHNIRQQRNAYPNDFKRDS
                     FAADLHAQYGEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNK
                     GVSQEVLDDFNHWDLGDIVGAEGTLFKTNHGELTVRVSGIRLLSKSLRPLPDKHKGLS
                     DQETKYRQRYVDLIVNEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGAT
                     AKPFVTHHNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTM
                     IEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKK
                     YNPHYTDEQLNDAEWLKKEIVKHGESLPPSLVIGSLQLALFEGCAEGKLWNPTFIVDY
                     PVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAERFKAQVAQKDAGD
                     DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFPQMRPE"
BASE COUNT         1198 a         1397 c         1599 g         1306 t
ORIGIN      
        1 cggaatatag cggattaaca aaaaccagta cggcgttgtc gcgccttagc tcaaagagaa
       61 cgattctctc aggtgctgaa gcaccgagtg aatcggttcc gtactattcg tactgtctgc
      121 ggcttcgtcg ccttgtcctg atttttgtta atccactata tttgcttgcg gcaagatgaa
      181 aacggtgcgg gatgttttgg gaaaccaatg ccgtctgaag ggctttcaga cggcattttt
      241 tgcgccgtgc tgtttaacgc gccagcggtt cggtgcgttt gatcagccac gcttttgccg
      301 cgccttcggt cagcggctcg aggcggcggc ggacttcggc gtggtagcgg ttgacccagt
      361 cgatttcgcc gtcggtcatg agggcggtgt ccatcaggcg ggtgtcgatg gggcagaggg
      421 tcagggtttc aaaacagagg aagctgccga attcggtttc ttgaggggcg gcgacggctt
      481 ggttggcggc aaggttttca atgcggatgc cccattttcc cgggcggtag agtccgggtt
      541 cgatggaggt aaccatgcct tttttcatgg cggtttcggg cgtggcgggg gcggcgaagg
      601 cgatgcgctg cgggccttcg tggacgttga ggaaatagcc tacgccgtgt ccggtgccgt
      661 ggccgtagtc gcattgcgcc tgccacaggg gtttgcggca aatcgcatca atcagcggcg
      721 aggggatgtt ttctgggaac acggcttcgg caagcgcgat atgggctttg agaacgaggg
      781 tgttgtcgcg tttttgttcg gcggtgggtg tgccgacagg gacgacgcgg gtgatgtcgg
      841 tcgtgccgcc tttgtattgc gcgccggagt cgatgagcaa aagcccgttg ccgctgatgg
      901 tgctgtggct ttcgggcgtt gcgctgtaat gcggcagtgc gccgttggcg ttgaagcctg
      961 cgatggtgtc gaaactcaat gaaatgaagc ctgggcgcac gctgcggtgg cgataaagca
     1021 tggtgtccac gtcgatttcg gtcaggctgc cgccgttgcc gatgatgtct tcaaactcgg
     1081 cgaagaaacc gcacaacgcc gcgccgtcgt gttccatcgc ttcgcggatg cgggcgatgt
     1141 cggcttcgga tttgcaggat ttgaacagcg tggacgggtt ggtgccttca atcaggcgca
     1201 cgctttcggg caggcgcaca agggtgctga cggcggtttt attcggctcg atgagcagcg
     1261 cgccgccgat ttgagcgagt ttgccggcaa cttgggcgta aggctcgacc gtgatgcctg
     1321 cggtttgcag cgcggcggcg gcttcggcgt tcagacggca tcggtcggta aacaggacgg
     1381 cgttgtcttt gccaatcagc aggaaggaca cgaaaacggg attgaaaggc acgtcgctgc
     1441 cgcgcaggtt ggtcagccag gcgatgtcgt caagcgagga aaccaagtgg taatccgcgc
     1501 ctttttccgc catcacggcg cgcacgcggg cgagtttttc ggcggcggtt tcagaaacat
     1561 agtcggggtc gtggatgaac accgtttcgg cggggagggc ggggcggttt gtccacactt
     1621 gattcagtaa attatccggg tgttcgatgc ggatgttttt ggcggcgagt gattgcgcca
     1681 aagtgcgttt gccggtgagc gagaccatat cggaagggat gccgacggcg gcgttttcgg
     1741 gcaggcttgc cgcgagccat tcgttgtacg gcggcacttg cccgcttttt tgcagcacaa
     1801 tgccgctgcc cgcaagctgt ttggcggctt gttcccaata gcggctgtcc acccacacgc
     1861 ccgcttcatc ggcggtaacg acgaatgtgc cgaccgagcc ggtaaagccc gacaattcgc
     1921 ggcgcgcctg ccaatgctcg ggcaggtatt cggacaggtg ggggtcggcg gaagggatga
     1981 cgagtgcatc caagccttgc gccttcatgg cttcgcgcaa tgcggacagg taattcgata
     2041 cggtattcat aacagttcct ccaatcgggt tttgcggctt cagatggcat ggacggaaat
     2101 ctgaaatgcc gtctgaaaaa cataaccatc ttatcaaatc gccagcctgc tgcaaaacag
     2161 acgggctgat cggatggtgc gtgtttgcgc gaaaaaagcg atgtaaggtt gtttgttgta
     2221 aaattttagg cataaaatat cgttttattc ctttttttgg aagtaatatg gaaaatatag
     2281 tcaagtttga gcatgaagtt ctaatagtgt gtgttggcag gtatttggat tacgttacaa
     2341 tacgtgcttt catcaaaatt tccctaccgg gcggtatcct gtttttgaag acggtaggat
     2401 ttgggtttgt ttgggggcaa tcccgcccaa attggagcaa tagatagggc tgtgtccgaa
     2461 tatgcggctc tgtgtgttga aacacagtta aaaatacgga agactttatg tccgaacaac
     2521 atatttcgac ttggaaaagt aaaatcaacg cattgggtcc cgggatcatg atggcttcgg
     2581 cggcggtcgg cggttcgcac ctgattgcct cgacgcaggc gggcgcgctt tacggctggc
     2641 agatcgcgct catcatcatc ctgaccaacc tcttcaaata cccgtttttc cgcttcagcg
     2701 cgcattacac gctggacacg ggcaagagcc tgattgaagg ttatgccgag aaaagccgcg
     2761 tttatttgtg ggtattcctg attttgtgca tcctctccgc cacgattaac gcgggcgcgg
     2821 tcgccattgt aaccgccgcc atcgtcaaaa tggcgattcc ctcgctgatg tttgatgtcg
     2881 gcacggttgc cgccttgatt atggcatcct gcctgattat tttggtgagc ggacgttacc
     2941 gcgctttgga tcgcgtttcc aaaatcatca tcgttacttt gagtatcgcc acgcttgccg
     3001 ccgccggcat cgctatgtcg cgcggtatgc agatgcagcc cgattttatc gagccgacac
     3061 cgtggacgct tgccggtttg ggcttcctga tcgcgctgat gggctggatg cccgcgccga
     3121 ttgaaatttc cgccatcaat tctttgtggg taaccgaaaa acaacgcatc aatccttccg
     3181 aataccgcga cgggattttt gatttcaacg tcggttatat cgccagtgcg gttttggctt
     3241 tggttttcct tgcactgggt gcgtttgtgc aatacggcaa cggcgaagca gtgcagatgg
     3301 cgggcggcaa atatatcggg caattgatca atatgtacgc cgttaccatc ggcggctggt
     3361 cgcgcccgct ggtggcgttt atcgcgtttg cctgtatgta cggcacgacg attaccgttg
     3421 tggacggcta tgcccgtgcc attgccgaac ccgtgcgcct gctgcgcgga aaagacaaaa
     3481 cgggcaacgc cgaattcttt gcctggaata tttgggtggc gggcagcggt ttggcggtga
     3541 ttttttggtt tgacggcgta atggcgaatc tgctcaaatt tgcgatgatt gctgcttttg
     3601 tgtccgcccc tgtgtttgcc tggctgaatt accgtttggt caaaggtgat gaaaaacaca
     3661 aactcacatc aggtatgaat gcccttgcat tggcaggctt gatttatctg accggtttta
     3721 ccgttttgtt cttattgaat ttggcgggaa tgttcaaatg ataacgatgc cgtctgaaac
     3781 cgcaaaccgc tttcagacgg cattgccgcg tttatggaaa aaaacaccga catcgcgtaa
     3841 aatatgcgca aattttgtga ttcggtcagg tcgtctgaaa cagattgcgc ctgatttatt
     3901 ttttcggaaa accctatgag cgaacaaaac catccgcaaa ccgagccgca gttggacgaa
     3961 aaccaaatca tcgccctgcg ccgcgaaaaa ctgcacaaca tccgccaaca gcgcaacgcc
     4021 tatcccaacg acttcaaacg cgacagcttc gccgccgatt tgcacgccca atacggcgaa
     4081 atcggcaaag aagaactcga tccgcaaggc attcccgtca aagtggccgg ccgcatgatg
     4141 ctcaaacggc aaatgggcaa ggcgagtttt gccaccattc aagacgtgtc cgggcaaatc
     4201 cagctttatc tgaacaacaa aggcgtgagc caagaagttt tggacgactt caaccattgg
     4261 gatttgggcg acatcgtcgg cgcggaaggc actttgttca aaaccaacca cggcgaactg
     4321 accgtacgcg tgtccggcat ccgcctgctg tccaaatccc tgcgtccgct gcccgacaaa
     4381 cataaaggtt tgagcgatca ggaaaccaaa taccgccaac gctatgttga tttgattgtc
     4441 aatgaagaat cgcgcaatac ctttatcaaa cgcagccaaa tcatccaatc cgtgcgtaat
     4501 tttatggtgg gcgagcatta tctcgaagtc gaaaccccga tgatgcaccc gattcccggc
     4561 ggcgcgacgg caaaaccctt cgttacccat cacaatgcct tagatattcc gctttacctg
     4621 cgtatcgcgc ctgagctgta tttgaaacgc ctggttgtcg gcggcttgga acgcgtgttt
     4681 gaaatcaacc gcagcttccg caacgaaggt atgtctgtgc gccacaatcc cgaattcacc
     4741 atgattgaat tctacgaagc cttctccgac tacgaacgca tgatgcagat ggcggaagac
     4801 atcatcagaa acgcatcgcg cacagtaaac ggtacggcaa acatcactta caacggcaaa
     4861 gaagtcgatt tggaaagccc gtttgagcgt ctgaccatcc tcgaagccat caaaaaatac
     4921 aatccgcact acaccgacga gcagttgaac gatgcggaat ggctgaaaaa agaaatcgtc
     4981 aaacacggcg aaagcctgcc gccgtccctg gtcatcggca gcctgcaact cgcgctgttt
     5041 gaaggttgcg ccgagggcaa gctgtggaac ccgaccttca tcgtcgatta cccggtcgaa
     5101 gtttcaccgt tggcgcgcgc ttcggatacc aaacaaggtc tgaccgaacg tttcgaattg
     5161 ttcgttgtcg gccgcgaact ggcaaacggc tattccgagt tgaacgaccc cgaagaccaa
     5221 gccgaacgct tcaaagcgca agtggcgcaa aaagacgcgg gcgacgacga agcgatgcac
     5281 tacgatgccg actacatccg cgcgatggag ttcggtctgc cgccgacagg cggttgcggc
     5341 atcggtatcg accgcttagt gatgctgctg accgattcgc aaaccatccg cgatgtgatt
     5401 ctgtttccgc agatgcgtcc cgagtaatca taaaaacagt tgaaatagaa atgccgtctg
     5461 aacccgattg gattcagacg gcattttgta tggcaggatt
//
LOCUS       DAWKJW010000129         5475 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.129, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000129 DAWKJW010000000
VERSION     DAWKJW010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5475)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5475)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5475
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.129"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(103..2928)
                     /gene="lbpA"
                     /locus_tag="WJJ54_001546"
                     /gene_synonym="tbpA"
     CDS             complement(103..2928)
                     /gene="lbpA"
                     /locus_tag="WJJ54_001546"
                     /gene_synonym="tbpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin-binding protein LbpA"
                     /protein_id="HEZ7342393.1"
                     /translation="MNKKHSFPLTLTALAIATAFPSYAANSETAAQTQSLKEVTVRAA
                     KVGRRSKEATGLGKIVKTSETLNKEQVLGIRDLTRYDPGVAVVEQGNGASGGYSIRGV
                     DKNRVAVSVDGVAQIQAFTVQGSLSGYGGRGGSGAINEIEYENISTVEIDKGAGSSDH
                     GSGALGGAVAFRTKEAADLISDGKSWGIQAKTAYGSKNRQFMKSLGAGFSKDGWEGLL
                     IRTERQGRETRPHGDIADGVEYGIDRLDAFRQTYDIQNPNKKAEYFLAEGESEPKPVA
                     KLAGNGNYLKNQLNRWVEERKKNNQPLSAEEEAMVREAQARHENLSAQAYTGGGRILP
                     DPMDYRSGSWLAKLGYRFGGRHYVGGVFEDTKQRYDIRDMTEKQYYGTDEAKKFSNKS
                     GVYDGNDFRDGLYFVPNIEEWKGDTNLVKGIGLKYSRTKFIDEHHRRRRMGLLYRYEN
                     EKYSDNWADKAVLSFDKQGVATDNNTLKLNCAVYPAVDKSCRASADKPYSYDSSDRFH
                     YREQHNVLNASFEKSLKNKWTKHHLTLGFGYDASKAISRPEQLSHNAARISEHTGEYT
                     DDGKDKYRLGKPEVVEGSVCGYIETLRSRKCVPRKINGSNIHISLNDRFSIGKYFDFS
                     LGGRYDRQNFTTSEELVRSGRYVDRSWNSGIVFKPNRHFSLSYRASSGFRTPSFQELF
                     GIDIYHDYPKGWQRPALKSEKAANREIGLQWKGDFGFLEISSFRNRYTDMIAVADHKT
                     KLPNQAGQLTEIDIRDYYNAQNMSLQGVNILGKIDWNGVYGKLPEGLYTTLAYNRIKP
                     KSVSNRPGLSLRSYALDAVQPSRYVLGFGYDQPEGKWGANIMLTYSKGKNPDELAYLA
                     GDQKRYSTKRASSSWSTADVSAYLNLKKRLTLRAAIYNIGNYRYVTWESLRQTAESTA
                     NRHGGDSNYGRYAAPGRNFSLALEMKF"
     gene            complement(2925..5159)
                     /locus_tag="WJJ54_001547"
     CDS             complement(2925..5159)
                     /locus_tag="WJJ54_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ7342394.1"
                     /translation="MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAYPVTFKSK
                     DVPTSPPAGPSVETTPVNRPAVGAAMRLPRRNTAFHREDGTVIPDSKQAEEQLSFKEE
                     DILFLYGSKEDQRQQLKDKIRQPNSTASIITSEKKNARYSYKFVDAGYVYVRGEDEIK
                     WTSDHKQFSNRLGYDGFVYYSGEHPSQSLPSAGKVKYFGNWQYMTDAKRHRAGKAVGI
                     DNLGYITFYGNDVGATSYAAKDVDEREEHPAEYTVDFDKKILKGELIKNQYVQKKNDP
                     TEPKKPLTIYNITADLNGNRFTGSAKVNTELKTRHADKEYLFFHTDADRRLEGGFFGD
                     KGEELAGRFISNDNSVFGVFAGKQKTDASGTNPAMPSEKHTKILDSLKISVDEASDKN
                     PREFAISTMPDFGHPDKLLVEGREISLVKDTQTIDLADGRKMTVSACCDFLTYVKLGR
                     IKTERPASKPKAEDKGEDEEGAGVDNGEEGEDEAVEDEGSEEDEVSEGDNGENEEEIA
                     EEETEEEVEEPEEEVEEPEEEVEEPEEELPAEEGNGGSGSILPAPEAPKGRDIDLFLK
                     GIRTAETNIPQTGKARYIGTWEARISKPIQWDNQADKAAKAEFTVDFGGKSISGTLTE
                     KNGVEAAFHIENGVIEGNGFHATARTRDNGINLSGTGSTNPKTFQANDLRVEGGFYGP
                     QAEELGGTIFNKDGKSLDITEDTENEAEAEAEADVGEQLKPEVKPQFGVVFGAKKDNK
                     EVEK"
BASE COUNT         1158 a         1501 c         1249 g         1567 t
ORIGIN      
        1 ggaaatcttg tttatatcga atcaaaaaaa cctgcacctt aatcagttgg cggtttagtc
       61 cgacttttgg ggtgcagatc aagctttcag acggtatttc ctttaaaact tcatttcgag
      121 cgcgaggctg aagttcctgc ccggtgcggc ataccttcca tagttgctgt cgccgccgtg
      181 ccggtttgcc gtgctttccg cggtctggcg caaggattcc caagtaacgt agcggtagtt
      241 gccgatattg tagatagccg ccctcaaggt cagccgtttt ttcagattca gataggcgga
      301 aacgtctgcc gtcgaccaag aagacgacgc tctttttgtc gaatatcgtt tttgatcgcc
      361 tgccagataa gcaagctcgt cagggttttt ccctttggaa taggtcagca taatgtttgc
      421 gccccatttc ccctctggct ggtcgtatcc gaaccccaaa acataacgcg acggctgtac
      481 cgcatccaaa gcatagctgc ggagggacag tcccggccgg ttggataccg atttcggttt
      541 gatgcggttg tacgccaaag tcgtgtacaa accttcgggc agtttgccat acacgccgtt
      601 ccagtcgatt tttcccaata tattaacgcc ttgaagcgac atattttggg cattgtaata
      661 atcgcgtata tcaatctctg tcaattgtcc tgcctgattc ggcaatttgg ttttgtgatc
      721 ggcaacggca atcatatcgg tataacggtt gcggaagctg ctgatttcca aaaagccgaa
      781 atcgcccttc cactgcaaac cgatttcgcg gttggctgcc ttttccgatt tcagggcggg
      841 acgctgccag cctttcggat aatcgtgata aatgtctatc ccgaaaagtt cttggaatga
      901 gggcgttctg aagccgctgg aggcgcggta agacaaagaa aaatgccggt tcggtttgaa
      961 cacgatgccg ctgttccacg aacggtcaac ataccgccca ctgcggacga gttcttccga
     1021 cgtggtgaag ttttgccggt cgtacctgcc gcccaagctg aaatcgaaat atttgccgat
     1081 tgaaaaacgg tcgttcaaag aaatgtggat attgctgccg ttgatttttc ttggcacgca
     1141 tttgcgggaa cgcagggttt cgatatagcc gcagaccgac ccttcgacga cttcgggctt
     1201 acccaaacgg tacttgtctt tgccgtcgtc ggtgtactcc cccgtgtgtt ccgaaatcct
     1261 tgccgcattg tgggaaagct gttctgggcg ggagatcgct ttggaagcat cgtaaccgaa
     1321 gcccaaagtc agatggtgtt tcgtccattt gtttttcagc gatttctcaa acgaggcatt
     1381 caaaacatta tgctgttcgc ggtagtggaa acggtcgctg ctgtcgtagg aatacggttt
     1441 gtccgccgac gcgcggcagg atttgtccac ggcaggatac acggcgcaat tcagcttcag
     1501 cgtgttgttg tcggttgcca cgccctgttt gtcaaacgac aacaccgcct tatccgccca
     1561 gttatccgag tatttctcat tttcataacg atacagcaaa cccatacggc ggcggcggtg
     1621 atgttcgtca ataaatttgg tgcgggaata tttcaaacct atgcccttga ccaaatttgt
     1681 atcgcccttc cactcttcta tattcggcac aaaatacaag ccgtcgcgga aatcgttgcc
     1741 gtcgtacacc ccgctcttgt tgctaaactt tttcgcctcg tccgtaccgt aatactgttt
     1801 ttccgtcata tcgcggatgt cgtaacgctg tttggtatcc tcaaacacgc cgccgacata
     1861 atgcctgccg ccgaagcggt agcccagctt ggcaagccac gaaccgctgc ggtaatccat
     1921 cggatcgggc aatatcctgc cgccgcccgt gtaagcttgg gcggacaggt tttcgtggcg
     1981 cgcctgcgcc tcccgcacca tcgcttcttc ttcagcactt aaaggctgat tgtttttctt
     2041 acgttcttcc acccaacggt tgagctggtt tttcaaatag tttccgttgc ccgccaattt
     2101 tgccacgggc ttgggttcac tctcgccctc cgccaggaaa tattccgcct ttttattcgg
     2161 attctgaata tcgtatgtct ggcggaacgc gtccaaacgg tctatgccgt attccacccc
     2221 gtccgcaata tcgccgtgcg ggcgcgtttc ccgcccttgg cgttcggtcc ggattagcag
     2281 cccttcccaa ccgtctttgc tgaaccccgc gccgagcgac ttcataaatt ggcggttttt
     2341 actgccgtag gcggtttttg cctgtatccc ccaacttttg ccgtctgaaa tcaggtctgc
     2401 cgcttctttg gtgcggaagg cgaccgcgcc gccgagtgcg ccgctgccgt gatcggacga
     2461 accggcacct ttgtcgattt ccaccgtgct gatgttttca tattcgattt cgttgattgc
     2521 accgctgccg ccgcgtccgc cgtatccgct caacgatccc tgcacggtaa acgcctgtat
     2581 ttgggcaacg ccgtcaaccg aaaccgccac acggttttta tccacgccgc gtatcgagta
     2641 gccgccgctc gcgccgttgc cctgttcgac aaccgccacg cccggatcgt agcgcgtcag
     2701 atcgcggata ccgagtacct gttctttgtt caacgtttcc gacgttttga cgattttgcc
     2761 caaaccggtc gcctctttcg atcgccgtcc cactttggcg gcacggacgg taacctcttt
     2821 caaggattgg gtctgcgccg ccgtttcgga gtttgccgca tatgacggga aggcggttgc
     2881 aatggccaag gcagtcaaag tcagcggaaa actgtgtttc ttattcattt ttccacctct
     2941 ttattatctt tcttcgcacc gaataccacg ccgaattggg gtttaacttc aggttttaac
     3001 tgttcgccaa catcagcttc agcttcagct tcagcttcat tttcagtatc ttcagttata
     3061 tcaagagatt tcccatcctt attgaaaata gtaccgccta attcctccgc ctgcgggccg
     3121 taaaatcctc cttctacacg aagatcatta gcttggaagg ttttggggtt ggtcgaacca
     3181 gttcccgaaa gattgatgcc gttatcccga gtgcgcgctg tcgcgtggaa accgttgccc
     3241 tcaatcacgc cgttttcaat atggaaagca gcttctacac cgtttttctc cgtcagcgtt
     3301 ccggaaatcg atttcccgcc gaaatcaacg gtaaattctg cttttgccgc tttatccgcc
     3361 tgattgtccc attgaatggg tttgctgata cgcgcttccc aagtgccgat atagcgtgct
     3421 tttccagttt gcggaatatt cgtttctgcc gtgcggatac ctttcaggaa aaggtcgatg
     3481 tccctgcctt taggggcttc cggagcgggc aggatgctgc ctgaaccgcc gttgccttct
     3541 tctgccggca attcttcttc gggttcttca acttcttctt cgggttcttc aacttcttct
     3601 tcgggttctt caacttcttc ttcggtttct tcttcggcga tttcttcttc gttttcaccg
     3661 ttatcacctt cggaaacttc gtcttcttcg ctgccttcgt cttctacggc ttcgtcttcg
     3721 ccttcttcgc cgttatcaac gcctgcaccc tcttcatcct cccctttatc ttccgccttt
     3781 ggtttacttg ccgggcgttc ggtttttatc cgtccgagtt tcacataggt caaaaagtcg
     3841 caacaagcac tgacggtcat tttcctgccg tcggcaagat caatggtttg agtatctttg
     3901 accaaggaga tttcacgccc ttcgacaaga agcttgtcgg gatgaccaaa atcgggcata
     3961 gtggaaatgg caaactcacg gggattttta tcacttgcct cgtcaacgga aatttttaga
     4021 gaatccaaga ttttggtgtg tttttcagac ggcatagcag gatttgtgcc tgatgcgtct
     4081 gttttttgtt tgcctgcgaa tacgccgaat acgctgttgt cgttactgat aaaccgtccg
     4141 gcaagctctt cccccttatc gccgaaaaaa ccgccctcaa gccgccgatc ggcatcggta
     4201 tggaaaaaca aatattcttt atcagcgtgg cgcgtcttca actcggtgtt aactttggca
     4261 ctgccggtaa agcggttgcc gtttaaatcg gcagtaatgt tgtaaatggt cagcggtttt
     4321 ttaggttccg ttggatcatt tttcttttgc acatactgat ttttaatcag ctcgcccttt
     4381 aggatttttt tgtcgaaatc aaccgtatat tcggcgggat gctcttccct ttcgtcgaca
     4441 tccttagccg cataagaagt tgcaccaaca tcgttaccat aaaatgtgat ataacccaaa
     4501 ttgtcaatgc caaccgcctt acctgctcga tgacgtttgg catcagtcat atattgccag
     4561 ttgccgaaat attttacctt tcccgcgctc ggtaaagatt gggaaggatg ttctccagaa
     4621 taatatacaa aaccatcata acctaagcgg ttggaaaact gcttgtgatc tgaagtccac
     4681 ttaatttcat cttcccccct tacatataca taacctgcat ctacaaattt ataactatat
     4741 cttgcatttt tcttttccga tgtgataatg cttgccgtag aatttggttg acgaatttta
     4801 tctttaagct gctgacgttg atcttctttg gaaccgtata aaaacaggat atcttcctct
     4861 ttaaacgaca gctgttcttc tgcttgtttg ctatcgggaa ttaccgtgcc atcttcacga
     4921 tgaaaagcag tattccgcct tggcagccgc attgccgcac cgacggcggg ccggttgacc
     4981 ggcgtggttt ctaccgaagg cccggcaggg ggcgaagtgg gaacgtcctt agacttgaaa
     5041 gtgacggggt acgcggtcgg cgttgattcg acaacaggct gcacgccgaa attgccgccg
     5101 atgcaagatg ccaaaagtaa gggcaacaag acaatgccgc cataattcgg tttacacatc
     5161 cctacttttc ctcctatttg attaataata attatcatta tattaatatg tacagataat
     5221 atcaacccgt ttttatagtg aattaacaaa aatccggaca aggcgacgag ccgcagacag
     5281 tacagataca tcccgtcatt cccacgaacc tacattccgt cattcccacg aacctacatc
     5341 ccgtcattcc cacgcacctg catcccgtca ttcccacgaa cctacattcc gtcattccca
     5401 cgaacctgca ccacgtcatt cccacgaacc tgcatcccgt cattcccacg aacctgcatc
     5461 ccgtcattcc cacga
//
LOCUS       DAWKJW010000130         5457 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.130, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000130 DAWKJW010000000
VERSION     DAWKJW010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5457)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5457)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5457
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.130"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            295..1728
                     /locus_tag="WJJ54_001548"
     CDS             295..1728
                     /locus_tag="WJJ54_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEZ7342395.1"
                     /translation="MNEYYQLIKHPDISLSPISDGIGVGNPATGEILAYVRNTGSDKL
                     KNLIQKAAAAQKLWAAKTALERADILWRWYFLVKENKEALARLMTMEQGKGLTEARGE
                     IDYAASFVRWFAEEARRIDGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIARK
                     AAPALAVGCAMIVKPASLTPLSAYALAVLAYEAGVPQDLLPVVSGRASEISREFATNP
                     IIRKISFTGSTEVGAKIFADSAADIKKLSLELGGNAPFIVFDDADLDKAVEGALASKF
                     RNSGQTCVCTNRVYAQSGIYDEFCRKLSEKAAALKLGNGLEDGVNQGPLIEEKAVEKV
                     EQHIADALAKGAVCLTGGKRSALGGTFFEPTVLSGVTAQMAVAREETFGPLCPVFRFE
                     TEAEVIAAANDTEYGLAAYLFTSDTARQWRVGEALEYGMVGINTGLISNEVAPFGGVK
                     RSGLGREGSKYGADEYLELKYLCIDVG"
     gene            1973..2761
                     /locus_tag="WJJ54_001549"
     CDS             1973..2761
                     /locus_tag="WJJ54_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimb protein"
                     /protein_id="HEZ7342396.1"
                     /translation="MMENGKTASRWRFALKSAGWHLLISLSVAGLAALLVFKVWYPYP
                     YAELTGGLSLYQLVVAVDIVCGPLLTLILASPKKKTKARMVDFSMVGIIQLAALVYGL
                     HSVSLARPVVEAFEKDRINVVTAAEVAVEDLHKAPEGLQSLSWFGIRRIALKEPEDAD
                     EKNKTLDLSLKGIEPSMRPDRWLPYSDKEAEEIRKHLKPLKVLADARKTTVADILKQA
                     GLAEGEELYYLPFTSSRQKEWIVITDKEGNTKGYAPIDGFIITP"
     gene            3129..4685
                     /locus_tag="WJJ54_001550"
     CDS             3129..4685
                     /locus_tag="WJJ54_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEZ7342397.1"
                     /translation="MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVQPAR
                     RDRARIIGLGLAVVIRIIMLAFMAHIITLTEPLFQIGGLAVSGKDMIMLAGGIFLLYK
                     ATTELHERLEGHNRFTVADSQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVV
                     AMGAVVVAMAVMISASKLLTEFVDRHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYL
                     YAAIGFSILIELFNQISQRNSRKNDYIGSSWRKRTAENVLGMMGIRESVLADAGGESG
                     DDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQCAQLQNTPYSRL
                     LVVGKAGVDEPLGYINKKDLLSQLLETGGLDIQTALRQPLVLPDSTTALGAIELFRQS
                     SADYALVVDEFGAVLGMVTMKDLLETIAGEFPEEFEREEEPAVQGNPDESLTVEGALE
                     YVELASQLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE
                     RVKITKLPEE"
     gene            4702..5448
                     /gene="surE"
                     /locus_tag="WJJ54_001551"
     CDS             4702..5448
                     /gene="surE"
                     /locus_tag="WJJ54_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEZ7342398.1"
                     /translation="MNVLISNDDGYLSEGIAVLARVTAEFANVRVVAPERDRSGVSNS
                     LTLERPLQLKQAQNGFYYVNGTPTDCIHIGQSVFSDFQADFVFSGINRGANMGDDTLY
                     SGTVAAATEAYLMGIPAVAFSLNDASGRYWATAEKALWTLLAHFFKTPPQSPILWNIN
                     IPAVEPEDVRGIKIARLGRRHHGQNVIPARNPRGEQIYWIGPVGRVSDKEEGTDFGEC
                     GAGFITVTPLQIDLTAYPDMAETAAFWHAD"
BASE COUNT         1283 a         1365 c         1534 g         1275 t
ORIGIN      
        1 gtttggattt ttgccatact ctaccacacg ttgcaactgc aatctttgtt ccttatatat
       61 tattaaaggg ctgcattact tttctttcta aattaccatt gtataaaaag tatttttctt
      121 aaacgacagg gattgcgccc gcgccatatt cagacaccgc ccggatgttg cgctgcccga
      181 tcggatgctt cagacggcat cggaagggtt tgcagttttg gaatatgaag atgataatgt
      241 ccgcgagatt gacggcattt gaaagcggtt attccgcata ccggaggaca cgaaatgaac
      301 gaatattacc aattaatcaa gcatcccgat atttcccttt ccccgatttc agacggcatc
      361 ggggtcggca atccggcgac gggcgaaatt ttggcgtatg tccgcaatac gggttcggac
      421 aaactgaaaa acctgattca aaaggcggcg gcagcgcaaa aattatgggc ggcgaaaact
      481 gctttggaac gcgccgacat attgtggcgt tggtattttt tagttaaaga aaacaaagaa
      541 gcactggcgc gtctcatgac gatggagcag ggcaaaggcc tgaccgaggc gcgcggcgaa
      601 atcgattatg cggcttcgtt tgtgcgctgg tttgccgaag aggcgcggcg gattgacggc
      661 gatgtgctga cgagtgtgaa agcatcgcaa aaactggtcg tgttgaaaca gcctgtcggc
      721 gttactgccg caattacgcc gtggaacttc ccgtctgcga tgattgcgcg caaggccgcg
      781 cctgctttgg cggttggctg cgcgatgatt gtcaaacctg catcgctcac gcctttgagt
      841 gcgtatgcgt tggccgtgct ggcttatgaa gctggcgtgc cgcaggattt gcttcccgtc
      901 gttagtggcc gcgcttcgga aatcagccgt gaatttgcca cgaatccgat tatccgcaaa
      961 atcagcttca ccggctcgac cgaagtcggt gcaaaaattt ttgccgatag cgcggcggac
     1021 attaaaaaac tcagtttgga actgggaggc aacgcgccgt ttatcgtgtt tgacgatgcc
     1081 gatttggaca aagccgtcga aggcgcgctc gccagcaagt tccgcaacag cggtcagacc
     1141 tgtgtctgca ccaaccgcgt ttacgcccaa tcgggcattt acgacgaatt ttgccgcaaa
     1201 ttaagtgaaa aagcagccgc gctcaaattg ggcaacggct tggaagatgg cgtaaaccaa
     1261 gggccgctga ttgaggaaaa agcggtggaa aaagtcgagc agcacattgc tgacgcgctc
     1321 gctaaaggcg cggtctgtct gaccggcggc aaacgcagcg cgttgggcgg aacgtttttt
     1381 gagccgactg tcttaagcgg cgtaacagca caaatggcgg tggcgcgcga ggaaaccttc
     1441 gggccgttgt gtccagtgtt ccgttttgaa accgaagccg aagtcatcgc ggccgccaac
     1501 gatacggaat acggtttggc agcttacctt ttcacctccg ataccgcccg ccaatggcgc
     1561 gtcggcgaag cattggaata cggtatggtc ggcatcaata cgggcttaat cagtaatgaa
     1621 gtggcaccgt tcggcggcgt gaaacgcagc ggtttgggac gtgaaggcag caaatatggt
     1681 gcggacgaat atctagaatt gaaatatttg tgtattgatg tcgggtagag tatatatttg
     1741 atttatatgc aaaaagtttt tgggtatgta aatctgatag attcacatac cccaacttat
     1801 accccaattt atttgaagtt ggtttgaagc cagtttgcta cggcttcttc gttccaccgg
     1861 ctgctcctgc cgtctgaaca gcaggttttc agacggtgcc gcattttaag cagcctttat
     1921 ctgttgtaca atgcgccctg tttttacggt tatttttgat ttgaattaag atatgatgga
     1981 aaacggaaaa acagcctcga gatggcgttt tgccttgaaa agtgcgggct ggcacctctt
     2041 aatcagccta tcggttgcag gactggcggc attgctggtt tttaaggttt ggtatcctta
     2101 tccttatgcc gagctgacgg gagggctgtc gctttatcag ctggtggtgg ctgttgatat
     2161 cgtatgcggc ccgctgctga ctttaatttt ggcaagcccg aagaaaaaga caaaggcacg
     2221 catggtcgat ttttccatgg tcggcatcat ccagctggcg gctttggtgt acggtctgca
     2281 cagcgtttct ttggcgcgtc ccgtggtgga ggcgtttgaa aaagacagga ttaatgttgt
     2341 gaccgccgcc gaagtggcgg ttgaagacct gcacaaagcg ccggaagggc tgcaaagcct
     2401 gtcgtggttc ggcatccgcc gcattgcatt gaaagaacct gaggatgcgg atgagaagaa
     2461 caagacgctg gatttgtccc tgaaaggtat cgagccgagt atgcgtcccg accggtggct
     2521 gccgtattcc gacaaggaag cagaagaaat ccgcaaacat ctgaaaccgc tgaaagtctt
     2581 ggcggatgcg agaaaaacga cggttgcgga cattctgaaa caggcaggtc tcgccgaagg
     2641 ggaggagctg tattacctgc cgtttaccag cagcaggcag aaagagtgga tagtcattac
     2701 cgataaagag ggcaacacca aaggctacgc gccgatagac ggcttcatca tcacccctta
     2761 agcgttggga ctccgtccgc actcgaacat ccgttcttcg cggcggtaga atcagactgt
     2821 atttgagagg ggcgcaaccc ctcaatcagg gcaacacata ggggaaggct ttatgtgccg
     2881 tccgtgtgtt gaaacatttc aaaataagct catgccgtcc gaacatcctt tcagacggta
     2941 tggcattttg ccattgcccc gataagctgt taaactattt aaattatttc gaccgaaggt
     3001 acacgcacat gaaagacccc gagcagagca gcaagcccgc ccgccgtttt ttgtgcgtac
     3061 cgtctgttca ggcagcttga gcgcttcagg ctgccttttc gcgtttgaac ttgaggaata
     3121 cgaaaatcat ggatttcagt tggttggcag aaccgcatac ctggataggt tttgccacgc
     3181 ttttggtgtt ggaagtcgta ttggggatag acaaccttgt ctttgtggcg attttggcaa
     3241 acaaggtcca gcccgcacgg cgcgaccgcg cacggattat cgggctgggg ctggcagtcg
     3301 tcatccgcat cattatgctt gcttttatgg cgcacatcat cacgctgacc gagccgctgt
     3361 tccaaatcgg cggcctcgcc gtttccggca aggacatgat tatgctcgcg ggcggtattt
     3421 tcctgcttta caaagccacc accgaactgc atgaacgcct cgaagggcac aaccgtttta
     3481 ccgttgccga cagccaaaaa aaacacgcgc cgttttgggg cgtggtcgcg caaatcctga
     3541 tactggatgc cgtgttttcc atcgattcgg tcattactgc ggtggcgatg gtcgatcata
     3601 tcgtcgtggc gatgggtgcg gtcgtcgtcg caatggctgt aatgatttct gccagcaaac
     3661 tcttgaccga atttgtcgac agacacccta ccgtcgtgat gctctgcctt ggttttttgt
     3721 tgatgatcgg tttcagcctg attgccgaag ccttccattt ccacattccc aaaggctacc
     3781 tctacgccgc catcggcttc tcgattttaa tcgaactgtt taaccagatt tcccagcgca
     3841 acagccgcaa aaacgactac atcggcagct cgtggcgcaa acggactgct gaaaacgttt
     3901 tgggtatgat gggcatacgc gaaagcgtgc ttgccgacgc gggcggcgaa tccggggacg
     3961 acgcgcattt tgaagaaaac gaaaaatcga tgatacgcag cgtgctgacg cttgccgaac
     4021 gcccgattat gggggtgatg atcccacgcc gcgacatcga acggctggac atttcccaaa
     4081 gccgcgaaga acagtgtgcc caactgcaaa acacgcctta cagccgcctg ctcgttgtcg
     4141 gtaaggcggg cgtggacgaa cctttgggct acatcaacaa aaaagacctg ctgtcccaac
     4201 tgctggaaac aggcggtctc gacattcaga cggcattgcg ccagccgctc gttttgcccg
     4261 acagcaccac cgcgctgggc gcaatcgaac tcttccgcca aagcagcgcg gattatgctt
     4321 tggtggtgga cgagttcggc gcggtattgg gcatggtaac catgaaagac ctgctcgaaa
     4381 ccatcgcagg cgagttcccc gaagaatttg agcgcgaaga agaaccagcc gttcagggga
     4441 atcccgatga aagcctgacg gtggaaggcg cgttggaata tgtggagctg gcatcccaac
     4501 tcaatctgcc gcagcaggag gaagatgccg atttccatac ggttgccggg ctgattatgg
     4561 aagaattgca aaccatcccc gatgtcggcg attttgccga tttccacggt tggcggtttg
     4621 aagtggtcga aaaagaaggg cagcgcatcg agcgggtcaa aatcaccaaa ttgcccgaag
     4681 aataagcatt caggatagaa aatgaacgtt ttgatttcca acgacgacgg ctacctctcc
     4741 gaaggcatcg ccgttttggc gcgcgttacg gcggaatttg ccaacgtcag ggtggtcgcg
     4801 cccgaacgcg acaggagcgg ggtcagcaat tcgctgacac tggaacgccc tttgcagttg
     4861 aaacaggcgc aaaacggctt ttactatgtc aacggcacgc cgaccgactg catccacatc
     4921 gggcagtctg tattttcgga ttttcaggcc gattttgtct tttcgggcat caaccggggc
     4981 gcgaatatgg gggacgacac gctttattcg gggacggttg cggcggcaac cgaagcctac
     5041 cttatgggca tacccgctgt ggcgttttcc ttaaacgacg cttccggacg ctattgggca
     5101 accgcagaaa aggcactgtg gacattgttg gcgcattttt tcaaaacccc cccgcagtcc
     5161 cctattttgt ggaacatcaa tatccccgcc gtcgagccgg aagatgtgcg gggcattaaa
     5221 atcgcccgtt tgggcaggag gcatcacggt cagaacgtca tccccgcgcg caatccgcgc
     5281 ggcgaacaga tttattggat aggcccggta ggcagggttt ccgacaaaga agagggaacg
     5341 gatttcggtg aatgcggcgc aggtttcatt accgtaacgc cgctgcaaat cgacctgacc
     5401 gcctatccgg acatggcgga aacagcggcg ttctggcatg cggactgacc gtttcat
//
LOCUS       DAWKJW010000131         5436 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.131, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000131 DAWKJW010000000
VERSION     DAWKJW010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5436
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.131"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(77..277)
                     /locus_tag="WJJ54_001552"
     CDS             complement(77..277)
                     /locus_tag="WJJ54_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342399.1"
                     /translation="MIGRLFRIFFFFALAALIINRLFSRRQKRALREVAEISAWVLLG
                     AAAAMLFWYLFMLYFKHIPDSY"
     gene            427..1566
                     /locus_tag="WJJ54_001553"
     CDS             427..1566
                     /locus_tag="WJJ54_001553"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEZ7342400.1"
                     /translation="MSQNASVGIVMPQKIPFEMPLVLENGKTLPRFDLMIETYGELNA
                     EKNNAVLICHALSGNHHVAGRHSAEDKYTGWWDNMVGPGKPIDTERFFVVGLNNLGGC
                     DGSSGPLSINPETGREYGADFPVVTVKDWVKSQAALADYLGIEQWAAIVGGSLGGMQA
                     LQWTISYPERVRHALVIASAPKLSTQNIAFNDVARQAILTDPDFNEGHYRSHNTVPAR
                     GLRIARMMGHITYLAEDGLGKKFGRDLRSNGYQYGFGVEFEVESYLRYQGDKFVGRFD
                     ANTYLLMTKALDYFDPAADFGDSLTRALQNVKAKFFVASFSTDWRFAPERSHELVKAL
                     IAAQKSVQYIEVKSAHGHDAFLMEDEAYMRAVAAYMNNVYKECQQ"
     gene            1563..2144
                     /gene="metW"
                     /locus_tag="WJJ54_001554"
     CDS             1563..2144
                     /gene="metW"
                     /locus_tag="WJJ54_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HEZ7342401.1"
                     /translation="MNLRDDLQLIYDRIPEGSRVLDLGCGDGELLAALVEHKKCSGYG
                     IEIDTNSVIAAMSRGVNVIQADLEEGLTAFNDQSFDVIVLSQTIQAMQNTEKILRCLM
                     RVAKQAIVSFPNFGYWRNRVQIALGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAK
                     NNIRVLERAVMTGNRQVKHFPNLLGSLAFYRVG"
     gene            2261..3106
                     /locus_tag="WJJ54_001555"
     CDS             2261..3106
                     /locus_tag="WJJ54_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="d-alanine-poly(phosphoribitol) ligase"
                     /protein_id="HEZ7342402.1"
                     /translation="MKNKTSSLLLWLAAMMLTACSPSKEDKTKENGASAASSTASAAS
                     SSAPQTDLQPAASAPDNVKQAESVPPSNCTDLHPATGIDDLMQQIAEHIDSDCLFALS
                     HHELETRFGLPGGGYDNIQRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDA
                     LMEQERRLREATLLLIQGSQETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYI
                     GQLPGYLKIHGEMLENQSLFRLSNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNP
                     NLGRR"
     gene            complement(3156..3716)
                     /gene="efp"
                     /locus_tag="WJJ54_001556"
     CDS             complement(3156..3716)
                     /gene="efp"
                     /locus_tag="WJJ54_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEZ7342403.1"
                     /translation="MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNL
                     LTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALK
                     FIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTE
                     IQVMSYIENGDKVEIDTRTGEFRKRA"
     gene            complement(3759..4907)
                     /gene="earP"
                     /locus_tag="WJJ54_001557"
     CDS             complement(3759..4907)
                     /gene="earP"
                     /locus_tag="WJJ54_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HEZ7342404.1"
                     /translation="MNTPPFVCWIFCKVIDNFGDIGVSWRLARVLHRELGWQVHLWTD
                     DVSALRALCPDLPDVPCVHQDIHVRTWHSDAADIDTALVPDIVIETFACDLPENVLHI
                     IRRHKPLWLNWEYLSAEESNERLHLMPSPQEGVQKYFWFMGFSEKSGGLIRERDYRDA
                     VRFDTEALRERLMLPEKNASEWLLFGYRSDVWAKWLEMWQQAGSPLTLLLAGAQIIDS
                     LKQSGIIPQNALQNDGDVFQTASVCLVKIPFVPQQDFDKLLHLADCAVIRGEDSFVRA
                     QLAGKPFFWHIYPQDENVHLDKLHAFWDKAHGFYTPETASAHRRLSDDLNGGGALSAT
                     QRLECWQTLQQHQNGWRQGAEDWSRYLFGQPSASEKLAAFVSKHQKIR"
     gene            complement(4926..5204)
                     /locus_tag="WJJ54_001558"
     CDS             complement(4926..5204)
                     /locus_tag="WJJ54_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342405.1"
                     /translation="MSRNLLVRWLAVCLIPLATLAVFAANPPEDKLQHLINGIILACE
                     ATFLFKFVLFDTIKHHLKQEFDLKRQTMLLFIPIILLIVYLFHYFGAF"
BASE COUNT         1381 a         1398 c         1426 g         1231 t
ORIGIN      
        1 acctcctacc gcaagccctt ttcatcaaat atgccgtctg aaacagaaaa atgcgtttca
       61 gacggcattt tttccgtcaa tacgaatccg gaatgtgttt gaaatacagc ataaacagat
      121 accaaaacag catcgcggcg gctgcaccga gcagtaccca tgcgctgatt tcggcgactt
      181 cgcgcagggc gcgtttttgc ctgcggctga aaaggcggtt gataatcaac gcggcaagtg
      241 cgaaaaagaa aaaaatacgg aaaagtctgc ctatcatgtc gggaagcggt ggaggtcgtc
      301 tgaaaaagta tgattcgtgt gcggcggatg agggtcaaac gcgtccggct gcttgtccga
      361 ccgtgtcaaa aagtcatgcc gtttgcgata taataacgct tttcgccgca tttgttggaa
      421 caggatatga gtcaaaatgc ctcggtgggc attgtaatgc cccaaaaaat tccgtttgag
      481 atgccgctgg ttttggaaaa cggtaaaact ttgccgcgtt tcgatctgat gattgaaacc
      541 tacggcgagc tgaatgctga aaaaaacaat gcggttttaa tctgccacgc gctgtcgggc
      601 aaccatcatg ttgcgggcag gcattcggcg gaagataaat atacgggctg gtgggacaat
      661 atggtcggac ctggcaaacc gattgatacg gaacgttttt tcgtggtcgg tttgaataat
      721 ctgggcggct gcgacggcag cagcgggcct ttgtcgatta atcctgaaac gggcagggaa
      781 tacggcgcgg attttccggt ggttacggtg aaggactggg taaaatccca agccgcgctt
      841 gccgactatc tcggtatcga acaatgggcg gcgattgtcg gtggcagctt gggcggcatg
      901 caggctttgc agtggacgat ttcctacccc gagcgtgtgc gccatgcttt ggtgattgcg
      961 tctgcgccga aactgtccac gcaaaatatc gcgtttaacg atgtggcgcg tcaggcaatt
     1021 ttgaccgacc ctgatttcaa tgaaggacat taccgcagcc acaataccgt tcctgcacgg
     1081 ggcttgcgga ttgcccgcat gatgggacac atcacttatc ttgccgaaga cggtttaggc
     1141 aaaaaattcg gacgcgattt gcgttccaac ggttatcaat acggctttgg tgttgaattt
     1201 gaagtggaat cctatcttcg ctatcagggc gacaaattcg tcggacggtt cgacgccaac
     1261 acttacctgc tcatgaccaa ggctttggac tatttcgatc cggcggcaga tttcggcgac
     1321 agcctgaccc gcgccctgca aaatgtgaaa gcgaaattct ttgtcgccag cttcagcacc
     1381 gactggcgtt tcgcacccga acgttcgcac gaactggtca aggcactgat tgccgcccaa
     1441 aaatccgtgc agtatatcga agtcaaatcc gcacacgggc acgatgcctt tttaatggaa
     1501 gacgaagcct atatgcgtgc ggtcgccgcc tatatgaaca acgtttataa ggaatgtcag
     1561 caatgaacct gcgcgatgat ttgcaactga tttacgaccg gatacccgaa ggcagccgcg
     1621 tcttggactt gggctgcggc gacggcgaac tgcttgccgc attggtcgaa cacaaaaaat
     1681 gcagcggcta cggcatcgaa atcgacacaa atagcgtcat cgccgcgatg tcgcgcggcg
     1741 taaatgttat ccaagccgat ttggaagaag gtttaaccgc attcaacgat caaagttttg
     1801 atgtgattgt gttgagccaa accatccaag cgatgcagaa taccgaaaaa atcctgcgct
     1861 gcctgatgcg cgttgccaaa caggcgattg tcagcttccc gaatttcggc tactggcgca
     1921 accgcgtcca aatcgcactc ggcggacata tgccggtttc cgaacgtatg ccctaccatt
     1981 ggtacgacac gcccaatatc cattggtgca cgctcaaaga ctttgatttg ttgtgcgcca
     2041 aaaacaacat ccgcgtgctt gagcgcgccg tgatgacggg caacagacag gtcaaacatt
     2101 tccccaacct tttgggcagc cttgcatttt accgcgtcgg gtaagacaga ttgagaacct
     2161 tgtcggcatt aacaggttct tcggttctat taacaacagg ccgtctgaaa aatgaaacgg
     2221 taggttttca gacggcctct ttaatactgg aaacaataga atgaaaaaca aaacctcatc
     2281 acttctctta tggcttgccg caatgatgct gaccgcgtgt tccccgagca aagaagataa
     2341 aacgaaagaa aacggcgcat ccgccgcctc gtccacggca tccgccgctt cgtcttccgc
     2401 accccaaacc gatttgcaac cggccgcatc cgcccctgat aacgtcaagc aggcagaaag
     2461 cgtgccgccg tcaaattgca ccgacctgca ccccgccacc ggcattgacg atctcatgca
     2521 gcaaatcgcc gaacacattg actcggactg tctgtttgcc ctttcccatc acgaactgga
     2581 aacccgtttc ggcttacccg gcggcggcta tgacaacata cagcggctgc tgtttcccga
     2641 catccgccct gaagatcccg actaccatca gaaaatcata ctggcaattg aagacttgcg
     2701 ttacggaaag cgcacgatca gccggcaggc acaagatgcc ttgatggaac aggaacgccg
     2761 cctccgagaa gcgacgctgt tgctgataca gggcagtcaa gaaacccgcg gacaaggcga
     2821 ggagccgaaa cgcacgcgtt attttgaagt ttcggcaacc cctgcctatt cgagccggca
     2881 caacaacgga cttggcggca atttccaata catcggccaa ttgcccggct atctgaaaat
     2941 acacggagaa atgcttgaaa accaatcact cttccggctg tccaaccgtg aacgcaatcc
     3001 cgacaaaccg tttttagaca tccattttga cgaaaatggc aaaatcacgc gtattgtcgt
     3061 ttacgaaaaa aacatctact tcaatccaaa cttggggcga agataaaaaa atgccgtctg
     3121 aaacgttttc agacggcatt tttcaatgca acaaatcaag cgcgtttgcg gaattcgccg
     3181 gtgcgggtat cgatttcgac tttgtcgccg ttttcgatgt aagacatcac ttggatttcg
     3241 gtgccgccga ccaggcgcgc ggttttcatc actttgccgg aagtgtcgcc tttgacggca
     3301 ggctcggtgt actcgacttc gcgcacgatg atggtgggca gttcgacaga aatggggttg
     3361 ccttcgtaga aggtaacttc gcattggtct tccataccgt caacgatgaa tttcaacgcg
     3421 tcgccgatgt tgtcggcttc gatttcgtat tggttgaatt cttcatccat aaagacgtac
     3481 atcgggtcgg caaagtagct gtacgtacag tttttgcggg acaggatgac cacgtcgaat
     3541 ttgtcgtcgg ctttgtaaat ggtttcggaa gccgcgccgg tcagcaggtt tttcagtttc
     3601 atgctgactt tggcggaaga gcggccgcct ttgatgtatt cggttttttg aacgaccata
     3661 ggatcgttgc cgaccataaa tacattgccg gcgcgcagtt cttgtgctgt tttcattgtg
     3721 attttccaat caaatcggtt gtcgtaaaac gcgctattct agcgtatttt ttgatgcttt
     3781 gaaacaaagg cggcgagttt ttcggatgcg gaaggctgcc cgaaaagata acggctccaa
     3841 tcttccgcgc cttgccgcca gccgttttga tgttgttgca gggtttgcca acattcgagg
     3901 cgttgcgtgg cggataaagc ccctccgccg ttgaggtcgt ctgaaaggcg gcggtgtgcc
     3961 gatgcggttt cgggcgtgta gaaaccgtgt gccttatccc aaaaggcgtg gagtttgtcg
     4021 agatggacat tctcatcttg cgggtagatg tgccaaaaga agggtttgcc cgcaagctgg
     4081 gcgcgcacga aactgtcttc gccgcggatg acggcgcaat cggcgaggtg cagcagtttg
     4141 tcgaagtcct gttgcggcac gaaagggatt ttgacaaggc agacggatgc cgtctgaaaa
     4201 acatcgccgt cgttttgcag ggcgttttgc ggaatgatgc cgctttgttt gaggctgtcg
     4261 ataatttgcg cccccgccag caacagtgtc aacggactgc ctgcctgttg ccacatttcc
     4321 agccactttg cccaaacatc gctccgatag ccgaaaagca gccattcgga ggcgtttttt
     4381 tcgggcagca tcagccgctc tcgcagggct tcagtatcga aacggacggc atctcggtaa
     4441 tcacgttcgc gtatcaaccc gccgcttttt tcgctgaaac ccataaacca aaaatatttt
     4501 tgaacaccct cctgcggcga aggcatcaga tgcagccttt cattgctttc ttccgcgctc
     4561 aaatattccc aattcagcca aagcggcttg tgtcggcgga tgatgtgcag cacattttcg
     4621 ggcaggtcgc aggcaaaagt ttcgataacg atatcgggaa caagggcagt atcgatatcc
     4681 gccgcatcgg aatgccaagt gcggacatga atatcctgat gaacgcaggg aacatcgggc
     4741 aaatcagggc aaagcgcacg caaggcggac acatcgtccg tccacaaatg cacctgccaa
     4801 ccgagttcgc ggtgcaaaac acgggcgagc cgccacgaaa cgccgatgtc gccgaaattg
     4861 tcgatgacct tgcaaaaaat ccaacagaca aaaggaggag tattcataga aataacggaa
     4921 acaagctaaa acgcgccgaa atagtggaac aaatacacaa tcagcaaaat aatcggaata
     4981 aacagcaaca tagtttgacg tttcaaatca aactcttgtt tcaaatgatg cttgatggtg
     5041 tcgaaaagga cgaatttaaa caaaaacgtc gcttcgcagg caaggatgat gccgttgatc
     5101 agatgctgga gtttgtcttc gggcggattg gcggcgaaaa cggcaagcgt cgccaacggg
     5161 atgaggcaga cggcaagcca acggacaagc aggtttcgag acattgcaag gctttcaaaa
     5221 aaagcaaaac gccattatcg ccccaagcgc acgccttgtc taacggacgc accggagatg
     5281 ccgtctgaag ccttgccgca ggaaaacacc gcaccgccga acctttaaat acgcccgaga
     5341 cgggcgttcc ccgaaaaatc ggacgctgcc gccgatgcct gaggacaagg cggcagcagg
     5401 cacgggcata ttgaaaaccc ggcgcgtcgg tttgaa
//
LOCUS       DAWKJW010000132         5335 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.132, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000132 DAWKJW010000000
VERSION     DAWKJW010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5335
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.132"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            370..2409
                     /locus_tag="WJJ54_001559"
     CDS             370..2409
                     /locus_tag="WJJ54_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HEZ7342406.1"
                     /translation="MKSSIHTETVSSSKSTLWQKQAGRGSNIETLQLPSFTGPVAPVL
                     SAPGGYIVDIPKGNLKTQIETLTKQPEYAYLKQLQTAKNVDWKQVQLAYDKWDYKQEG
                     LTGAGAAIVVIIVTALTYGYGAAAAGSVTAAGSSTAAAATTTAAATTTVSTAAAMQTA
                     ALASLYSQAAVAIINNKGDVGKALKDLGTSDTVKQIVTSALTAGALNQMGADIAQLNS
                     KVRTELFSSTGNQTIANLGGRLATNLSNAGISAGINTAVNGGSLKDNLGNAALGALVN
                     SFQGEAASKIKTTFSDDYVAKQFAHALAGCVSGLVQGKCKDGAIGAAVGEIVAESILG
                     GRNPATLSDAEKHKVISYSKIIAGSVAALNGGDVNTAANAAEVAVVNNALNFDSTPTN
                     AKKHQPQKPDKTALEKIIQGIMPAHAAGAMTNPQDKDAAIWISNIRNGITGPIVITSY
                     GVYAAGWTAPLIGTAGKLAISTCMANPSGCTVMVTQAAEAGAGIATGAVTVGNAWEAP
                     VGALSKAKAAKQAAPKETINNLANLAKAEQQILFRIAQRDTQLDAWKTGFNNRVRKGA
                     GLLDASNIPITINGKTIKPVQAISLKGAPVYSGVSEQEIFALYRQMTGQNPNFRVLPD
                     GRLANGIISTGEWAGTKIALRNFSKTENSTQARWTLDLQNPPSFIKGTKLELKFQ"
     gene            2428..2802
                     /locus_tag="WJJ54_001560"
     CDS             2428..2802
                     /locus_tag="WJJ54_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF596 domain-containing protein"
                     /protein_id="HEZ7342407.1"
                     /translation="MDEKQKIKILDFQIDLSSIFNSYKNQMGINIQDKNLKNNFCSFM
                     EELLNDGSIRLHDYTDGIGIPLTGTSKEQVQKLKDIWPTLEDAQAIWPEDPWYYLEWL
                     WWDIACPIDLADLPNIDIYEQA"
     gene            3023..4017
                     /locus_tag="WJJ54_001561"
                     /pseudo
     CDS             3023..4017
                     /locus_tag="WJJ54_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575530.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
     gene            4165..4860
                     /locus_tag="WJJ54_001562"
     CDS             4165..4860
                     /locus_tag="WJJ54_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HEZ7342408.1"
                     /translation="MGDGCRNGINMSIKYIAMPAAWKYMPTDVSRVAKEVFGYLYNSQ
                     GASTRFDKYFNTIDNRADFFAASNLYEQNLGSKARWFGGADFVSRAAITGLGADGEAS
                     YITFAAGKVVGNPPIYEWRAASGNALIVNGFYNFRDLFNKKTNPREWDIQQLKSEQKL
                     LQPIHQKYLSNEKDYLSLIKGVTSNKIFSIIPNPLDERKKIEDGINMLDYKSRIKYGC
                     KLMGYSEKQGCKP"
     gene            4848..5291
                     /locus_tag="WJJ54_001563"
     CDS             4848..5291
                     /locus_tag="WJJ54_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342409.1"
                     /translation="MQAMNKNYLFYLIQNIKSIFLIGGVFFGLLIFSGLWGNDFKLSF
                     LGVIDFIFGMVGGGFIVMLWFLIPVILSTLFRWIFQNQLAVSVILTFIVFYTYGYFSL
                     FNSSERVGSFWYLVIPTIMFIGLSEWFIYKSSVHSLGENVTPRSN"
BASE COUNT         1616 a         1125 c         1292 g         1302 t
ORIGIN      
        1 atcgacatca aatctggtgg cagcatcgac gcctacgcca ccgcattcga tgcccccaaa
       61 ggcagcatta acatcgaagc cgggcggaaa ttgacactct atgccgtaga agagctcaac
      121 tacgacaaac tagacagcca aaaaaggcgc agatttctcg gcatcagcta cagcaaagca
      181 cacgacacca ccacccaagt catgaaaacc gcgctgccct caagggtagt tgcagaatca
      241 gccaacctcc aatcgggctg ggataccaaa ctgcaaggca cacagtttga aaccacactg
      301 ggtggcgcaa ccatacgcgc aggcgtaggt gagcaggcac gggcagatgc caagattatc
      361 ctcgaaggga tcaaaagcag catccacaca gaaaccgtga gcagcagcaa atctactcta
      421 tggcaaaaac aggcaggacg gggcagtaac atcgaaacct tgcaattgcc gagtttcacc
      481 ggtcccgttg cgcccgtact gtccgcaccc ggcggttaca ttgtcgatat tcccaaaggc
      541 aatctgaaaa cccaaatcga aaccctcacc aaacagcccg aatacgccta cctgaaacag
      601 cttcagacgg ccaagaacgt cgattggaaa caggtgcagc tggcctacga caaatgggac
      661 tataaacagg aaggcttgac cggagccggt gcagcgattg tggtgattat tgtaaccgct
      721 ctaacttatg gatacggagc ggctgcagcg ggtagcgtaa ctgccgcagg aagtagtaca
      781 gccgcagctg caacaacgac agcggcagca actaccactg tttctactgc agctgccatg
      841 caaaccgcag ctttagcctc cttgtatagc caagcagctg tagccatcat caataataaa
      901 ggcgatgtag gcaaagcatt aaaagatctc ggcaccagtg atacggtcaa gcagattgtt
      961 acttccgcac tgacggcggg tgcattaaac cagatgggag cagatattgc ccaattgaac
     1021 agcaaggtaa gaaccgaact gttcagcagt acgggcaatc aaaccattgc caaccttgga
     1081 ggcagattgg ccaccaacct cagcaatgca ggtatctcag ctggtatcaa taccgccgtt
     1141 aacggcggca gcttgaaaga caacttaggc aatgccgcat tgggagcatt ggttaatagc
     1201 ttccaagggg aagccgccag caaaatcaaa acaaccttca gcgacgatta tgttgccaaa
     1261 cagttcgccc acgctttggc gggttgtgtt agcggactgg tacagggaaa atgtaaagat
     1321 ggggcaattg gcgcagcagt tggggaaatc gtagctgaat ccatacttgg cggcagaaac
     1381 cctgctacac tcagcgatgc agaaaagcat aaagttatca gttactcgaa gattattgcg
     1441 ggcagcgtgg cggcactcaa cggcggcgat gtgaatactg cggcgaatgc ggctgaggta
     1501 gctgtggtga ataatgcttt gaattttgac agcaccccta ccaatgcgaa aaagcatcaa
     1561 ccgcagaagc ccgacaaaac cgcactggaa aaaattatcc aaggtattat gcctgcacat
     1621 gcagcaggtg cgatgactaa tccgcaggat aaggatgctg ccatttggat aagcaatatc
     1681 cgtaatggca tcacaggccc gattgtgatt accagctatg gggtttatgc agcaggttgg
     1741 acagctccgc tgatcggtac agcgggtaaa ttagctatca gcacctgcat ggctaatcct
     1801 tctggttgta ctgtcatggt cactcaggct gccgaagcgg gcgcgggaat cgccacgggt
     1861 gcggtaacgg taggcaacgc ttgggaagct ccagtaggag cgttgtcgaa agcgaaggcg
     1921 gctaagcaag ctgctcctaa agaaacaata aacaatttgg caaatttagc caaagcagaa
     1981 cagcagattt tattccgtat tgcccaacgc gatacgcaac tggatgcatg gaagacggga
     2041 tttaacaata gagtaaggaa aggagcaggc ttgcttgatg caagtaatat tccgataacc
     2101 attaacggaa aaaccatcaa acctgtacaa gccataagct taaagggagc acccgtttac
     2161 agcggcgtaa gcgaacagga gatttttgcg ctttatcggc agatgactgg ccagaatccg
     2221 aattttagag ttttgcctga cggaagatta gcaaatggca ttatcagtac tggagaatgg
     2281 gcaggaacaa aaattgcatt aagaaatttt tcaaaaacag agaattcaac tcaagcacga
     2341 tggacattag atttgcagaa tcctccatca tttattaaag gtactaaatt ggagcttaaa
     2401 ttccaataat ttacaaagga ttttaccgtg gatgagaaac aaaaaattaa gattcttgat
     2461 tttcaaatcg atttatcctc aatttttaac tcttataaaa atcaaatggg tattaatatt
     2521 caagataaaa acttaaaaaa caatttctgt tcttttatgg aagaactgtt aaatgacggt
     2581 tcaatccgtt tacatgatta taccgacggt atcggaattc ctctaactgg aacttcaaaa
     2641 gaacaagtgc agaaattgaa agacatatgg cctactttgg aagatgccca agcaatatgg
     2701 cctgaagacc cttggtatta cttagaatgg ctttggtggg atattgcgtg tccaatagat
     2761 ttggccgatt tgccgaatat tgatatttat gagcaagcgt aggtatggtt agccgccttt
     2821 agcggcgtaa ccgtacgcat atcagcaaac tttataaaat aacaaggccg tctgaaatct
     2881 gtttttcaac tttttcagac ggccttgcaa cttggcattt cattcgtacg gttacgccgc
     2941 taaaggcggc taaccgtacc tacgagctct gataaaaatg atttatggaa gcaagctgta
     3001 gcctgcatga aacctaaaat ccatgcgtaa ggtgtgtgct tcagcgcgca cgcgttccat
     3061 gatttacggc tcaatgccgt ctgaaaagct caattttttc agacggcatt tgttatgcaa
     3121 gtaaatattc agattcccta tatactgccc agacgcgtgc gtgctgaaga cacctcctac
     3181 gcttgctatt tgaaacagct ccaagtcacc aaagacgtca actggaacca ggtacaactg
     3241 gcgtacgaca aatgggacta taaacaggaa ggcttaaccg gagccggagc agcgattatt
     3301 gcgctggctg ttaccgtggt tactgcgggc gcgggagccg gagccgcact gggcttaaac
     3361 ggcgcggccg cagcggcaac cgatgccgca ttcgcctcgc tggccagcca agcttccgta
     3421 tcgctcatca acaataaagg cgatgtcggt aaaaccctga aggagctggg cagaagccgc
     3481 acagtgaaaa aactggttgt agcagcggcc atcgcaggcg tatccaacaa aatcggtgct
     3541 tcctcccttg ccacttggag cgaaacccct tgggtaaaca acctcaacgt caacctggcc
     3601 aatgcgggca gtgccgcact gattaatacc gctgtcaacg gcggcagcct gaaagacaat
     3661 ctggaagcga atatccttgc ggctttggtc aataccgcgc atggagaagc agccagtaaa
     3721 atcaaacagt tggatcagca ctacatagtc cacaagattg cccatgccat agcgggctgt
     3781 gcggcagcgg cggcgaataa gggcaagtgt caggatggcg cgataggagc ggcggtcggt
     3841 gaaatcctcg gcgaagccct gctggacggc agagacccgg gcagcctgaa tgtgaaagac
     3901 cgggcaaaaa tcattgctaa ggcgaagctg gcagcaggga cggttgcggc gttgagtaag
     3961 ggggatgtga atgctgcggc gaatgcggct gctgtggcgg tagagagtaa tgcgcttagc
     4021 aaggaaagaa tggataaatt gacaaaatgc ctttccggta aaacttgttc tactacgatg
     4081 gaaaaagtaa atgccatcaa aaaggatgaa caatttagca aagtaattga tacggaaatt
     4141 caaaaagtct gttctaggaa cccattgggc gatggttgca gaaacggcat taatatgtct
     4201 attaaatata ttgccatgcc tgctgcgtgg aagtatatgc ctacggatgt atcacgggtt
     4261 gccaaagaag tttttggcta tttatataac tcacaagggg catctacaag atttgacaag
     4321 tatttcaaca ccattgacaa tcgtgcagat ttctttgctg ccagcaatct ttatgagcaa
     4381 aatttgggtt caaaagcacg atggtttggt ggagctgatt ttgtatcgcg tgctgctata
     4441 actgggttag gggcagacgg agaagcttct tatataactt ttgcggcagg taaagttgtt
     4501 ggtaatcctc caatttatga atggagggct gcgtcaggca atgcactgat agtaaatgga
     4561 ttttataatt ttagagactt gttcaataaa aaaactaatc ctagggagtg ggatattcaa
     4621 cagttgaaaa gcgagcaaaa gttattacag cctattcacc aaaaatattt gagtaatgag
     4681 aaggattatt tgtcattgat taaaggggta acatcaaata agatattttc aataattcca
     4741 aatcctttag atgagaggaa aaaaatagag gatggaatta atatgttaga ttacaaatct
     4801 agaattaaat atggttgtaa gcttatggga tattctgaga aacagggatg caagccatga
     4861 ataaaaatta tttattttat cttattcaaa atattaaatc tattttctta ataggtggag
     4921 tattttttgg ccttttaatt ttttcaggtt tatggggtaa tgattttaaa ctatcttttt
     4981 taggggtaat agattttata tttgggatgg tagggggtgg gtttatagtt atgttatggt
     5041 ttctaattcc agtgatatta tcaactttat tcagatggat atttcaaaat caacttgctg
     5101 tatctgtcat attaaccttc attgtttttt atacatatgg gtacttttct ttatttaatt
     5161 catctgaaag agtcggtagt ttttggtatt tggtaatccc aaccataatg tttattggac
     5221 tgtctgaatg gtttatctat aaatctagcg tgcatagttt aggtgaaaat gtaactccac
     5281 gttccaattg aagaaaaaga ttgtctgaaa actaaattta atttcagatg acctt
//
LOCUS       DAWKJW010000133         5311 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.133, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000133 DAWKJW010000000
VERSION     DAWKJW010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5311)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5311)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5311
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.133"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            73..354
                     /locus_tag="WJJ54_001564"
     CDS             73..354
                     /locus_tag="WJJ54_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ7342410.1"
                     /translation="MIHEEISAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKI
                     LFLDAATSHLDIANEKAVNANLNGLSIIKIMAAHRKETVESADRKMSLG"
     gene            complement(381..1601)
                     /locus_tag="WJJ54_001565"
     CDS             complement(381..1601)
                     /locus_tag="WJJ54_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HEZ7342411.1"
                     /translation="MTFLQRLQGLADNKICAFAWFVVRRFDEERVPQAAASMTFTTLL
                     ALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQANRLTA
                     IGSVMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGISFM
                     VGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFVPARQAFVGALATA
                     FCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQ
                     GEAFRRGFDSRGRFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLA
                     RHGYIYSGRQGWVLKTGADSIELNELFKLFVYRPLPVERDHVNQAVDAVMTPCLQTLN
                     MTLAEFDAQAKKRQ"
     gene            complement(1616..2041)
                     /locus_tag="WJJ54_001566"
     CDS             complement(1616..2041)
                     /locus_tag="WJJ54_001566"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342412.1"
                     /translation="MPSEHAAYADLMASSAKRLLCAKAILFSSAVRTGAAVGNIFFDG
                     FADGGDFGDGAQYGFATFNAVDAASDSAGGIAGAAVLEIVEDEDFEGDLGSWADSVKM
                     VRSSDGITVVPMPSETAAIQAFVPDGKIGYNIGHQCPTY"
     gene            2146..2805
                     /gene="queC"
                     /locus_tag="WJJ54_001567"
     CDS             2146..2805
                     /gene="queC"
                     /locus_tag="WJJ54_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEZ7342413.1"
                     /translation="MSNQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHA
                     VELERARWIAQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNAL
                     FLLYAAIYAKGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPL
                     MYLTKAQTWALADEMGALDYIREQTHTCYKGIVGGCRECPSCILRERGLAEYLESKKA
                     V"
     gene            2833..3351
                     /locus_tag="WJJ54_001568"
     CDS             2833..3351
                     /locus_tag="WJJ54_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1543 domain-containing protein"
                     /protein_id="HEZ7342414.1"
                     /translation="MPKLHMFYLGGNAGRSNIEVHDIQFAVCDDYREAVPTLKAAWFG
                     DADKIHIDGWQVVEWADGYDIAVSETPKTEMPSEHAPRLYFANVGGYRAGQLAEAHAF
                     GLFAAATPAEAKQKALQTLLTDSYVQQHKDNLKDVDNLLALDRIGNFHIRLTPNPHGK
                     PAEIGFQGYLPI"
     gene            3358..3780
                     /gene="queD"
                     /locus_tag="WJJ54_001569"
     CDS             3358..3780
                     /gene="queD"
                     /locus_tag="WJJ54_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HEZ7342415.1"
                     /translation="MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDDPVRGG
                     PKDGMVMDFTDLKAIVKQHITDPFDHAFIYHGGNGRESQIAALLEGWNMKTLRLPCRT
                     TAENMAVEMYDRLKNAGLNVCRVKLWETPTSCAEYEGE"
     gene            4049..4420
                     /locus_tag="WJJ54_001570"
     CDS             4049..4420
                     /locus_tag="WJJ54_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HEZ7342416.1"
                     /translation="MKLLSTLLVLLVTAEHFYIAWLEMTQIPSEKAAEIFKLPYEFME
                     QKRVQTLFGNQGLYNGFLGIGLVWSRFAAPDNAVYGATVLFLGFVLIAAAWGAFSSGN
                     KGILVKQGLPAFLAAAAVLAV"
     gene            4417..5055
                     /locus_tag="WJJ54_001571"
     CDS             4417..5055
                     /locus_tag="WJJ54_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HEZ7342417.1"
                     /translation="MKKINVAPENPQYRIVEIFESLQGEGWNTGMPAVFVRLGKCNLA
                     CGWCDTDYLTFGMMSLSDILGCLKTYAARNIIITGGEPTIQPHLDMLLDMLKAEGYFL
                     CIETNGLNPAPPQIDYVATSPKACYAAKYEKSCIETADEVRIVADGDVLAFCENMERK
                     IRAHHYYLSPCEQDGAMNIYDTIRQIGILNSRPDAPVHWQLSVQTHKWAGIE"
BASE COUNT         1359 a         1536 c         1325 g         1091 t
ORIGIN      
        1 tctagtacag ccccttgttt tttcgatacg gaaccggata gaggaaaaat cgaacattgc
       61 gcctgccttg ctatgattca cgaagaaatc tccgccatgc ctatgggcta tgaaaccttg
      121 atcggcgata tgggcagcgc actgtcaggc ggacaaaaac aacgcatcgt attggcgcgg
      181 gccttatatt gcgaaccgaa aatcctattt ttagatgcag cgaccagcca tttggatatt
      241 gccaatgaaa aagcagtcaa tgcaaacttg aatggcttgt ctatcataaa aattatggcg
      301 gcacacagaa aggaaacggt ggaatcagca gataggaaaa tgtctttagg ataaaaatac
      361 agtttcaaaa atactcaaga ctactgccgt tttttcgcct gagcgtcaaa ctctgccagc
      421 gtcatgttca aagtctgcaa acacggtgtc attaccgcat cgacagcttg gttcacatga
      481 tccctttcca caggcaacgg acggtaaacg aagagcttga agagttcgtt caactcaatc
      541 gaatccgccc ccgttttcaa cacccaaccc tgtctgccgg aatagatgta gccgtgccgc
      601 gccagctttt ccaaaagctc gcccaactcg tcgtagccca tattgatatg ccgtctgaac
      661 tcctgaacag gcaaggcttt gccttctttt tgcgccgcat ccagaagcag caggattttc
      721 aacacgtcgt caaaccgtcc gcgcgagtcg aagcccctgc ggaacgcttc tccctgccag
      781 taggagagtg aagaagtcag caccgcgccg cccaagacca gcgtccacaa caggttcagc
      841 cacaacagaa aaaacggcac ggcggcaaac gcgccgtaaa tcgagcggta gccgtcgaaa
      901 ttgcccatat accaagtgaa gagggagcgc gcggtttcca gacaaaacgc tgttgccaaa
      961 gccccgacaa acgcctgccg cgcgggaacg aagcggtttg gcacgaagcg gtacagcccc
     1021 cacagcaaaa gcgtcatgaa ggtcagcgtc gccgccgttc gcaacgcgcc cgaccactgc
     1081 ggcgcacctg aggcaagcgc ggcatcctgt accgagccga ccataaagga aatgcccacg
     1141 cccaaagaca gcggcccgaa cgtcagtaaa gcccaataga cgagaaactg catcatccac
     1201 ggacgctggg aattgacccg ccagatgcgg ttgaacgtat tgtctatcgt ccgaatcagc
     1261 atcagcgagg taacgaccag catcacgctg ccgattgccg tcagccggtt cgcctgctcg
     1321 cggaacgcat tgatatagtc gaacaccatg tccgcgccct gcggcacaat ggtttggttg
     1381 acgaaggaga cgaacgaatc cgaccagcgg tcgaacacgg ggaaaatcga agcgaccgcc
     1441 accatcacgg tcagcacggg gacgagtgcc agcagcgtcg taaacgtcat gcttgccgcc
     1501 gcctgcggta cgcgttcttc atcaaagcgg cggacgacga accatgcaaa cgcacagatt
     1561 ttattgtctg ccaaaccttg caaacgttgt aaaaaggtca taatttcttg cccggtcagt
     1621 aagttgggca ttgatgcccg atgttatagc caattttgcc gtcaggaaca aatgcctgaa
     1681 ttgcggctgt ttcagacggc atcggaacaa ctgttatgcc gtctgaagac cgaaccattt
     1741 taacggaatc cgcccatgaa cccaaatccc cctcaaaatc ctcgtcctct actatttcca
     1801 aaacggcagc acccgcaatc ccgcccgccg aatcgctcgc ggcatcgaca gcgttgaagg
     1861 ttgcgaagcc gtattgcgca ccgtccccaa agtctccgcc gtctgcgaag ccgtcaaaaa
     1921 agatattccc gacagcggct cccgtcctga ccgccgaaga aaacaatatc gccttcgcac
     1981 aaagcaaacg cttggcggaa ctcgccatca agtcggcata agccgcgtgt tcagacggca
     2041 tggcgttcag atgccgtctg aacgcgtttg cctgtataat ccgcgtcttt actgtccaac
     2101 ttcgcggttc gcaaacctcc cgcgttacca aaactaggat tcgatatgtc aaaccaaaaa
     2161 gccttggtca tcttttcggg cggtcaggat tcgaccacct gcctgattca ggcaatccaa
     2221 atctacgggc gcgaaaacgt ccaagccatt actttccaat acgggcaacg ccatgccgtc
     2281 gagctggaac gtgcccgctg gattgcgcag gatttgggcg tcaaacaaac cgtactcgac
     2341 ttgagcctga tgcggcagat tacgcacaat gccctgatgg acgacaccgc cgccatcgaa
     2401 actgccgaaa acggcgttcc gaataccttt gtagacggcc gcaacgcgct tttcctgctt
     2461 tacgccgcga tttacgccaa agggcagggg atacggcaca tcatcgcggg cgtgtgcgaa
     2521 accgacttct ccggctatcc cgactgccgc gacgtgtttg tcaaatcgat gaacgttacc
     2581 cttaatttgg cgatggacta tgattttcaa atccacacgc cgctgatgta tctgaccaag
     2641 gcgcaaacgt gggcgttggc ggacgaaatg ggcgcgctgg actatatccg cgagcaaacc
     2701 cacacctgct acaagggcat cgtcggcggc tgccgcgaat gcccgagctg tatcttgcgc
     2761 gaacgcgggc tggcggaata tctggaaagt aaaaaggccg tctgaacacg cgcaaaccat
     2821 aaggaatacg atatgcccaa gctccatatg ttttacctcg gcggcaatgc cggcaggtcg
     2881 aatatcgaag tgcacgacat ccaatttgcc gtgtgcgacg actaccgtga agccgtcccc
     2941 acactcaaag ccgcatggtt cggcgatgct gacaaaatcc acatcgacgg ctggcaggtt
     3001 gtcgaatggg cggacggtta cgacatcgcc gtatccgaaa cgcccaaaac ggaaatgccg
     3061 tctgaacacg ccccgcgcct gtattttgcc aatgtcggcg gttatcgcgc ggggcagctt
     3121 gccgaggcgc acgcgttcgg gctgttcgcc gccgccacgc ctgccgaagc caaacaaaaa
     3181 gccctgcaaa ccctgttgac cgacagctat gttcagcaac ataaagacaa cttaaaagac
     3241 gtggacaacc tgcttgcgct cgaccgcatc ggcaatttcc atatccgcct gaccccgaat
     3301 ccgcacggca aacccgccga aatcggcttt caaggctatt tgcccatttg agaacccatg
     3361 aaaatcacca aaatcttcac cttcgactcc tcgcatatgc tcgacgggca tgacggcaaa
     3421 tgccaaaacc tgcacgggca tacctacaaa ctcgaaatca ccgtttcaga cgaccccgtc
     3481 agaggcgggc cgaaagacgg tatggtgatg gactttaccg acttgaaagc cattgtcaaa
     3541 caacacatta ccgacccctt cgaccacgcc ttcatctacc acggcggcaa cgggcgcgaa
     3601 tctcaaatcg ccgcgctttt ggagggctgg aacatgaaaa ccctgcgcct gccctgccgc
     3661 accactgccg aaaatatggc ggtcgaaatg tacgaccgtc tgaaaaacgc ggggctgaac
     3721 gtgtgccgcg tcaaattgtg ggaaacgccg acatcgtgtg cggagtatga aggggagtag
     3781 ggaatatctt gaacgtatcg atatagtaaa ttccaataag acatgcccaa ccgcgtcatt
     3841 cccgcgcagg cgggaatcca gaccttggtt tttcaggaat atttaaaaat tgcagcaatt
     3901 ccaaatcttt ggattcccgc ctgcgcggaa aggacggttt agagcgtcct tatttgaatt
     3961 taccgtaaaa cggttttttc tcctgtacgg attccccgtt ttttcagacg accctccata
     4021 tcaaatacac ccattaaaag gaatacccat gaaacttctc tccaccctct tagtcctcct
     4081 tgtcaccgcc gaacatttct acatcgcctg gcttgaaatg acgcagattc ccagcgaaaa
     4141 agcggcggaa atattcaagc tgccttatga atttatggaa caaaagcgcg tgcagaccct
     4201 gttcggcaac caagggctgt ataacggctt tctcggcatc gggctggtgt ggtcgcggtt
     4261 tgccgctccg gataacgcgg tgtacggcgc aacggtactg tttctcggct tcgtcctgat
     4321 tgccgccgcg tggggcgcgt tctcttccgg caacaaaggc atactcgtca aacaaggttt
     4381 gcccgcattt ttggcagcgg cggcggtgtt ggcggtatga aaaaaatcaa tgttgccccc
     4441 gaaaatcccc aataccgcat cgtcgaaatc tttgaaagcc tgcaaggcga aggctggaac
     4501 acgggcatgc ccgccgtttt cgtccgcttg ggcaaatgca acctcgcctg cggctggtgt
     4561 gataccgatt atttgacatt cggcatgatg agcctgtccg acatcttagg ctgtctgaaa
     4621 acctatgccg cccgcaacat catcatcacc ggcggcgaac cgaccataca gccgcatctc
     4681 gatatgctgc tggacatgct caaggcggaa ggttatttcc tctgtatcga aaccaacgga
     4741 ctcaatcccg cgccgccgca aatcgactat gtcgccacca gccccaaagc ctgctatgcc
     4801 gccaaatacg aaaaaagctg tatcgaaaca gccgacgaag tgcggattgt tgccgatggt
     4861 gatgtccttg cgttctgtga aaatatggaa cgcaaaatcc gcgcgcatca ttactacctt
     4921 tcgccctgcg aacaagacgg tgcgatgaac atctacgaca ccatccgcca aatcggtatt
     4981 ttaaacagtc gccccgacgc gccggtgcat tggcagttga gcgtgcagac gcacaaatgg
     5041 gcgggaatag agtagtttaa gcagtgtaac tcaaagggcc ggcgtaccgt tttgccgatg
     5101 tctaacatat gggaaaagtg tgccgcttcc gcgtgaaact gcccacattt ccgctgcctg
     5161 attgaggcgg aaccttactg aataagatgc cgccgttggg tacaagcccg gcttcctaaa
     5221 ttccgatggt cttttgaacc ttgccgatac tctgtgccag tgcgcgcaaa tggcagggtt
     5281 agggaaaacg aaatgccgtc tgaaacagca t
//
LOCUS       DAWKJW010000134         5296 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.134, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000134 DAWKJW010000000
VERSION     DAWKJW010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5296)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5296)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5296
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.134"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(241..2988)
                     /gene="tbpA"
                     /locus_tag="WJJ54_001572"
     CDS             complement(241..2988)
                     /gene="tbpA"
                     /locus_tag="WJJ54_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein TbpA"
                     /protein_id="HEZ7342418.1"
                     /translation="MQQQHLFRLNILCLSLMTALPAYAENVQAGQAQEKQLDTIQVKA
                     KKQKTRRDNEVTGLGKLVKTADTLSKEQVLDIRDLTRYDPGIAVVEQGRGASSGYSIR
                     GMDKNRVSLTVDGLAQIQSYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSV
                     EQGSGALAGSVAFQTKTADDVIGEGRQWGIQSKTAYSGKNRGLTQSIALAGRIGGAEA
                     LLIHTGRRAGEIRAHEDAGRGVQSFNRLVPVEDTHPYANFIVEEECESGNYETCKSKP
                     KKDIVGKDERQTVSTRDYTGPNRFLADPLSYESRSWLFRPGFRFENKRHYIGGILEHT
                     QQTFDTRDMTVPAFLTKAVFDANKKQAGSLSGNGKYAGNHKYGGLFTNGENGALVGAE
                     YGTGVFYDETHTKSRYGLEYVYTNADKDTWVDYARLSYDRQGIGLDNHFQQTHCSADG
                     SDKYCRPSADKPFSYYKSDRVIYGESHRLLQAAFKKSFDTAKIRHNLSVNLGFDRFGS
                     NLRHQDYYFQNAKRAYSLKTPPKNGNKNISPNGSTSTPYWVSIGGGNVVTGQICLFGN
                     NTYTDCTPRSINGKSYYAAVRDNVRLGRWADVGAGLRYDYRSTHSDDGSVSTGTHRTL
                     SWNAGIVLKPADWLDLTYRTSTGFRLPSFAEMYGWRAGVQSKAVKIDPEKSFNKEAGI
                     VFKGDFGNLEASWFNNAYRDLIVRGYEAQIQNGKETAKGDPAYLNAQSARITGINVLG
                     KIDWNGVWDKLPEGWYSTFAYNRVHVRDIKKRADRTDIQSHLFDAIQPSRYVVGLGYD
                     QPEGKWGVNGMLTYSKAKEITELLGSRALLNGNSRNTKATARRTRPWYIVDVSGYYTI
                     KKHFTLRAGVYNLLNYRYVTWENVRQTAGGAVNQHKNVGVYNRYAAPGRNYTFSLEMK
                     F"
     gene            complement(3075..5228)
                     /locus_tag="WJJ54_001573"
     CDS             complement(3075..5228)
                     /locus_tag="WJJ54_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ7342419.1"
                     /translation="MNNPLVNQAAMVLPVFLLSACLGGGGGSFDLDSVDTEAPRPAPK
                     YQDVSSEKPQAQKDQGGYGFAMRLKRRNWYPQAKEDEVKLNESDWEATGLPTEPKKLP
                     KRQKSVIDKVETDSDSNIYSSPYLTQSNHQNGNTGNGINQPKNQAKDYENFQYVYSGW
                     FYKHAKREFNLRGEPKSAKNGDDGYIFYHGKEPSRQLPASGKITYKGVWHFATDTKKG
                     QKFREIIQPSKSQGDRYSGFSGDDGEEYSNKNKSTLTDGQEGYGFTSNLQVDFDNKKL
                     TGKLIRNNANQNNTNNDKPTTQYYSLEAQVTGNRFNGKATATDKPKNDGETKEHPFVS
                     DSSSLSGGFFGPKGEELGFRFLSDDKKVAVVGSAKTKDKAESGKTVAASGGTDAAASN
                     GAAGTSSENSKLTTVLDAVELKLGDKEVQKLDNFSNAAQLVVDGIMIPLLPEASESGN
                     NQANQGTNGGTAFTRKFDHTPESDKKDAQAGTQTNGAQTASNTAGDTNGKTKTYEVEV
                     CCSNLNYLKYGMLTRKNSKSAMQAGGNSSQADAKTEQVEQSMFLQGERTDEKEIPKEQ
                     NVVYRGSWYGHIANDTSWSGNASDKEGDNRAEFTVDFADKKITGKLTAENRQQATFTI
                     EGDIKDNGFEGTAKTADSGFDLDQSNNTRTPKAYITDAKVQGGFYGPKAEELGGWFAY
                     PGDKQTEKATATSSDGKSASSATVVFGAKRQQPVR"
BASE COUNT         1078 a         1340 c         1328 g         1550 t
ORIGIN      
        1 ctttcgcggg aatgacggga tttgaggttt ctgtttttga ttttctgttt tcgcgggaat
       61 gacggtttag aagttacccg aaacctcaaa aaaacctaaa ccgaacggtc tagattcctg
      121 cctgcgcggg aatgacgaat ttcaagatta cggtattgtc ggggatgatg gaaaacggtg
      181 ggaattgtgt aaaaaatgcc gtctgaagcc tttcagacgg catttgcggc gtttggacgt
      241 ttaaaacttc atttccaagc taaatgtgta gttgcgaccg ggggcggcat atcggttgta
      301 aacgccgaca tttttgtgtt ggttgactgc gccgccggca gtttgccgca cattttccca
      361 agtaacatag cggtagttga ggaggttgta cacgcccgca cggagggtaa agtgtttttt
      421 aatcgtgtaa taaccggaca catccacaat ataccaaggg cgggtacggc gcgcggtggc
      481 ttttgtattg cggctgttgc cgttgagcaa agcccggctg cccaacaact ctgtgatttc
      541 cttggctttg gaataagtca gcataccgtt cacaccccat ttgccttccg gttggtcata
      601 gcccaagccg acgacatagc gcgagggttg gatggcatca aacaggtgtg attgaatatc
      661 ggtgcggtct gcgcgttttt tgatgtcgcg gacatggaca cgattatagg caaatgtaga
      721 ataccaacct tcgggcaatt tatcccatac gccgttccaa tcgattttgc ccaaaacatt
      781 gatgccggta atccgcgcgc tttgggcatt gaggtaagcc gggtcgcctt tggctgtttc
      841 tttgccgttt tgaatttgcg cttcataacc ccggacaatc aaatcgcggt aggcattgtt
      901 gaaccaactt gcctccaagt tgccgaaatc gcctttaaac acgatgccgg cttctttgtt
      961 gaacgatttt tccggatcga ttttgaccgc cttgctttga acacccgccc gccagccgta
     1021 catttccgca aacgagggca ggcggaagcc ggttgaagtg cggtaagtca aatccagcca
     1081 gtcggcaggt ttgaggacga tgcctgcgtt ccaggacagg gtgcggtgcg tgccggtgga
     1141 aacgctgccg tcgtccgaat gcgtgctgcg gtagtcgtag cgcaagcccg cgccgacatc
     1201 cgcccacctg cccaaacgga cattgtcccg aactgccgcg taatagcttt tgccgttgat
     1261 gctgcgcggc gtgcagtccg tataagtatt gttgccaaag aggcagattt gccccgtaac
     1321 cacatttccc ccgcctatgc tgacccaata gggagtgctt gtgctgccgt tggggctgat
     1381 gtttttattg ccgtttttag ggggcgtttt caacgaatag gcgcgtttgg cattttgaaa
     1441 ataataatcc tgatggcgga gattagagcc aaagcggtca aatccgagat tcacgctcag
     1501 gttgtggcgg attttggcgg tatcgaagga ttttttgaat gccgcctgca agagcctgtg
     1561 gctttccccg taaatcacgc ggtcggattt gtagtaggaa aacggcttgt cggcactcgg
     1621 gcggcaatat ttgtccgaac cgtcggcaga acagtgcgtc tgctgaaaat gattgtccaa
     1681 accgatgccc tgccggtcgt aagagaggcg ggcataatcc acccaagtgt ctttatcggc
     1741 attggtatag acatattcca aaccgtagcg gcttttggtg tgcgtctcgt cgtaaaacac
     1801 gcccgtaccg tattccgcgc ccaccagcgc accgttttcg ccgttggtaa acagtccgcc
     1861 gtatttgtgg ttgcccgcgt atttgccgtt gccggacaaa gaacccgcct gttttttatt
     1921 tgcatcaaaa accgccttgg tcaggaatgc cggaaccgtc atatcgcgcg tgtcgaaagt
     1981 ttgttgcgtg tgttcgagta tgccgccgat gtagtgccgt ttgttttcaa aacgaaaacc
     2041 cgggcggaac agccacgacc ggctttcgta tgaaagcgga tcggcgagga agcggttggg
     2101 acccgtgtag tctcgggtag aaaccgtttg ccgttcgtct ttgccgacaa tatctttttt
     2161 cggtttgctt ttacacgttt cgtaattccc gctttcgcat tcttcttcaa cgatgaaatt
     2221 tgcgtacgga tgggtatcct caaccggcac cagcctgtta aagctctgaa cgccgcgtcc
     2281 tgcatcttcg tgggcgcgga tttcccccgc gcgccgaccc gtgtggatca gcaaagcctc
     2341 cgcaccgccg atgcgccccg ccagcgcgat ggattgggta agcccccggt ttttgccgga
     2401 ataggcggtt ttactctgaa tgccccactg cctgccttcc ccgataacat cgtcggcggt
     2461 tttggtttga aatgcgaccg agcccgccaa tgcgccgctg ccttgttcga ccgagtttga
     2521 gcctttgctg atttcgacag ctttgacgtt ttcatactcg atttcattga ttgcgccgct
     2581 gctgcccgcc gtcctcgtcc cgcccaatgc cgcctgcgcg gtgtaggact gtatttgcgc
     2641 caagccgtcc accgtcaagg aaacgcggtt tttgtccata ccgcgtatcg agtagcccga
     2701 gcttgcgccg cgcccctgtt cgacgacggc gatgccgggg tcgtaacgcg tcaggtcgcg
     2761 gatatcgagt acctgttcct tgctgagggt gtcggcggtt ttgaccaatt tgcccaaacc
     2821 ggttacttcg ttatcgcggc gggttttctg ttttttggct tttacctgta tggtatccaa
     2881 ctgtttttcc tgtgcttgtc cggcttgcac attttctgca taagcaggca gcgcagtcat
     2941 cagcgacagg cataaaatat ttaatcggaa caaatgttgc tgttgcataa tgtttcccta
     3001 atcttcgctt tcagacggca tcggaaggag cgatgccgtc tgaagcctta ttcttgattg
     3061 ttcggcaacc gtgcttatcg cacaggctgt tggcgtttcg caccgaatac cacggtcgcg
     3121 ctgcttgctg attttccatc gctggatgta gctgttgcct tttccgtttg tttatcgccc
     3181 ggataggcaa accatccgcc caactcttcg gctttgggcc cgtaaaaacc gccctgcacc
     3241 ttggcatctg tgatatatgc cttaggcgtg cgggtgttat tgctttgatc gagatcaaaa
     3301 cctgagtcag cagttttcgc cgtaccttca aagccgttgt ccttaatatc gccctcaata
     3361 gtaaaggttg cctgctgcct gttttcagcg gttaacttgc cggtaatttt tttatcggca
     3421 aaatccacag taaattccgc cctgttgtcg ccctctttat ctgaagcatt gccgctccag
     3481 cttgtgtcgt tggcaatatg cccgtaccaa gacccccgat aaacgacgtt ttgctctttt
     3541 ggaatctctt tttcatcggt gcgctcgcct tggaggaaca tactttgttc aacttgttcc
     3601 gttttagcat cagcttgact actgtttcct cctgcctgca tcgcggactt gctgtttttg
     3661 cgcgtcaaca ttccgtattt cagataattg aggttggaac agcagacttc gacttcatag
     3721 gtttttgttt tgccattggt atcacctgcc gtatttgaag cggtttgcgc cccattcgtc
     3781 tgcgtacctg cttgggcgtc ttttttatca ctttccggcg tgtggtcaaa tttgcgggta
     3841 aaggctgttc cgccatttgt accttgattg gcttgattgt tcccactttc ggaagcctcg
     3901 ggcaagagcg gaatcataat gccgtcgaca accagttggg cggcgttgct gaagttgtcg
     3961 agcttttgga cttccttatc gcccaatttc agctcgaccg catccaaaac cgtggtcagc
     4021 ttactgtttt cagacgacgt gcctgccgca ccgtttgatg ctgccgcatc tgtgccgcct
     4081 gaagccgcca cagtcttgcc actttcggct ttgtctttgg ttttcgcgct gccgacaacc
     4141 gcaacttttt tatcgtcgct caaaaagcgg aaacccaatt cctcaccctt cgggccgaaa
     4201 aagccgccgc tcaaagaaga cgagtcggaa acaaaaggat gttccttggt ttcgccgtcg
     4261 tttttgggtt tgtcggttgc cgttgccttg ccgttgaagc ggttgcctgt tacttgagcc
     4321 tcaaggctgt agtattgggt ggtaggtttg tcattattag tattattttg gttcgcatta
     4381 ttgcgtatta atttacctgt caatttctta ttgtcgaaat ccacttgtaa attcgaggta
     4441 aaaccataac cctcttgacc atctgtcagc gtggatttgt ttttgttgga atattcttcg
     4501 ccgtcatcgc ccgaaaatcc gctatacctg tcgccttgac tttttgaagg ttggataatt
     4561 tcacgaaatt tttgaccctt ttttgtatcg gtcgcaaaat gccacacacc tttataggta
     4621 atttttccag aagcgggaag ttgtcgggaa ggttctttgc cgtgatagaa gatataaccg
     4681 tcgtcgccgt tttttgcact tttaggttcc ccccgtaagt taaactctcg tttggcatgt
     4741 ttgtaaaacc agccggaata aacatattgg aaattttcgt aatcttttgc ctgattttta
     4801 ggttggttta taccgttgcc agtgttgccg ttttgatggt ttgattgcgt gagatagggg
     4861 gaagaataaa tattgctgtc gctgtctgtt tctactttat caataaccga tttttgccgt
     4921 ttagggagtt tcttaggttc tgtcggcaat cctgtcgcct cccaatcact ctcgttcagt
     4981 ttaacctcgt cttcttttgc ctgcggatac caattcctcc gtttcaacct catcgcaaaa
     5041 ccgtatccgc cttggtcttt ttgggcttgc ggtttttcgg aagaaacatc ttgatacttt
     5101 ggcgcgggac gcggggcttc ggtatcgaca gaatcaagat cgaaactgcc gccgcctccg
     5161 cccagacaag cactcaacaa aaacaccggc agcaccatag cagcctgatt caccaatgga
     5221 ttgttcatat aaacctaatt caattaaaga atgataaaga ttattatttt atttattttt
     5281 aacaaatttg caaata
//
LOCUS       DAWKJW010000135         5268 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.135, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000135 DAWKJW010000000
VERSION     DAWKJW010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5268)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5268)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5268
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.135"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            111..806
                     /gene="pgl"
                     /locus_tag="WJJ54_001574"
     CDS             111..806
                     /gene="pgl"
                     /locus_tag="WJJ54_001574"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HEZ7342420.1"
                     /translation="MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRS
                     PIAFFNALSQKDLDWKNVGITLADERIVPTVHADSNTGLVREYLLKNKAEAAMWIPMV
                     EDGKTETELHPDAVVDYALKHYKQPDVLVLGMGNDGHTASIFPKAPQFQTAIDGSAGV
                     ALVHTTPVTAPHERVSMTLDAIAHTGHVFLAIRGEEKKAVFDQAAQGENREYPINLVL
                     NHQGVNCHVFYAE"
     gene            787..1773
                     /locus_tag="WJJ54_001575"
     CDS             787..1773
                     /locus_tag="WJJ54_001575"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HEZ7342421.1"
                     /translation="MSSTPNKQAGYPRLVADIGGTNARFALETAPRVIEKAAVLPCKD
                     YDTVTDAVRAYLNQSGATAVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQTLGLDT
                     LILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSHAGWV
                     ALAGEGGHTSFPPFDDMEVLIWQYAKNKYGHVSAERFLSGAGLSLVYEALAAKQKAKP
                     AKLMPSEITEKALSGASPLCRQTLDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRV
                     LEYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGISGAAAALDNHLRNV"
     gene            1823..2671
                     /gene="hexR"
                     /locus_tag="WJJ54_001576"
     CDS             1823..2671
                     /gene="hexR"
                     /locus_tag="WJJ54_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HEZ7342422.1"
                     /translation="MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASV
                     SQPTVIRFCRSLGYKGLPEFKLALSASIGHEGMPYVHEELNADDDMASVVEKVLGNAA
                     ASLLGERRFLKESELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYV
                     DTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKENGASVIALTRNDSPLAQLA
                     DCVLSVATQENAELYTPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKH
                     IDYDKD"
     gene            2792..4438
                     /gene="pgi"
                     /locus_tag="WJJ54_001577"
     CDS             2792..4438
                     /gene="pgi"
                     /locus_tag="WJJ54_001577"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEZ7342423.1"
                     /translation="MKHLHDLPAWSKLWNHFDDSKTLHMREMFEQDPQRAERYWLQVG
                     GLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRT
                     NSPIVVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPL
                     MMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNAL
                     TAREWFLNHAGDEEAVAKHFAAVSTNQKAVAEFGIDTANMFEFWDWVGGRYSLWSAIG
                     LPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPVILALIGIWYINYYGGGSHVIA
                     PYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQ
                     GTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMRGKTPDEVRAELKAQGMDEA
                     RIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIAMYEHKTFVQGIIWGINSFDQWGV
                     ELGKQLAKTILGELTGETGPQKHDSSTERLINLYLQTNRK"
     gene            4452..5003
                     /locus_tag="WJJ54_001578"
     CDS             4452..5003
                     /locus_tag="WJJ54_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HEZ7342424.1"
                     /translation="MPSERRPFQTAFLSNRKTVGKLAERVQSRYDGLHKFKHICSAAM
                     ALIKEPLDKAKQRNEELEAAEEAAAQEALGREQEVDRVSEWEERYKLSRSEFEQFWKG
                     LPQTVQNKLQASQKTWKSGMDKICANNAKAEGETPNGIKFSELACKTAETEARLEELH
                     NRKKALIDEMAREADKKELPKRL"
BASE COUNT         1340 a         1467 c         1393 g         1068 t
ORIGIN      
        1 agcagtcccg atatttggta tcaaaagcat aaacaactgt tcggccgaca tattgctcaa
       61 cccgtttcca taacggaata tgccgtctga aataaaaaaa ggacacaaat atgtttgttt
      121 ggcacgaata cgaaaatgcg gcagaagcgg cgcagtcttt ggctgacgca gtggcggatg
      181 ctttgcaggg cgcactggac gagaagggcg gtgcggtgtt ggcagtttcc ggcggacgtt
      241 cgccgattgc atttttcaac gccctgtcgc aaaaagattt ggattggaaa aacgtcggca
      301 tcaccttggc agatgaacgc atcgtgccga ccgtccacgc cgacagcaat accggtttgg
      361 tgcgcgaata cctgttgaag aacaaagcgg aagcggcaat gtggattcct atggtggaag
      421 acggaaaaac tgaaaccgaa ttacatcccg atgctgttgt cgattatgca ctgaaacatt
      481 acaaacagcc cgatgttttg gttttgggta tgggaaacga cgggcatacg gcttcgattt
      541 tcccgaaagc tccgcagttt cagacggcaa tcgacggttc ggcaggtgtc gcgctggtgc
      601 ataccacgcc cgttaccgcg ccgcacgagc gcgtcagtat gaccttggat gcgattgccc
      661 atacggggca tgtgtttttg gcgatacggg gcgaagagaa aaaagccgtg ttcgaccaag
      721 ccgcacaagg cgaaaaccgc gaatatccga tcaacctcgt tttgaaccat caaggagtga
      781 actgccatgt cttctacgcc gaataaacaa gccggatatc cccgactggt cgccgatatc
      841 ggcgggacga atgcacgctt tgcgctggaa accgcgccgc gcgtcattga aaaagccgcc
      901 gtgcttccgt gtaaagacta cgatacggtt accgatgcgg tgcgtgccta tctgaatcaa
      961 agcggtgcaa cagccgtacg gcacgcggca tttgccatcg ccaacccgat tttgggcgac
     1021 tgggtgcaga tgaccaacca ccattgggcg ttttccatcg aaaccacccg tcagactttg
     1081 gggctggaca ccctcatcct tttgaacgac tttaccgcgc aggcattggc ggtaacgcag
     1141 acttcaagca aagacctgat gcaggtaggc gggcaaaagc ctgtcgaatt tgcccccaaa
     1201 gccgttatcg gccccggtac cggcctgggc gtgagcggat tggtgcacag ccacgcaggc
     1261 tgggtggctt tggcgggcga gggcgggcat accagtttcc cgccgtttga cgatatggaa
     1321 gtgctgattt ggcagtacgc caaaaacaaa tacggccatg tttccgccga acgctttttg
     1381 agcggcgcgg gcttgagctt ggtttacgag gctttggctg caaaacagaa agccaaaccc
     1441 gccaaactga tgccgtctga aatcacggaa aaggctttga gcggcgcgtc gcctttgtgc
     1501 cgtcagactt tggacatctt ctgcgccatg ctcggcacgg ttgcttccaa cctcgccctg
     1561 acgctgggcg cgcgcggcgg cgtgtacctg tgcggcggca ttattccccg cgtgttggaa
     1621 tatttcaaaa cttccccgtt ccgcagccgt ttcgagaaca agggcaggtt tgaagcatat
     1681 cttgccgcga ttcccgtgta tgtcgtcttg agcgagtttc ccggaatttc cggtgcggct
     1741 gcggctctcg acaaccattt gagaaacgtt taaccacagc ggctccttgc agcggggctg
     1801 cattatcgaa gggcatatca ttatgttaag caaaatcagc gaatcactgg caaacctttc
     1861 cggtgcggaa cgcaaagtcg ccgaatgtgc attggcggaa cccaaatggt tcgtccatgc
     1921 cgccgttgcc gaaattgccg aacgtgcgtc cgtcagccag ccgaccgtca tccgattctg
     1981 ccgcagcttg ggttataaag ggctgcccga gttcaagctc gccttgtccg ccagcatcgg
     2041 tcatgagggt atgccctatg tccacgaaga actcaacgcc gacgacgata tggcaagcgt
     2101 ggtcgagaaa gtgttgggca atgccgccgc ctcgctgttg ggcgaacgcc gcttcctgaa
     2161 agagtcggag ctggaaaacg ccattgccac gctgatgcac gcccgtcgcg tcgagtttta
     2221 cggtgtcggc aattccggca ttgtggcaca ggacgcgcag cataaatttt tccgtttcgg
     2281 catgtccacc gtcgcctatg tcgatacgca cacgcagctg atggcggcat ctgttttgag
     2341 cgatcaggat gttttggttg ccatttccaa cacgggttcg tctatcgaac ttttggatgc
     2401 ggtcagcatc gccaaagaaa acggcgcgtc tgtcatcgca ctgacccgca acgattcgcc
     2461 tctggcgcaa cttgccgact gcgtgttgag cgttgccaca caggaaaatg ccgaactcta
     2521 cacgcccatg gtttcccgcc tcttgcagct tgccgtcatc gacattctcg ccatcggact
     2581 tgccctgcgc ttgggcgatg ctgccagcct gcaattgcag aaaagcaaaa aaagcataca
     2641 caacaagcac atcgattacg acaaagattg accttcagac ggcatcccac aaatgccgtc
     2701 tgaaatgccg aacaacggtc gtcggcggct tgcggcagtt tccggcagcc ttttcatccc
     2761 acaacaaaaa acctcattca ggagcatata gatgaaacac cttcacgact tacccgcatg
     2821 gtcgaaattg tggaaccact ttgacgacag caaaacattg catatgcgcg aaatgttcga
     2881 gcaagacccg cagcgtgcgg aacgctactg gctgcaagtc ggcggactga cgctggacta
     2941 ctccaaaaac cgcatcaacg acgaaaccat gtcgcttttg ttcgagcttg cccgagaagc
     3001 aggcgtgccg gagcggatgc ggcagatgtt ccacggcgaa aaaatcaata ccaccgaaaa
     3061 ccgcgccgtc ctgcatgtcg cccttcgcaa ccgcaccaat tcgccgattg tggttgacgg
     3121 tgaagatgtg atgcccaaag tcaaccgcgt tttgcaacgt atgggcgaat ttgcacacga
     3181 agtccgcagc ggaagctggc tgggctatac caaccaagtc attaccgacg ttgtcaacat
     3241 cggcatcggc ggatcggatt tgggcccgct gatgatgtgt accgcgctca aacctttcgg
     3301 tcatccgcgc ctcaatatgc acttcgtctc caacgtggac ggctcgcaac tgcgcgacgt
     3361 attgtccaaa gtccaccccg aaaccacgct gttcatcatc gcctccaaaa catttaccac
     3421 gcaggaaacg ctgaccaacg cgctgaccgc gcgcgaatgg tttttgaatc atgcgggcga
     3481 cgaagaagcc gttgccaaac acttcgccgc cgtttccacc aatcaaaaag ccgtcgccga
     3541 attcggcatc gacaccgcca atatgtttga attttgggat tgggtcggcg gtcggtacag
     3601 cctgtggtcc gccatcggat tgccgattat gctgtatctc ggcgaagaaa acttcatcga
     3661 aatgctcaac ggcgcgcacc tgatggacca acacttcatc aacacaccgc tcgagcgcaa
     3721 cctgcccgtc attctcgccc tcatcggcat ctggtatatc aactactacg gcggcggcag
     3781 ccacgtcatc gcgccttacg accaacattt gcaccgcctg cccaaattca tccagcagct
     3841 cgatatggaa agtaacggca aacaggttac gttggacggc aaagcagtcg gacacgaaac
     3901 ctcgccgatt atctggggcg aaacgggcat taacggccag cacgccttct tccaactgct
     3961 gcaccaaggc acgcacatta cccccatcga cctgattgcc tcacttgaaa aacgcagcaa
     4021 cctgcccgga caccacgaaa tcctgcttgc caacgtcttt gcacaagcag aagcctttat
     4081 gcgcggcaaa acccccgacg aagtccgtgc cgaactcaaa gcgcagggta tggatgaggc
     4141 gcgcatcgaa gagctggtcc cgcacaaaac cttctccggc aaccgcccga ccaacctcat
     4201 tctcatggac aaggtcaacc cgcgcaatat gggcagcctg attgccatgt acgaacacaa
     4261 aaccttcgta caaggcatca tttggggcat caacagcttc gaccagtggg gcgtggaact
     4321 cggcaaacaa ctggctaaaa ccattttggg cgaactgacc ggcgaaaccg ggccgcaaaa
     4381 gcacgacagt tcgaccgaac gcctgatcaa cctctacctg cagaccaacc gcaaataaaa
     4441 cctgcggaaa aatgccgtct gaacgccgac cgtttcaaac ggcattttta tcgaacagga
     4501 aaaccgtcgg taaacttgca gagcgtgtgc aatcccgata tgatggtttg cataaattta
     4561 aacatatatg ttccgcagct atggcactga ttaaagagcc gttggacaaa gcgaaacaaa
     4621 ggaacgaaga acttgaagcg gcagaagaag cggcggcgca ggaggcattg ggtcgggagc
     4681 aggaagtcga ccgcgtatcc gaatgggaag aacgctacaa gctgtcgcgc agcgagttcg
     4741 agcaattctg gaaaggattg cctcaaaccg tacagaataa gctgcaagcc tcacagaaaa
     4801 catggaaaag cgggatggat aaaatctgtg ccaacaatgc gaaagctgaa ggtgaaacgc
     4861 caaacggcat aaaattcagc gaactggcat gcaaaacggc ggaaaccgaa gcacgcttgg
     4921 aagagctgca caaccgtaaa aaagccctta tcgacgaaat ggccagggaa gcggacaaga
     4981 aagaactgcc aaagcggctc tgaacagcgc ggttcaggca ctgcccgccg atattgccga
     5041 aaccgtcatg cccgagtacc gcaactgaca aaacggtttg aatgccaaat gcgccgacgg
     5101 cgacgaatac ggcgtggcac aatctgactg ccgtaccaga gaaatcaatg cgaaaaccaa
     5161 agaaatccaa ggttatctga ttgactgaaa cttggatgcg ggaatgtcgg cggcttttgc
     5221 gtttttgtcg tttttatagt gaattaaatt taaaccgata catcgttg
//
LOCUS       DAWKJW010000136         5238 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.136, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000136 DAWKJW010000000
VERSION     DAWKJW010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5238)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5238)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5238
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.136"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            91..1566
                     /locus_tag="WJJ54_001579"
     CDS             91..1566
                     /locus_tag="WJJ54_001579"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HEZ7342425.1"
                     /translation="MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYT
                     YLLESVVGGERFGRYSFIGLPCSHYLKASGKHVDVYQNGEIVEQHDGTPLPFIEAFHN
                     RFKTPEIPSLPRFTGGLVGYFGYETIYNFEHFAHRLKNTAKADSLGTPDILLMLSQEL
                     AVVDNLSGKIYLIVYADPSQPDGYERARERLEDIRTQLRQSCAIPLSLGSKHTEAVSE
                     FGEEPFKACVNKIKDYIFAGDCMQVVPSQRMSMEFTDSSLALYRALRTLNPSPYLFYY
                     DFGDFHIVGSSPEILVRRERNDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEH
                     VMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGRLKEGVTNMDILAAT
                     FPAGTLSGAPKVRAMEIIEEVEPSKRGIYGGAVGVWGFNNDMDLAIAIRTAVVKNNTL
                     YVQSGAGVVADSNPESEWQETQNKARAVIHAAQMVQEGLDK"
     gene            1563..2108
                     /locus_tag="WJJ54_001580"
     CDS             1563..2108
                     /locus_tag="WJJ54_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
                     /protein_id="HEZ7342426.1"
                     /translation="MTYEKLYELRQTLRPTTKDGLYTDNEKNREILTVRWSGNTENPK
                     NFSAVAIGINPSKANDERSDKTLTQLARFLDMYGFTNFKMLNIFSSYSTQQTGIRANT
                     QTDFSKFKGCLEDADMIILAWGTDRGAYKDEKNRILEFLKAEKFMEKVFCISETGNSS
                     DTRHPSRISYSYQLVQFEESA"
     gene            2105..3241
                     /locus_tag="WJJ54_001581"
     CDS             2105..3241
                     /locus_tag="WJJ54_001581"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEZ7342427.1"
                     /translation="MKNISLSPPAMLGILGGGQLGRMFTVAAKTMGYKVTVLDPDPDA
                     PAAEFADCHLCAPFNDQAALDELAKCAAVTTEFENVNADAMRFLAKHTNVSPGSDCVA
                     IAQNRIQEKAWIRKAGLQTAPYQVVCKAEDITEASAQFLPGILKTATLGYDGKGQIRV
                     KTVDELKAAFAEHGGVDCVLEKMVDLRSEISVIVCRLNNDNVQTFDPAENIHENGILA
                     YSIIPARLSADVQQQARQMAQRLADELDYVGVLAVEMFVVGDTHELVVNEIAPRPHNS
                     GHHTIDACAADQFQQQVRLMCNLPPADTKLLSSCCMANILGDVWQEDGGKPDWFPLQS
                     RPDARLHLYGKKTAHKGRKMGHFTVLTTDSDTAFQEAKKLHQSL"
     gene            3288..3770
                     /locus_tag="WJJ54_001582"
     CDS             3288..3770
                     /locus_tag="WJJ54_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ7342428.1"
                     /translation="MNLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWEG
                     LLNTESYLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGTAL
                     LHQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIKIKCELMRKHL
                     "
     gene            3876..4931
                     /locus_tag="WJJ54_001583"
     CDS             3876..4931
                     /locus_tag="WJJ54_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ7342429.1"
                     /translation="MKTYAPVLYTAALLTACSPAADSNHPSGQNAPANTESDGKNITL
                     LNASYDVARDFYKEYNPLFIKTYQSEHPGTSVSIQQSHGGSSKQALSVANGLQADVVT
                     MNQSSDIDLLEKKGLVEKGWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGV
                     NIVIANPKTSGNGRYAFLGAYGYGLKTTNGNEQEAQKLVASILKNTPVFENGGRAATT
                     TFTQRNIGDVLITFENEANYVSKKLTQGQFEIVYPSYTISAESPVAVVNSVVAKKGTQ
                     KTARAYLEYLWSEPAQELAASLYLRPRNPEVLARHKADFPDLDTFSPEEKFGGWDNIM
                     KTYFADGGIFDRLTAQK"
BASE COUNT         1494 a         1595 c         1112 g         1037 t
ORIGIN      
        1 cctctcggtc agactgtcaa caattccgat aaaatgctat actcgcgccc gttgccgcgc
       61 cgtccgaaac cgccctttgg gaaagcagaa atgatcagca aacaagaata ccaagcccaa
      121 gccgcccaag gctacaaccg catcccgctc gtgcaagaac tccttgccga tttggatacg
      181 ccgctttccc tctatctcaa actcgccaac cgcccctata cctacctgct cgaatccgtt
      241 gtcggtggcg aacgtttcgg ccgctattct tttatcggcc tgccttgcag ccactatctc
      301 aaagccagcg gcaaacacgt cgatgtttat caaaacggcg aaattgtcga gcaacacgac
      361 ggcacccccc tgccctttat cgaagccttc cacaaccgct tcaaaacacc cgaaatccca
      421 agcctgccgc gctttaccgg cggactggtc ggctacttcg gttacgaaac catctacaat
      481 ttcgaacact tcgctcaccg cctgaaaaac accgccaaag ccgactcgct cggcacgccc
      541 gacatcctcc tgatgctctc gcaagagctt gcagtagtgg ataacctaag cggtaaaatc
      601 tacctgattg tttacgccga tccgtcgcag cccgacggct acgaacgcgc acgcgaacgc
      661 ctcgaagaca tccgtacaca gttacgccaa agttgcgcca tcccgctttc gctcggcagc
      721 aaacacaccg aagccgtcag cgaattcggc gaagagccgt tcaaagcctg cgttaacaaa
      781 atcaaagact acatctttgc aggcgactgc atgcaggttg tccccagcca gcgcatgagc
      841 atggaattca ccgacagctc gctcgccctc taccgcgcct tgcgcacgct caacccttcg
      901 ccttatctct tctactacga tttcggcgat ttccacatcg tcggctcctc gcccgaaatc
      961 ctcgtccgac gcgaacgcaa cgacgttatc gtccgcccca tcgccggtac gcgcctgcgc
     1021 ggcaaaaccc ctgccgaaga ccttgccaac gaacaagatt tgttaagcga cgccaaagaa
     1081 atcgccgaac acgtcatgct catcgattta ggacgcaacg acgtcggccg catcagtaaa
     1141 accggcgaag tcaaagttac cgacaaaatg gtgattgaaa aatactccca tgtgatgcac
     1201 atcgtttcca acgtcgaagg ccgtctgaaa gagggcgtta ccaatatgga catcctcgcc
     1261 gccacgttcc ctgccggcac actttccggc gcacccaaag tccgcgccat ggaaatcatc
     1321 gaagaagtcg aaccaagcaa acgcggcatc tacggcggcg ccgtcggcgt atggggtttc
     1381 aacaacgaca tggatttggc aatcgccatc cgcaccgccg tagtaaaaaa caacacgcta
     1441 tacgtccaaa gcggcgcagg cgtagttgcc gattccaatc ctgaatcaga atggcaggaa
     1501 acgcagaaca aagcccgtgc cgtcatacac gccgcgcaaa tggtacagga agggttggat
     1561 aaatgactta tgaaaaactt tatgagcttc gccaaacact cagaccgact accaaagacg
     1621 gtctctatac agataatgaa aaaaatcgag aaatcctaac ggttagatgg agcggcaaca
     1681 cagaaaatcc taaaaatttc tcagctgtcg ctataggaat taatccaagt aaagcaaatg
     1741 atgaaagaag cgacaaaacc cttacccaac ttgcacgttt cttggatatg tacggtttta
     1801 ccaacttcaa aatgttaaat attttttcca gttactctac acagcaaaca ggaattaggg
     1861 caaacaccca aaccgatttt tccaaattta aaggatgttt ggaagatgct gatatgatta
     1921 ttcttgcatg gggtacagac cgcggtgctt ataaggatga aaaaaacaga atactggaat
     1981 ttctaaaagc agaaaaattt atggaaaaag tattctgtat ttctgaaact ggtaattcca
     2041 gcgatacaag acatccgtca agaattagtt atagctatca acttgtacaa tttgaagagt
     2101 cagcatgaaa aacatatctc tttctccgcc cgccatgctt ggcatcctcg gcggcggaca
     2161 attaggcaga atgtttaccg ttgccgccaa aaccatgggc tacaaagtaa ccgttctcga
     2221 ccccgatccg gacgcgccgg cagcagaatt tgccgactgt catttatgcg cgccgtttaa
     2281 cgaccaagct gctttggacg aattggcaaa atgcgcggcg gtgaccactg aatttgaaaa
     2341 cgtcaatgcc gatgcgatgc gttttctcgc caaacacacc aatgtttccc ccggcagcga
     2401 ctgcgttgcc atcgcgcaaa accgcattca ggaaaaggca tggatacgca aagcaggatt
     2461 gcaaaccgcg ccgtatcaag tggtttgtaa ggctgaagac attactgaag caagtgcgca
     2521 attcttgccc ggcatcctga aaacggccac tttgggctac gacggcaaag gtcaaatccg
     2581 cgtcaaaacg gtggatgaac tcaaagctgc gtttgccgaa cacggcggcg tggattgcgt
     2641 tttggaaaaa atggtggatt tgcgcagtga aatttccgta atcgtatgcc gtttgaacaa
     2701 tgacaacgtg caaactttcg accctgccga aaacatccac gaaaacggca tcttggctta
     2761 ttccatcatc cccgcgcgac tgagtgccga cgtgcagcaa caggcgcggc agatggcgca
     2821 acgcttggcg gacgaattgg attatgtcgg cgtattggcg gtagaaatgt ttgttgtcgg
     2881 tgacacacat gaattggtcg tcaacgaaat cgcgccgcgt ccgcacaact ccggccacca
     2941 taccatcgat gcctgcgcgg cagaccaatt ccagcaacag gtccgcctga tgtgcaacct
     3001 gccacctgcc gataccaagt tgctttcttc atgctgtatg gcgaatattt tgggcgacgt
     3061 ttggcaggaa gacggcggca aaccggattg gtttcccctg caaagccggc cggacgcgcg
     3121 cctgcacctt tacggcaaaa aaaccgcgca caaagggcgg aaaatgggac actttaccgt
     3181 tttaaccacc gattcggaca ccgcatttca agaagcaaaa aaactgcatc agtccctata
     3241 atccgaccaa cggcacagat gccgtctgaa gccgccgaca tactgccatg aacctgctga
     3301 cactgttacg ccccgccacc gtgcaagact gcaaagacat cttcaaagtc cacctgcact
     3361 ccgtccaata cacctgcatc ctcagctaca acgaacacgc cctaaaagta tgggaaggct
     3421 tgctaaacac agaaagctac ctgccgacca tttccgatcc cgacaaagca ctttgggttg
     3481 ccgaatacaa aggcaacata cagggatttt tccaaatcga ctgccaagaa gcacaactcg
     3541 atgcgcttta cgtccacccc ctgttccaca acctcggact gggcactgcc ctgcttcatc
     3601 aggcggaaac catcgcccac aaatccggtt tgagctttct gaaactctac gcatcgctca
     3661 actccgtccc gttttacctt ctcaaccgct acgaatcgct cggttcggca gtattgcagc
     3721 ttgaccccag catcaaaatc aaatgcgaac tgatgcggaa acacctctga tccgtcctta
     3781 taaccaaaac tgataatctt caaatcaaac attatttcca caagcgcaga cagccgtata
     3841 aagttgcccc atctaccaac cgacaggaca agcatatgaa aacctacgca ccggtactct
     3901 ataccgcagc cctgctcacc gcctgcagcc ccgcagccga ttcaaatcat ccgtccggac
     3961 aaaatgcccc ggccaatacc gaatccgacg gaaaaaacat taccctgctc aacgcctcat
     4021 acgatgtggc acgggatttt tacaaagaat acaacccctt atttatcaaa acataccaat
     4081 ccgaacaccc cggcacatcc gtcagcatcc aacagtccca cggcggctcc agcaaacagg
     4141 cattatccgt agccaacggc cttcaagccg atgtcgtaac catgaaccaa tcctccgaca
     4201 tcgacctgct cgaaaaaaaa ggactggtag aaaaaggctg gcaacaagcc ctccccgacc
     4261 acgccgcgcc ctacaccagc actatggttt tccttgtccg aaaaaacaac cccaaacaga
     4321 tccgcgattg gaacgacctt gccaaagacg gcgttaacat cgtcatcgcc aatcccaaaa
     4381 cctcgggcaa cggacgctac gccttcctcg gcgcatacgg ttacggtctg aaaaccacca
     4441 acggcaacga acaggaagcc caaaaactcg tcgcatccat cctcaaaaac acccccgttt
     4501 ttgaaaacgg cggacgcgcc gccaccacca ccttcacaca acgcaacatc ggcgacgtac
     4561 tcatcacttt tgaaaacgaa gccaactacg tcagcaaaaa actgacccaa ggacagtttg
     4621 aaatcgtcta tccgagctac accatttccg ccgaaagccc cgtcgccgtc gtcaacagcg
     4681 tcgtcgcgaa aaaaggcacg caaaaaaccg cccgcgccta tctcgaatac ctttggagcg
     4741 aaccggcgca agaactcgcc gcctcactct acctgcgccc ccgcaacccc gaagtattgg
     4801 caagacacaa agccgacttc ccagacttag acaccttctc tcccgaagaa aaattcggcg
     4861 gatgggacaa catcatgaaa acctacttcg ccgacggcgg catattcgac cgcctgaccg
     4921 cacaaaaatg accgctatac cgtctgaacc gcctttcaga cggcatttca cacatcaaaa
     4981 cagaaaaacc gcgcccaaaa tcatcatcac aggacacaac ggcaaaccgg atacaaaacc
     5041 caacaccgcc gccaaaatgc cgtctgaagc cgtcggcgca accatcctta tctggggccc
     5101 gcttcagggg cgcataactt tccttaacca tccttttgac agccaaataa acagtgcttt
     5161 tgcctgtcag aaacaaaacc aatattttgc ggttcgtatc ggaacattta tagtggatta
     5221 acaaaaacca gtacagcg
//
LOCUS       DAWKJW010000137         5192 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.137, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000137 DAWKJW010000000
VERSION     DAWKJW010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5192)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5192)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5192
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.137"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(139..1494)
                     /locus_tag="WJJ54_001584"
     CDS             complement(139..1494)
                     /locus_tag="WJJ54_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HEZ7342430.1"
                     /translation="MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISTDIDVLNQ
                     NIYNKITTVGKDLVATAKYLSAKYGVPIVNQRISVTPIAQIAAATHADSYVSVAQTLD
                     KAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMKTTDIVCSSINVGSTRAGINM
                     DAVKLAGETIKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVS
                     GPGVVKAALENSDATTLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLA
                     PTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPV
                     SEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMI
                     NSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPVKEGSCEVFVNRGGRIPAPVQSMK
                     N"
     gene            complement(1509..1781)
                     /locus_tag="WJJ54_001585"
     CDS             complement(1509..1781)
                     /locus_tag="WJJ54_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEZ7342431.1"
                     /translation="MNNSVITVIGKDRVGIVYDVSKILAENRINILNISQQLMDDFFT
                     MIILVDTSKCPKSRQEVLDLFAEESKKLALDIRMQNEEIFQAMHRI"
     gene            complement(1907..2644)
                     /locus_tag="WJJ54_001586"
     CDS             complement(1907..2644)
                     /locus_tag="WJJ54_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HEZ7342432.1"
                     /translation="MKKLSRIVFSIVLLGFSAALPAQTYSVYFNQNGKLTATMSSAAY
                     IRQYSVAAGIAHAQDFYYPSMKKYSEPYIVASTQIKSFVPTLQNGMLILWHFNGQKKM
                     AGGFSKGKPDGEWVNWYPNGKKSAVMPYKNGLSEGTGYRYYRNGGKESEIQFKQNKAN
                     GVWKQWYADGSIKTEMVMVNDEPVKILTWDENGRLLSELSIRHHKRNGVVLEWYEDGS
                     KKSEAVYQDDKLVRKTQWDKDGYLIEP"
     gene            complement(2925..3824)
                     /gene="prmB"
                     /locus_tag="WJJ54_001587"
     CDS             complement(2925..3824)
                     /gene="prmB"
                     /locus_tag="WJJ54_001587"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEZ7342433.1"
                     /translation="MFNQAAQELTTIRDILRFAVSRFNEAGLFFGHGTDNAHDEAAYL
                     ILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQGEFDFYV
                     DERVIVPRSFIYELLGDGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAV
                     DVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPE
                     EYLHEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHNRDVLEAAYPELPFT
                     WLETSGGDGFVFLLTREQLLGEE"
     gene            3969..4562
                     /locus_tag="WJJ54_001588"
     CDS             3969..4562
                     /locus_tag="WJJ54_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342434.1"
                     /translation="MADGMGNLIGWEKTGLVVGKQWITAKDDKVSDVCNANGEMGVIG
                     LYEPFSHGALTIPGHPNCRCEVVSVSGGELGEFAEKKELRKAAMQYARDNFIGKSYVN
                     ENSGHELKVTWQGVKHATSKANQAELSIITKLDDLLRYAKYEGSYSDKKGHPDIIAAH
                     KYRAVAKVGNESLNIGVIVREFPDDHKHYDHFILKDE"
     gene            4674..>5192
                     /locus_tag="WJJ54_001589"
     CDS             4674..>5192
                     /locus_tag="WJJ54_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HEZ7342435.1"
                     /translation="MTKLYAEIAKMETQDDGTVKVWGYASSEAVDSDGEVIAAAAMKA
                     AIPDYMKFGAEREMHGSNAAGTAIEINVEDDGRTFFVAHIVDPVAVTKVKTGVYKGFS
                     IGGSVTAHDELNKSQITGLKLTEISLVERPANPDAVSTCFKADKGAETVNNDTEHNAT
                     YFSHFPSKQKSTD"
BASE COUNT         1435 a         1329 c         1151 g         1277 t
ORIGIN      
        1 ataattctaa cttaatttga atttccctag ttatctagga cagccccata ttcttttcta
       61 aagacatttt acccgatgcc tataaacaaa aatgccgtct gaagcctttc agacggcatt
      121 tccccatcaa aaccgcaatc agtttttcat cgattgaacc ggtgcgggaa tcctgccgcc
      181 ccggttgacg aacacttcgc atgagccttc tttgaccggc attacaggcg cgtagcccaa
      241 caggccgccg aactcgacgc tgtcgccgac ggttttaccg gttaccggaa taatgcgcac
      301 ggcagtggtt ttgctgttga tcatgccgat ggcggcttcg tcggcaatga tgccggaaat
      361 ggtgtgcgcg ggtgtgtcgc cgggaacggc aatcatatcc aagccgaccg aacaaacggc
      421 ggtcatcgct tcgagtttat ccaacgtcag cacgcctgct tcggcggcgg caatcatacc
      481 ttcgtcttcg gaaacgggga taaacgcgcc actcaaaccg ccaaccgcgc tcgaagccat
      541 catgccgccc tttttcacgg catcgttcag caatgccaaa gctgctgttg tgccgtgcgt
      601 accgcagacg ctcaaaccca tttcttcaag aatgcgcgcc accgagtcgc cgacggcagg
      661 ggtcggtgcc agcgacaagt cgagaatacc aaacgggata ttcagcattt ttgaggcttc
      721 gcggccgatg agttcgccca cgcgggtaat tttgaaggcg gttttcttca caacttcggc
      781 aacttcggtc aatgtcgttg catccgaatt ttccaacgcg gcttttacga cacctgggcc
      841 ggatacgccg acattaatca cagcatccgc ttcgcccgat ccgtgaaacg cacccgccat
      901 aaacggattg tcttccaccg cattgcagaa cacgacgatt ttcgcgcagc cgaaaccttc
      961 gggcgtaatt tcagccgtgc gtttgatggt ttcgcctgcc agcttgaccg catccatatt
     1021 gataccggcg cgcgtactgc cgacattgat ggagctgcac acgatgtcgg tggtcttcat
     1081 cgcttcggga atggaacgga ttaacacctc gtctgaaggc gacatgcctt tttgcaccaa
     1141 cgcggaaaag ccgccgataa aggacacgcc gatggctttg gcagccttat ccaaagtttg
     1201 cgccacgctg acataggaat cggcatgggt agccgccgcg atttgggcaa tcggcgtaac
     1261 ggaaatgcgc tgattcacaa tcggcacgcc gtatttggca gacagatatt ttgccgtcgc
     1321 caccaagtct ttgccgaccg tggtaatttt gttgtaaatg ttttggttta acacgtcgat
     1381 gtcggtgctg atgcagtcgt gcaaatcaat gccgatggta atggtgcgga catcgaaatt
     1441 ctggtcggca accattttga cggtttctaa aatttcgccg gattggatac tcatcacatt
     1501 cctccgactc aaatgcggtg catcgcttgg aagatttctt cattttgcat acggatatca
     1561 agcgcgagtt ttttgctctc ttccgcaaac aaatccaaaa cctcctgccg agatttgggg
     1621 catttcgagg tatccaccaa gataatcatg gtaaaaaaat catccatcag ctgttggctg
     1681 atattaagga tgttgattcg gttttccgcc aaaattttgg aaacatcgta cacgatgccg
     1741 acgcggtctt tgccgatgac ggtgatgact gaattgttca caggcttact ccttgcagat
     1801 atccgttaaa gtccgaaatt ataccaccgt tggattttga agaaatattg tcaacaatat
     1861 atacatacaa aatgccgtct gaaactattt cagacagcat caagattcag ggttcgatta
     1921 aataaccatc cttatcccac tgggttttcc tgaccaactt atcatcctga taaacagcct
     1981 cgctcttttt agaaccatct tcataccact ccaagaccac cccgttgcgt ttatggtggc
     2041 ggatagacag ctccgagagt aatcggccgt tttcatccca agtgagaatc ttgacaggtt
     2101 catcgttgac cataaccatt tccgtcttga tactgccgtc ggcataccat tgcttccata
     2161 cgccgtttgc cttattttgc ttaaactgga tttcgctttc cttaccgccg ttacggtaat
     2221 aacggtatcc cgtaccttca ctcaaaccat ttttataagg cataaccgca gattttttac
     2281 cgttcggata ccagttgacc cactccccgt ccggtttacc cttgctgaag ccccccgcca
     2341 tttttttctg accattaaaa tgccacaaaa tcaacatacc gttttgcagg gtaggcacaa
     2401 aagatttgat ttgcgttgaa gcaacgatat aaggttcgga atatttcttc atcgacggat
     2461 aataaaaatc ctgcgcgtgt gcgatacccg ccgccacact atattgcctg atataagcgg
     2521 cagaagacat cgtcgccgtc agtttcccgt tctgattaaa ataaacagaa taggtctgcg
     2581 ccggcaaagc ggccgaaaaa cccaacagta cgattgaaaa tacaatccga gataattttt
     2641 tcattgcaat agcgatataa aaacaaggct gtgttttagt aatctgttga tttcaattat
     2701 ttgcaaggga aaagacaatt attttccggt taggaataaa cctattctat tgaatagatt
     2761 gaagccaagt acgcctatca acactatatt aaaacactgc caaaaacaat taacttataa
     2821 acaatatggt aaggatttct ctgccaagca tcaaacccga gacaacgtat cgtaaaaatg
     2881 ccgtctgaaa acaaatcgtc ttcagacggc atttcccctt caactcactc ttcacccaat
     2941 aactgctcgc gcgtcaagag gaaaacaaaa ccgtcgcccc cgctggtttc caaccaagta
     3001 aaaggcaact ccggatacgc tgcttccaat acatccctgt tatgcccgat ttccaccagc
     3061 aatacacctt tgggattcag aaactttgcc gcattcagaa gaatctgcct ggtggcatcc
     3121 aacccgtccg ccccgctgcc caatgccaat tccggttcgt gcaaatactc ttcaggcaat
     3181 aactcaaccg attccgcatc cacataaggc ggattggaaa caatcaaatc ataagtgcct
     3241 tccaatcctt caaacaaatc cgtatgaata agccggatgc gttcttccaa accataatct
     3301 tcgacattga tccctgccac ttccaaagca tccaagctca catcaaccgc atcaatttgg
     3361 gcatcaggat aatgatgcgc catctgaatg gcaaggcatc cgcttccagt gcaaagatcc
     3421 aaagcattat gcaccagctc atcgtattct atccaaggac gaagtccgtc acccagcaat
     3481 tcataaataa aagagcgcgg cacaatcacg cgttcatcta cataaaaatc aaactctccc
     3541 tgccatgcct ggtgtgtcaa ataagcggct ggaatgtgtt cgacagcacg acgctcaata
     3601 accgccagca cttcctcttt ttcagcttcc aagagttttg catcaagata tggggcaagc
     3661 atatccaaag gcaaattcaa agtatgcaga atcaaataag ccgcttcatc atgcgcatta
     3721 tctgttccat gaccaaaaaa gagccctgcc tcattaaaac ggctgactgc aaaacgtaaa
     3781 atatcgcgga tagtcgtcaa ttcttgtgct gcctgattaa acataatatg aaccattctg
     3841 cgtatagata cttttaatta taacagaaac aacaagcaaa ccttttcata tcgccaaata
     3901 accacccaat ctacccatac aactacataa atgcccgcgc gaaaaccatc gcccgaacgg
     3961 aaacgacaat ggccgacggt atgggcaatc tgattggctg ggaaaaaacg gggcttgttg
     4021 tcggtaagca gtggataacc gcaaaagacg acaaggtatc cgatgtctgc aatgccaacg
     4081 gcgagatggg cgtaatcggg ctttacgagc ctttctcaca cggcgcattg acgatacctg
     4141 gtcatccgaa ctgccgatgc gaggttgttt ccgtatcggg tggcgaattg ggggaatttg
     4201 ccgaaaaaaa ggagcttcgt aaagcggcta tgcagtatgc gcgggataac tttatcggca
     4261 aaagctatgt caatgaaaac agcgggcatg aactgaaggt aacttggcaa ggtgtgaaac
     4321 acgctacgtc aaaggcaaat caggcggaat tatccatcat aacaaaactt gatgacttat
     4381 tgcgctacgc aaaatatgag ggttcttatt cggataagaa aggtcatcct gatattattg
     4441 cagcacataa gtatcgtgcc gttgccaagg ttgggaatga gtctttaaat atcggtgtga
     4501 ttgtaaggga atttccagac gaccataaac attacgacca tttcatcttg aaggatgaat
     4561 aaagcccttt tgcagtgtcg ttctggagcg gatagcgtta aggcaagtac acttccagcc
     4621 ttgaaaaagg gctttaaatt cagcatgcca tttatacagg caggagtaaa cccatgacaa
     4681 agttatacgc agaaatcgcc aagatggaga cgcaggacga cggcacggtc aaggtttggg
     4741 gttacgcttc aagcgaggcg gtcgattccg acggcgaagt catcgcggcg gcagctatga
     4801 aggcggcgat tcccgattat atgaagtttg gcgcggagcg cgagatgcac ggctcaaacg
     4861 ctgcgggaac ggcaattgaa atcaacgtgg aagatgacgg cagaaccttt ttcgtggcgc
     4921 atatcgtcga tcccgttgcc gtgacgaagg tcaaaacagg cgtttacaag ggcttttcca
     4981 tcggcggcag cgttaccgcc cacgatgagt tgaacaagtc gcaaatcacg ggtttgaagc
     5041 tgacggaaat cagccttgtc gagcgccctg ccaatcccga tgcggtgtct acctgcttta
     5101 aggcggacaa aggtgcggaa acggtaaaca acgatacaga acataatgct acatatttta
     5161 gccatttccc ttccaaacaa aaaagcaccg ac
//
LOCUS       DAWKJW010000138         5032 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.138, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000138 DAWKJW010000000
VERSION     DAWKJW010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5032
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.138"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(29..670)
                     /locus_tag="WJJ54_001590"
     CDS             complement(29..670)
                     /locus_tag="WJJ54_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEZ7342436.1"
                     /translation="MPSEKPMNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLAL
                     GDSLTFGYGANPGESYPAQLQKLTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIV
                     GIGGNDFLRKVPKEQTRANIAKIIETVQKENIPAVLVGVPHITLGALFGHLSDHPLYE
                     DLSEEYGIPLFGGAWAEILGDNNLKSDQIHANGKGYRKFAEDLNQFLRKQGFR"
     gene            complement(660..1211)
                     /locus_tag="WJJ54_001591"
     CDS             complement(660..1211)
                     /locus_tag="WJJ54_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEZ7342437.1"
                     /translation="MNYCEFAASLPENTDNPNKHYHDTQYGFPIEDDNELFERLVLEI
                     NQAGLSWTLMLKKQQAFQTAFERFDIDTVAAFDEADIERLLADAGIVRNRLKIDAAIF
                     NARQIQALQQEYGSFKNWLDTHHPRSKDEWVKLFKKHFKFVGGEIVGEFLMSTGYLKG
                     AHAESCPVYRETLKYHPKWLDAI"
     gene            complement(1215..1733)
                     /locus_tag="WJJ54_001592"
     CDS             complement(1215..1733)
                     /locus_tag="WJJ54_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HEZ7342438.1"
                     /translation="MRLFPIAAALTLAACGTVQSTQYFVLPDSRYIRPATQGGETAVE
                     VRLAEPLKRGGLVYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPAS
                     RSGSTEKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
                     QGLKQAAQQMVE"
     gene            complement(1733..3394)
                     /gene="pqiB"
                     /locus_tag="WJJ54_001593"
     CDS             complement(1733..3394)
                     /gene="pqiB"
                     /locus_tag="WJJ54_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HEZ7342439.1"
                     /translation="MTDNSPPPNGHAQARVRKNNTLLSAVWLVPLIALIAGGWLWVKE
                     IRNRGPVVTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVS
                     GLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAI
                     GQSGLRLNLIGKNDRILNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKL
                     IHSASRFWLESGINIETTGSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTL
                     YDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLH
                     LFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMI
                     ELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFDKLPLDKTVAELN
                     GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQSPIYG
                     DVQNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKDPIPKGSR"
     gene            complement(3387..4847)
                     /locus_tag="WJJ54_001594"
     CDS             complement(3387..4847)
                     /locus_tag="WJJ54_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HEZ7342440.1"
                     /translation="MGSAVGGQPLEKIFLPDTKGLFILPNLPVLHPDWVYRLFSFIMP
                     PLIFATFPMKPFAENIPHSLRGNCRDEALPPHTVDCPECGCRADVPQLDRGEAAFCPR
                     CGYKLFRVGRHPFSAPPAYAAASLILMAFAYGMTYIEVGIPGAASVLSLPEMMRLMVF
                     QDYGFLAEVMFVLTFGAPVLFLLLCLYVYAALIRKQAYPALRLATRVMVRLRQAMMVD
                     VFFVSTLVAYIKLSSVAEVRFGSAFYLMFALSVMLIRTSVSVPQHWVYFQIGRLTGDN
                     AVQTASEGKTCCSRCLYFRDSAESPCGVCGAELYRRRPKSLSISSAFLTAAVILYFPA
                     NILPIMISSNPAATEVNTILNGIAYMWDEGDRLIAAVIFSASILVPVLKIAAMAVLIA
                     SARFALPTGAKKLSHLYRITEAVGRWSMIDIFVIIILMCSFHTYAARVIPGSAAVYFC
                     LVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKYD"
BASE COUNT         1149 a         1282 c         1407 g         1194 t
ORIGIN      
        1 aacaacttgg gtgcggataa acctttgttt atctaaaccc ctgttttctc aaaaattgat
       61 tcaaatcttc ggcaaatttc cgatagcctt tgccgttggc gtggatttgg tcggatttca
      121 gattattatc gcccaaaatt tccgcccacg cgccgccgaa cagcggaatg ccgtattcct
      181 cggacaaatc ctcatacagc ggatgatcgc tcaaatgccc gaacaacgcg cccaaggtaa
      241 tgtgcggcac gccgacgagg acggcgggga tgttttcctt ctgcacggtt tcgatgattt
      301 tcgcgatatt ggcgcgggtc tgctccttgg gaactttgcg cagaaagtcg ttgccgccta
      361 tgccgacaat cacaagcttg ggtttgcgtg ccaacagcgc gggcaggcgc gacagggctt
      421 gggcggatgt atcgcccgat acgccgccgt tgacaatatt ccaacccgtc agtttttgca
      481 gttgcgcggg gtaggattcg ccagggtttg cgccgtagcc gaaggtaagc gaatcgccca
      541 aggcaagtac ggtgcttcct tcgggaattt tggcgtgggt tcgggcggat tttctgccgc
      601 aggcggtaag gagcaacgcg cctgcgccga ggaggaaggt tcttctgttc attggttttt
      661 cagatggcat cgagccattt cgggtggtat ttcagggttt cacggtaaac cggacagctt
      721 tcggcgtgcg cgcctttgag gtagccggta ctcatcagaa attcgccgac gatttcgccg
      781 ccgacgaatt tgaaatgttt tttaaagagt ttaacccatt cgtctttgct tcgcggatgg
      841 tgcgtgtcga gccagttctt gaacgagccg tattcttgtt gcaacgcttg gatttgccgt
      901 gcattgaaaa tggcggcatc gattttcagg cggttgcgga cgatgcccgc atcggcaagc
      961 agccgctcaa tatcggcttc gtcaaatgcg gcaaccgtat cgatgtcgaa cctttcaaat
     1021 gccgtctgaa atgcctgctg cttcttcagc atcagcgtcc agctcaatcc tgcctgattg
     1081 atttccaaca ccagccgctc aaacaattca ttgtcgtcct caatcggaaa accgtattgc
     1141 gtgtcgtgat aatgtttgtt cgggttgtcg gtgttttcgg gaagtgaggc ggcaaattcg
     1201 caatagttca cggtttactc gaccatctgt tgcgccgcct gttttagtcc ctgttcgagt
     1261 gcggcggtca tcgcggcgta gccgtcaccc tgctgttcgg tttcgatatg gaagggtctg
     1321 ttcgtgccgt cgggtaggac ggcgtagccg ctgatgaggg ttttgcccgt gtagctgcct
     1381 tggaatgcgt caatatagac cgtccatttt tcggtactgc cgctgcgtga ggcaggaaca
     1441 aagatgcgtg tgctgtccaa acggttgaat gcattgctca acgccgcttc gagcatatcg
     1501 tccaaggtgt ccgcccaaac gtggttttgt gcggtgttga ggcggtaggg gtcggtttga
     1561 tagaccagtc cgccgcgttt gagcggttcg gcaaggcgga cttcgacggc ggtttcgccg
     1621 ccttgcgttg cagggcggat gtagcggctg tcgggcaaca cgaaatattg tgtgctttgc
     1681 acagtaccgc aggcggcaag cgtcagggcg gcggcgatgg ggaagaggcg cattatcggc
     1741 ttcctttcgg gatagggtct ttgctgctgc tgttgaaaat cagcgcgttg ggtttttctt
     1801 tcaaagtgtt aatgacgggt tgaacgtctt ttaaggtttt gtccaaactt tgcagcgtat
     1861 tttgtacgtc gccgtagata ggcgattgag gcgatacgcc ttgcagggtt gtgcgcaact
     1921 ctttcagggt ttggttcagt tcgttcggaa tgttttgtgt ctgcggtttg ccgaccagtt
     1981 tgtcgatgga gcttagggcg gcattggcag atttgagtgt ggatttgagc tcggcaagcg
     2041 aaccgttcaa ttcggcaacc gtcttatcta aaggcagttt gtcgaacttg tccagcaaat
     2101 ccgccaattt gacctgcaaa tcgtccaaac cgccgccctg ggtcgcgata acggtatcgc
     2161 ctgcataaac ggtatgcggt cgcagcttgg gcgaagacga aggctgatcg ttcaactcaa
     2221 tcattttgct gccggtcagc aggttgttgc tggagatggt ggcggtcagg cctttgttta
     2281 aggccgtctg aaattgttgt ttccaatgtt ctttgctttg ctcgtcggca ttgatttcca
     2341 aacgggaagg ctcgatgcgg atgcgtacgg gaatccaacc gttttcaaac agatgcaggc
     2401 tgtcgttgcg gtcgaaataa gggacatcgg aaaccacgcc gacattcagc cctttgtact
     2461 cgacgggcga accgacggtc agtccgcgca cggattgttt gaaaaacgcg gtgtaataca
     2521 gcgagcggtc gtcaggcagg ttggcgactt cgctgcggct gtcgtaaagc gtgaagctgt
     2581 cttcgctttt gacgttttta ctgtttttgg ttttcggcga atcaaatgaa atcgcgcccg
     2641 acagcagggc aggcagaggg gcggaattga gtttgatgcc gctgcctgtg gtttcgatat
     2701 tgatgccgct ttccagccaa aaacggctgg cggaatgaat cagtttgtcg ttggggcttt
     2761 ggatgaagat ggtgtaatgc acgctttggt cggacgggtc gaaatgcgcg ctttcgactt
     2821 gcccgaccat aaagttttca tacaaaacag ggctgttgac gttgaggatg cggtcgtttt
     2881 taccaatcaa attcaagcgc agcccgcttt gcccgatggc ggtaacgggc ggaatgtcct
     2941 gcacttggaa cacgtctttt gcctcgtcgc ttttgccggg tgtaaaggcg atgtacgaac
     3001 ccgaaagcag cgtacccaaa ccggttacgc cgctttggtc gatacgcggc ttgaccaccc
     3061 aaaactgggt atcgctgcgg atgaggccgg atacgtccgc attgagttgg gcggttactt
     3121 ccacgccttt ttggtcgtcg cgcagtttga ttcgggtaac gcgtccgaca tcgatgctca
     3181 atactttgat gaccgtattg ttgacctcaa tgccttccgc gctgtccatc aagagcgtaa
     3241 ccacaggccc cctgttgcgg atttccttaa cccaaagcca gccgccggca atcagcgcga
     3301 tcagcggaac cagccagacg gcggagagca aggtgttgtt tttgcggacg cgtgcttggg
     3361 cgtgtccgtt tggaggaggg ctgttgtcag tcatattttt ccgtttcgtt gaaagcaatg
     3421 ccgtctgaag cgcgtttgtc ccaaagcagg cgcgggtcga aataataggc ggacagcatc
     3481 gtcagaatca cgaccaggca gaaatagact gccgcactgc ccggaatgac gcgcgcggca
     3541 taagtgtgga acgaacacat caaaataata atcacaaaaa tatcaatcat cgaccagcgg
     3601 ccgaccgctt cggtaatgcg gtagaggtgc gacaatttct ttgcgcctgt cggcaaagcg
     3661 aagcgggcgg acgcaatcag aaccgccatt gccgcaatct tcagcaccgg caccaaaata
     3721 ctcgcgctga aaataaccgc cgcaatcagc ctgtcgccct cgtcccacat ataagcgatg
     3781 ccgttaagga tggtattgac ctccgtggcg gcaggattgg acgaaatcat aatcggcagg
     3841 atattggcag ggaaatacaa aataaccgcc gccgtcagaa acgccgacga aatactcaga
     3901 cttttcggcc gtcggcggta cagttccgca ccgcacacgc cgcaggggga ttcggcactg
     3961 tcgcggaaat acaggcagcg gctgcaacag gttttacctt ccgatgccgt ctgaaccgca
     4021 ttatcccccg tcagccgccc gatttgaaaa tacacccaat gctggggaac cgataccgaa
     4081 gtccgaatca gcataaccga cagcgcgaac atcagataaa acgccgatcc gaagcgaacc
     4141 tctgccacag acgagagctt gatatacgcc accaaagtgg aaacaaaaaa cacatccacc
     4201 atcatcgcct gtctcaagcg caccatcaca cgcgttgcca aacgcagcgc aggatacgcc
     4261 tgtttccgta tcagcgcggc atagacatac aggcacagca gcagaaacag aaccggcgcg
     4321 ccgaaggtca gcacaaacat cacttcggcc aaaaaaccat aatcctgaaa caccatcagg
     4381 cgcatcatct cgggcagcga aaggacggat gccgcacccg gtattccgac ctcgatatac
     4441 gtcataccgt aagcaaacgc cattaaaatc agcgaagccg ccgcataggc gggcggggcg
     4501 gaaaaaggat gcctgcccac cctgaagagc ttatagccgc agcgcgggca gaacgccgcc
     4561 tcccccctgt ccaattgcgg cacatccgcg cggcagccgc attccgggca atctaccgta
     4621 tgcggcggca gggcttcatc gcggcagttg ccgcgaaggc tgtgggggat attttcggca
     4681 aacggcttca tcgggaaagt ggcaaatata agtggcggca ttataaagga aaaaaggcga
     4741 tacacccaat caggatgcaa aaccggcagg ttcggcagta tgaacaaacc cttggtgtcc
     4801 ggcaaaaata ttttttcgag cggctgtccg ccgactgccg aacccatttg ataaaatccc
     4861 gattctgtaa agaatagtaa aatacctgct taaaaacatc acgaaaatga tatttttcca
     4921 aaaatatgtg ataataaatt tcgtttatga ttctttatta tttttatagt ggattaacaa
     4981 aaatcaggac aaggcggcga agccgcagac agtacaaata gtacggaacc ga
//
LOCUS       DAWKJW010000139         4940 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.139, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000139 DAWKJW010000000
VERSION     DAWKJW010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4940)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4940)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4940
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.139"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(615..1151)
                     /locus_tag="WJJ54_001595"
     CDS             complement(615..1151)
                     /locus_tag="WJJ54_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEZ7342441.1"
                     /translation="MDLREVKLGGETIYEGGFVSISRDKVRLPNGNEGQRIVIRHPGA
                     ACVLAVTDEGKVVLVRQWRYAANQATLELPAGKLDVASEDMAACALRELAEETPYTTD
                     SVRLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLANDEDEITETVLMSKEEVRQALAND
                     EIKDGKTLIGLQYWLMKD"
     gene            complement(1185..1541)
                     /gene="folB"
                     /locus_tag="WJJ54_001596"
     CDS             complement(1185..1541)
                     /gene="folB"
                     /locus_tag="WJJ54_001596"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEZ7342442.1"
                     /translation="MDKIFLHGMKADTLIGVYGWERERLQTLIVDLDIGVPEKAGSDD
                     DIANTVHYAEVCETLRRHLKEQDFLLLEALAEYIADLVLGYFGAVWVRVKIVKPGILE
                     GVREVGVEIERGKRED"
     gene            1597..2199
                     /gene="plsY"
                     /locus_tag="WJJ54_001597"
     CDS             1597..2199
                     /gene="plsY"
                     /locus_tag="WJJ54_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEZ7342443.1"
                     /translation="MFNISAVAVSYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNV
                     LRSGKKKAAALTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAAVALAALVGHMWPVFF
                     GFKGGKGVATALGVLLALSPATALVCALIWLVMAFGFKVSSLAALTATIAAPLAALFF
                     MPHTSWIFATLAIAILVLLRHKSNILNLIKGKESKIGEKR"
     gene            2287..3132
                     /locus_tag="WJJ54_001598"
     CDS             2287..3132
                     /locus_tag="WJJ54_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HEZ7342444.1"
                     /translation="MLSYRHAFHAGNHADMLKHFTLFLVLQYFNRKDKPYWYIDTHGG
                     AGVYNLEGSEAQKVGEYRQGIALLRQAQNLPAELSDFAAHIQKILPSPELYCGSPWLA
                     QSLTRVGDKLRLFELHPTDFVHLQNNMGEAGLGKRGQVLREDGYKGLISLLPPPPRRA
                     AVLIDPPYEEKQDYWRVTETLKSALKRFESGCYLIWYPCLSREESRKLPEELKKLVPD
                     NYLHAELHVHAPKADGFGMHGSGMFVINPPYLLAEQLAANLPALTRLLAQDEGARYLL
                     DSKIR"
     gene            3378..4352
                     /locus_tag="WJJ54_001599"
     CDS             3378..4352
                     /locus_tag="WJJ54_001599"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEZ7342445.1"
                     /translation="MDTLTRFLPEHLQQNQLPEALGGVLLSVVSACTEINAKVRLGAL
                     AGVLGMAGTGNIQGEDQKKLDVIANNIMIDTLKANPAVAGLASEEEDSFVSAGENGRY
                     LVLFDPLDGSSNIDVNISVGTIFSILEKPEGALATESFLQTGRQQLAAGYILYGPQTQ
                     LVFTFGHGVYMFTLNAENEFVLTKEKPKVPESTKEFAINMSNRRHWLPPVQQYIDELL
                     AGETGTRGKNYNMRWVASMVAEIHRILMRGGVFMYPQDKRDPSKPGKLRLMYEANPMA
                     LILEQAGASASNARQDILGIRPESLHQRVAVIMGSSEEVDYLNRLHSK"
     gene            complement(4511..4729)
                     /locus_tag="WJJ54_001600"
     CDS             complement(4511..4729)
                     /locus_tag="WJJ54_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEZ7342446.1"
                     /translation="MFPEYRDLISKLKQENSRFARLFDEHNELDDKITGLVNNPVTSG
                     AETIDELKKAKLKLKDELYAILQKAAGK"
BASE COUNT         1291 a         1434 c         1018 g         1197 t
ORIGIN      
        1 aagtatccat atattctatc tttaattatt tcattatttt cttcattttc ttcatctaaa
       61 aatatacatc tttttaatag ttccccatta aattcataaa catcgtaata agctttaaaa
      121 atagatatca tatcatttcc ttatcttcca taaatcggct tcggttgttt aaataccgcc
      181 cgtgccaatt accgttctca aattcaaatt gggcttttag gtctataaca aagaaaaagc
      241 cttggcagga taaacctacc aaggcttttt attaaaaaaa acgctctatt actgtgtcta
      301 aaaatgcaaa aaaagtaacc atcataaccc ttttgccaaa atcaatatca tcttccgatg
      361 aatgaattga cggtatataa gaaagaatta ataagctcat aaaccggtaa gaaaaatcag
      421 taacaaagat tttcattatt aaccattctt aaaaatgatc acgttcgttt gggtaattat
      481 tatacccttt tccctcttat tactaaagca cgaatgactt taaaggacgc gcccagagac
      541 aagccgaaaa ggcatatctc atccgccaaa caaaatgccc gccaatctac tccggagggc
      601 agttcaacac cctgtcaatc cttcatcagc cagtattgca aaccgattaa tgtcttgccg
      661 tctttaattt catcgtttgc caatgcctga cggacttctt ctttcgacat caatacggtt
      721 tccgtaatct cgtcttcgtc attggcaagc gtactgccca aacgcacgcc ttccgcctcg
      781 aacagataca ttttttcgtt gcaaaaaccg accgccgtat aaaaactgta aagcaggcgt
      841 acgctgtcgg tggtataagg cgtttcttca gccagttctc gtaaagcgca tgctgccata
      901 tcctcgctcg ccacatccag cttgcccgca ggaagttcca atgtcgcctg atttgccgca
      961 taacgccact gccgcaccaa aaccactttc ccctcgtccg taaccgccaa cacgcatgcc
     1021 gcacccggat ggcggatgac gatacgctgc ccttcattgc cgttgggcaa cctgacctta
     1081 tccctgctga tactgacgaa accgccctcg taaatggttt cgccgcctaa ttttacttcc
     1141 ctcaaatcca cttcatatct cctttccgtt tcctattctg ccgttcaatc ttcacgcttg
     1201 ccgcgctcga tttccacgcc aacctcgcgc acgccttcca aaatacccgg cttgacgatt
     1261 ttcacgcgca cccacaccgc gccgaaatat cccaaaacca aatcggcaat atattccgcc
     1321 aacgcttcca aaagcaggaa atcctgttct ttcagatgtc ggcgcagcgt ttcgcatacc
     1381 tcggcataat gcaccgtatt ggcaatatcg tcgtccgaac ccgctttctc gggaacaccg
     1441 atgtccaaat cgacaatcag ggtctgcaac cgttcgcgct cccagccgta cacgccgata
     1501 agcgtatccg ccttcatacc gtgcaaaaag attttatcca taatccgccc cgttttttgc
     1561 taaaataacc gcaccattct aagtaaagta ccgcaaatgt tcaacatatc ggctgttgcc
     1621 gtttcctatc tgatcggctc actttctttc gccgtcatcg tgtccaaata ttacggcatg
     1681 gacgacccgc gcacctacgg atcgggcaat ccgggggcaa ccaatgtttt acgcagcggc
     1741 aaaaaaaagg cggccgcgct gacgctcttg ggcgatgccg ccaaaggttt agttgccgtt
     1801 ttgcttgcac gcgtgcttca agaaccgctc ggtttatccg acagcgcaat cgcggccgtc
     1861 gcactcgccg cgctggtcgg gcatatgtgg ccggtgtttt tcggatttaa aggcggcaaa
     1921 ggcgtggcaa cggcattggg cgtgcttctg gcactctctc ctgcaactgc cttggtctgc
     1981 gcgttgattt ggcttgtgat ggcattcggc ttcaaagtat cctcccttgc cgcattaacc
     2041 gccacaatcg ccgcccccct tgccgcactg ttttttatgc cgcatacttc ttggattttc
     2101 gcaaccctcg caatcgccat attggtgttg ctccgccata agagcaacat cctcaacctg
     2161 attaaaggca aagaaagcaa aatcggtgaa aaacgctgat tcggcatttg ttttccatta
     2221 cgtcatgccg tctgaaacca tgttcccgcg ttcagacagc atttccgcac aaacggcttt
     2281 cataccatgc tcagttacag acacgcattc cacgccggca accacgccga tatgctcaaa
     2341 cactttacct tgtttttagt gctgcaatat ttcaaccgca aagacaagcc ctactggtac
     2401 atcgacacgc acggcggcgc gggtgtgtac aatctcgaag gcagcgaggc gcagaaagtc
     2461 ggcgaatacc ggcaaggcat cgccctgctc cgacaggcgc aaaacctgcc tgccgaactc
     2521 tctgactttg ccgcgcacat acaaaaaatc ctgccctcgc ccgaacttta ctgcggttct
     2581 ccgtggctgg cacaatcgct gacccgcgtc ggcgacaaat tacgcctgtt tgagctgcac
     2641 cccaccgact ttgtccatct gcaaaacaat atgggcgaag caggattggg caaacgcgga
     2701 caagtgttgc gcgaagacgg ttacaaaggg ctgatttccc tgctgccgcc cccgccgcgc
     2761 cgtgccgccg tcctcatcga cccgccttac gaggaaaaac aggactactg gcgtgtaacg
     2821 gaaacgctga aatccgcttt aaaacggttt gagtccggct gttatctcat ctggtatccc
     2881 tgcctcagcc gcgaagaaag ccgcaagctg cccgaagaac tgaaaaaact cgttcccgac
     2941 aactaccttc acgccgaact gcacgtccac gcgccgaaag ccgacggttt cggtatgcac
     3001 ggcagcggaa tgttcgtcat caatccgccc tatctgttgg cggaacaatt ggcggcaaac
     3061 ctccccgccc tgacgcggct gctggcgcaa gacgaaggcg cgcgctacct tttggacagc
     3121 aaaatccgct gaccccgatg ccgtctgaaa cccttcagac aacatctccc gtcaaataaa
     3181 caaaaccgga cgatataccg gcagtcggca cttttaagaa taaatatccc ctcatccgcc
     3241 tgccgcgttc cgacttgccc catgccgttt ttttacacta caatccccta gactatcctg
     3301 caaaacgcac caaaggaata cgccacaata acctgccgcc tttcagacgg cacaaacctt
     3361 tccgaaacga gcaaactatg gacacactga cccgattcct ccccgaacac ctgcaacaaa
     3421 accagctgcc cgaagcactc ggcggcgttt tactgtccgt tgtttccgcc tgcaccgaaa
     3481 tcaacgccaa agtccgcctc ggcgcactgg ccggcgtatt gggtatggcg ggcacgggca
     3541 atattcaggg cgaagaccaa aaaaaactgg atgttatcgc caacaacatc atgattgaca
     3601 cactcaaagc caaccctgcc gttgccggtt tggcaagcga ggaagaagac tctttcgtaa
     3661 gtgccggtga aaacggacgc tatctcgtcc tattcgaccc tttagacgga tcgtccaata
     3721 ttgatgtcaa catttccgtc ggtacaattt tctccatcct tgaaaaaccc gaaggcgcat
     3781 tggcaaccga atcattcctt caaacgggca gacagcagct tgccgcaggc tatatcctct
     3841 acgggcctca aacccagctc gtattcacat tcggacacgg cgtatatatg ttcacgctca
     3901 atgccgaaaa cgaatttgtg ctgaccaaag aaaaaccgaa agtacccgaa agtaccaaag
     3961 aatttgccat caatatgtcc aaccgccgcc actggctgcc ccccgtccaa caatacatcg
     4021 acgagctctt ggcgggcgaa accggcacgc gcggcaaaaa ctacaatatg cgctgggtag
     4081 ccagcatggt tgccgaaatc caccgcatac tgatgcgcgg gggcgtgttc atgtatccgc
     4141 aagacaaacg cgacccgtcc aaacccggca aactgcgcct gatgtatgaa gccaatccta
     4201 tggccctgat actcgaacaa gccggcgcat cggcaagcaa cgcccgtcag gacatactcg
     4261 gcatccgtcc cgaaagcctg caccagcgcg tcgccgtcat tatgggcagc agcgaagaag
     4321 tggattacct caaccgcctg cattcaaaat aaaaggcagc ctgaccgata aagaaaggcg
     4381 gcagcgcgca tccgacgctg ccgccgatat ttcgtttata gccttaaaaa gatagaaaac
     4441 cacctttccg aacggcaaaa atgccgtctg aaaagttttc agacggcatt ttaaaaatta
     4501 aagcccgaat ttatttgccc gctgcttttt gcaggatggc gtacaactcg tctttcagtt
     4561 tcaatttggc ttttttcagc tcatcgatgg tttccgcacc gctggtaacc ggattgttga
     4621 ccagaccggt aattttatcg tccagctcgt tgtgttcgtc gaacagacgg gcgaagcggg
     4681 aattttcctg tttcaatttg gaaatcaaat cacggtattc tgggaacata tcgctttcct
     4741 ctcttggttt acggttaaaa agtcaaactg aatctttaca ttaattataa caaagataat
     4801 atttttatcc agtgttttat cggatacggc aaaattttct tttaacaccg ccgtccggtt
     4861 gataaaaacg ttgacaatat cacgctttac gcataaattt tcagcctttc ctactgtata
     4921 gtggattaac aaaaatcagg
//
LOCUS       DAWKJW010000140         4919 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.140, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000140 DAWKJW010000000
VERSION     DAWKJW010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4919)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4919)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4919
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.140"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(417..2693)
                     /locus_tag="WJJ54_001601"
     CDS             complement(417..2693)
                     /locus_tag="WJJ54_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ7342447.1"
                     /translation="MAQTTLKPIVLSILLINTPLLAQAHETDRSVDLETVSVVGKSRP
                     RATSGLLHTSTASDKIISGDTLHQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTG
                     RRIKVLNHHGETGDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVAD
                     GKIPEKMPENGVSGELGLRLSSGNLEKLTSGGINIGLGKNFVLHTEGLYRKSGDYAVP
                     RYRNLKRLPDSHADSQTGSIGLSWVGEKGFIGAAYSDRRDQYGLPAHSHEYDDCHADI
                     IWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGFHDDDDAHAHAHNGKPWIDLRNKR
                     YELRAEWKQPFPGFEALRVHLNRNDYRHDEKAGDAVENFFNNQTQNARIELRHQPIGR
                     LKGSWGVQYLQQKSSALSATSEAVKQPMLLDNKVQHYSFFGVEQANWDNFTLEGGVRV
                     EKQKASIRYDKALIDRENYYNHPLPDLGAHRQTARSFALSGNWYFTPQHKLSLTASHQ
                     ERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLALYRNRF
                     GNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGD
                     YVRGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRVPAARLGFHLKASLTDRIDANLDY
                     YRVFPQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYVKADNLLNQSVYAHSSFL
                     SDTPQMGRSFTGGVNVKF"
     gene            3115..3705
                     /locus_tag="WJJ54_001602"
     CDS             3115..3705
                     /locus_tag="WJJ54_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEZ7342448.1"
                     /translation="MLLFIDNYDSFTYNIVQYFAELGQEVAVRRNDDITLEEIEALNP
                     QYLVIGPGPCSPKEAGISVAAMRHFAGRLPIMGVCLGHQTIGEAFGGRIVRAKTLMHG
                     KVSPVSHSGKGMFKGLPNPVTCTRYHSLVIDRNTMPECLEVTAWTEDGEIMGVRHKEY
                     AVEGVQFHPEALLTEHGHDMLNNFLIEFQNFKPQKI"
     gene            3769..4827
                     /gene="trpD"
                     /locus_tag="WJJ54_001603"
     CDS             3769..4827
                     /gene="trpD"
                     /locus_tag="WJJ54_001603"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEZ7342449.1"
                     /translation="MITPQQAIERLISNNELFYDEMTDLMRQMMSGKVPPEQIAAILT
                     GLRIKVETVSEITAAAAVMREFATKVPLENAEGLVDIVGTGGDGAKTFNISTTSMFVA
                     AAAGAKVAKHGGRSVSSSSGAADVVEQMGANLNLTPEQVAQSIRQTGIGFMFAPNHHS
                     AMRHVAPVRRSLGFRSIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHV
                     LVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESL
                     LKMNEVLEGREGAARDIVLLNTAAALYAGNVAASLSDGISAAREAIDSGRAKSKKEEF
                     VGFQPQQRCHFLGKMELG"
BASE COUNT         1130 a         1117 c         1419 g         1253 t
ORIGIN      
        1 aacccaaatg ctaaggcgat ttatcggaaa cggctgaaac cgaacgaatt ggattcccgc
       61 ctgcgcggga atgatggcac attagttacc taaaacttaa aaaaaacaga aacctttccg
      121 cgtcattccc acgaaagtgg gaatctagaa cccaaatgct aaggcgattt atcggaaacg
      181 gctgaaaccg aatgaattgg attctcgcct gcgcgggaat gatgggtttc tgcttttgat
      241 ttttctgctt ttgcgagaat gacggcgtga aagcaagaat gatgaaacaa agaaaatggg
      301 aatgatggca tagtggtttg ttctttgtct ttgccatatt tcctaacaaa ttgattaaaa
      361 agaaaaaagg ttttcagaat gccgtctgaa aacctttttt gtttgcctgt ccgattttaa
      421 aacttcacgt ttacgccgcc ggtaaagctg cgacccattt gcggcgtatc agagaggaag
      481 ctgctgtggg cgtaaacgga ttggttgagc aggttgtcgg ctttgacgta ccaattccac
      541 tcgccatagc gcgtattgcg gcggtagttt gcgccgaggt tgagcatatg gtgtccgggc
      601 gtgcgcgttt cgtagcgggc gagtttgttt tggggaaaca cgcggtagta gtccaaattg
      661 gcatcgatgc ggtcggtcag cgaggctttc aggtggaagc cgaggcgcgc agccggaacg
      721 cgaggggcgt tttggtcgtc ctgcgcgatg aaaggacggt tgccgtaggc atcttccctg
      781 ccgggtaggg acggcaggtt tttcagacgg cctcgtacat agtcgccgga aacgccgatg
      841 cggtagcgcg gtgtcggttt gaagtagatt tcgccttccg cgccgtagaa gtccgcaccg
      901 gattggttgt agcgcacgag cttcatttcg ctgtcgtctt cgatggattt ggggccgcgt
      961 ccgtcgttta aggtttgggc gtaaatgtag ttgccgaagc ggttgcggta gagtgccaga
     1021 ttgtattgcc agcggtcgcc ttcgtagccc agcgcgagtt cgatattgtt ggaacgctct
     1081 ttgttgaggt gtttgttgcc gacttcaaag gtgttggtgg cgacgtgttt gccgtgtgcg
     1141 tacagctctt gcgttgacgg caggcgttcc tgatgggagg cggtcaggct gagtttgtgt
     1201 tgtggcgtga aataccagtt gcccgaaagt gcgaatgagc gggcggtttg gcggtgcgcg
     1261 ccgaggtcgg gcaggggatg gttgtagtag ttttcccgat caatcaatgc tttgtcgtag
     1321 cggatggagg ctttttgttt ttccacgcgt acgccgcctt caagcgtgaa gttgtcccag
     1381 tttgcctgtt ctacaccgaa aaagctgtaa tgttgcactt tattgtcaag cagcatcggt
     1441 tgtttgaccg cttcggatgt ggcagataaa gcactggatt tttgttgtaa atattgcacg
     1501 ccccagctgc ctttcagacg gcctatgggt tggtggcgca actcgatacg ggcgttttgc
     1561 gtttggttgt taaaaaagtt ttctactgca tcgcctgctt tttcgtcgtg gcggtagtcg
     1621 ttgcggttca ggtgtacgcg cagggcttca aaaccgggga acggttgctt ccattcggcg
     1681 cggagttcgt agcgtttgtt gcgcaggtct atccaaggtt tgccgttgtg ggcatgggcg
     1741 tgtgcatcat cgtcgtcgtg aaagccgcag ctcaagcccg gattgtcgta atcgatgtct
     1801 tcttcggtca acaggtgcgg ataaagctgc aaatagcgtt tgttaatcaa actcttttgc
     1861 cagatgatgt cggcgtggca atcatcgtat tcgtggctgt gggcaggcag accatattgg
     1921 tcgcgacggt cgctgtatgc tgcgccgata aagccttttt cgccaaccca agacagcccg
     1981 atgctgcccg tttgcgaatc ggcgtggctg tcgggcaggc gtttcagatt gcggtaacgc
     2041 ggtacggcgt aatcgcccga tttgcggtac aagccttccg tgtgcaatac aaagtttttg
     2101 cccaaaccga tattgatgcc gccggacgtg agtttttcca gattgccgct gctcaaacgc
     2161 aatccgagtt cgcccgatac gccgttttca ggcatttttt cggggatttt gccgtcggca
     2221 acatcgacca aaccggctac attgcctgag ctgtacaaga gcgtaaccgg accgcgcagg
     2281 atttcaacct gttgcgacaa ggcggtatct accataatgg cgtgatcggg cgaaaaatcc
     2341 gccatatcgc ctgtttcgcc gtgatggttc aaaaccttaa tccgcctgcc tgtttgaccg
     2401 cgaataacgg gagcggacgc gccgccgccg tattgcgaag cgtggatgcc aggtacgccg
     2461 tctaaagcat cgcccaagtt gacagctttt tggtgcaagg tatcgccgga gatgattttg
     2521 tcggaggcgg tagaagtgtg cagcagcccc gaagtcgcgc gcggacggct tttgccgacg
     2581 acgctgaccg tttccaaatc caccgaccga tcggtttcat gcgcttgggc gaggaggggt
     2641 gtgttgatta aaagaattga taaaacaata ggtttgagtg tggtttgtgc cattttggct
     2701 tcccgtcgta tttcaaaagt ttgttattat ataacattac attttttata tcataagatt
     2761 ttgagaacac tcagagggca taggcaaaag tttttcaaat gaaacggttg cggcatcggg
     2821 cggtgtccat ttgtatccgc cgtcattcgg gggcgcggtt gatgttgacg cagattccgc
     2881 tatgtttgcc cactatgttc ggttgcggga taaccaaaat ttatgagtgc ataaaaacgg
     2941 tacgttcccg aacggtcgaa aaggtggcaa aatggcgtac ttgtcagaac gcgaggctct
     3001 gcgctaggtt cacgagggcg catcgggcac gctaagatat aagagggtat ggatgggggt
     3061 atcggaaatg cagttaataa caaacaaatt ataaatcaat aggttaatca caaaatgctt
     3121 ttgtttatcg acaattacga cagttttact tacaacatcg tccagtattt cgctgaattg
     3181 gggcaggaag tcgccgtgcg ccgcaacgat gatattacgt tggaagaaat cgaggcattg
     3241 aatccgcaat atctcgttat cggacccggt ccgtgttcgc ccaaagaagc ggggatttcc
     3301 gtggcggcga tgcgccattt tgccggccgg ctgccgatta tgggcgtgtg cctcgggcat
     3361 cagacgatag gcgaggcgtt cggcggcagg atagtccgcg ccaaaacgct gatgcacggt
     3421 aaggtgtcgc ccgtgtccca ttcgggcaag ggtatgttta aaggtttgcc caatccggtt
     3481 acctgtacgc gttatcacag cctcgttatc gatcggaata cgatgcccga atgtttggaa
     3541 gtaacggctt ggactgagga cggcgagatt atgggtgtgc gccataagga atatgctgtt
     3601 gagggggtac aattccaccc tgaagctctg ctgaccgaac acggacatga tatgttgaac
     3661 aattttttaa tcgaatttca aaacttcaaa ccgcaaaaaa tctgacgcga tgccgtctga
     3721 agcccttcag acggcatttt cgtccgaata ttgaacggag gacaaaaaat gattacaccg
     3781 caacaggcta ttgaacgatt aatcagcaat aatgagttgt tttacgatga aatgaccgac
     3841 ttgatgcgcc aaatgatgag cggaaaagtg ccgcccgaac aaattgcggc gattttgaca
     3901 ggattgcgta tcaaggttga aaccgtttcc gaaattaccg cagctgcagc cgtcatgcgc
     3961 gagtttgcga caaaagtgcc gctggagaat gcagaggggc tggtcgatat cgtcggtacg
     4021 ggcggggatg gcgcgaaaac cttcaatatt tcgacgactt cgatgtttgt tgccgcagcg
     4081 gcaggcgcga aggttgccaa acacggaggc cggtcggtct cttcctccag cggtgcggct
     4141 gacgtggtgg agcagatggg cgcaaacctc aacctgactc ccgaacaggt tgcccaaagt
     4201 atcaggcaga ccggcatcgg gtttatgttc gcgcccaatc accacagtgc catgcgccat
     4261 gtcgcccctg tacgccgttc gctcggtttc cgaagtattt tcaacatatt gggtccgtta
     4321 acgaatcctg cgggcgcgcc gaaccagctt ttgggcgtgt tccacaccga tttgtgtggc
     4381 attttgtcgc gggtcttgca acaacttggt tcaaaacacg ttttggttgt ttgcggggag
     4441 ggcggtttgg atgaaattac actgacgggc aaaacacgcg ttgccgagct caaagacgga
     4501 aaaatcagcg aatacgacat ccgcccagaa gatttcggta tcgaaacccg ccgcaatttg
     4561 gatgaaatca aagttgccaa tactcaggaa tctttgttga aaatgaatga ggtgctggaa
     4621 ggaagagaag gggctgcgcg cgatatcgta ttgctcaaca ccgccgccgc cctgtatgcc
     4681 ggaaatgtcg ctgcttcgct ttcagacggc atatctgccg cacgggaagc catcgattca
     4741 ggcagggcca aatcgaaaaa agaggagttt gtcggttttc aaccacaaca aagatgccat
     4801 tttcttggaa agatggagct tgggtgatgc cgccatgatt atggaacttt tgtggcaaaa
     4861 cataagcact tcacgaagag aacttaccaa actgttttta tataaaaact tggggctgt
//
LOCUS       DAWKJW010000141         4818 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.141, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000141 DAWKJW010000000
VERSION     DAWKJW010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4818
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.141"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            97..903
                     /locus_tag="WJJ54_001604"
     CDS             97..903
                     /locus_tag="WJJ54_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HEZ7342450.1"
                     /translation="MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGE
                     FPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQ
                     PTFWSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEI
                     VPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDST
                     DDKGEVDIIPLRQGFWKANVEHKADFPDQSVCQKQANYSTLTFQIGHSHH"
     gene            complement(961..2226)
                     /locus_tag="WJJ54_001605"
     CDS             complement(961..2226)
                     /locus_tag="WJJ54_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003420866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HEZ7342451.1"
                     /translation="MSEALAKETLNPFEIARKQVKTACDRLKTDPAVYEILKSPTRVL
                     EVNFPVKLDDGTVKTFTGYRSQHNNAVGPYKGGVRFHPGVNLDEVKALSIWMTIKCCV
                     AGIPYGGGKGGVTLDPRDYSEAELERIARAYSEAISPLIGEKIDIPAPDVNTNGKIMS
                     WMVDAYENVVKHSAPGVFTGKPVEFGGSLARTEATGYGVNLAAVQALEKLGKDVKGAT
                     YAIQGFGNVGYHTGYYAHQSGAKVVAVSTVDVAIYNENGLDMEALFKEFQEKGFITNE
                     AGYGKEITNAELLALDVDVLAPCALENQLTSENAGKVRAKIVVEGANGPTTPEADVIL
                     RQNGVLVVPDILANCGGVVVSYFEWVQNLQGYYWEFDEVQEKETVVLRRAFRDIWNLA
                     QEYDVDLRTASYMMSIRRVEKAMKLRGWY"
     gene            2633..3343
                     /locus_tag="WJJ54_001606"
     CDS             2633..3343
                     /locus_tag="WJJ54_001606"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HEZ7342452.1"
                     /translation="MNAAIEHVQAVAFDLDGTLCDSVPDLAAAAEAMLEQLGMKPLPA
                     KVVESYVGDGIGKLVHRVLTNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPETE
                     AGLALLKSLGIPLAVITNKNEILAVELLKQLGLADYFSLILGGDSLPEKKPSPLPLRH
                     AAEVLGIDVANMVMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDATRPDWIIG
                     SLPEIYENLQPQKNKDEE"
     gene            3416..3877
                     /gene="recX"
                     /locus_tag="WJJ54_001607"
     CDS             3416..3877
                     /gene="recX"
                     /locus_tag="WJJ54_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HEZ7342453.1"
                     /translation="MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLN
                     EFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQQGIDEETSRNLLPDRSSEKLAA
                     IAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC"
     gene            3951..4112
                     /locus_tag="WJJ54_001608"
     CDS             3951..4112
                     /locus_tag="WJJ54_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342454.1"
                     /translation="MSGQPEKNHNPLLEDERKNPVYRMGQAVAGFMLIVWAGVLALVF
                     FLVFRFWLS"
     gene            4265..4747
                     /locus_tag="WJJ54_001609"
     CDS             4265..4747
                     /locus_tag="WJJ54_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEZ7342455.1"
                     /translation="MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYS
                     CASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTG
                     EIRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC
                     "
BASE COUNT         1264 a         1423 c         1098 g         1033 t
ORIGIN      
        1 aaagacagtt ttcagacagc aaatccgtct tcacacgata cctattttgt tataacataa
       61 caaaatcttt aacccacacg agacaaaggc tgcaccatga agaaaacatt gacactgctc
      121 gccgtttccg ccctatttgc cacatccgcc cacgcccacc gcgtctgggt cgaaaccgcc
      181 cacacgcacg gcggcgaata ccttaaagcc gacttgggct acggcgaatt tcccgaactc
      241 gaacccatcg ccaaagaccg cctgcacatc ttcagcaaac cgatgcagct ggttaccgaa
      301 aaaggcaagg aaaacatgat tcaacgcggc acatacaact accagtaccg aagcaaccgt
      361 cccgttaagg acggcagtta cctcgtcatc gccgaatatc agcctacttt ctggtcaaaa
      421 aacaaagcag gctggaaaca ggcgggcatc aaagaaatgc ctgacgcaag ctattgcgaa
      481 caaacccgaa tgttcggcaa aaacatcgtc aacgtcggac acgaaagcgc ggacaccgcc
      541 atcatcacca aaccggtcgg acaaaacttg gaaatcgtcc cgctggacaa tcccgccaac
      601 attcacgtag gcgaacgctt caaagtccgc gttctgttcc gtggcgaacc gctgcccaat
      661 gccaccgtta ccgccacctt tgacggcttc gacaccagcg accgcagcaa aacgcacaaa
      721 accgaagcac aggctttctc cgacagcaca gacgacaaag gcgaagtgga catcatcccc
      781 ttgcgccaag gcttctggaa agccaatgtc gaacacaaag ccgacttccc cgatcaaagc
      841 gtgtgccaaa aacaggcgaa ctactcgact ttaaccttcc aaatcggcca ttcgcaccat
      901 taatcccgcc cgcacaaaaa tgccgtctga aggcttcaga cggcattttt tgttcaaaca
      961 tcaataccaa ccgcgcagct tcatcgcttt ttcaacacgg cggatactca tcatgtaaga
     1021 cgcggttcgc aaatcgacat catactcttg cgccaagttc catatatcgc ggaacgcacg
     1081 gcgcaggacg acggtttctt tttcctgaac ttcgtcaaac tcccaataat agccttgcag
     1141 attttgtacc cattcaaaat aagataccac cacgccgccg cagttcgcca aaatatcggg
     1201 cacgaccaat acgccgtttt gacgcaaaat aacgtcggct tcgggcgtag tcgggccgtt
     1261 tgcgccttca accacgattt tcgcgcggac tttaccggcg ttttcggaag tcagttgatt
     1321 ttccagcgcg caaggggcga gtacgtccac atccaaagcc aaaagttcgg cgttggtaat
     1381 ttccttgccg taaccggctt cgttggtgat gaagcctttt tcttggaact ctttaaacaa
     1441 agcttccata tccaagccgt tttcgttgta aatggcaacg tcaacagtag aaaccgcaac
     1501 aactttcgcg ccggattgat gcgcgtaata acctgtgtgg taaccgacat taccgaaacc
     1561 ttgaatggcg taagtggcac ccttcacgtc cttgcccagt ttttccaagg cttggacggc
     1621 ggcgaggttc acgccgtaac ccgtggcttc ggtacgcgcc aaagagccgc cgaactcgac
     1681 cggtttgccg gtaaatacgc ccggtgcgga atgtttcacc acgttttcat aagcatccac
     1741 catccacgac ataattttgc cgttggtgtt cacatcgggg gcgggaatat cgattttttc
     1801 gccgatcagc ggagaaatgg cttcggaata agcgcgggcg atgcgttcca gttccgcctc
     1861 ggaataatcg cgcggatcca aggtaacgcc gcctttgccg ccgccgtaag gaatgccggc
     1921 cacgcagcat ttgatggtca tccaaatcga cagggctttg acttcgtcca gattcacacc
     1981 gggatggaag cgcacgccgc ctttataggg gccgacggcg ttgttgtgtt gcgaacggta
     2041 gcccgtgaag gttttgaccg tgccgtcgtc gagtttgacg gggaaattga cttccaacac
     2101 gcgggtcgga ctcttcagga tttcataaac ggccggatcg gttttcagcc ggtcgcaggc
     2161 ggttttgacc tgtttgcgcg cgatttcaaa cggattgagg gtttcttttg caagggcttc
     2221 agacattttg cttccttttc acaaaaagat tttcaggggc gtgcatttcg ctcattacta
     2281 taaccaattt cccgacaaaa tgtaatagcg tgtagtcggc ataagcccga tttgattaat
     2341 ctatatatga ttttattttt caagccgcac ggaatcagcc cggactccgc ctgaaaaagc
     2401 agcgcgcgcg tccgaaaaat aaatgtcaaa ttaaataaag atataggcat ccttttattt
     2461 tttaaaaatt taattggaac atcgccggga tttcaaaccc ttgcccgatt ccgccccgaa
     2521 atccgaaaac accgcctgca aaacctgttg cgattgttaa caatctatac attagaagcc
     2581 ctgtgcaaac gatgttaaaa taaacccttt caacccgaca ggaaatcaga ttatgaatgc
     2641 agccatcgaa cacgtccaag ccgtcgcctt cgatttggac ggcacactgt gcgattccgt
     2701 ccccgacctt gccgccgccg cagaagcgat gttggagcaa ctcggtatga aaccgctgcc
     2761 cgccaaagtg gtcgaaagct atgtgggcga cggcatcggc aaactggttc accgcgtcct
     2821 caccaacgac cgcgaccgcg aagccgattc cgaactgtgg gaaaaaggtt tcgtgtccta
     2881 tatgaaatac taccgcgacc atttgagcgt cttcacccgc ccctatcccg aaaccgaagc
     2941 cgggctggca ttgctcaaat ctttgggcat cccgctggca gtcattacca acaaaaacga
     3001 aatccttgcc gtcgaactgt tgaaacagct cggacttgcc gactacttca gcctgatact
     3061 cggcggcgac agcctgcccg agaaaaaacc cagccccctg ccgctgcggc atgccgccga
     3121 agttttgggt atcgatgttg caaacatggt tatggtcggc gactcgcgca acgacatcat
     3181 cgccgccaaa gccgccggct gcctgagcgt cggcgttacc ttcggttacg gcgatatgac
     3241 gctgctctcg caagacgatg cgacccgccc cgactggatt atcggctcgc tgcccgaaat
     3301 ttacgaaaac ctgcaaccgc agaaaaataa agacgaagaa taaaacaatc tgttcagacg
     3361 gcatcggaat ccgtttccca tgccgtctga atctttccgt gccgaaaccg ccgccatgaa
     3421 accgcaaaaa tccctacgcg cccgcgcgat ggacatcctc tcgcgccaag aagtcagccg
     3481 catcggtctg aaacgcaaac ttgcaccgca cgccgaaagc gaagaggagt tggaaaacgt
     3541 gttaaacgaa tttgccgaac gcaactggca gtcggatttg cgctatgccg aagcctatat
     3601 ccgcagcaaa agccgcaaac acggttcatt gaggctgaaa caggctttgg cgcaacaggg
     3661 catagatgaa gaaaccagcc gcaacctgct tcccgaccgc tcaagcgaaa aactggccgc
     3721 catagccgtg ttgcgtaaaa aattcaaaca ccccgccgcc gacctcaaag aaaaacaaaa
     3781 acaggcgcgt ttcctcgcct atcgcggatt cgatgccgat accgttcaga cggcattgaa
     3841 acacgcttgg gacgaaaatt gggaagacgg ctgctgacct tccttcttga atctttttgc
     3901 acggcaacat aaccttacgc ccgtttccaa cttttccgat tgagaacaaa atgtccggac
     3961 aacccgaaaa aaatcataac cccctccttg aggacgaacg caagaacccc gtgtaccgca
     4021 tggggcaggc agttgccgga ttcatgctca tcgtttgggc aggcgtgttg gcactcgtgt
     4081 ttttcctagt cttccgtttt tggctttcct aaacaaaatg ccgtctgaag gcttcagacg
     4141 gcatcggcgg tccatttcgg cagactatcc catcatagct ttttttagct tgaattccac
     4201 ttccccattc cctaaaattt tcccacaccc atttcaaaac accctttctt aaaacaggta
     4261 cactatgaca caacaacgcc aactgccttc ccacgaactc attatgtccg aactgatgat
     4321 gccggacacc gccaatttca gcggcaacgt acacggcggc gaactcctgc tcctgctcga
     4381 ccaagtcgcc tattcctgcg ccagccgtta cagcggcaat tattgcgtta ccctgtcggt
     4441 tgacaaagtc ctgtttaaag aacccatcca catcggcgat ttggttacct tttacgccgc
     4501 tgtcaactac acgggacgca cctcgatgga aatcggcatc cgtgtcgaag cacaaaacat
     4561 ccgcaccggc gaaatccgcc acaccaacag ctgctacttc acgatggttg cggtcaaaga
     4621 cggcaaaccc gtccctgtcc ctccgctgga aatcctgacc gaccgccaac gctgccgcta
     4681 cgaaaaagcc aaaaaacgca gagacatcag cctgcaagcc tctgaagaca tgtcctgcgg
     4741 ctgctgacgg cggactatgc cgtctgaaag acaggcacat cgcgccatcc gtttccattg
     4801 caaacggatg aaatcaag
//
LOCUS       DAWKJW010000142         4794 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.142, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000142 DAWKJW010000000
VERSION     DAWKJW010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4794
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.142"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(187..381)
                     /locus_tag="WJJ54_001610"
     CDS             complement(187..381)
                     /locus_tag="WJJ54_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HEZ7342456.1"
                     /translation="MKHKLASWWKTIKLTANLMAGVPDYENYVAQQRKHNPNAPVMTK
                     LQFQDYCRKRRCGANGGRCC"
     gene            complement(371..2452)
                     /locus_tag="WJJ54_001611"
     CDS             complement(371..2452)
                     /locus_tag="WJJ54_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HEZ7342457.1"
                     /translation="MKSLKTFLIWGIVVLVGLASFTTLALSRGEQVSAVWMVTAAISV
                     YCIAYRFYSLYIANHVMRLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGTLWIIFGVVFAGAVQDMMVLFVSMRRDGKSLGDIVKQELGTVPG
                     VIASIGILMIMVIIMAVLALIVVKALVHSPWGTFTIAATMPIALFMGIYTRYIRPGKI
                     GEISIVGFILLMLAVIYGEDVAKSSIGHWFDLDGIQLTWAIMIYGFVASVLPVWLLLT
                     PRDYLSTFLKIGTIAALALGIVIVNPALQMPAVTHFIDGSGPVFSGALFPFLFITIAC
                     GAVSGFHALISSGTTPKMLENETHVRMIGYGGMLMESFVAIMALAAAASLDPGVYFAM
                     NSPAALIGTDANTAAEVITTKLQFPVDAATLLHTAKEVGENTILSRAGGAPTLAVGMA
                     HIMSRLIPGEAMMAFWYHFALLFEALFILTAVDAGTRVARFMIQDLGSIFYKPFGNTD
                     SIPANLIATFFAVALWGYFLYTGVTDPLGGINSLWPLFGIANQMLAGVALIMCAVVLI
                     KMKRDRYVWVVLVPAVGVLFVTCYAGLQKLFHSDPRISFLAHAGKYSDALAKNEVLAP
                     AKDIGEMAQIIFNDKINAGLTILFLSVVVIVAAYGLRTALKARKVGWPTAKEIPAVYR
                     DGKQPEAQSEA"
     gene            2928..3308
                     /locus_tag="WJJ54_001612"
     CDS             2928..3308
                     /locus_tag="WJJ54_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HEZ7342458.1"
                     /translation="MNIRFFALTVPVLSLAACAVPEAYDDGGRGHMPPVQNQAGTADF
                     RAFSCENGLSVHVRRLDGGRIALRLDGRRAVLSSDVAASGERYTAEHGLFGNATEWHQ
                     KGGEAFFGFTDAYGNSVETSCRAR"
     gene            complement(3591..4124)
                     /locus_tag="WJJ54_001613"
     CDS             complement(3591..4124)
                     /locus_tag="WJJ54_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342459.1"
                     /translation="MEKIEKFKSELLDDIFQYIQCISIFVYKKKIYYLIDYKENFELN
                     AKISFDIYLREGIITKEQYNYDYKNYRNGIWQLTKDNFESYLQSDSVIVLKKDELKEL
                     MFQGFTSAEAVRLYSVVENKLSYNDPILHMDWDRCHEDYVYDGWFAKAMDFGYLIPDE
                     FCYWKIEGRDYWKFGQL"
     gene            complement(4278..4771)
                     /locus_tag="WJJ54_001614"
                     /pseudo
     CDS             complement(4278..4771)
                     /locus_tag="WJJ54_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713843.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CdiI family contact-dependent growth inhibition
                     immunity protein"
BASE COUNT         1183 a         1177 c         1229 g         1205 t
ORIGIN      
        1 gtacgtcgtt gcctcgcctt agctcaaaga gaacgattct ctaaggtgct gaagcaccaa
       61 gtgagtcggt ttcgtactat ttgtactgtc tgcggcttcg tcgccttgtc ctgatttttg
      121 ttaatccact atattataaa aattccgtct gaagcggcgt tcagacggaa tttgtttcaa
      181 gcaggcttaa cagcagcgtc cgccgtttgc gccgcaacgg cgcttgcggc agtagtcttg
      241 aaattgcagc ttggtcatca cgggggcgtt gggattatgt ttgcgctgct gtgcaacgta
      301 gttttcataa tcaggcacgc ctgccatcaa gtttgccgtc agcttgatgg ttttccacca
      361 agacgcgagc ttatgcttca ctttgtgcct ccggctgctt gccgtcgcgg tacaccgccg
      421 ggatttcttt ggcggtcggc cagccgactt tgcgtgcttt gagggcggta cgcaaaccgt
      481 acgcggcgac aatcacgaca accgacaaga agaggatggt cagaccggca ttaatcttgt
      541 cgttgaagat gatttgcgcc atttcgccga tgtctttggc aggcgcaagg acttcgtttt
      601 tagccaatgc gtcgctgtat ttgccggcgt gggcaaggaa gctgatgcgc gggtcgctgt
      661 ggaacagttt ttgcaggccg gcgtagcagg ttacgaacag tacgccgacg gcgggaacga
      721 gtaccaccca aacataacgg tcgcgtttca tcttaatcag caccacggcg cacataatca
      781 aggccacgcc tgccagcatt tggttggcga tgccgaacaa aggccagagc gagttgatgc
      841 cgcccagcgg gtcggttacg ccggtgtaga gaaagtagcc ccacaatgcc acggcgaaga
      901 aggtcgcaat caggttggcg gggatggagt cggtgttgcc gaaaggtttg tagaagatgc
      961 tgcccaagtc ttgaatcata aaacgtgcga cgcgcgtacc ggcatcgacg gcggtcagga
     1021 tgaacaaggc ttcaaacaat agggcgaagt gataccagaa cgccatcatc gcctcgcccg
     1081 gaatcaggcg gctcataatg tgcgccatac cgactgcgag ggtgggcgca ccgcctgcac
     1141 gggaaaggat ggtgttttcg cccacttcct tagcggtgtg caacagggtt gcagcatcga
     1201 cagggaattg cagcttggtg gtaatcactt cggcggcggt attggcatcc gtaccgatca
     1261 gggcggcagg gctgttcatg gcgaagtaca cgccgggatc aagcgatgcg gcggcggcaa
     1321 gcgccataat ggctacgaaa ctttccatca acataccgcc gtaaccaatc atacggacgt
     1381 gggtttcgtt ttccagcatt ttcggcgtgg tgccggagga aatcagcgcg tggaagcccg
     1441 aaaccgcacc gcaggcgatg gtgatgaaga ggaacgggaa caatgcgcct gagaataccg
     1501 gacccgaacc gtcgataaag tgggttacgg caggcatttg caaagcggga ttgacgatga
     1561 cgatgcccaa agccaaggcc gcaatcgtac cgattttcag gaaggtggag agatagtcgc
     1621 gcggagtgag cagcaaccat acgggcaata cggaggcgac aaagccgtaa atcataatcg
     1681 cccaagtgag ctggatgccg tcaaggtcga accaatgtcc gatggaactt ttcgccacat
     1741 cttcgccgta aattaccgcc agcatcagca aaataaagcc gacgatggaa atctcgccga
     1801 ttttgcccgg acggatatag cgcgtgtaaa tacccataaa cagggcaatc ggcatagtgg
     1861 cggcgatggt aaacgtaccc caagggctgt gaaccagtgc ttttacgaca atcaacgcca
     1921 acaccgccat aatgatgacc ataatcatca aaataccgat ggaggcaatc acgcctggaa
     1981 cagtaccgag ttcttgtttc acaatatcgc ccaaagactt accgtcgcga cgcatagaga
     2041 cgaacaagac catcatatcc tgtaccgcgc cggcaaacac cacgccgaag ataatccaca
     2101 aagtaccggg caggtaaccc atttgcgccg ccaaaaccgg gccgaccaaa gggcccgcgc
     2161 ccgcaatcgc ggcaaagtgg tgtccgaaca atacgccttt gtgcgtcgga acgtagtcca
     2221 agccgtcgtt gtggcgttct gccggagtca ggcggttagg atcgagccgc attacgtggt
     2281 tggcgatgta gaggctgtaa aaacggtagg cgatgcagta aacggatatg gcggcggtaa
     2341 ccatccatac cgcgctgacc tgttcgcctc ggctgagagc cagagtggta aaggatgcta
     2401 agccgaccag taccactatg ccccaaatga ggaaggtttt gagtgatttc atcgaataaa
     2461 tccttatctc acactgtcgg aatatgcctg aacggcggga aacggatgac cgcctgccgg
     2521 cacgggcaca aaccggagtc tgaatgattg acgaagtatg aaacagtgcg cttgtcggga
     2581 tttgtgcctt atgcccgcat caaacagtgc agggatgcgg gcgcacaaaa cgttaaacgc
     2641 cgaataggat tttaacgcaa attagcacac tgatagcggt ttttacttgg aatttggaaa
     2701 aaatttacat tccttcgggc ggacaggcgg gtttggacgg catcgtcagg caaaaggcgg
     2761 cgccggaaga cgggtaaaga aggggcgcgc aatccggatt attgattcat cgcgggtaaa
     2821 ttccggttat cgggcttgtg tgtttgcgcg tccgtttata gtatggcgtt gccgcagctt
     2881 ggaatcaggg cggttgtttc atatcttatt tttattgggg agcttttatg aatatcaggt
     2941 ttttcgcgct gaccgtaccg gttttgtctt tggcggcctg tgccgtgccg gaggcgtatg
     3001 atgacggcgg acgagggcat atgccgcccg ttcaaaacca agccggcacg gcagattttc
     3061 gggcattttc ctgcgagaac ggtttgtctg tgcacgtccg ccgtttggac ggcggcagaa
     3121 tcgcgttgcg gttggacggc aggcgtgccg tcctctcttc cgacgttgcc gcatccggag
     3181 aacgctatac cgccgaacac ggtttgttcg gaaacgcaac cgagtggcac cagaaaggcg
     3241 gcgaagcctt tttcggcttt accgatgcct acggcaattc ggtcgaaact tcctgccgcg
     3301 cccgttaaac ggggcagcct gtttgaaccg ccgtccggat ttttcgggcg gttttttatg
     3361 tcggatttgt tttgcagttc ggcctccggc agggttttgg ctgtctgata ccgtccgtaa
     3421 cttcgggtat tgccgagttt gtcggcaacg accgctgcga cttgggcggc gttttgccga
     3481 acgcctgcgt tacttccctt tgtaggccga tctctttggc aaccgcgtct ttgtcgaagc
     3541 tgtttttcag acagcctttt aaattcatac aatctatggc ttgcttatct ttataattgt
     3601 ccaaatttcc aataatcccg cccttcaatt ttccaataac aaaattcgtc cggtattaaa
     3661 tacccaaaat ccatcgcctt tgcaaaccag ccgtcataaa cataatcttc atgacatctg
     3721 tcccaatcca tatgtaagat aggatcattg tacgacagct tgttctcgac aacggaatat
     3781 aaccttaccg cttcagcaga agtaaatccc tgaaacatca gttccttcaa ttcatccttt
     3841 tttaatacaa tgactgaatc cgattgaaga tagctttcaa aattgtcctt agttaactgc
     3901 cagataccat tacggtaatt tttataatca taattatatt gttcttttgt tataattcct
     3961 tctcttagat aaatatcaaa agatattttt gcatttaatt caaaattttc cttataatca
     4021 atcaagtaat atatcttttt cttatagaca aaaatagata tgcattgaat atactgaaag
     4081 atgtcatcca ataattcaga tttaaatttc tcaatctttt ccatatttgc caaattcctt
     4141 aataacttta tcttcagcaa gccgtaaccc acattaaatc tgcaggtaag gtgtggtacg
     4201 cacgccagtg aacttgagtc taataaaaag gtcgtctgaa acatttttcc ggctttcaga
     4261 cggccttttg ccaaatatta tcggcagcgg ctcaatgcca actttaaacc tgctccgatt
     4321 tcttcagggc tgttatccaa tgataaaatt acatcgtctg catcaatggc atcccacgct
     4381 tccagcttga catggcggct cgggctgatt ttcaggcagc cgttgtgcag ccaaatatcc
     4441 acgctcatca tgtttttaaa tagggcgcgt ctggttttat agcccaagtt cctgcatagg
     4501 ttggcaaccc aatcctcata gcgttgccga aatttttcgg tatcaaaaaa atcttggtct
     4561 tctggactgt cataaacgaa agtcctgctg tttgccaacg cttgcaagac cgtcgtgcct
     4621 aaagtttcat tgtcggtatc caatggcagg atatgggggg atataggtgg tctattgccg
     4681 ttaatcccaa acctgaacat gtttgaacaa tcagagcttc ttcattcgta taaaaaactg
     4741 cccaataatt ttgagcctgt ttaaaaatca ttattttatc tccgtaattt tgat
//
LOCUS       DAWKJW010000143         4727 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.143, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000143 DAWKJW010000000
VERSION     DAWKJW010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4727
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.143"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            165..944
                     /gene="pgeF"
                     /locus_tag="WJJ54_001615"
     CDS             165..944
                     /gene="pgeF"
                     /locus_tag="WJJ54_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HEZ7342460.1"
                     /translation="MKTITETLNLAPKGKNFLTADWPAPANVKTLITTRNGGVSQGAY
                     QSLNLGTHVGDDPEAVRRNREIVQQQVGLPVAYLNQIHSTVVVNAAEALGGTPNADAS
                     VDDTGKVACAVMTADCLPVLFCDRAGTAVAAAHAGWRGLAGGVLQNTIAAMKVPPVEM
                     MAYLGPAISADAFEVGQDVFDAFCMPMPEAAAAFEGIGGGKFLADLYALARLILKREG
                     VGGVYGGTHCTVLERDTFFSYRRDGATGRMASLIWLDGNAV"
     gene            996..1475
                     /locus_tag="WJJ54_001616"
     CDS             996..1475
                     /locus_tag="WJJ54_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342461.1"
                     /translation="MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALQ
                     FPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVL
                     KRGEPVGKPMTVSVRRVLAYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE"
     gene            1477..2475
                     /locus_tag="WJJ54_001617"
     CDS             1477..2475
                     /locus_tag="WJJ54_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEZ7342462.1"
                     /translation="MAAHIGRIDTDAPLKPLYVIHGEEELLRIEALDALRAAAKKQGY
                     LNREVYTADNAFDWNELLQTAGSAGLFADLKLLELHIPNGKPGKTGGEALQDFAARLP
                     EDTVTLVLLPKLEKTQLQSKWFAALAAKGEVWEAKPVGAAALPQWIRGRLDKIGLGIG
                     ADALALFAERVEGNLLAARQEIDKLALLYPKGHTVNIHEAQTAVANVARFDVFQLAGA
                     WMKGDVPRVCRLLDGLQEEGEEPVLLLWAVAEDVRTLIRLAAALKQGQSIQSVRNSLR
                     LWGEKQTLAPLAVKRISVVRLLDALKTCAKIDRIIKGAEEGDSWAAFRQLVISLAE"
     gene            2596..3015
                     /locus_tag="WJJ54_001618"
     CDS             2596..3015
                     /locus_tag="WJJ54_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342463.1"
                     /translation="MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAA
                     AAGGFVWTSRRQQRQFIERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLS
                     QKCSVDEAHAMFKKRPTRQEINQMAAKQSRGQKRPHR"
     gene            3091..3606
                     /locus_tag="WJJ54_001619"
     CDS             3091..3606
                     /locus_tag="WJJ54_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEZ7342464.1"
                     /translation="MMTLKTAPLKRRFAAMLYEMLLVGAATCLAALFAGIAAIFLNPV
                     SIAVSALVTSILIMGSWWLYFRANWHGQGQTLAMRTWKIGLCDLNGIQPSLYLLRLRF
                     IWACIFIVFIPMLAYAGLRHFLGIPPKGAAGAALIWLILPWGFALLNPDRQFLYDFLA
                     GTRLVAVKGKP"
     gene            complement(3690..4574)
                     /locus_tag="WJJ54_001620"
     CDS             complement(3690..4574)
                     /locus_tag="WJJ54_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HEZ7342465.1"
                     /translation="MSSGNIHIHSMTGFANTAEECGSKRINLDLRAVNHRFLDIQIRM
                     PDDLRYLESGIREKISSHIARGKVECKIQIQDTENSRQSLELNSDLVNQLAEINKDLR
                     KHHDLAKLGVADILRFPGVLASQRDNTEELTKSITELTEKALKDFTAARRREGKKLGE
                     HLLQRLESMEEIIDALSELFPTLLETHKEKIRARLAEAVGSIDNDRLQQEFALFIQKS
                     DIDEEFSRLRTHIAEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIATECTQAS
                     VELKVLIEQMREQVQNIE"
BASE COUNT         1051 a         1240 c         1325 g         1111 t
ORIGIN      
        1 aagggcatca ttcctgcacc ggcaagaatc cgaacccgaa cgtttgaaaa caatcccgaa
       61 tctccgaatt cccgcctgtg cgggaatgac gaaaaaaaca agcatccatt tgccccgaag
      121 gcagttaatc aaccctttcc gccacacacc tattccaata tccaatgaaa accatcacag
      181 aaaccctaaa tctcgccccg aaaggcaaaa acttcctgac cgccgattgg cccgcgcccg
      241 ccaatgtgaa aaccctgatt accacgcgca acggcggcgt gagccaaggt gcgtatcaga
      301 gtttgaacct cggtacgcac gtcggcgacg accctgaagc cgtgcgccgt aaccgcgaaa
      361 tcgtgcaaca gcaggtcgga ttgcccgttg cctacctcaa tcaaatccac agcaccgtcg
      421 tcgtcaatgc tgccgaagcg ttgggaggca cacccaatgc ggacgcttcc gtggacgaca
      481 cgggcaaggt tgcctgtgcc gtgatgactg ccgactgtct gcccgttcta ttttgcgaca
      541 gggcgggtac ggcggttgcc gccgcacacg cgggctggcg cggtttggcg ggcggcgtat
      601 tgcaaaacac catagccgcg atgaaggttc cgcctgtcga aatgatggcg tatctcggtc
      661 ccgccatcag tgcggatgcg tttgaagtcg ggcaggacgt gtttgatgcg ttctgcatgc
      721 ccatgcccga agccgccgcc gcatttgaag gcataggcgg cggcaaattc cttgccgacc
      781 tttacgcgct cgcccgcctg attctgaagc gtgaaggcgt gggcggcgta tatggcggca
      841 cgcattgtac ggttttggaa cgggacactt tcttttccta ccgccgcgac ggagcgacag
      901 ggcgtatggc gagcctgatt tggctggacg gcaatgccgt ctgaacacgc cgctgatata
      961 atctaccgac tttgtgcttt tgagaaaggc aagccatgaa caaactgttt cttactgccg
     1021 cagtgctgat gctgggcgcg tgcggtttcc acctgaaagg tgcagacggc atttctccgc
     1081 cgctgaccta ccggagctgg cacatcgaag gcggacaggc attgcagttt cctttggaaa
     1141 ccgcgctgta tcaggcttcg ggcagggtgg acgatgctgc cggcgcgcag atgaccctgc
     1201 gtatagacag cgtttcccaa aacaaggaaa cctacaccgt tacccgtgcg gcagtcatca
     1261 acgaatatct tttgatattg acggttgaag cgcaggtatt gaaacgcggc gagccggtcg
     1321 gcaaaccgat gaccgtgtcc gtccgccgcg tccttgctta tgccgacaac gagatcttgg
     1381 gcaaacagga agaggaagcg gcattgtggg cggaaatgcg gcaggatgcc gccgaacaga
     1441 ttgtccgccg cctgaccttt ctgaaggcgg aatgacgtgg cggcacatat cggacgcatt
     1501 gatacggacg cgcctttgaa acccctgtac gtcatccacg gcgaggaaga actgttgcgt
     1561 atcgaggcat tggacgcatt gagggcggcg gcgaagaaac aaggttacct taatcgggaa
     1621 gtttatacgg cagacaatgc tttcgattgg aacgagctgc tgcaaaccgc aggcagtgcg
     1681 ggtctgtttg ccgatttgaa gctgttggaa ctgcatatcc ctaacggcaa gcccggcaaa
     1741 accggcggcg aggcgttgca ggattttgcc gcccgcctgc cggaagatac ggtaacgctg
     1801 gttttactgc ccaaactgga gaaaacccag ctccagtcca aatggtttgc cgcattggcg
     1861 gcaaaggggg aagtgtggga agccaaaccg gtcggcgcgg cggctttgcc ccaatggata
     1921 cgcggacggc tggacaaaat cggtttgggt atcggggcag acgcattggc actgtttgcc
     1981 gagcgcgtgg aaggcaatct gttggcggca cgtcaggaaa tcgacaagct cgcgctgctg
     2041 tatccgaaag ggcataccgt caatatccat gaggcgcaaa ccgccgttgc caatgttgct
     2101 cgctttgacg tttttcagct tgccggcgca tggatgaagg gtgatgtgcc gcgcgtatgc
     2161 aggttgttgg acggattgca ggaggaaggc gaagaaccgg tgctgcttct gtgggcggtt
     2221 gccgaagacg tgcggacgct gatccggctt gccgccgccc tgaagcaggg gcagagcatc
     2281 caatccgtcc gcaacagcct caggctttgg ggtgaaaagc agacgctcgc accgcttgcg
     2341 gtcaagcgga tttccgtcgt ccgcctgctt gatgcgctta aaacctgtgc caaaatcgac
     2401 aggattatca aaggtgcgga agagggcgat tcatgggcgg cgttcagaca actcgtcatt
     2461 tcactggcag aataaagcgg caatccctaa aatccgaaaa tactgtaaaa taccgttaat
     2521 cctgaaaagt attcaccaat ccgtccgaaa acatttcaga cggcacgacc acctcaataa
     2581 aggaacatta accctatgga caataagacc aaactacgcc tcggcggcct gattctgctg
     2641 accaccgctg ttttaagcct gattatcgta ctgatcgtcg actcttggcc gcttgccatc
     2701 ctgcttgccg ccgtcatcgt cgccgccgct gcgggcggct ttgtttggac atcccgccga
     2761 cagcaacgcc agtttatcga acgtctgaaa aaattcgaca tcgatcccga aaaaggcaga
     2821 atcaacgagg caaacctgcg ccgtatgtac cacagcggcg gacaacacca gaaagatgcg
     2881 attaccctga tctgcctgtc gcaaaaatgt tcggtggacg aggcgcacgc tatgttcaaa
     2941 aaacgcccga cacgtcagga aatcaatcaa atggcggcaa aacagtcgcg cggtcagaaa
     3001 cgtccgcacc gttaaccgcc gcaaggcatc tttgcataaa tgccgtctga agcctgttgg
     3061 cgtttcagac ggcatattct gattgaaaag atgatgacac tgaaaaccgc cccgctcaaa
     3121 cgccgctttg ccgccatgct gtacgaaatg ctgctggtcg gtgcggcaac ctgtttggca
     3181 gcattgtttg ccggtattgc cgccattttt ctgaatcccg tttctatcgc ggtttctgca
     3241 ttggtaacga gtatcctgat aatgggatca tggtggcttt attttcgcgc caactggcac
     3301 ggtcaggggc agaccttggc gatgaggaca tggaaaatcg gcttgtgcga ccttaacggc
     3361 atacagccgt ctttgtacct gctgcgcctg cgctttattt gggcgtgcat atttatcgtc
     3421 ttcattccta tgcttgctta tgccggattg cgccacttcc tcggcattcc gcccaagggc
     3481 gcggccggcg cggcattgat ttggctgatt ttaccgtggg ggttcgccct gctgaatccc
     3541 gatcggcagt ttctgtatga ttttcttgca ggaacaagat tggtggcggt caaaggaaag
     3601 ccttaagcct ttataccgca aaggtttcaa actgaaaaaa tgccgtctga aagggctttc
     3661 agacggcatt tgcttatcgg ggaaaccgat tattcgatat tctgcacctg ttcgcgcatc
     3721 tgttcgatca ggactttcag ctcgaccgag gcttgggtgc attcggtagc gatggatttg
     3781 ctgcccaaag tgttggcttc gcggtttaat tcctgcatca ggaagtccag ccgtttgccg
     3841 ctgctgcctt tgtgttcggt aacgatacgg cgcacttcgg caatgtgggt gcgtaggcgg
     3901 ctgaactctt cgtcgatgtc ggatttttgg ataaagaggg caaattcctg ttgcaggcgg
     3961 tcgttgtcga tgctgccgac cgcttcggca aggcgggcgc ggattttttc tttatgtgtt
     4021 tccaacaggg taggaaagag ttcgcttaat gcatctatga tttcttccat gctttcgagg
     4081 cgttgtaaca ggtgctcgcc caattttttc ccttcgcgcc ggcgtgcggc agtaaagtct
     4141 tttaacgctt tttcagtcag ttcggtaatg ctttttgtca attcttccgt attgtccctt
     4201 tggcttgcca atacgccggg gaaacgcagg atgtcggcaa cgcccagttt tgccaaatcg
     4261 tgatgcttgc ggaggtcttt gttgatttcg gcaagctggt tcaccaaatc cgagttgagt
     4321 tccaaggact gtctgctgtt ttccgtatct tgaatttgga ttttgcattc gactttgccg
     4381 cgcgcgatat gggatgaaat tttctcgcgg ataccgcttt ccaaatagcg caaatcgtcg
     4441 ggcatcctga tttgaatatc tagaaaacgg tggttgaccg cacgcaggtc gagattgatg
     4501 cgtttgctgc cgcattcttc tgccgtattg gcaaatccgg tcatactgtg gatatggata
     4561 tttccgctgc tcatgtcgtt ctccgaagcc cgttaaaatg gaatcaatat atcacatctg
     4621 tatggcggca agcgttttcg ggtgtgaaaa attgaagatt ttgcagcggc agattggaat
     4681 cacgcgcttt tgttgctgca aggaagggaa atgtatagtg gattaac
//
LOCUS       DAWKJW010000144         4724 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.144, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000144 DAWKJW010000000
VERSION     DAWKJW010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4724)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4724)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4724
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.144"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            297..995
                     /locus_tag="WJJ54_001621"
     CDS             297..995
                     /locus_tag="WJJ54_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ7342466.1"
                     /translation="MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGL
                     VEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEH
                     VVWQKEMLTLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
                     FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMHTID
                     LLADKVREEQKAAQ"
     gene            complement(1052..2056)
                     /locus_tag="WJJ54_001622"
     CDS             complement(1052..2056)
                     /locus_tag="WJJ54_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEZ7342467.1"
                     /translation="MQRQIKLKNWLQTVYPERDFDLTFAAADADFRRYFRATFSDGGS
                     VVCMDAPPDKMSVAPYLKVQKLFDMVNVPQVLHADTDLGFVVLNDLGNTTFLTAMLQE
                     QGETAHKALLLEAIGELVELQKASREGVLPEYDRETMLREINLFPEWFVAKELGRELT
                     FKQRQLWQQTVDTLLPPLLAQPKVYVHRDFIVRNLMLTRGRPGVLDFQDALYGPISYD
                     LVSLLRDAFIEWEEEFVLDLVIRYWEKARAAGLPVPEAFDEFYRWFEWMGVQRHLKVA
                     GIFARLYYRDGKDKYRPEIPRFLNYLRRVSRRYAELAPLYALLVELVGDEELETGFTF
                     "
     gene            2126..4534
                     /locus_tag="WJJ54_001623"
     CDS             2126..4534
                     /locus_tag="WJJ54_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HEZ7342468.1"
                     /translation="MARLFSLKPLVLALGLCFGTHCAAADAVAAEETDNPTAGGSVRS
                     VSEPIQPTSLSLGSTCLFCSNESGSPERTEAAVRGSGEASIPEDYTRIVADKVEGQSQ
                     VQVRAEGNVVVERNRTTLNTDWADYDQSGDTVTAGDRFALQQDGTLIRGETLTYNLEQ
                     QTGEAHNVRMETEQGGRRLQSVSRTAEMLGEGHYKLTETQFNTCSAGDAGWYVKAASV
                     EADREKGIGVAKHAAFVFGGVPLFYTPWADFPLDGNRKSGLLVPSLSAGSDGVSLSVP
                     YYFNLAPNLDATFAPGVIGERGAVFDGQVRYLRPDYAGQSDLTWLPHDKKSGRNNRYQ
                     AKWQHRHDISDTLQAGVDFNQVSDSGYYRDFYGNKEIAGNVNLNRRVWLDYGGRAAGG
                     SLNAGLSVLKYQTLANQSGYKDKPYALMPRLSADWRKNTGRAQIGVSAQFTRFSHDSR
                     QDGSRLVVYPDIKWDFSNSWGYVRPKLGLYATYYSLNRFGSQEARRVSRTLPIVNIDS
                     GATFERNTRMFGGGVLQTLEPRLFYNYIPAKSQNDLPNFDSSESSFGYGQLFRENLYY
                     GNDRINTANSLSAAVQSRILDGATGEERFRAGIGQKFYFKDDAVMLDGSVGKKPRNRS
                     DWVAFASGSIGSRFILDSSIHYNQNDKRAENYAVGASYRPAQGKVLNARYKYGRNEKI
                     YLKSDGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGFEAKKPIEVLAGAEYKSSCGC
                     WGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPADRMDVAVPGYIPAHSLSAGR
                     NKRP"
BASE COUNT         1140 a         1448 c         1241 g          895 t
ORIGIN      
        1 ttgaaagggg tgtaaccctt ccgaaccagg gcaacgcata gggcggtgct ttatgtgccg
       61 tcctgtgtgt tggaacatca ttagttcccc aacagccgta tccgtctggg gcgacggcgc
      121 gtattgtacg acagaaaccg cttcagacgg catcgggttt gatgccgtct gaagcggttt
      181 cccgaaacga aagcttcctt ttccggcggc aaactgtatc aacacgcgga aatgcaataa
      241 aatagccgga ttccgattga tttccaacat ctgtttccaa catcacggag agccgtatga
      301 aatccagaca cctcgccctc ggcgttgccg ccctgttcgc ccttgccgcg tgcgacagca
      361 aagtccaaac cagcgtcccc gccgacagcg cgcctgccgc ttcggcagcc gccgccccgg
      421 cagggctggt cgaagggcaa aactataccg tccttgccaa cccgattccc caacagcagg
      481 caggcaaagt cgaagtcctt gaatttttcg gctatttctg tccgcactgc gcccacctcg
      541 aacctgtttt aagcaaacac gccaagtctt ttaaagacga tatgtacctg cgtaccgaac
      601 acgtcgtctg gcagaaagaa atgctgacgc tcgcacgcct cgccgccgcc gtcgatatgg
      661 ctgccgccga cagcaaagat gtggcgaaca gccatatttt cgatgcgatg gtcaaccaaa
      721 aaatcaagct gcaagagccg gaagtcctca aaaaatggct gggcgaacaa accgcctttg
      781 acggcaaaaa agtccttgcc gcctacgagt cccccgaaag ccaggcgcgc gccgacaaaa
      841 tgcaggagct gaccgaaacc ttccaaatcg acggtacgcc cacggttatc gtcggcggca
      901 aatataaagt cgaatttgcc gactgggagt ccggtatgca caccatcgac cttttggcgg
      961 acaaagtacg cgaagaacaa aaagccgcgc agtaagcccg tttgaaaaat gccgtctgaa
     1021 acttggtttt cagacggcat tttgattggg tttaaaacgt aaagcccgtt tccagttctt
     1081 catcgccgac cagttcgacc aagagcgcgt agagcggggc gagttcggca taacggcgcg
     1141 atacgcggcg cagatagttt aagaaacgcg ggatttccgg acggtatttg tctttgccgt
     1201 cgcggtagta caggcgtgcg aagatgcctg caaccttcaa gtgccgctgc acgcccatcc
     1261 attcgaacca gcggtaaaac tcgtcaaacg cttcggggac gggcaagccg gcagcccgcg
     1321 ccttttccca gtagcggata accaagtcca agacaaattc ttcttcccat tcgataaagg
     1381 catcgcgcaa cagcgacacc aaatcgtagg aaatcgggcc gtaaagcgcg tcttggaagt
     1441 ctaaaacgcc cggcctgccg cgcgtcagca tcaggttgcg gacgataaag tcgcggtgca
     1501 catagacttt gggctgcgcc aacaggggcg gcagcagcgt atcgacggtt tgctgccaaa
     1561 gttggcgttg tttgaatgtt aattcgcgcc ccaattcttt tgcgacaaac cattccggga
     1621 acaggttgat ttcgcgcagc atcgtttcac ggtcatattc gggcaaaacc ccttcacggc
     1681 ttgccttctg caattcgacc aactcgccga tggcctccaa aagcagggct ttgtgcgccg
     1741 tttcgccctg ttcctgaagc atcgcggtca aaaacgtcgt attgcccaag tcgttcaata
     1801 ccacaaaccc caaatccgtg tccgcgtgca atacctgcgg cacattgacc atatcaaaca
     1861 gtttctgcac cttcaaataa ggcgcgacac tcatcttgtc gggcggcgca tccatacaga
     1921 cgacgctgcc gccgtctgaa aacgttgcac ggaaatagcg gcggaaatca gcatccgccg
     1981 ccgcaaaagt cagatcgaag tcccgttcgg gataaacggt ctgaagccaa tttttcagtt
     2041 tgatttgtcg ttgcataaca gtactaaagc atttcaggtt acaataaacg ctattctaac
     2101 tggcaaaccg acttgagggg cgattttggc tcgtttattt tcactcaaac cactggtgct
     2161 ggcattgggc ctctgcttcg gcacgcattg cgccgccgcc gatgccgttg cggcggagga
     2221 aacggacaat ccgaccgccg gaggaagcgt tcggagcgtg tccgaaccca tacagcctac
     2281 cagcctgagc ctcggttcga cctgcctgtt ttgcagtaac gaaagcggca gccccgagag
     2341 aaccgaagcc gccgtccgag gcagcggcga agcatccatc cccgaagact atacgcgcat
     2401 tgttgccgac aaggtggaag gacagtcgca ggtgcaggtg cgtgccgaag gcaacgtcgt
     2461 cgtcgaacgc aaccggacga ccctcaatac cgattgggcg gattacgacc agtcgggcga
     2521 caccgttacc gcaggcgacc ggttcgccct ccaacaggac ggtacgctga ttcggggcga
     2581 aaccctgacc tacaatctcg agcagcagac cggggaagcg cacaacgtcc gtatggaaac
     2641 cgaacaaggc ggacggcggc tgcaaagcgt cagccgcacc gccgaaatgt tgggcgaagg
     2701 gcattacaaa ctgacggaaa cccaattcaa cacctgttcc gccggcgatg ccggctggta
     2761 tgtcaaggcc gcttccgtcg aagccgatcg ggaaaaaggc ataggcgttg ccaaacacgc
     2821 cgccttcgtg ttcggcggcg ttcccctttt ctatacgcct tgggcggact tcccgcttga
     2881 cggcaaccgc aaaagcggcc tgcttgttcc ctcactgtcc gccggttcgg acggcgtttc
     2941 cctttccgtt ccctattatt tcaaccttgc ccccaatctc gatgccacgt tcgcgcccgg
     3001 cgtgatcggc gaacgcggcg cggtctttga cgggcaggta cgctacctgc ggccggatta
     3061 tgccggccag tccgacctga cctggctgcc gcacgacaaa aaaagcggca ggaataaccg
     3121 ctatcaggcg aaatggcagc accggcacga catttccgac acgcttcagg cgggtgtcga
     3181 tttcaaccaa gtctccgaca gcggctacta ccgcgacttt tacggcaaca aagaaatcgc
     3241 cggcaacgtc aacctcaacc gccgtgtatg gctggattat ggcggcaggg cggcgggcgg
     3301 cagcctgaat gccggccttt cggttctgaa ataccagacg ctggcaaacc aaagcggcta
     3361 caaagacaaa ccgtatgccc tgatgccgcg cctttccgcc gattggcgca aaaacaccgg
     3421 cagggcgcaa atcggcgtgt ccgcacaatt tacccgcttc agccacgaca gccgccaaga
     3481 cggcagccgc ctcgtcgtct atcccgacat caaatgggat ttcagcaaca gctggggtta
     3541 cgtccgtccc aaactcggac tgtacgccac ctattacagc ctcaaccgct tcggcagcca
     3601 agaagcccga cgcgtcagcc gcactctgcc cattgtcaac atcgacagcg gcgcaacttt
     3661 tgagcggaat acgcggatgt tcggcggcgg agtcctgcaa accctcgagc cgcgcctgtt
     3721 ctacaactat attcctgcca aatcccaaaa cgacctgccc aatttcgatt cgtcggaaag
     3781 cagcttcggc tacgggcagc tctttcgcga aaacctctat tacggcaacg acaggattaa
     3841 caccgcaaac agcctttccg ccgccgtgca aagccgtatt ttggacggcg cgacggggga
     3901 agagcgtttc cgcgccggca tcggtcagaa attctatttc aaggatgatg cggtgatgct
     3961 tgacggcagc gtcggcaaaa aaccgcgcaa ccgttccgac tgggtggcat ttgcctccgg
     4021 cagcatcggc agccgcttca tcctcgacag cagcatccac tacaaccaaa acgacaaacg
     4081 cgccgagaac tacgccgtcg gtgcaagcta ccgtcccgca cagggcaaag tgctgaacgc
     4141 ccgctacaaa tacgggcgca acgaaaaaat ctacctgaag tccgacggtt cctattttta
     4201 cgacaaactc agccagctcg acctgtccgc acaatggccg ctgacgcgca acctgtcggc
     4261 cgtcgtccgt tacaactacg gttttgaagc caaaaaaccg atagaggtgc tggcgggtgc
     4321 ggaatacaaa agcagttgcg gctgctgggg cgcgggcgtg tacgcccaac gctacgttac
     4381 cggcgaaaac acctacaaaa acgctgtctt tttctcactt cagttgaaag acctcagcag
     4441 tgtcggcaga aaccccgcag acaggatgga tgtcgccgtt cccggctaca tccccgccca
     4501 ctctctttcc gccggacgca acaaacggcc ctgaccgtcg gaaacccggc aggagcaccg
     4561 ttcccgaaca agacggcatt ccaccgacaa ccccaaaccc gccatcaaag gtaggattca
     4621 aacgataagg aaagaatgat gaaaatcaaa gccctgatga ttgccgccgc attgctggca
     4681 gcagccgatg tccacgccgc accgcaaaag gcaaaaaccg catc
//
LOCUS       DAWKJW010000145         4634 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.145, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000145 DAWKJW010000000
VERSION     DAWKJW010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4634)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4634)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4634
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.145"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(210..1148)
                     /locus_tag="WJJ54_001624"
     CDS             complement(210..1148)
                     /locus_tag="WJJ54_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ7342469.1"
                     /translation="MLELNGLCKRFGNKTVADNICLTVGRGKILAVLGRSGCGKSTLL
                     NMIAGIVRPDGGEIWLNGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQK
                     MPKAEAERLAMAALAEVGLENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFS
                     SLDTHLRDRLRRMTAERIRNGGIPAVLVTHSPEEACTTADEIAVMHEGRILQYGTPET
                     LVKTPSCVQVARLMGLPNTDDDRHIPQHAVRFDQDGMECCVLSRTCLPESFSLSVLHP
                     EHGILWLNLDMPHAGEISGNDTVRIHIEDREIVRFR"
     gene            complement(1157..2032)
                     /locus_tag="WJJ54_001625"
     CDS             complement(1157..2032)
                     /locus_tag="WJJ54_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEZ7342470.1"
                     /translation="MPTVRFTESVSKHDLDALFEWAKASYGAESCWKTLYLNGLPLGN
                     LSPEWAERVKKDWEAGCSESSDGIFLNADGWSDMGGRLQHLTRTWNKAGLLHGWRNEC
                     FDLTDGGGNILFSLERAAFRPFGLLSRAVHLNGLTESDGRWHFWIGRRSPHKAVDPDK
                     LDNTAAGGVSSGELPSETVCRESSEEAGLDKTLFPLIRPVSQLHSLRPVSWGVHNEIL
                     YVFDAVLPETFLPENQDGEVACFEKMDIGSLVATMLSGNMMHDAQLVTLDAFCRYGLI
                     DAAHPLSEWLDGIRL"
     gene            complement(2214..2290)
                     /locus_tag="WJJ54_001626"
     tRNA            complement(2214..2290)
                     /locus_tag="WJJ54_001626"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2254..2256),aa:Met,seq:cat)
     regulatory      2440..2539
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2630..4531
                     /gene="thiC"
                     /locus_tag="WJJ54_001627"
     CDS             2630..4531
                     /gene="thiC"
                     /locus_tag="WJJ54_001627"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEZ7342471.1"
                     /translation="MTTPKKTAKTSGNEARELADLSEDIGIRFKYPNSERVYLQGSRD
                     DIRVPLREIRQDDTYTAQGAEANPPIPVYDTSGVYGDPAAHIDLKQGLPHIRTAWLNE
                     RGDTEILPKLSSEYGIERAHDPKTAHLRFNQITRPRRAKAGRNVTQLHYARQGIITPE
                     MEFVAIRERLKLDELSQKPEYAKLLKQHAGQSFGANIPTHPDQITPEFVRREIAAGRA
                     IIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDL
                     STGAHIHETREWIIRNAPVPIGTVPIYQALEKTGGIAEDLTWDLFRDTLIEQAEQGVD
                     YFTIHAGVLLRYVPMTANRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAY
                     DVSFSLGDGLRPGCIADANDESQFAELHTLGELTDKAWKHDVQVMIEGPGHVPLQRVK
                     ENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHL
                     GLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPE
                     RAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEF
                     VKKGAKIYS"
BASE COUNT         1131 a         1298 c         1215 g          990 t
ORIGIN      
        1 cctgcgcggg aatgacgatg aaaagattgt tgtcgcttcg gataaatttt tgccgtgttg
       61 ggttctagat tcccgctttt gcgggaatga cggcagggtg gtttctgttg tttcggataa
      121 attttgcagc cctgataaaa aatatggctg ctttggtaaa aaaatgccgt ctgaaaggtt
      181 ttcagacggc attttgtttt taagaagcat cagcggaagc ggacgatttc cctgtcttcg
      241 atatggatgc gtaccgtatc gtttcccgat atttcaccgg cgtgcggcat atcgaggttc
      301 agccacagga tgccgtgttc cggatggagg acggacaggc tgaacgattc gggcaaacag
      361 gtacgggata atacgcagca ctccatgccg tcttggtcga aacgcaccgc atgttgcgga
      421 atatggcggt catcgtcggt attgggcagc cccatcagtc gggcaacctg cacgcaggac
      481 ggtgttttga ccaatgtttc gggtgtgccg tattgtagaa tcctcccttc atgcatcacg
      541 gcaatttcgt ctgccgtcgt acaggcttct tcgggcgaat gagtaaccaa gacggcaggg
      601 atgccgccgt ttcggatacg ttcggcggtc atgcggcgca gccggtcgcg caaatgcgtg
      661 tccaaactgg aaaacgattc gtccagcaac agcagggaag ggcggacaac caaagcgcgc
      721 gccagtgcca accgttgttt ctcgcctccg gaaagttttt caggcttacg gtgcgcctcg
      781 ttttccagtc cgacttcggc aagtgccgcc atggcaaggc gttcggcttc ggctttcggc
      841 attttttgca ttttcaaacc gaatgccgca ttttccagcg cactcatatg gggaaacagc
      901 gcgtaatctt gaaacatcag agaaatacgg cgtttttcgg gcggcatacg ggtaatgttt
      961 tccccgttca gccatatttc cccaccgtcc ggccggacaa tccccgcaat catattcagc
     1021 agggtggatt ttccgcatcc cgaccgcccc aaaacggcga gtattttgcc gcgcccgaca
     1081 gtcaggcaga tgttgtcggc gacggtttta ttgccgaagc gtttgcagag tccgttcagt
     1141 tcaagcatgg cgcatcctat aaacgtatgc cgtccagcca ctcggacagc ggatgggcgg
     1201 catcaatcag accgtaacgg caaaacgcgt ccagcgtaac cagttgcgcg tcgtgcatca
     1261 tgtttcccga caacatggtg gcaaccaagc tgccgatgtc cattttctca aaacacgcaa
     1321 cctcaccgtc ctgattttca ggtaggaagg tttcgggcag gacggcatcg aatacataca
     1381 ggatttcatt gtgcacaccc cagctgacgg ggcgcaggct gtgcagctgc gataccgggc
     1441 ggatgagcgg aaacagcgtt ttatccaaac cggcttcttc gctgctttcg cgacacacgg
     1501 tttcagacgg caattcaccg ctggaaacac cgccggcggc agtattgtcg agtttgtcgg
     1561 gatcgactgc tttgtgcgga ctgcgcctgc ctatccagaa atgccatcgg ccgtccgatt
     1621 cggtcagacc gttgagatgg acggcgcggc tgagtagtcc gaacgggcgg aaagcggcgc
     1681 gttcaagtga gaacaagata ttgccgccgc cgtcggtcag gtcgaaacac tcgttgcgcc
     1741 atccgtgaag cagccccgcc ttgttccatg tgcgggtgag gtgctgcaag cggccgccca
     1801 tatctgacca gccgtccgca ttcagaaaaa tgccgtctga agactccgag cagcctgcct
     1861 cccagtcttt tttgacgcgc tccgcccatt ccggcgacag gttgcccaaa ggcaggccgt
     1921 tcagatacag tgttttccag caactttctg caccgtaact tgcttttgcc cactcgaaca
     1981 gggcatcaag gtcgtgtttg ctgacggatt cggtaaaacg gacggtcggc atagtcggct
     2041 ttcttgaaga caatgcggaa gattgtagcc aaactgcctg aatttgcaac cgcaaacaga
     2101 cggcgggctg ccgttccgat attgcggcag gaaggaaaat ccggcaaaaa acggaggcgg
     2161 caggaaacag gcaaaacaaa acccctcggc attgaaccga ggggtttgat atttggttgc
     2221 gggagcagga ttcgaaccta cgaccttcgg gttatgagcc cgacgagcta ccatgctgct
     2281 ccatcccgcg tcagaagatg aaactatacg gcagattttt tatgttgtca aacattattt
     2341 ccgcgaaaaa tcataaaatt ttgccgtccg gcggtttatg cctgatttga aatatcattt
     2401 tctttacaaa agttcatgtt cgtgatttaa ttttggttaa catcgaaaca ggggtgctgc
     2461 ctgatgttca ggcggctgag aaataccctt tacacccgat cgggataata cctgcgtggg
     2521 gagttttcac ggattctgtc tttcagacag cattggtttt caaatgccgt ctgaaaacgc
     2581 aaaacgctcc tgtttcttta ttctaaacga gaaaacagga gcatttttta tgactacgcc
     2641 aaaaaaaacc gccaaaactt ccggcaacga agcgcgcgaa cttgccgact tgagcgaaga
     2701 catcggtatc cgcttcaaat atccgaactc ggaacgcgtg tatctgcaag gcagccgcga
     2761 cgacatccgc gtgcctttgc gtgaaatccg tcaggacgac acctatacgg cgcaaggcgc
     2821 ggaagccaac ccgccgattc ccgtctatga caccagcggc gtgtacggcg atccagcggc
     2881 acacatcgac ctgaaacaag gtctgccgca catccgcacc gcatggctga acgaacgcgg
     2941 cgataccgaa atcctgccca agctctccag cgaatacggc atcgaacgcg cacacgatcc
     3001 gaaaaccgcc catctgcgtt tcaaccaaat tacccgcccg cgccgcgcca aagcaggacg
     3061 taacgttacc cagctccatt acgcccgcca aggcatcatc acgccggaaa tggagtttgt
     3121 cgccatacgc gaacgtttaa aattagacga attgtcccaa aaaccggaat acgccaagct
     3181 cttgaaacag cacgcagggc aaagtttcgg cgcgaatatc ccgacccatc ccgaccaaat
     3241 cacgcctgaa ttcgtgcgcc gagaaattgc cgccggacgc gcgattatcc ccgccaacat
     3301 caaccacccc gaactcgaac cgatgattat cggccgcaac ttccgcgtca aaatcaacgg
     3361 caacttgggc aattccgccg tcacttccag tctgaccgaa gaagtcgaaa aaatggtgtg
     3421 gtcgctgcgt tggggcgcgg acacaattat ggacttatcc acaggcgcgc acatccatga
     3481 aacgcgcgaa tggattatcc gcaacgcgcc cgtccccatc ggcaccgtgc ctatttatca
     3541 ggctttggaa aaaaccggcg gcattgccga agatttgact tgggatttgt tccgcgacac
     3601 cttaatcgag caggcggaac aaggcgtgga ctatttcacc atacacgcgg gcgtgttgct
     3661 gcgttatgta ccgatgaccg ccaaccgcct caccggcatc gtctcgcgcg gcggttcgat
     3721 tatggcgaaa tggtgtttgg cacatcatcg ggaaaatttc ctctacacgc atttcgacga
     3781 aatctgcgaa attatgaaag cgtatgacgt atcgttcagc ctcggcgacg gcctgcgccc
     3841 cggctgcatt gccgatgcca acgacgaatc ccaattcgcc gaactgcaca ccttgggcga
     3901 attgaccgat aaagcgtgga aacatgacgt acaagtcatg atcgaaggcc ccgggcatgt
     3961 accgctgcaa cgcgtcaaag aaaatatgac cgaagagctg caacactgtt ttgaagcgcc
     4021 gttttacacg ctcggcccgc tcgttaccga catcgcaccc ggctacgacc acatcacctc
     4081 gggcataggc gcggccaata tcggctggta cggcacggcg atgctttgtt acgttacccc
     4141 caaagaacat ttggggctgc ccgacaaaga agacgtgcgc accggcatca tcacctacaa
     4201 actcgccgcc cacgccgccg atctcgccaa aggctggccg ggcgcacaat tacgtgacaa
     4261 cgccctgagc aaggcgcgtt tcgagttccg ttggcgcgac caatttcgct taagcctcga
     4321 ccctgaacgt gccgaaagct tccacgacga aaccctgcct gccgaaggcg cgaaaatcgc
     4381 ccacttctgc tcaatgtgcg gccccaaatt ctgctcgatg aaaatcacgc aggaagtgcg
     4441 cgactacgcc gacaagcaaa aagcccaacg gcagggcatg gaggaaaaag cggtcgagtt
     4501 cgtcaaaaaa ggcgcgaaga tttacagttg aaacgtcaag caaaaaatgc cgtctgaaac
     4561 ccggaaaaaa ggcttcagac ggtattcttt cgcttgtgaa aatatagtgg attaacaaaa
     4621 atcaggacaa ggcg
//
LOCUS       DAWKJW010000146         4601 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.146, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000146 DAWKJW010000000
VERSION     DAWKJW010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4601
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.146"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(1..93)
                     /locus_tag="WJJ54_001628"
                     /pseudo
     CDS             complement(1..93)
                     /locus_tag="WJJ54_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            complement(1101..1871)
                     /gene="xth"
                     /locus_tag="WJJ54_001629"
     CDS             complement(1101..1871)
                     /gene="xth"
                     /locus_tag="WJJ54_001629"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEZ7342472.1"
                     /translation="MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPA
                     AALQMMGWHCVWSGQKTYNGVAIVSRSAPEDVYIGLPALPDDPQRRVIAATVGGVRVI
                     NVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMARHGKLVLLGDFNIAPADADCYDPE
                     KWHEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDH
                     ILVSPAMAAALKDVRVDLETRALERPSDHAPVTAEFDW"
     gene            complement(1931..2212)
                     /locus_tag="WJJ54_001630"
                     /pseudo
     CDS             complement(1931..2212)
                     /locus_tag="WJJ54_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709912.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
     gene            complement(2619..3500)
                     /gene="nadC"
                     /locus_tag="WJJ54_001631"
     CDS             complement(2619..3500)
                     /gene="nadC"
                     /locus_tag="WJJ54_001631"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEZ7342473.1"
                     /translation="MPSENTLFPLPDTLLRPMVEQALSEDLGRRGDITSAAVIAPDKT
                     AKLFLVSREDGVIAGMDLARLAFQTMDPSVRFQAEIRDGQVVRAGQTLAAVEGNARAL
                     LAAERTALNYLTHLSGIATATARAVAEVAEYGTDIVCSRKTIPLLRVLQKYAVRAGGG
                     VNHRMGLDDAVLIKDNHLAYCGSIAQAVRQAKQAVGALTCVEIEVDTLAQLDEAIAAG
                     AERILLDNMDDETLKEAANRCHTQTAHPHTVYCEASGGIGFDRLKRVAQTGVDGIALG
                     YLTHSSRSLDIGLDFLA"
     gene            complement(3575..4513)
                     /locus_tag="WJJ54_001632"
     CDS             complement(3575..4513)
                     /locus_tag="WJJ54_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342474.1"
                     /translation="MDAYPEAEAPPQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGP
                     LSPLRNSLQAGVKLWVAKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREA
                     ADSILHPDAKWQDCYGYFPWEDLRTDGGQRDAVVGRLRIWANSADTEEVRQMRLKRIH
                     LCWGVEPENWSEEYVLQRYEMLYESGLIVEAAEPQANFDFALTGQPMRHDHRRVLATA
                     LSRLRAKIKYRPVIFELMPPEFTLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSD
                     TGVSGSKGRPAQLCRFRDDVLPDRLISDIGLPLGSR"
BASE COUNT         1071 a         1147 c         1226 g         1157 t
ORIGIN      
        1 gtcgatttgt ttgtccaatt cgtcaatcag ccggtcaaaa tgggcaatca gttgtttgac
       61 gcttccgact tgcgtttcat gaaactgatg cagatatagt ggattaacaa aaatcaggac
      121 aaggcgacga agccgcagac agtacaaata gtacggcaac gctgtactgg tttaaattta
      181 atccactata ttttgtaata gctgccatta tgcctactag gatatatacc ttctatataa
      241 tccttattta aataaaaacc cttataaaaa tctgtgttat ctgtcgggat tgaaaaaaag
      301 attttatctt tctcatcagg tttatatttg ctatcaatat caaaaagaga ataaggatta
      361 caatgagttc gacatactag gtaaaaattt atatcttgga tcatgaaata ttcgatattt
      421 atcaggatcg aaagatgcta aaaattcatc aatatcggta ctggatattt tgtcatcact
      481 aataaacatc gctagagatg ggcgactttg attttccatt tgttgattag taaaggatat
      541 aaatactaac ttgccattgt caaaccacat agatttatat agtggattaa atttaaacca
      601 gtacgtcgtt gcctcgcctt gccgtactat ttgtactgtc tgcggcttcg tcgccttgtc
      661 ctgatttttg ttaatccact atagttattg cctttgggag aatcaattct gacagcacat
      721 aacataggtt catctttaca gtcgttatat tgggtttcat caaactcaac tgcatagcac
      781 aataaaggca ataggaaaaa aaggagatta atttattact atacataagg cagcctgatt
      841 attcattcta aaataaatcc ggtttttaat atttgattct gctccggatt atatacataa
      901 taaattttac tgctccaaaa tctgatatta accctatgga tttcataaat ttttcagaaa
      961 aataggctgt gcttgaacaa tccgccgact ccggctgttt gtcagggaaa ggcaattatt
     1021 tttcggtcag gcagaaagtt atcctatcga atcacttgaa gatatgaatg cttgtcaacg
     1081 ccatatcaaa acacggtctt ttaccaatcg aattctgccg tcaccggcgc gtggtcgctc
     1141 ggacgctcca gcgcgcgcgt ctccaaatcg acacggacat ccttcaacgc cgccgccatc
     1201 gcaggcgaca ccaaaatatg gtcgatacgc aggcccagtt tgcgttggaa catcgcgccg
     1261 cgatagtcga accaggtata gaacgcgcct tcgggatgga cttggcgcag gctgtcggtc
     1321 agtcccaaat ccagcaggtt ttgaaaccac tgccgttcga cggacgaaca gtggattttt
     1381 tcgtgccatt tttcagggtc gtaacagtcc gcatcggcag gcgcgatatt gaaatcgccc
     1441 aacagcacca gtttgccgtg gcgtgccatt tcatcgcgga caaattcggt taacgcggca
     1501 aaccattgtt ctttatattt gaatttcggg ctgtcgaggg cttcgccgtt gacgcaatag
     1561 acattgatga cgcgcacgcc gccgacggtt gccgcaatca cgcgccgttg cggatcgtcc
     1621 ggcagcgcgg gcagcccgat atacacgtct tccggcgcgc tgcggctgac gattgccacg
     1681 ccgttgtagg ttttctgccc gctccaaaca cagtgccagc ccatcatctg caaggcggcg
     1741 gcgggaaact tgtcctgatc gagtttgagt tcctgtaaaa ccaaaatatc gggcggattg
     1801 tcggcaagca ggttttgcac ctgcggcagc cgcacattga gcgaattgac gttccaagtg
     1861 gtgattttca taacatttcc gaaaaatgcc gtctgaaacg ttcagacggc aaaaggaaag
     1921 gattttaaca ctataccgcg cgtttgtttt ccaaatcgcg gattgtctgc agaatcgttg
     1981 ccgcgtcttc ggaaatcagg cggtattcga taatgcggtg ctaacgcgta aagtccacca
     2041 gaccttccac gcgcagtcgg ctcaaatggt tggaaaccgc tgtcgcaggc atggacaggg
     2101 attcggacag ctcggcaata ttgcaatcgc cgtccaacag ttggagcagt atcgccatac
     2161 gttcgggatg cgccataagt ttgagtatgg tgtggagcgg tattgtgttc atcggtattc
     2221 ctaaaacctt ttccgcccgc caagcggatt gacgggcggc agatatggat gattgtgatt
     2281 atctttataa attatattat aaatcaatta tttatatatg attgtacagg attgtatgtt
     2341 ccttttacca ctatttttgc aaacaagcgt aaaaggcgga tcttcagacg gcataaaact
     2401 gccgcgcccg tcctttcccc tgccctgccg atgcctccgc gctgtcgggc aaacaaaata
     2461 cctgcctgaa acgctgtttt ttctaaagca tcacgacctt cacgaaaaat gccgtctgaa
     2521 gaatatttca gacggcattt cctccttgag gcaataaccg gattacggtt aggcggttcc
     2581 ttgtctgaca tatcagacaa ctgccgacac cctaaaactc atgccaagaa atccaaacct
     2641 atgtccaacg aacggctgct gtgggtcaga tagccgagag cgatgccgtc cacgccggtt
     2701 tgcgccacgc gcttcagtcg gtcgaagccg atgccgcccg atgcttcgca atagacggtg
     2761 tgggggtggg cggtttgcgt gtggcagcgg tttgccgctt ctttcagggt ttcgtcgtcc
     2821 atgttgtcca gcaaaatccg ttccgcgccc gctgcgatgg cttcgtccag ttgtgccaac
     2881 gtgtccactt cgatttccac gcaggtcaat gctccgaccg cctgttttgc ctgccgaacg
     2941 gcttgggcga tgctgccgca ataggcgagg tggttgtctt tgatgagcac ggcgtcgtcc
     3001 aagcccatgc ggtggttcac gccgccgcct gccctgacgg cgtatttttg caggacgcgc
     3061 agcaggggga tggttttgcg gctgcacacg atgtctgtac cgtattcggc gacttcggca
     3121 acggcacgcg cggtggcggt ggcgatgccg cttaagtgcg tgaggtagtt gagcgcggtg
     3181 cgttcggcgg cgagcagcgc gcgggcgttg ccttcgacgg cggcaagcgt ctgacctgcg
     3241 cggacgactt gcccgtctcg gatttcggct tggaagcgaa cggacggatc catcgtctga
     3301 aaggcgaggc gcgccaagtc catgccggcg ataacgccgt cttcgcggct gacgaggaag
     3361 agtttggcgg ttttgtcggg ggcgataacg gcggcggacg taatatcgcc gcgcctgccc
     3421 aaatcttcgc tcaaggcttg ttccaccatg gggcgcaaca gggtgtcggg cagggggaag
     3481 agggtgtttt cagacggcat ggggtttcct ttgttgaaaa agattgatgt tgcaccgatg
     3541 ggcaaaactt cgtttgatgt cgtctgaaaa cgggctaacg gctgcccagc ggcaatccga
     3601 tgtccgaaat cagcctgtcg ggcaggacgt cgtcgcggaa gcggcaaagc tgcgcgggac
     3661 ggcctttgct gcccgatacg ccggtatccg acggctcgat aaggttttgc tgctgaatct
     3721 ggcggcggaa gttttgcttg tgcagcaatc tgccgctgat ggcttcgacg ctgttttgca
     3781 gttgcagcaa cgtgaattcg ggcggcatca gttcgaaaat cacggggcgg tatttgattt
     3841 tggcgcgcag gcgggacagg gcggtcgcca atacgcggcg gtggtcgtgg cgcatgggct
     3901 gccctgtgag cgcgaaatcg aagtttgcct gcggctcggc ggcttccact atcaggccgc
     3961 tttcatacag catttcatag cgttgcaaaa cgtattcttc cgaccagttt tccggttcga
     4021 ccccccaaca caaatgaatg cgcttgagcc gcatttgacg cacttcctcc gtgtccgccg
     4081 agtttgccca aatgcgcagt cggccgacga cggcgtcgcg ctgtccgccg tcggtgcgca
     4141 agtcttccca cgggaaatag ccgtagcagt cctgccattt cgcatccggg tgcaggatgc
     4201 tgtcggctgc ctcgcgcacc agccccaaat agctgacgta caagacgggc atgccgtgtt
     4261 cgttgcggcg gtgggtatcg acaaaggtgt aaagctgttc cacatagccc ataggctgcg
     4321 aagtctgctt ggcaacccac agcttcacgc ccgcctgcag ggaattgcgc agaggggaga
     4381 gcgggccgtt gggcaggagc gtgccttggg cgacggttaa tacccgcagg ccgccgtcgg
     4441 taacagcaat caatacggga accagctcga cgatgctttg cggcggggct tcggcttcgg
     4501 ggtaggcatc catgctcggc tttctgcggg tggaaaaggc tttattgtat agtggattaa
     4561 caaaaatcag gacaaggcga cgaagccgca gacagtacaa g
//
LOCUS       DAWKJW010000147         4574 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.147, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000147 DAWKJW010000000
VERSION     DAWKJW010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4574
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.147"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(58..1851)
                     /locus_tag="WJJ54_001633"
     CDS             complement(58..1851)
                     /locus_tag="WJJ54_001633"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEZ7342475.1"
                     /translation="MQLDIDRLVAYFGGVNALAEALKQHDPENAATTAAIYKWRTRGS
                     LPLAQLQKLTALAESQGRPLDLNAFLQKNESLERTEMTQTNRVIIFDTTLRDGEQSPG
                     AAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIE
                     RDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV
                     EFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNG
                     GKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRH
                     DLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKHRET
                     YEIMSAESVGWATNRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFKELADKK
                     REIFDEDLHALVSDEMGSMNAESYKFISQKISTETGEEPRADIVFSIKGEEKRASATG
                     SGPVDAIFKAIESVAQSGATLQIYSVNAVTQGTESQGETSVRLARGNRVVNGQGADTD
                     VLVATAKAYLSALSKLEFSAAKPKAQGSGTI"
     gene            2096..3205
                     /gene="proB"
                     /locus_tag="WJJ54_001634"
     CDS             2096..3205
                     /gene="proB"
                     /locus_tag="WJJ54_001634"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEZ7342476.1"
                     /translation="MKYKRIVFKVGTSSITHSDGSLSRGKIQTIACQLAALHHAGHEL
                     VLVSSGAVAAGFGALGFKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILL
                     SRADFADKRRYQNAGGALSVLLQRRAVPIINENDTVSVEELKIGDNDTLSAQVAAMIQ
                     ADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIK
                     AATIATESGVPVYICSSLKPDALAEAAEHQADGSFFVPRAKGLRTQKQWLAFYSESRG
                     SVYVDEGAEHALSEQGKSLLMSGIAGIEGHFSRMDTVTVYSKATKQPLGKGRVLFGSA
                     AAEDLLKSRKAKGVFIHRDDWISITPEIRLLLTEF"
     gene            3218..4480
                     /locus_tag="WJJ54_001635"
     CDS             3218..4480
                     /locus_tag="WJJ54_001635"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEZ7342477.1"
                     /translation="MSNTQKQLALAKAAKKSVNTADTEEKNRALLAMADSLEAAAADI
                     LAANRQDLEAAAGNIPESMTDRLLLDEKRIGAMADGIRAVAALPDPVGEILETSTLPN
                     GLEIVKKRVAMGVIGIIYESRPNVTSDAAALALKSGSAVVLRSGKDAFQSARAIVAAL
                     KAGLAQTRIDPDALQLIEDTGREGSYEMMRAKDYLDLLIPRGGAGLIRAVVENAVVPV
                     IETGTGIVHIYIDKDADWDKALRIVYNAKTSRPSVCNSMEVLLVHEDIAADFLPKLER
                     LLVRDRIEAGLPPVRFRLDPQAARHIGGEAAGADDFDTEFLDYILAVKTVASVEEAVW
                     HIETHSTHHSDGIVTENRHAADYFTTHIDSAAVYVNASTRFTDGGEFGLGCEMGISTQ
                     KLHARGPMGLKELTSYKYIVQGTGQVRE"
BASE COUNT         1043 a         1248 c         1272 g         1011 t
ORIGIN      
        1 gccgcaatgc cgtctgaagc ctttttatgc ttcagacggc atcgtctgtt ttcacgctca
       61 aatcgtaccg ctgccttgcg ctttcggttt ggcggcacta aattccagtt tgctcaaagc
      121 ggaaaggtag gctttggcag tggcaaccaa aacgtcggta tccgcgccct gaccgttgac
      181 gacgcggttg ccgcgtgcca gacggacgct ggtttcgcct tggctttccg taccttgcgt
      241 gacggcgttg acggaataaa tctgcaaagt cgcgccgctt tgcgccacgc tttcaatcgc
      301 tttgaaaatt gcatcaaccg gaccggaacc ggttgcggaa gcgcgttttt cttcgccttt
      361 gatgctgaac acgatgtcgg cgcgcggctc ttcgccggtt tcggtgctga ttttttggga
      421 gatgaatttg tagctctcgg cattcatgct gcccatttcg tcggatacca gtgcgtgcag
      481 gtcttcatcg aagatttcgc gttttttgtc ggcgagttct ttgaagcggg caaacgcggc
      541 gttcagtgcc tcttcgcttt ccaactcgat gcccaaatcc gccagcttgg ttttgaaggc
      601 gttgcggccg gacaatttgc ccaagctcaa acggtttgtt gcccagccga ccgattcggc
      661 ggacataatc tcgtaagttt cgcggtgttt cagcacccca tcctgatgga tgcccgattc
      721 atgcgaaaag gcattggcac cgacaatggc tttgttgggc tgcacgggat agcccgtaat
      781 ggtggacacc agtttggacg aaggcacgat ttgcgtggta tcgatgccgg tttccaagcc
      841 gaacaagtcg tggcgcactt tcaacgccat cacgatttct tcaaccgaag cattgcctgc
      901 acgttcgccc aagccgttga cagtacattc cacctgacgc gcgccgcctt ttaatgcggc
      961 aagcgaattg gcaaccgcca agcccaaatc gttgtggcag tgtgccgacc aaacgacttt
     1021 gccgccgttg ggcgttttgg caatcagttc gcggaaaaat tcttcggttt tgtacgggat
     1081 ggaatagccg acggtatcgg gaatattgat ggtggtcgcg cccgcttcaa tcaccgcgcc
     1141 gcagatttcg gcaaggaaat cgatttccga acgcaacgcg tcttcgcagg aaaattccac
     1201 atcgtcggtg tattcacgag cgattttcac cgctttgacc gccgcctcaa tcacctgctt
     1261 cggcttcatc ttcaatttgt actccatatg gatggggctg gtggcgatga aggtgtggat
     1321 gcgttttttc ggcgcgggcg caacggcctc acccgcctga cggatgtccc gctcgatggc
     1381 gcgggacaat gaacagaccg ttgatttggt aatggttttc gcaatcgcat tgaccgcctc
     1441 gaaatcgccc gggctggcag cggcaaaacc cgcttcgatg atgtccacac ccaatttttc
     1501 cagctggcgg gcgacgcgga ttttttcctc tttggtcata gcggcgccgg gcgactgctc
     1561 gccgtcgcgc agggtggtat caaaaataat tacgcggttg gtctgtgtca tttctgttct
     1621 ctccagagat tcgttttttt gtaaaaaagc attcaaatcc agcggtctgc cttgcgattc
     1681 ggcaagcgcg gtcagctttt gcagttgcgc cagaggcagc gagccgcgcg tgcgccattt
     1741 atagatggcg gcggtcgtcg cggcattttc gggatcgtgc tgtttcaacg cttcggcaag
     1801 cgcgttcacg ccgccgaaat aagcaaccaa gcggtctata tctaattgca tggtagtcct
     1861 tgtctaaaat aaatcagcct acagcagaaa tatggacagg attatacgca ttttggacaa
     1921 aacggcaata taaatttgaa aaatctcaat aagccgccat agattttatt aattttatac
     1981 attttgtcca ttttattgca gacgcggcgt gattgttgac aattgcgtca gaacagggca
     2041 aattcggcgg cacaaggtgg caacgagaca ggacaaacca acaaggacgg aaacaatgaa
     2101 atacaaaaga atcgtattta aagtcggcac atcttcgatt acccattcgg acggcagtct
     2161 ctcgcgcggc aaaatccaaa ccatcgcctg ccagcttgcc gcattgcatc atgcgggaca
     2221 cgagctggtc ttggtgtctt ccggcgcggt tgcggcaggg ttcggtgcgc tgggtttcaa
     2281 aaaacgtccg gtcaaaatcg ccgacaaaca ggcttccgcc gccgtcgggc aggggctgct
     2341 gatggaagaa tatacggcaa acctgtcttc agacggcatc gtgtccgcgc aaatcctgct
     2401 cagccgcgcc gactttgccg acaaacgccg ctaccaaaat gccggcggcg cactttccgt
     2461 gctgctgcaa cgccgcgccg tccccatcat caatgaaaac gatacggttt cggttgagga
     2521 attgaaaatc ggcgacaacg acacattgag tgcgcaagtg gcggcgatga tacaggcaga
     2581 cctcttggtg ctgctgaccg acatagacgg tctttacacg ggcaacccga acagcaatcc
     2641 cgatgccgta cggctggaca aaatcgaaca catcaaccat gaaatcatcg aaatggcggg
     2701 cggatcgggt tcggcaaacg gcacgggcgg tatgctgacc aaaatcaaag cggcgacgat
     2761 tgcgaccgaa tccggcgtac cggtgtatat ctgttcctcg ctcaaacccg atgcacttgc
     2821 cgaagctgcc gaacatcagg cggacggctc gtttttcgtc ccccgtgcca aaggtttgcg
     2881 gacgcagaag caatggctgg cgttctattc cgaaagccgg ggcagcgttt atgtggacga
     2941 aggtgcggaa cacgctttgt ccgaacaggg gaaaagcctg ctgatgtcgg gcattgccgg
     3001 aatcgaaggg catttttccc gtatggacac cgtaaccgtg tacagcaagg caaccaaaca
     3061 gcccctgggc aaagggcgcg tcctgttcgg ttctgccgcc gccgaagacc tgctcaaatc
     3121 gcgtaaggcg aaaggcgtgt tcatccatcg ggacgactgg atttccatca cgcccgaaat
     3181 acgcctgctt ctgaccgaat tttagaaaag gaaacccatg tcaaacacac aaaaacagct
     3241 tgcccttgcc aaagcggcaa aaaaatccgt caacacggcg gatacggaag aaaaaaaccg
     3301 cgcgctgctt gctatggcgg acagtctgga agcggcggcg gcagatattt tggcggcaaa
     3361 ccgtcaagac ttggaagccg cggcaggcaa cattcccgaa agcatgaccg accgcctttt
     3421 gttggacgaa aaacgcattg gcgcgatggc ggacggcatc agggcggttg ccgcgctgcc
     3481 cgaccccgtg ggcgaaatac tggaaacctc gactttgccc aacggcttgg aaatcgtcaa
     3541 aaagcgcgtg gcgatgggcg ttatcggcat tatttacgaa agccgcccga acgttacttc
     3601 cgatgcggcg gctttggcac tgaaaagcgg cagcgcggtc gtactccgca gcggcaaaga
     3661 tgcattccaa tccgcacgcg ccatcgttgc cgcactcaaa gccggtttgg cgcaaacccg
     3721 catcgacccc gacgcgctcc agttgattga agacacaggg cgtgagggca gttacgaaat
     3781 gatgagggcg aaagattatc tagacctgct gattccgcgc ggcggggcgg ggctgatacg
     3841 ggcggtggtt gaaaatgccg tcgtgccggt cattgaaacg ggaacgggca ttgtccacat
     3901 ttatatcgac aaggacgcgg attgggacaa ggcgctccgt atcgtgtaca acgccaaaac
     3961 cagccgtccg tccgtgtgca actcgatgga agtgctgctg gtacatgaag acattgctgc
     4021 cgacttcctg cccaagctcg aacggctgtt ggttcgcgac cgcatagaag ccggactgcc
     4081 gcccgtccgc ttccgtttgg atccgcaggc ggcgcggcat atcggcggcg aagcggcggg
     4141 tgcagacgat ttcgataccg agtttttaga ctacatcctc gctgtgaaaa ccgtcgcttc
     4201 ggtcgaagag gcggtctggc acatcgaaac ccacagcaca caccattcag acggcatcgt
     4261 taccgaaaac cgccacgctg cggactattt cacgactcat atcgattctg ccgccgtgta
     4321 tgtcaacgcg tccacgcgct ttaccgacgg cggcgaattc ggcttgggtt gcgaaatggg
     4381 catctccacg caaaaactcc acgcccgggg cccgatgggt ttgaaagagc tgacgagtta
     4441 caaatacatc gtacaaggca cgggacaggt cagggaataa tccgaattca aatgtctgat
     4501 atagtggatt aactttaaac cggtacggcg ttgcctcgcc ttagctcaaa gagaacgatt
     4561 ctctaaggtg ctga
//
LOCUS       DAWKJW010000148         4490 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.148, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000148 DAWKJW010000000
VERSION     DAWKJW010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4490)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4490)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4490
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.148"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(148..1191)
                     /locus_tag="WJJ54_001636"
     CDS             complement(148..1191)
                     /locus_tag="WJJ54_001636"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEZ7342478.1"
                     /translation="MSKKIKVGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTA
                     VADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSA
                     DFRIWDIPTWEHWYGMTHAAPGLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLP
                     LVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEVGDNFKAYGIAGHRHLPEI
                     RQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSDGICPETILRDYYRDSLFVDI
                     LPAGSTPETRSVRGANLCRISIQQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGL
                     KETHGLGAIPLLP"
     gene            complement(1188..1469)
                     /locus_tag="WJJ54_001637"
     CDS             complement(1188..1469)
                     /locus_tag="WJJ54_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342479.1"
                     /translation="MKTLVLLLLSFSTTTAFAAYGLGLGQAPKYPAGFRAYGYVYSGR
                     QGWVLKTEADAIKLDTLFKRFVYRPSAANQNPVGQRSDGIPANHTKEKP"
     gene            1723..2877
                     /locus_tag="WJJ54_001638"
     CDS             1723..2877
                     /locus_tag="WJJ54_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ7342480.1"
                     /translation="MSIHLDFGISPKTFRQTYLYQKPKLFKGAVRNLESASWKDINEI
                     YQRADPTAPLFHLRKKGAIVPKEEYVESFDDLGKTRYRFIKSVIYEHMKNGASLVYNH
                     INNEPFSDHIARQVARFAGAHTIVSGYLAFGSDESYKNHWDIRDVYAIQLFGKKRWQL
                     TAPDFPMPLYMQQTKDTDISIPEHIDMDIILEAGDVLYIPRGWWHRPIPLGCETFHLA
                     VGTFPPNGYNYLEWLMKKFPTIESLRHSFSDWEQDRTRINDTAAQIAAMIADPVNYEA
                     FSEDFLGKERTDTAFHLEQFANPNATLLSDDVRLRLNANNLDTLEKGYLIGNGMKISV
                     DELGKKVLEHIGKNEPLLLKNLLVNFNQGKHEEVRKLIYQLIELDFLELL"
     gene            3106..3459
                     /locus_tag="WJJ54_001639"
     CDS             3106..3459
                     /locus_tag="WJJ54_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342481.1"
                     /translation="MIELQLHELKLVSGGGPVTDNIAGNVANVATTKGGPTWGDLVAI
                     PAAAAAVYYLPKNAYGAAGANGVYNVTRNWVNDAVNAPPYNGRPIFEIEHGLTAPATK
                     ADKSGNGYTDGTDYC"
     gene            3520..4146
                     /locus_tag="WJJ54_001640"
                     /pseudo
     CDS             3520..4146
                     /locus_tag="WJJ54_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246842.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein"
     gene            4098..4298
                     /locus_tag="WJJ54_001641"
     CDS             4098..4298
                     /locus_tag="WJJ54_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342482.1"
                     /translation="MVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADI
                     LHEKRRLYEWVLEPIYSISGKL"
BASE COUNT         1218 a         1011 c         1145 g         1116 t
ORIGIN      
        1 attcccgctt ttgcgggaat gacggtattt tagatttttg ttttcgcgga ataatgagcc
       61 aaaagccgtc cgaacccaaa aaaaccgtcg ctttcagacg gcatcaaaaa accgcaggca
      121 cgatgcctgc ggtttgccgt ttgcgcttca ggggagcagg gggattgcgc ccaagccgtg
      181 tgtttccttc agtccgaaca tgatgttcat attttgcacc gcctgacccg ccgcgccttt
      241 gacgaggttg tcgatgacgg aaaggacgac ccacacatcg gattgcgccg cctgttggat
      301 gctgatgcgg cagaggtttg cgccgcgcac gctgcgggtt tcgggtgtcg aaccggcggg
      361 caggatgtcc acgaacaggc tgtcgcggta atagtcgcgc aggatggttt cggggcagat
      421 gccgtctgaa aggtggaggt aaacggtggc gtgcataccg cgtatcatcg gcgcgaggtg
      481 cggcgtgaac acgaatcctt cggcgatgcc gtcctgaagc ccggcgatgg tctgcctgat
      541 ttcgggcagg tggcggtgtc cagctatgcc gtaggctttg aagttgtcgc cgacttcgca
      601 caacagcgaa ccgacattgc ctttcctgcc cgcgccggac acgccggatt tgcagtcggc
      661 aatcagcggc ataccgggct tcagacggca ttgccgcaac agcggcacga gcggcaggga
      721 tacgcaggtc gggtagcagc cggggttggc gacgaggcgc gcctgtgcga cggcttcgcg
      781 gttgagttcg ctcaatccgt acacggcttg ggaaacgagg ccgggggcgg cgtgggtcat
      841 gccgtaccag tgttcccagg tcggaatgtc ccatatgcgg aagtcggcgg aaaggtcgat
      901 gacgcgcacg ccctgttcaa tcaggcgcgg cgcgtctttc atggcgatgc cgttgggcgt
      961 ggcgaagaag acgatgtcgc attgttccaa acctgcctcg tcgggcgttt ggaaggcgag
     1021 gccgtacacg ccgcgcaaac tcggaaagta atcggcaact gcggttcccg cttcgctgcg
     1081 gctggttacg gcggcgactt cgacatcggg atgggcggca agcaggcgca gcagttccac
     1141 gccggtgtag cccgtcgcgc cgacaatgcc gactttgatt tttttactca tggtttttcc
     1201 tttgtgtggt tggcgggtat gccgtccgaa cgctgtccga cggggttttg attggcggcg
     1261 gaaggacggt acacaaagcg tttgaaaagc gtgtctaatt taatggcatc cgcctctgtt
     1321 tttaaaaccc agccctgccg tccggaataa acataaccgt aggcgcgaaa gccggcagga
     1381 tatttcggtg cctgccccaa acccaaaccg tatgcggcga aagcggtggt cgtggagaag
     1441 gaaagcagga ggaggacgag ggttttcata aggttccaaa ccgaacgggg cgatgaagcc
     1501 cgattatagc aaaaggtcgt ctgaaaaccg ttttcagacg accttttatt taattacaat
     1561 aaaaatgtta acaacaaaaa acaaaccgct tttttccgtt tggagacaaa tttttaacta
     1621 aaattgtcaa caattccttg acgcgcacac aaaaaaaact ttaatatttg taaatatatg
     1681 taacattata aattttaaat attttctgag taaggggaag taatgagcat ccatctcgac
     1741 ttcggcatta gtcctaaaac gttccgacag acttatctgt atcaaaagcc caagctcttt
     1801 aaaggagcgg ttcggaatct cgaatccgca tcttggaaag atatcaacga gatataccaa
     1861 cgagcagacc caaccgcacc gctgtttcat ctgcgtaaaa aaggcgcaat cgttcctaaa
     1921 gaagaatacg tcgaaagttt cgacgatttg ggcaaaactc gctaccgttt tattaaatcc
     1981 gttatctacg aacatatgaa gaatggtgcg tcgttagtct ataaccatat taacaacgag
     2041 ccgttttcag accatatcgc ccgtcaagtc gcccgctttg ccggcgcaca tactattgtt
     2101 agtggatatc ttgcttttgg cagcgacgaa tcttataaaa accattggga catccgagat
     2161 gtgtatgcca tccagctttt cggcaagaaa cgttggcaac ttactgcccc tgatttccct
     2221 atgccattgt atatgcaaca gactaaagat actgatattt ccattcctga acatatcgat
     2281 atggatatta tccttgaagc aggtgatgtc ctctacatcc cgcgcggttg gtggcacaga
     2341 cctatcccgc tcggctgtga aaccttccac ctcgctgtcg gtacctttcc gcccaacggc
     2401 tataattacc tcgagtggct aatgaagaaa ttccccacga tagaaagtct gcgccacagt
     2461 ttctcagact gggagcaaga taggacgcgt atcaacgata ctgccgcaca aattgctgcc
     2521 atgattgccg accccgtcaa ttacgaagcc ttcagtgaag acttcctcgg caaagaacgt
     2581 accgataccg cttttcatct cgaacagttc gcgaatccca acgctactct gctttcagac
     2641 gacgtcaggt tgagactaaa tgccaataat ttggatacgt tggaaaaggg gtatttgatt
     2701 gggaatggga tgaagataag cgtagatgaa ttggggaaaa aagttttaga acacatcggt
     2761 aagaatgaac cgttattgtt gaaaaatcta ctggttaact tcaatcaggg aaaacatgaa
     2821 gaagttagga agttgattta tcagttgata gagttagatt ttctggaact tttgtgaggg
     2881 attctatgaa aaactggaag caatttacat ttttcgtaat attagtaata gcttgttatc
     2941 aattgctata ttttttatca gatatgtttc ttctcgacta cattaacaaa tatagttgga
     3001 atttgaattt tattcagggt actttgaatt ttttttcaat atatctgcca tatgtttttg
     3061 ttagccgaat ttttaggaat actaaccaag aaaaggagta taaaaatgat tgaacttcaa
     3121 cttcatgaat tgaagctggt ttcaggggga ggtcctgtaa cagacaatat agctggaaat
     3181 gtagctaatg ttgccacaac caaaggaggt cccacatggg gggatttggt tgcaatacct
     3241 gctgccgcag cggcagttta ttatctgccg aaaaatgctt acggtgctgc tggtgcaaat
     3301 ggtgtataca atgtgactcg taattgggta aatgatgccg ttaatgcacc tccttataac
     3361 ggaagaccaa tctttgagat tgaacatgga ttaactgctc ccgcaacaaa agcagataaa
     3421 tcaggaaacg gctacactga cggtacagat tactgctgat atttctcatt gttcagacga
     3481 tctctagggg tcgtctgaaa ctttcttaac ttcaatttta tgaatagacc caagcaaccc
     3541 ttcttccgtc ccgaagtcgc cgttgcccgc caaaccagcc tgacgggtaa agtgattctg
     3601 acacgaccgt tgtcattttc cctatggacg acatttgcat cgatatctgc gttattgatt
     3661 atcctgtttt tgatatttgg taactatacg cgaaagacaa cagcggaggg acaaatttta
     3721 cctgcatcag gcgtaatcag ggtgtatgca ccggatacgg ggacaattac agcgaaattc
     3781 gtggaagatg gagaaaaggt taaggctggc gacaagctat ttgcgctttc gacctcacgt
     3841 ttcggcgcag gaggtagcgt gcagcagcag ttgaaaacgg aggcagtttt gaagaaaacg
     3901 ttggcagaac aggaactggg tcgtctgaag ctgatacacg ggaatgaaac gcgcagcctt
     3961 aaagcaactg tcgaacgttt ggaaaaccag aaactccata tttcgcaaca gatagacggt
     4021 cagaaaaggc gcattagact tgcggaagat cagtagcaaa aacggcactg ggcagacagg
     4081 aattgtcggg attgggcatg gtatcctccg atttggcgaa gagcaacgaa cctgtttatc
     4141 ttgtgaaaat aaaacccgac aaaccaacca tcactgcata cggtgaggaa aaaccgctgc
     4201 aaatcggcat gacgttggaa gcagacatcc tgcacgagaa acggcgattg tatgaatggg
     4261 tattggagcc gatttatagt atatcgggca aactgtaaga cttgaggctg aaagataaag
     4321 aagttgtctg aaaccttttc agacgaccag aagacaatat ataaaaacac aaacttcaaa
     4381 actgcctgaa accatcctct tttacaggca ctccgtctgt aaaagcaagg atagggcatc
     4441 tgcccttttg attgtttgat taacgataca aggagtttca aaatgagagt
//
LOCUS       DAWKJW010000149         4482 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.149, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000149 DAWKJW010000000
VERSION     DAWKJW010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4482)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4482)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4482
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.149"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            231..1151
                     /gene="ribF"
                     /locus_tag="WJJ54_001642"
     CDS             231..1151
                     /gene="ribF"
                     /locus_tag="WJJ54_001642"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEZ7342483.1"
                     /translation="MKIRLGRHNAPDFPQGAAVTIGNFDGVHLGHKHILQKLRLEADA
                     RGLPVVAVIFEPQPKEFFASRTGKTPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNF
                     SEISAQGFIDRLLRQTLNTRYLLVGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVE
                     DIRTSSTAVRQALSDGNLAYAKKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHR
                     YALGGVFVVEADGAFGTRRGVASFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRF
                     LHKLRDEEKFDGMAELKRQIAADMEAAKCW"
     gene            1293..4085
                     /gene="ileS"
                     /locus_tag="WJJ54_001643"
     CDS             1293..4085
                     /gene="ileS"
                     /locus_tag="WJJ54_001643"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEZ7342484.1"
                     /translation="MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLREI
                     AKGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI
                     EVMVEKLHGKDMPKARFRELCREYAAEQVARQKKDFIRLGVLGDWDHPYLTMDFKTEA
                     DTVRMLGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKDTAA
                     LAAAFGLAGIEGKAFAVIWTTTPWTLPASQAVSAGADVVYQLIDTPKGKLVLAKDLAE
                     DALKRYGFVSDDLSVLAETTGDKLENLHMNHPFLKRDIPMLNGEHVTTDAGTGLVHTA
                     PAHGLEDYAVCNKYGIELYNPVNAEGKYIGETPRVAGMRVWEANPVILQWLEETGNLL
                     ASSKIEHSYAHCWRHKTPLIYRATGQWFVGMDKAGADGKTLRDKAIKAVDDTEFFPSW
                     GRARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAELLEKVALKIEEKGI
                     EAWFSLDKSELLSAEDCEHYDKLPDTMDVWFDSGSTHYSVVKQREKLEWPADLYLEGS
                     DQHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEF
                     GADILRLWAASTDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQ
                     ADMVEIDRYAVVLARQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRL
                     YTTKADSHARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHE
                     FPTINEKTEAELVKKWTAIREAREAVTAAIEPLRADKTVGSSLQAEAEITAPEEMAGY
                     LNALGEELRFALLVSKAEVKVGSELAVAAKASDGEKCERCWHYTRDVGAVAGYETVCK
                     RCAENVGGEGETRHYA"
BASE COUNT         1097 a         1228 c         1187 g          970 t
ORIGIN      
        1 tttacctggt taaaaaagaa cgattttcac tgatgttgca tcaggtttgg ggcgatgttt
       61 caacacatag caccgcgcct gctgcgcgtt tttgtgcgtt tggcgcgttc ggcggcggga
      121 aatttgccta cttttcccgc gtcgggcggg cgtaacgggc ggcacactgt ctataaaccg
      181 caataccgtt tacaatgacc gcctgtttca ccacataccc gaacgcaaca atgaaaatca
      241 ggctggggcg gcacaacgcg cccgactttc cacagggtgc cgccgtaacc ataggcaatt
      301 tcgacggcgt acacctcgga cacaaacaca tcctccaaaa actccgcctc gaagccgacg
      361 cgcgcggact gcccgtcgtt gccgtcatct tcgaacctca acccaaagaa ttttttgcaa
      421 gccgcacagg caaaaccccg ccctgccgca tcagccccct gcgtaccaaa ctggaattgc
      481 tggaagggac gggctgcgtc gatgccgtct gggttttacg tttcgatcaa aatttttccg
      541 aaatatccgc gcaagggttt atcgaccgcc tgctgcgtca aaccttgaat acgcgttatt
      601 tgctcgtcgg cgacgatttc cgtttcggtg cggggcggga aggctgtttt gaacttttgg
      661 cacaacagcc cgatatgcag accgagcgta cgccttccgt catcgtcgaa gacatccgca
      721 ccagcagtac cgccgtgcga caagcccttt cagacggcaa ccttgcctat gcgaaaaaac
      781 ttttgggaca cgactacgtc ttgagcggca gggtggtgca cggcagaaaa ctcggacgca
      841 ccctaaatgc cccgactgcc aacatccgcc tgccccgcca ccgttatgca ctcggcggcg
      901 tgttcgtcgt cgaagcggac ggcgcattcg gcacgcggcg cggcgtggcg agcttcggtt
      961 tcaatcccac cgttgatagc ggctgttctc aaaagcttga agtccacctg ttcgactttc
     1021 aaggcgacct gtacggacaa cggctgaacg tccgcttcct gcacaaactg cgcgatgaag
     1081 aaaagtttga cggtatggca gaactgaaaa ggcagatagc agccgatatg gaagccgcaa
     1141 agtgttggta gaaaaacctt atacaaacca tccgattggg ctacaatcaa tcttttaact
     1201 tttcagacgg cataggggtt tcccgttgtg aaatactgtt tgaggcgcaa tgccgtctga
     1261 aaccgaaata ttgtaacaat agagattaaa aaatgaccga ttacagtaaa accgtaaacc
     1321 tgctcgagag cccgtttccg atgcgcggca accttgccaa gcgcgagcct gcatggctga
     1381 aaagctggta cgagcaaaaa cgctaccaaa aactgcgcga aatcgccaaa ggccgtccga
     1441 aatttattct gcacgacggc cctccgtatg ccaacggcga catccacatc ggtcatgccg
     1501 tcaataaaat tctcaaagac atcattatcc gcagcaaaac ccaagccggt tttgacgcgc
     1561 cttatgtgcc gggttgggac tgccacggtt tgcctatcga agtgatggtg gaaaaactgc
     1621 acggcaaaga tatgcccaaa gcccgtttcc gcgaattgtg ccgcgaatat gccgccgaac
     1681 aggttgcccg ccagaaaaaa gactttatcc gcttgggcgt gttgggcgac tgggaccatc
     1741 cttacctgac catggatttc aaaacagaag ccgataccgt gcgtatgctc ggcgaaatct
     1801 acaaatcggg ctatctctac cggggcgcga aaccggttca attctgcttg gactgcggtt
     1861 cttcattggc cgaagcggaa gtggaataca aagacaaagt atcgcctgcg attgacgttg
     1921 cctatccgtt taaagacacc gccgcgcttg ccgccgcatt cggtttggca ggtatcgaag
     1981 gcaaagcgtt tgccgttatt tggacaacca cgccttggac tttgcctgcg agccaagctg
     2041 tttcagcggg tgcagacgtg gtgtatcaat taatcgatac gcccaaaggc aaattggtat
     2101 tggcgaaaga tttggcggaa gatgcgctca aacgctacgg cttcgtttca gacgacctca
     2161 gcgtcctcgc ggaaaccacc ggcgacaagc tggaaaacct gcacatgaac catccgttcc
     2221 tcaaacgcga tattcccatg cttaacggcg aacacgttac caccgatgcc ggtaccggct
     2281 tggtgcatac tgcgcccgcg cacggtttgg aagactacgc cgtctgcaac aaatacggca
     2341 tcgagcttta caatcctgtc aacgccgaag gcaaatacat cggcgaaacg ccgcgcgttg
     2401 ccggtatgcg cgtttgggag gcgaaccccg tcatcctgca atggttggaa gaaaccggca
     2461 accttttggc aagcagtaaa atcgaacaca gctacgccca ctgctggcgg cacaaaacgc
     2521 cgctgattta ccgcgcgaca ggtcaatggt ttgtcggtat ggacaaagct ggtgccgacg
     2581 gcaaaaccct gcgcgacaaa gccatcaagg ccgtggacga caccgaattc ttcccgtctt
     2641 ggggtcgcgc gcgtttggaa gccatgattg aaggtcgtcc tgactgggtg gtttcacgcc
     2701 aacgctattg gggcacgccg atgactttct ttgttcacaa agaaacgggc gagctgcatc
     2761 cgaactctgc cgaacttttg gaaaaagttg ccctgaaaat cgaagaaaaa ggcatcgaag
     2821 cgtggttctc cctcgataag agcgaactct tgagcgcgga agattgcgaa cattacgaca
     2881 aactccccga tacgatggac gtatggttcg actccggctc gacccattat tccgttgtga
     2941 aacaacgcga aaaattggaa tggccggctg atttgtatct cgaaggcagc gaccaacacc
     3001 gcggctggtt tcaatcgtcc atgctgaccg gctgcgcctc atcaatgggt cgcgcgccgt
     3061 ataaacagct gctgacccat ggtttcgttg tcgacggcga aggcaaaaaa atgtcgaaat
     3121 ccatcggcaa cgtcgttgca ccgcaagagg tttataacga attcggcgca gacatcctgc
     3181 gcctgtgggc ggcatctacc gattacagcg gcgaattggc gatttccaaa gaaatcctca
     3241 aacgcgtaac cgaaagctac cgccgtatcc gcaatacctt gagctttttg tttgccaact
     3301 tgagcgactt taatccgatt gaagatgccg tgcaacaggc ggatatggtg gaaatcgacc
     3361 gctacgccgt ggtattggca cgtcagctgc aagagcgtct ggcaggcgat tactatccgc
     3421 gttatgcctt ccactttgcc gtaaaagaca ttgtttcttt ctgctcggaa gacttgggtg
     3481 cgttctacct cgacatcctg aaagaccgcc tctacaccac caaagccgac agccatgcac
     3541 gccgtagcgc acaaactgcc ctgtatcaca tcacacgcag tttggttctc ttgattgcac
     3601 cgattttgtg cttcaccggc gaagaagcgt gggacatcat cggcggcggc gaagaagaca
     3661 gcgtcctctt ccatacttgg cacgagttcc cgaccatcaa cgaaaaaacc gaagccgaac
     3721 tggtgaaaaa atggacggca atccgcgaag cccgcgaagc ggtaaccgcc gccatcgagc
     3781 ctttgcgcgc cgacaaaacc gtcggttcgt ccttgcaagc cgaagccgaa attaccgcgc
     3841 cggaagaaat ggccggctat ctgaatgctt tgggcgaaga attgcgcttt gctttgctgg
     3901 tgtctaaagc agaagtgaaa gtaggcagcg aacttgccgt tgccgctaaa gccagtgatg
     3961 gtgaaaaatg cgaacgctgc tggcactaca cccgcgatgt gggcgcggtt gcaggctatg
     4021 aaaccgtctg caaacgctgt gcagagaatg tcggcgggga aggcgaaacg cgccattacg
     4081 cctgataaag tttgagcaaa tgccgtctga aaccgccaaa cagcatttca gacggcattt
     4141 tttgtgccgc aatttgtctt tataacggcg gaggggtttc aagattgcgg tgttgtcgga
     4201 atgcaactga accgtcattc ccacgaaagt gggaatctag aatctcgagg tttcagtcat
     4261 ttccgataga ttcccgccgc gtcgtgggtc cggattcccg cctgtgcggg aatgacggat
     4321 ttcgagattg cggtgttgtc ggaacgcaac tgaaccgtca ttcccacgaa agtgggaatc
     4381 tagaatctcg aggtttcagt catttccgat agattcccgc cgcgtcaggg gtctggattc
     4441 ccgcctgtgt gggaatgacg gatttcgaga ttgcggtgtt gt
//
LOCUS       DAWKJW010000150         4477 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.150, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000150 DAWKJW010000000
VERSION     DAWKJW010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4477
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.150"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(44..3094)
                     /locus_tag="WJJ54_001644"
     CDS             complement(44..3094)
                     /locus_tag="WJJ54_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsK"
                     /protein_id="HEZ7342485.1"
                     /translation="MFWIVMIVILLLALAGLFFVRAQSEREWMREVSAWQEKKGEKQA
                     ELPEIKDGMPDFPELALMLFHAVKTAVYWLFVGVVRFCRNYLDLAHESEPDRPVPPAS
                     ANRADVPTASDGYSDSGNGTEEAETEAAEAAEEEAADTEDIATAVIDNRRIPFDRSIA
                     EGLMPSESEISPVRPVFKEITLEEATRALNSAALRETKKRYIDAFEKNETAVPKVRVS
                     DTPMEGLQIIGLDDPVLQRTYSRMFDADKEAFSESADYGFEPYFEKQHPSAFSAVKAE
                     NARNAPFHRHAGQGKGQAEAKSPDVSQGQSVSDGTAVRDARRRVSVNLKEPNKATVSA
                     EARISRLIPESQTVVGKRDVEMPSETENVFTETVSSVGYGGPVYDETADIHIEEPAAP
                     DAWVVEPPEVPKVPMTAIDIQPPPPVSEIYNRTYEPPSGFEQVQRSRIAETDHLADDV
                     LNGGWQEETAAIADDGSEGAAERSSGQYLSETEAFGHDSQAVCPFENVPSERPSCRVS
                     DTEADEGAFPSEETGAVSEHLPTTDLLLPPLFNPEATQTEEELLENSITIEEKLAEFK
                     VKVKVVDSYSGPVITRYEIEPDVGVRGNSVLNLEKDLARSLGVASIRVVETIPGKTCM
                     GLELPNPKRQMIRLSEIFNSPEFAESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGT
                     TGSGKSVGVNAMILSMLFKAAPEDVRMIMIDPKMLELSIYEGIPHLLAPVVTDMKLAA
                     NALNWCVNEMEKRYRLMSFMGVRNLAGFNQKIAEAAARGEKIGNPFSLTPDDPEPLEK
                     LPFIVVVVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKA
                     NIPTRIAFQVSSKIDSRTILDQMGAENLLGQGDMLFLLPGTAYPQRVHGAFASDEEVH
                     RVVEYLKQFGEPDYVDDILSGGGSEELPGIGRSGDDETDPMYDEAVSVVLKTRKASIS
                     GVQRALRIGYNRAARLIDQMEAEGIVSAPEHNGNRTILVPLDNA"
     gene            3259..3939
                     /locus_tag="WJJ54_001645"
     CDS             3259..3939
                     /locus_tag="WJJ54_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter permease"
                     /protein_id="HEZ7342486.1"
                     /translation="MIFQTVWFSDMVLSVSWIVLILILAASAPSAFRSLARYRSALPL
                     CTVIFSAAWCLNASAGGGQLAQMNYHLLAVNLVALMVGTSAAFWLAALLMLPYCLLFA
                     DSAGAYPPNALVLILPALVVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
                     TGILDAANAFPSEILWTTALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYL
                     KSDRGIWR"
     gene            3968..4327
                     /locus_tag="WJJ54_001646"
     CDS             3968..4327
                     /locus_tag="WJJ54_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEZ7342487.1"
                     /translation="MLSNIIPLSIGAALGATARWLLNLAVPASIPPATGNLFANWTGA
                     LLIGIFAETVNHPQWKLLLITGFLGSLTTLSGFSLETVTLLQLNRPASALSNIFLHTA
                     GSLLLTWLGLKIGAAVK"
BASE COUNT          916 a         1309 c         1130 g         1122 t
ORIGIN      
        1 ccgtctgaaa cagtcttcag acggcatttc catttgcaaa aaatcaagca ttgtccaagg
       61 ggacgagaat cgtacggttg ccgttgtgtt ccggtgcgga cacaatgcct tccgcctcca
      121 tctggtcaat cagacgcgcg gcgcggttgt agccgatacg caaggcgcgc tgtacgcccg
      181 aaatgctggc tttgcgcgtt ttcaggacaa cggatacggc ctcgtcgtac atcggatcgg
      241 tttcgtcgtc gccgctgcgc ccgatgccgg gcagctcttc gctgccgccg ccgctcaaaa
      301 tatcgtcaac atagtccggt tcgccaaact gtttcaaata ttcgaccacg cggtgcacct
      361 cttcatccga ggcaaacgcg ccgtgaacgc gctgcggata ggcagtaccc ggcagcagga
      421 acagcatatc gccctgaccg agcaggtttt ccgcgcccat ttggtcgaga atcgtgcggc
      481 tgtcgatttt gctggacact tggaacgcga tacgcgtcgg gatgttcgcc ttaatcagac
      541 ccgtgatgac atcgacgctg gggcgttgtg tggcaagaat caaatggatg cctgccgcgc
      601 gggctttttg ggcgaggcgg gcaatcagtt cttcgatttt cttgcctgcc gtcatcatca
      661 ggtcggcaaa ctcatcgacc acgaccacga taaacggcag tttttccaaa ggttcgggat
      721 cgtcgggcgt gaggctgaac ggattgccga ttttttctcc ccttgctgcg gcttcggcga
      781 ttttttgatt gaagcccgca agattacgca cgcccataaa gctcatcagg cggtagcgtt
      841 tttccatttc gttaacacac cagttcagcg cgtttgccgc cagcttcata tcggtaacga
      901 caggggcgag caggtgcggg atgccttcgt aaatgctcaa ttccagcatt ttcggatcga
      961 tcataatcat acgcacgtct tccggcgcgg ctttgaaaag catagacaga atcatcgcgt
     1021 tgacacccac cgatttgccc gaaccggtcg tgccggcaac cagcaaatgc ggtgctttgc
     1081 ccaagtcggt tacaacgggc tgtccggtga tgtcctgacc gagcgcgagc gtcagcttgg
     1141 atttggattc ggcaaactcg ggcgaattga agatttcgct caggcgtatc atttgacgtt
     1201 tcgggttcgg aagttccaaa cccatgcagg ttttgccggg gatggtttcg acaacgcgga
     1261 tggaagccac gccgagcgaa cgcgccaaat ctttttccag attcagaacg gaattgccgc
     1321 gcacgccgac atcgggttcg atttcataac gcgtaattac ggggccggaa taagaatcga
     1381 caaccttgac cttgactttg aactccgcca atttttcttc gatggtgatg ctgttttcca
     1441 acagttcttc ttcggtttgc gtcgcctcgg gattgaacag cggcggcaga agcaggtcgg
     1501 ttgtcggcag gtgttcggat accgcaccgg tttcttcaga tgggaacgcc ccttcatccg
     1561 cttccgtatc cgatacccgg caggacgggc gttcagacgg cacattttca aacggacaaa
     1621 ccgcctgact gtcatgcccg aacgcttcgg tttccgacag atattgcccg cttgaccgct
     1681 ctgccgcacc ttcactgccg tcatccgcaa tagcggcggt ttcctcctgc caacctccat
     1741 tcaaaacatc atcggcaaga tggtcggtct cggcaatgcg gctgcgttgc acctgctcga
     1801 atcctgacgg cggttcatag gtacggttgt agatttccga tacgggaggc ggcggctgaa
     1861 tatcgattgc ggtcatggga actttcggca cttcgggtgg ttcgaccacc caagcatcgg
     1921 gcgcggcagg ttcttcaata tggatatcgg cagtttcatc ataaaccgga ccgccgtatc
     1981 ccacagacga aacggtttcc gtgaaaacat tttcggtttc agacggcatt tcgacatccc
     2041 gtttcccgac aaccgtctga ctttccggaa tcaggcgaga aattcgcgcc tccgcagaaa
     2101 ccgttgcctt gttcggttct ttcaaattga cggaaacgcg gcggcgggca tcgcggacgg
     2161 ccgtgccgtc tgaaacggac tgcccttggg aaacatccgg ggattttgcc tccgcctgcc
     2221 ctttcccctg ccctgcatga cggtggaacg gcgcattccg tgcattttcg gctttgaccg
     2281 cagaaaaggc agacggatgc tgcttctcaa aatacggttc aaatccgtaa tccgcagact
     2341 cggaaaacgc ttctttgtcc gcatcgaaca tacgggaata cgtgcgttga agcacagggt
     2401 cgtccaaacc gataatctgc agcccttcca tcggggtatc ggacacgcgg actttgggga
     2461 ccgctgtttc gtttttctca aatgcatcga tatagcgttt tttcgtttcc cttaaagccg
     2521 cgctgtttaa agcacgcgtt gcttcttcca aagtgatttc tttaaaaacc ggacggacgg
     2581 gcgaaatttc gctttcagac ggcatcaacc cttcagcaat actccggtcg aatgggatgc
     2641 ggcggttgtc gattacggca gttgcaatgt cttccgtatc ggcagcctct tcctccgcag
     2701 cttctgctgc ttccgtttcc gcttcttccg tcccgtttcc actgtctgaa tatccgtcgg
     2761 atgcggtcgg aacatccgca cgatttgcag aagcaggcgg aacgggcctg tccggttcgg
     2821 attcgtgcgc cagatccaga tagtttcggc agaaacggac gacaccgaca aacagccaat
     2881 acactgccgt tttgacggca tggaaaagca tcagggcaag ttcgggaaaa tcgggcatac
     2941 cgtctttgat ttcaggcagc tccgcctgtt tttccccttt cttttcctgc cacgcagaaa
     3001 cctcgcgcat ccactcgcgt tcggattgtg cgcggacaaa aaacaagccg gcaagcgcaa
     3061 gcaacaaaat aacgatcata actatccaaa acatatgccg tttcccgcaa gacaaacgat
     3121 taaacgggtt tattttaacg tgtttccatc ccaaaaaaaa caaccggtcg gcaattctgc
     3181 cgaaaccgat tcggctttcg gtttgccccc gccgacagta taatagccgt cctttccctt
     3241 aatctttgcg gcattgccat gattttccaa acagtctggt tttcagatat ggtactgtcg
     3301 gtttcgtgga ttgtccttat cctgatactg gcagcttccg cgccgtccgc attccgctcg
     3361 cttgcccgct accgttccgc ccttcccctg tgtaccgtaa ttttttccgc agcatggtgt
     3421 ctgaacgcct ctgccggcgg cggacagctt gcccagatga actaccacct gctcgccgtc
     3481 aatctggttg cactgatggt gggcacttcc gccgcctttt ggcttgccgc gctgctgatg
     3541 ctgccctact gcctgctgtt tgccgattct gccggcgcat atccgccgaa cgctttggtg
     3601 ctgattctgc ccgcgctggt cgtcaaccgc ctgtcgcgta tgctggtcaa ccgcctgccg
     3661 cccaatattt tcatctttat tttcgtcaac ggctttctcg cttccgccgc cggcattctg
     3721 ttgaccgggc tggtgctgac cggtattttg gatgctgcaa acgcttttcc gtccgaaata
     3781 ttgtggacga ccgccctgcc cgtctttatt ctgctggcgt gggcggaagc cttcctcagc
     3841 ggcatttcaa ctgccatatt tgttgcactg aagccccatt ggattaacac tttcgacgac
     3901 aaccgctatc ttaagtccga ccgcggcata tggcggtagc cttcagacgg catagacagg
     3961 caaaaccatg ctttccaaca tcatccccct ttccatcggt gcggcactcg gtgcaacggc
     4021 gcgttggctg ctcaacctcg ccgttcccgc atcaatacct cccgccacag gcaacctgtt
     4081 tgccaactgg acgggcgcgc tgctcatcgg catctttgcc gaaaccgtca accacccaca
     4141 atggaagctg ctgctgatca ccggttttct cggcagcctg accacgcttt ccggattttc
     4201 tctggaaacc gtaaccctgc tccaattgaa ccgtcccgct tcagcacttt ccaatatttt
     4261 cctacacacg gcaggttcgc tgctgctgac ttggctcggg ctgaagatag gggcggcagt
     4321 caaataatcg caaaaaattg cttcctttgg ttttgacaca aactatacaa gtcctaacat
     4381 cttaatcatg gcgcagcata taagcgtgga tttgcagccc aatctatact ttctgattct
     4441 attcattaag ccattatgct tattcctcaa tcacggt
//
LOCUS       DAWKJW010000151         4474 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.151, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000151 DAWKJW010000000
VERSION     DAWKJW010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4474)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4474)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4474
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.151"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(92..1234)
                     /locus_tag="WJJ54_001647"
     CDS             complement(92..1234)
                     /locus_tag="WJJ54_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HEZ7342488.1"
                     /translation="MNTLYTLFATCPRGLETVLSQELESLGCTDVQAFDGGVSCRGGL
                     EQAYAANLHSRTAGRILLRLTKGTYRTERDIYKLAKNINWFNWFTLQQTFKVKVEAKR
                     ANVKSLQFVGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGE
                     ALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAARRA
                     PGMMRRFGFEKLQNFDKTLWADLRRRAEAQTRPVRAPIAGSDNDRRIVQTALDNARSA
                     EVDDIVSFSVADAQSVRPNGENGIMVSNPPYGVRLEEVRVLQALYPQLGTWLKKYYAG
                     WLAAMFTGDREMPKFMRLSPKRKIPLYNGNLDCRLFLIDMVQGSNR"
     gene            complement(1283..1705)
                     /locus_tag="WJJ54_001648"
     CDS             complement(1283..1705)
                     /locus_tag="WJJ54_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342489.1"
                     /translation="MNKNRKLLLAALLLIAFAAVKLVLLQWWQAQQPQAVAAQCDLTE
                     GCTLPDGSRVRAAAVSTKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPS
                     GTWQAVRIRLPICVEGRRDFTADITIGSRTFQTAFTAE"
     gene            complement(1698..2507)
                     /locus_tag="WJJ54_001649"
     CDS             complement(1698..2507)
                     /locus_tag="WJJ54_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEZ7342490.1"
                     /translation="MIQDTRPLIRVVAGILLDSDGNYLLSSRPEGKPYAGYWEFAGGK
                     VEAGETDFQALQREFEEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPGQWTGEPQ
                     SREGQEWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLHGENSMGAYRVLP
                     LGSAEGSGANVLMEAAQWQDRPEHADSVWMMVQTREQWRQAQEKGADVVVWRVCNDVQ
                     AQEAAEALRQGVSVPLVLAANGQTVARYGKLWLGLGAHVVVRDETIGKNHE"
     gene            complement(2589..2966)
                     /locus_tag="WJJ54_001650"
     CDS             complement(2589..2966)
                     /locus_tag="WJJ54_001650"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEZ7342491.1"
                     /translation="MIYGIGTDIVSLKRIIRLNKKFGQAFAGRILTPEELLEFPQAGK
                     PVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDALGKPEFFYGPALSKWLEEQG
                     ISRVSLSMSDEEDTVLAFVIAEK"
     gene            complement(3166..3933)
                     /locus_tag="WJJ54_001651"
     CDS             complement(3166..3933)
                     /locus_tag="WJJ54_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013107841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ7342492.1"
                     /translation="MQEIMQSIVFVAAAILHGITGMGFPMLGTTALAFNMPLSKVVAL
                     VALPSLLMSLLVLCSNNKKGFWQEIVYYLKTYKLLAIGSVVGSILGVKLLLILPVSWL
                     LLLMAIITLYYSVNGILNVCAKAKNIQVVANNKNMILFGFLAGIIGGSTNAMSPILLI
                     FLLSETENKNRIVKSSNLCYLLAKIVQIYMLRDQYWLLNKSEYGLIFLLSVLSVIGLY
                     VGIRLRTKISPNFFKMLIFIVLLVLALKIGHSGLIKL"
     gene            complement(3943..>4474)
                     /locus_tag="WJJ54_001652"
     CDS             complement(3943..>4474)
                     /locus_tag="WJJ54_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEZ7342493.1"
                     /translation="DITFSEDVGECPLHSDSSFSENPESYLVMYVVKSANDGGNSLFL
                     SSSDIVNQLSKTETGKKHLKTLTGNLYPFKAPASFDKKQGVRWGNILSVNTQMIRFRS
                     DCIYKGIEENRNKVSKEMVLALDYLVKIIKNASDIQEFSAQDDGLIIIDNVNGLHAGT
                     DYTDKNRHYIRARITV"
BASE COUNT         1095 a         1117 c         1090 g         1172 t
ORIGIN      
        1 atcctgattt ttgttaatcc actataatat cggccggata ttaaaaaaag ccgtctgaac
       61 atttttcaga cggcattttt gtacactttc ctcaacggtt cgatccctgc accatatcaa
      121 tcaggaacag gcggcaatcg aggttgccgt tataaagcgg aattttgcgt tttggcgaca
      181 ggcgcatgaa tttgggcatt tcccgatctc cggtaaacat tgccgccaac cagcctgcgt
      241 aatatttctt caaccacgtc cccaactgcg gataaagcgc ctgcaagaca cggacttcct
      301 caaggcgcac gccgtagggc ggattggaca ccataatgcc gttttcgccg ttcggtcgga
      361 cggactgcgc gtcggcaacg ctgaaggaaa cgatgtcgtc cacttcggca ctgcgtgcgt
      421 tgtccaatgc cgtctgaacg atgcggcggt cgttgtcgct gcctgcaatc ggggcgcgga
      481 cggggcgggt ttgcgcttcg gcgcggcggc gcaaatccgc ccacagcgtt ttatcgaaat
      541 tttgcagttt ttcaaaaccg aagcggcgca tcatgcccgg cgcgcggcgg gcggcaatcc
      601 aagcggcttc gatagcaatc gtgccgctgc cgcaaaacgg gtcttgaaac ggctgcgtgc
      661 cgtcgtagcc tgccgagagc agcagtccgg cggcaaggtt ttcgcgcagc ggggcttcgc
      721 cggtatccag gcggtagccg cgtttgaaca gggcttcgcc cgaagtgtcg atgaagattt
      781 caacattgcg ttcgtccaaa aaggcgtgga tgcggacatc gggcgcggct ttgtccacgc
      841 tcggacgtgc gtcgtaaatg tcgcggaaag cgtcgcagac ggcatctttg acggtcagtc
      901 cgacaaattg gaggcttttg acgttggcac gctttgcctc gactttgact ttgaacgtct
      961 gctgtaaagt aaaccaatta aaccagttga tgtttttggc aagtttgtag atgtcgcgct
     1021 cggttcggta tgtccctttg gtcagacgca gcaggatacg gccggcggta cgcgagtgca
     1081 ggttggcggc gtaggcctgt tccaatccgc cccggcagga aacgccgccg tcaaacgctt
     1141 gtacatcggt acagccgagg ctttcgagtt cttgcgataa aacggtttcc aagccgcgcg
     1201 ggcaggtggc gaaaagtgta tataaagtat tcatagcgtg tcctttccgg acagatgttc
     1261 cggcaatagc ggattgaaag gtttattcgg cggtaaatgc cgtctgaaat gtccgactgc
     1321 cgattgtaat gtccgccgta aaatcgcgcc tgccttcgac acagatgggc aggcggatgc
     1381 gtactgcctg ccaagtcccc gacggttgcc gctcgaacat atagcggttg aaacccatat
     1441 ccatattttt catactgaag ctgatgctga cctgttccgt gccggcgggc gcgtgttcga
     1501 tataaatatc aaacggtttt ttggttgaaa cggcggcggc gcggacgcgg cttccgtccg
     1561 gcagcgtgca accctcggtc aaatcgcatt gcgccgccac ggcttgcggc tgctgcgcct
     1621 gccaccattg caacaaaacg agcttgacgg cggcaaaggc aatcagcagc agtgcggcaa
     1681 gcagtaattt acggttttta ttcatgattc ttccctattg tttcatccct taccaccacg
     1741 tgcgccccca atccgagcca tagttttcca taacgtgcaa ccgtctgtcc gtttgctgca
     1801 agtacgagcg gcacggatac gccctgccgc agggcttctg ccgcctcttg tgcctgaaca
     1861 tcattgcaca cgcgccacac gacaacatcc gcgccctttt cctgcgcctg ccgccattgt
     1921 tcgcgggtct gcaccatcat ccacacgctg tcggcgtgtt cgggtctgtc ctgccattgc
     1981 gccgcctcca tcaaaacgtt cgcaccgctt ccctctgccg aacccaaagg caggacgcgg
     2041 tacgcgccca tactgttctc cccgtgcaaa cccgttttca ggctgccgta caaacggcgc
     2101 ggaacggaca gcgaacgcaa aagcgcgccg ttggcgggca gcatgggggc aacggtaaaa
     2161 tcacccgcct tctgccaaga ccattcctgc ccttcgcggg attgcggttc gcccgtccat
     2221 tggccggggt tgacccatag gaatttcagg cagacgcggg cgtgttcgta ggaatggatt
     2281 ttggtcagcc aaggcgtggc ggcaaggatg cggatgccga gttcttcttc aaactcgcgt
     2341 tgcaaggctt ggaagtcggt ttcgcccgct tcgaccttgc cgccggcaaa ttcccaatat
     2401 ccggcatagg gtttgccttc ggggcgcgag ctgagcaggt agttgccgtc tgaatcgagc
     2461 aggatgccgg caacgacgcg gataaggggt cgggtgtctt gaatcatggc gggtacgcgg
     2521 ttggtcggtc ggagtgcaaa tgagggacga gcaatgccgt caacgggttt gccgcatttc
     2581 agacggcatt atttttcggc aatgacaaac gccaatacgg tgtcttcttc gtcgctcatg
     2641 ctgaggctga cgcggctgat gccttgttcc tccagccatt tggacagggc ggggccgtag
     2701 aaaaattcgg gcttgcccaa tgcgtcatgc ccgatgccga tgttgcggaa ggaaaccgcg
     2761 ccgcgtatgc ccgtaccgac ggctttggcg aaggcttctt tggcggcaaa gcgtttggcg
     2821 aggtagttga cgggtttgcc cgcttgcgga aattcaagca gctcttctgg agtgaggatg
     2881 cgcccggcaa acgcctgtcc gaattttttg tttaagcgga tgatgcgctt gagggaaaca
     2941 atgtctgtgc cgatgccgta aatcatattt gcgctccttc gcccttggtt gcgggtagtg
     3001 atgaatgtga tgatgaatgc cgtcaatttc ttggggcgtt aaaatggcgt gaatatccac
     3061 ttttggggtt ttgtcggtaa caattttcac tgtaaccttt tgcatttgaa attctaaaac
     3121 atcgtgccaa ttatttaata aggagttaag gcatttaata atgaattaaa gtttgattaa
     3181 acccgaatgc ccgattttca gagccaatac caataaaaca ataaaaatta acattttaaa
     3241 aaaatttggg ctaatcttag tccttaaccg aattccaaca tacaatccaa taacagacaa
     3301 tacggacagt aaaaatatta aaccgtattc actcttattt aataaccaat actggtctct
     3361 tagcatatat atttgaacaa ttttcgccaa aagatagcat agattgcttg attttacgat
     3421 acgattttta ttttctgttt cgctaagcaa aaatattaac aatatgggag acatggcatt
     3481 ggttgaaccg ccgatgatgc ctgccaaaaa cccaaaaaga atcatattct tattattggc
     3541 aactacttga atattttttg cttttgcaca tacatttaaa ataccattaa cagaataata
     3601 caatgtaatg attgccatca gtaaaagcag ccacgacact ggaagtatca aaagcaactt
     3661 cacccccaaa atgctgccaa cgacgctgcc gatagcaagc aatttatagg tttttaaata
     3721 ataaacaatc tcttgccaaa aacctttttt gttattgctg catagaacca acaagctcat
     3781 taacaggctt ggtaatgcca ccaaggcaac aaccttagac aatggcatgt taaaagccaa
     3841 tgcggttgta ccgagcatcg gaaatcccat gcctgtaatt ccgtgcagta ttgcggcagc
     3901 aacaaaaacg atagattgca ttatttcttg cataaccgtc ctttatacag taattcttgc
     3961 tctaatataa tgcctgtttt tatccgtata atcagttccg gcatgcaagc cattgacatt
     4021 gtcaataata atcaaaccat catcttgtgc agaaaattct tgaatatcac tcgcattttt
     4081 tataatcttt acaagataat caagtgcaag taccatttcc tttgatactt tatttctatt
     4141 ttcttcaata cctttataga tacaatcact tctaaatcta atcatttgag tattgaccga
     4201 taagatatta ccccatctca caccttgttt tttatcaaat gatgctggtg ctttaaatgg
     4261 atataaattg cccgttaatg tttttaagtg ttttttaccg gtttctgttt tagataactg
     4321 attgacaata tctgatgaac ttaaaaatag ggaattacct ccatcattgg ctgattttac
     4381 tacatacata accaaataac tttccgggtt ttcactaaaa gatgaatcac tatgaagtgg
     4441 acattctcca acatcttccg agaaagttat atca
//
LOCUS       DAWKJW010000152         4464 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.152, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000152 DAWKJW010000000
VERSION     DAWKJW010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4464
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.152"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            371..1492
                     /gene="dnaJ"
                     /locus_tag="WJJ54_001653"
     CDS             371..1492
                     /gene="dnaJ"
                     /locus_tag="WJJ54_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEZ7342494.1"
                     /translation="MSNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAE
                     EKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGSGQGGFGGFGGFGGAQGFDFGDIFSQ
                     MFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTS
                     PETCPTCKGSGTVHIQQAIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVN
                     IPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAT
                     AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPV
                     NLTDRQKELLEEFERISTGLENQTPRKKSFLDKLRDLFD"
     gene            1687..3705
                     /locus_tag="WJJ54_001654"
     CDS             1687..3705
                     /locus_tag="WJJ54_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEZ7342495.1"
                     /translation="MNKSLSGSVEEYRELTLRGMILGALITVIFTASNVYLGLKVGLT
                     FASSIPAAVISMAVLKFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWSGF
                     PFWQTTLLCIAGGILGVIFTIPLRYAMVVKSELPYPEGVAAAEILKVGGHEEGDNRQG
                     GSGIKELAAGGALAGLMSFCAGGLRVIADSASYWFKSGTAIFQLPMGFSLALLGAGYL
                     VGLTGGIAILLGISIAWGIAVPYFSSHIPQPSDMEMAAFAMKLWKEKVRFIGAGTIGI
                     AAVWTLLMLLKPMVEGMKMSFKSFGGGAPAAERAEQDLSPKAMIFWVLAMMFVLGVSF
                     YHFIGDSHITGGMAWLLVVVCTLLASVIGFLVAAACGYMAGLVGSSSSPISGVGIVSV
                     VVISLVLLLVGESGGLLADEANRKFLLALTLFCGSAVICVASISNDNLQDLKTGYLLK
                     ATPWRQQVALIIGCIVGALVISPVLELLYEAYGFTGAMPREGMDAAQALAAPQATLMT
                     TIASGIFAHNLEWVYIFTGIAIGAVLIVVDLVLKKSSGGKLALPVLAVGMGIYLPPSV
                     NMPIVAGAVLAAVLKHIIGKKAENREGRLKNAERIGTLFSAGLIVGESLIGVIMAFII
                     AFSVTNGGSDAPLALNLQNWDAAASWLGLAFFVTGMFFFAQRVLKAGR"
     gene            complement(3749..4306)
                     /gene="rfbC"
                     /locus_tag="WJJ54_001655"
     CDS             complement(3749..4306)
                     /gene="rfbC"
                     /locus_tag="WJJ54_001655"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEZ7342496.1"
                     /translation="MNIIDTALPDVKILKPQVFTDGRGFFMETFRDGWFKENIADRTF
                     VQENHSKSGKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLS
                     AQNQCQLWIPEGFAHGFCVLGDAAEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPLQTA
                     PLLSPKDLAGKAWAQAEKLRLTLSR"
     gene            complement(4351..>4464)
                     /locus_tag="WJJ54_001656"
     CDS             complement(4351..>4464)
                     /locus_tag="WJJ54_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase"
                     /protein_id="HEZ7342497.1"
                     /translation="EEIAWRNVWLTKKDVETRAKPLEKTAYGQYLLRLIGK"
BASE COUNT          938 a         1011 c         1321 g         1194 t
ORIGIN      
        1 gataaaaaat aggggaacct gtaaaggaag gggcatcggc tgccgccggt gcttttttgt
       61 tttttgtttg gaagggaaat ggctggaaaa agacctgcgc tatatcgggg aatgaatcga
      121 cgcaaaggaa atgccgtctg aacatgcgtt cgggcggcgt ttttataaca aaaacacttc
      181 atggcggttg gttttatgcc tgtctaagtt tttgtgtcgt gcatacctga agatttcaga
      241 cggcatcggt ttatgctgtc tgaaaagtgt attccgtttc agtttgtaag ctatggcagt
      301 ctgtttgtct tgtgttttgc gtaattgccc ttattttaag ccgtgatttt attttgaatt
      361 agatgaaaaa atgagtaatc aagattttta tgcgacgctg ggtgtggcaa gaacagctac
      421 cgatgatgag attaaaaaag cctaccggaa attggcgatg aaatatcatc ccgaccgcaa
      481 tcctgacaat aaagaggcgg aagagaagtt taaagaagta caaaaggcgt atgaaacttt
      541 gtccgacaag gaaaagcgcg ctatgtacga ccagtatggt catgcggcgt ttgaaggcag
      601 cggacagggg ggcttcggag ggtttggcgg atttggcggt gcgcagggtt ttgactttgg
      661 ggatattttc agccaaatgt ttggaggcgg ttcggggcgc gcccagcctg attatcaggg
      721 tgaggacgtt caagtcggta tcgaaatcac gcttgaagaa gccgcaaaag gtgtgaagaa
      781 acgcatcaat attccgactt atgaagcgtg tgatgtctgt aacggcagcg gcgcgaaacc
      841 ggggacatcc ccggaaacct gcccgacttg caaaggttcg ggtacggtgc acatccagca
      901 ggcgattttc cgtatgcagc agacttgtcc gacctgccac ggtgcgggca aacacattaa
      961 agaaccttgc gtcaaatgcc gtggcgcggg gcggaataag gcggtcaaga cggtggaagt
     1021 caatattccc gccggtatcg atgacgggca gcgtatccgt ttgagcggcg aaggcggacc
     1081 gggtatgcac ggtgcgcctg ccggcgacct gtatgtaacc gtccgcattc gggcgcataa
     1141 gattttccaa cgcgacggtc tggacttgca ttgcgaactg ccgatcagtt ttgccacggc
     1201 tgctttgggc ggggagttgg aagtgccgac cttggacgga aaggtcaagc tcaccgtccc
     1261 caaagaaacc caaaccggca ggaggatgcg cgtgaagggt aagggtgtca aatctttacg
     1321 cagcagcgcg accggcgatt tgtactgcca tattgttgtc gaaacgcctg tcaatttgac
     1381 cgaccgtcaa aaagagcttt tggaagaatt tgagcggatt tctaccggct tggaaaacca
     1441 aacaccgcgc aagaaatcgt ttttagacaa gctgcgcgat ttgtttgatt gattttaagt
     1501 tttggaaaca agcagccgta tcggggaatc tccctgatac ggctgttttg tttgtttaaa
     1561 aatagttttt attttcaatg gggtatgggg cagggtggga taactgtttt taactgttct
     1621 ttttaaaact tgacatcatg gcgcgatgcc aacaatatgt gaacgtctgt tgtcaaagga
     1681 agaataatga ataaatcttt atccgggtcg gtagaagaat accgcgaact gacgctccga
     1741 ggcatgatac tcggtgcatt gatcactgta atttttactg cgtccaacgt ttacctcggt
     1801 ttgaaagtcg ggctgacctt tgcctcgtcg attccggcgg cggtaatttc gatggcggtt
     1861 ttaaagtttt tcaaaggcag caatattttg gaaaacaaca tggtgcagac ccaagcctcg
     1921 gctgcgggta cgctttcgac catcatcttc gtcctgcccg gtttgctgat ggcgggctac
     1981 tggagcggtt tcccgttctg gcagacgacg cttttatgta ttgccggcgg gattttgggg
     2041 gtgattttta ccattccgct gcgttacgcg atggtggtaa aaagtgagct gccttacccg
     2101 gaaggtgtgg cggctgctga aattttgaaa gtgggcggtc atgaagaagg ggataaccgt
     2161 cagggaggca gcggcatcaa agagctggcg gccggcggtg cgttggcggg attgatgagc
     2221 ttttgcgccg gaggtctgcg cgtgattgcc gacagcgcga gttattggtt taaaagcggt
     2281 acggcgattt tccaactgcc gatgggcttt tcactggcat tgttgggcgc gggctatttg
     2341 gtcggactga cgggcggtat cgccatcctg ttgggcattt cgattgcttg gggcattgcc
     2401 gtgccgtatt tctcctcaca cattccgcaa ccttccgata tggaaatggc ggcgtttgcg
     2461 atgaagctgt ggaaggagaa agtgcgtttt atcggtgcgg ggactattgg cattgcggcg
     2521 gtttggacgc tgttgatgct gctcaagccg atggtggaag gcatgaagat gtcgttcaag
     2581 agttttggcg gcggtgcgcc cgctgcggaa cgcgccgaac aggatttgtc gcctaaagcc
     2641 atgatttttt gggtgctggc gatgatgttt gttttaggcg tgtcgtttta ccactttatc
     2701 ggcgattcgc acattacggg cggcatggct tggcttttgg tggtcgtttg cacgcttttg
     2761 gcttccgtca tcggcttttt ggtcgccgcc gcctgcggtt atatggcagg tttggtcggc
     2821 tcgtcttcca gcccgatttc cggcgtgggc atcgtgtccg tcgtcgttat ttcactggtt
     2881 ttgctgctgg taggcgaatc cggaggtttg ttggcggatg aggctaaccg caaatttttg
     2941 ctggcactga ctttgttttg cggctcggca gtaatctgcg tggcttcgat ttccaatgac
     3001 aacctgcaag acttgaaaac cggctacctg ctcaaagcca cgccttggcg gcagcaagtc
     3061 gccctgatta tcggctgtat cgttggtgcg ctggttattt cgcccgtgtt ggaactgctt
     3121 tacgaagcct acggctttac tggcgcaatg ccgcgcgaag gcatggatgc ggcgcaggct
     3181 ttggcagctc ctcaagcgac tttgatgacg accatcgcgt cgggcatttt cgcccacaac
     3241 ctcgaatggg tctacatctt taccggcatc gcgattggag cggtattaat cgtcgtcgat
     3301 ttggtgttga aaaaatcatc aggcggcaaa cttgccctgc ccgtccttgc ggtcggtatg
     3361 ggtatttatc tgccgccgtc cgtcaatatg cccatcgtgg caggcgcggt gttggcggcg
     3421 gtgttgaaac acatcatcgg taaaaaagcg gaaaaccgcg aaggccgtct gaaaaacgcc
     3481 gagcgcatcg gaaccttgtt ctccgccggc ctgattgtcg gtgaaagcct gatcggtgtg
     3541 attatggcgt ttattattgc cttctccgtg accaacggcg gctcggatgc gccgctcgcg
     3601 ttgaatctgc aaaactggga tgccgccgct tcttggttgg gtttggcgtt cttcgttacc
     3661 gggatgtttt tctttgcaca gcgcgtactg aaggcgggta ggtagcctgt cggaaaaaat
     3721 gccgtctgaa acgttcagac ggcatttttt atcgggaaag cgtaaggcgg agcttttcgg
     3781 cttgcgccca cgctttaccg gcaagatctt tgggcgacag cagcggcgcg gtttgaagcg
     3841 gccagcctat gccgactgtc gggtcgttcc atattaaaac ctgttcggct tcaggcttgt
     3901 aatagtccgt gcatttgtac acgacttccg ctgcgtcgcc caaaacgcaa aacccgtgcg
     3961 cgaagccttc gggtatccaa agctggcatt ggttttgcgc ggacagggtt gcgcccgccc
     4021 atttgccgaa agtcggcgaa ccttcgcgca tatcgacggc cacgtcgaat acttcgccga
     4081 caactacgcg tacgagtttg ccttgtgtgt tttcggtttg gtagtgcagg ccgcgcaata
     4141 cgcctttgcc ggatttggag tggttttcct gcacgaaggt tcggtcggca atattttctt
     4201 tgaaccaccc gtcgcggaag gtttccataa aaaaaccgcg cccgtctgtg aagacttgcg
     4261 gttttaaaat ttttacgtcg gggagggcgg tgtcgatgat gttcatgatt ttctctgtat
     4321 gccgtctgaa gaaagtggtt cagacggcat ttatttgccg attaggcgca gcaggtattg
     4381 cccgtaggcg gttttttcca aaggctttgc ccgtgtttcc acatcttttt tcgtcagcca
     4441 gacgttgcgc caagcgattt cttc
//
LOCUS       DAWKJW010000153         4425 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.153, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000153 DAWKJW010000000
VERSION     DAWKJW010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4425)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4425)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4425
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.153"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            26..2041
                     /locus_tag="WJJ54_001657"
     CDS             26..2041
                     /locus_tag="WJJ54_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEZ7342498.1"
                     /translation="MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLENDKARTLS
                     DGILAQMQDTRQIPFCQEHRARMYHFHQDAEYPKGVYRVCAAATYRSGYPEWKILFSV
                     ADFDELLGDDVYLGGVSHLVEKPDRALLTLSKSGGDTAYTLEVDLEAGELVEGGFHFP
                     AGKNHVSWRDENSVWVCPAWDERQLTESGYPREVWLVERGKSFEESLPVYQIGEDGMM
                     VNAWRYLDPQGSPIDLIEASDGFYTKTYLQVSAEGEAKPLNLPADCDVVGYLAGHLLL
                     TLRKDWHRANQSYPSGALVAVKLNRGEIGAAQLLFAPDETQALESVETTKRFVVASLL
                     ENVQGRLKAWRFTDGKWQEAELPRLPSGALEMTDQPWGGDVVYLAASDFTTPLTLFAL
                     DLNVMELTVMRRQPQQFDSDGINVQQFWTTSADGERIPYFHVGKNAAPDMPTLVYAYG
                     GFGIPELPHYLGSIGKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLA
                     VVRDLSERGMSSPKHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLS
                     AGSSWTDEYGNPQKYEVCKRWLGELSPYHNLSDDVPYPPALITTSLSDDRVHPAHALK
                     FYAKLRETSPQSWLYSPDGGGHTGNGTQRESADELACVLLFLKEFLG"
     gene            complement(2155..3111)
                     /locus_tag="WJJ54_001658"
     CDS             complement(2155..3111)
                     /locus_tag="WJJ54_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7342499.1"
                     /translation="MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEM
                     CINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGE
                     IWLVRGELADVSETLLPDNSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFTL
                     QRLAQNAAALTAAACPLLQRSFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRR
                     RIDEAADILQHEFVRPLTIAEIARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHAL
                     ALIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC"
     gene            3347..4309
                     /locus_tag="WJJ54_001659"
                     /pseudo
     CDS             3347..4309
                     /locus_tag="WJJ54_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574230.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
BASE COUNT          937 a         1204 c         1384 g          900 t
ORIGIN      
        1 acctgcccaa ccctcaagga ccccgatgaa atcctacccc gacccctacc gccattttga
       61 aaacctcgat tccgccgaaa cgcaaaactt cgctgctgaa gcgaatgccg aaacgcgcgc
      121 gcgtttttta gaaaacgaca aggcgcgcac gctgtcggac ggcattttgg cgcagatgca
      181 ggacacgcgg cagattccgt tttgtcagga acaccgcgcg cggatgtacc atttccatca
      241 ggacgcggag tatccgaagg gcgtgtaccg cgtgtgtgcg gcggcgacgt atcgttccgg
      301 ctatcccgag tggaaaatcc tgttttcagt ggcggatttc gacgagctgc tcggcgacga
      361 tgtgtatttg ggcggcgtgt cgcacttggt ggaaaagccc gaccgtgcgt tgttaacact
      421 gagcaaatcg ggcggcgata cggcgtacac gctggaagtg gatttggaag caggggagtt
      481 ggtagaaggc ggttttcact ttccggcagg caaaaaccat gtgtcgtggc gcgatgaaaa
      541 cagcgtgtgg gtgtgtccgg cctgggacga gcggcagttg accgaatcgg gctatccgcg
      601 cgaggtgtgg ctggtggaac gcggcaaaag tttcgaggaa agcctgccgg tgtaccaaat
      661 cggcgaagac gggatgatgg tgaacgcgtg gcgttacctc gatccgcagg gttcgccgat
      721 tgatttgatt gaagcgtctg acggttttta caccaaaacc tatttgcagg tgtcggccga
      781 aggcgaggcg aaaccgttaa acctgcctgc tgattgcgat gtggtcggct atctggcggg
      841 gcatcttttg ctgacgctgc gcaaggactg gcaccgcgcg aaccaaagct atccgagcgg
      901 cgcgctggta gcggtgaaac tgaatcgcgg cgaaatcggg gcggcgcagc ttttgtttgc
      961 gcctgatgaa acgcaggcat tggaaagcgt ggaaacgacc aagcgttttg tcgtggcgag
     1021 tctgctggaa aacgtacaag gccgtctgaa agcgtggcgt tttaccgacg gcaaatggca
     1081 ggaagccgaa ctgccgcgcc tgccctcggg cgcgttggaa atgaccgacc aaccgtgggg
     1141 tggcgacgtg gtttaccttg ccgccagcga tttcaccacg ccgctgacgc tgtttgcgct
     1201 ggatttgaac gtgatggaac tgaccgtcat gcgccgtcag ccgcagcagt tcgattcaga
     1261 cggcatcaac gtgcagcagt tttggacgac ttcggctgac ggcgagcgca ttccttattt
     1321 ccacgtcggc aaaaacgccg cgcccgacat gccgacgctg gtctatgcct acggcggttt
     1381 cggcattccc gaattgccgc attatctggg cagcattggc aaatattggc tggaagaggg
     1441 caatgccttt gtattggcga acatccgcgg cggcggcgag ttcggcccgc gctggcatca
     1501 ggcggcgcag ggaatcagca aacacaaaag cgtcgacgat ttgcttgccg tcgtgcgcga
     1561 tttgtccgaa cgcggcatga gttcgcccaa acacatcggt ttgcagggcg gcagcaacgg
     1621 cggcctgatt accgccgctg cctttgtgcg cgagccgcaa agcatcggcg cgctggtgtg
     1681 cgaagtgccg ctgaccgaca tgatccgtta tccgctgctg tccgccggtt caagttggac
     1741 ggacgaatac ggcaatccgc agaaatacga agtctgcaaa cgctggctgg gcgaattgtc
     1801 gccgtatcac aatctttcag acgacgtgcc atacccgccc gcgcttatta ccaccagcct
     1861 cagcgatgac cgcgtccatc ccgcccacgc gctcaagttc tacgccaaac tgcgcgaaac
     1921 ctcgccgcaa tcttggctct actctccgga cggcggtggc cataccggca acggcacgca
     1981 acgtgaatcc gccgacgaac tcgcctgcgt cttgctgttt ttgaaagagt ttttgggcta
     2041 aggtcgggga gcggcactgc cgccgcgaat gaaaaaaggt cgtctgaaac tgctttttca
     2101 gacgaccttt tttaatggtt gtttcaaatc aaaatatcta tgccgccggc cccatcagca
     2161 cttcttcaca tccgaaggca aaaatccgta atgccgtctg aacgcttcgt tgaaccgtcc
     2221 cgcgtggcgg tagccgcaaa agtgcatggc ggcttggacg gtgctgccgg attcgatgag
     2281 ggcgagcgcg tgttccagcc gcaggcggcg caggcatccg gcgacggttt cgccggtttg
     2341 cgctttgaaa tagcgtttca ggtagcattc gttcagtccg acgcggcggg cgatttcggc
     2401 gatggtcagc ggacggacga attcgtgttg caggatgtcg gcggcttcgt ctatgcgccg
     2461 acggcggtaa ccgttgtcgt ggcggcggaa ggtgaagcgc aataatcggg cggagagttc
     2521 cagcgcggcg gcttcgtcgg caagcaggcc gaagccgtcc gattcgaacg agcgttgcag
     2581 cagtgggcag gccgccgccg tcagtgccgc tgcgttttgc gccagccgtt gcagggtgaa
     2641 tcggcctatc gtttgcggcg aaaacaggcg ttcgtccagc aagccttcgt cgtgccagcg
     2701 gcgcagtttt tccagcgaaa aatccaaatg cagcgcgcac atgccgctgt tgtcgggcaa
     2761 cagggtttcg gatacgtccg ccaactcgcc gcgtaccagc cagatttcgc cggcagacgg
     2821 gcggtattcc ctgccgccca tttgtaaccg gttctgcccc gacaccatga cgaacaaggc
     2881 gcagttgtgg ctgaaattgt ggatttcggt gggaaacgcg cccgttccgc cgccgcgcat
     2941 ccgcgacaag gtgatgcccg agtcgaagcg gttgatgcac atttccagat gcaaaccggg
     3001 ctgttttgcc tgcgcaatga gcgcgctgtc ggaacagccg tccaacgccc agccggattt
     3061 atcggagcgg acataggttt ggtactggcg gtagatggcg gcggtgttca tgattggata
     3121 ggaacgagtt gtctaacaaa tgaattaaat aggaattatt accaataatc aagcgcaggg
     3181 attggttgaa acggaaaagg tcgtctgaaa gggtgtttca gacgaccttt tccgtatcgg
     3241 gaatttgttt tgccgtatcg ggaattttgc gttttgcggc gtggtttctg caggttgttt
     3301 gcttaataat aaacattctt attcgtatgc aaaggaaccg cacaccgtga aaccgcgttt
     3361 ttattgggca gcctgcgccg tcctgctgac cgcctgttcg cccgaacctg ccgccgaaaa
     3421 aactgtatcc gccgcatccg catctgccgc cacactgacc gtgccgaccg cgcggggcga
     3481 tgccgttgtg ccgaagaatc ccgaacgcgt cgccgtgtac gactgggcgg cgttggatac
     3541 gctgaccgaa ttgggcgtga atgtgggcgc aaccaccgcg ccggtgcgcg tggattattt
     3601 gcagcctgca tttgacaagg cggcaacggt ggggacgctg ttcgagcccg attacgaagc
     3661 cctgcaccgc tcaatcctca gcttatcatt accggcgggc cgggcgcgga agcgtatgaa
     3721 cagttggcga aaaacgcgac caccatagat ctgacggtgg acaacggcaa tatccgcacc
     3781 agcggcgaaa agcagatgga gaccttggcg cggattttcg gcaaggaagc gcgcggcgga
     3841 attgaaggcg cagattgacg cactgttcgc ccaaacgcgc gaagccgcca aaggcaaagg
     3901 acgcgggctg gtgctgtcgg ttacgggcaa caaggtgtcc gccttcggca cgcagtcgcg
     3961 gttggcaagt tggatacacg gcgacatcgg cctaccgcct gtagacgaat ctttacgcaa
     4021 cgaggggcac gggcagcctg tttccttcga atacatcaaa gagaaaaacc ccgattggat
     4081 tttcatcatc gaccgtaccg ccgccatcgg gcaggaaggg ccggcggctg tcgaagtatt
     4141 ggataacgcg ctggtacgcg gcacgaacgc ttggaagcgc aagcaaatca tcgtcatgcc
     4201 tgccgcgaac tacattgtcg cgggcggcgc gcggcagttg attcaggcgg cggagcagtt
     4261 gaaggcggcg tttgaaaagg cagaacccgt tgcggcgggg aaagagtagg gagtcgtctg
     4321 aaaacggagc ttccgaagga agcggggggt ttctgcgaag ctaaagtgcg gtttcaacga
     4381 attgaaaagc agcctgtatt ttgaaaatac cgctcaagca aacct
//
LOCUS       DAWKJW010000154         4378 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.154, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000154 DAWKJW010000000
VERSION     DAWKJW010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4378)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4378)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4378
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.154"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            141..1109
                     /locus_tag="WJJ54_001660"
     CDS             141..1109
                     /locus_tag="WJJ54_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ7342500.1"
                     /translation="MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQ
                     VMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFVEPSMAGAGQSAALGLLLMSLLL
                     PAAPLPVKMSVAAVAALIGMLVFMLLIRRLPPTAQLMVPLVGIIFGGVVEAVATFVAY
                     EFEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLG
                     LNRTAILWSGLIIVALITSLVIVTVGNIPFIGLVVPNIISRLIGDRLRQSLPAVALLG
                     ASLVLLCDIIGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAYAV"
     gene            1099..2073
                     /locus_tag="WJJ54_001661"
     CDS             1099..2073
                     /locus_tag="WJJ54_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HEZ7342501.1"
                     /translation="MPSEKNIGFMAGSSRPLWVAFALLLVSCGLFMTLNVKGDWDFVL
                     HLRLTKLAALLMVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFALGGV
                     GYASLPLTGKFGFELVVMMGGSLLLFYTLIRQGGRDLPRMILIGVIFGILFRSLSSLL
                     SRMIDPEEFTAAQANMFAGFNTVHSELLGIGALILLVSAAVVWRERYRLDVHLLGRDQ
                     AVNLGISYTRNTLWILLWIAALVATATAVVGPVSFFGLLAASLANHFSPSVRHSVRLP
                     MTVCVGGILLVGGQTVFEHFLGMKAVLSVVVEFAGGLVFLYLVLKHKK"
     gene            2118..2744
                     /locus_tag="WJJ54_001662"
     CDS             2118..2744
                     /locus_tag="WJJ54_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342502.1"
                     /translation="MTQERLPEFFDRAPTLTVQDPLAAFLGAAQDGILTYRYADAVRL
                     CGHSCPTVAGAYLMVIKGLKALYGEELPERGGIEAAMQGARDEGTVGVTASVVQLLTG
                     AAPETGFGGIGIQGRFARRNLLSFGAGEINGTLTLRRKDNGKTVAVSINAALKPFAPE
                     MRELMPKAVGGSASAEELERFGQLWQARVKAFLTESADDPQFVIVREV"
     gene            2828..3586
                     /locus_tag="WJJ54_001663"
     CDS             2828..3586
                     /locus_tag="WJJ54_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ7342503.1"
                     /translation="MITIRNVSYRIGTRPILDNISLDIPEGGITALIGPNGAGKSTLF
                     SFMARLRPLESGSIAYRGKNLAGTPTAELARTLSILTQENSIMSRITVRDLLMFGRYP
                     YHQGRPTAECRRIVNGAIEEFHLQDLSDRYLTELSGGQRQRAMIAMVFCQSTDYVLLD
                     EPLNNLDMYHARSLMQILQKLTREHKRTTVAVLHDINQAAAYADHVVAMKNGKAVLTG
                     TPEEVFTVHNIKELFDMDVDVLDYEGKKLIVHHI"
     gene            3883..>4378
                     /locus_tag="WJJ54_001664"
     CDS             3883..>4378
                     /locus_tag="WJJ54_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin NadA"
                     /protein_id="HEZ7342504.1"
                     /translation="MKHFQSKVLTAAILATFCSGALAATNDDDVKKAATVAIAAAYNN
                     GQEINGFKAGETIYDIGEDGTITKKDATAADVEADDFKGLGLKKVVTNLTKTVNENKQ
                     NVDAKVKAAESEIEKLTTKLADTDAALADTDAALDATTNALNKLGENITTFAEETKTN
                     IVKID"
BASE COUNT          967 a         1242 c         1148 g         1021 t
ORIGIN      
        1 gcgggaatgg cggcaagcgt ttttattgga acttgcccta tcctctgccc atccggaggc
       61 ttcaaacaag gctttccgct ccgacggttc ggactgcctt gtttgaatct tctacgcctt
      121 aacgcttttc ccttctgttt atgactgcca aacctttttc cctcaacctg accaacctcc
      181 tgctgctggc ggtgttgttt gccgtcagcc tgtcggtggg cgttgccgat ttccgctggt
      241 cggatgtgtt ttcgctgtcc gacagccagc aggttatgtt catcagccgc ctgccgcgca
      301 cgtttgcgat tgtgctgacg ggcgcgtcga tggcggtggc ggggatgatt atgcagattt
      361 tgatgcgtaa ccgttttgtc gagccttcta tggcgggcgc gggtcagagt gcggctttgg
      421 gtttgcttct gatgtccctg ctgctgcctg ccgcgccgct gccggtcaaa atgtcggttg
      481 ccgccgttgc cgcgttaatc gggatgctgg tgtttatgct gcttatccgc cgcctgccgc
      541 cgacggcgca gctgatggtg ccgctggtgg ggattatttt cggcggtgtg gttgaggcgg
      601 tggcgacgtt tgtcgcgtat gagtttgaga tgctgcaaat gttgggcgta tggcagcagg
      661 gcgatttttc gagcgtgctg ctggggcggt acgagctgct ttggattacg ggcggtttgg
      721 cggtgtttgc ctatctgatt gccgaccggc tgacgatttt gggtttgggc gaaacggtaa
      781 gcgtgaactt ggggctgaac cggacggcga ttctgtggtc ggggctgatt attgtggctt
      841 tgattacgtc gctggttatc gttacggtcg gcaatattcc gtttatcggg ctggtcgtgc
      901 cgaacatcat cagccgcctg ataggcgaca ggctgcgcca aagcctgcct gcggtggctt
      961 tgctgggtgc gtctttggtt ttattgtgcg acattatcgg acgcgtgatt gtgtttccgt
     1021 ttgaaattcc ggtatcgacc gtcttcggcg tattgggtac ggcgttgttt ttgtggcttt
     1081 tgttgaggaa acccgcctat gccgtctgaa aaaaatatcg gttttatggc aggaagcagc
     1141 cgtccgttgt gggtcgcctt tgcgctgttg ctggtttcct gcggactgtt tatgacgctc
     1201 aacgtcaaag gcgattggga ttttgtactg cacctgcggc tgaccaaact tgccgcgctg
     1261 ctgatggtcg cctatgcggt cggcgtgtcc acgcaactct tccaaacgct gaccaacaat
     1321 ccgattctga ccccttcgat tttgggtttc gattcgctgt atgtgttttt gcagacgctt
     1381 ttggttttcg ctctgggcgg cgtgggctat gcttccctgc cgttgacggg caaattcggc
     1441 tttgaactgg tcgttatgat gggcggctcg ctgctgttgt tctacacgct catccgtcag
     1501 ggcgggcgcg atttgccgcg tatgatttta atcggcgtga ttttcgggat tttgttccgc
     1561 agcctttcct cgctgctttc gcgcatgata gaccccgaag aatttacggc ggcgcaggcg
     1621 aatatgtttg ccggattcaa taccgtccac agcgagcttt tgggcatagg cgcgctgatt
     1681 ctgctcgtca gcgcggcggt cgtttggcgt gaacgctacc gcttggacgt acaccttttg
     1741 gggcgcgacc aagccgtcaa tttgggcatc agctacacgc gcaacacctt atggatactg
     1801 ctttggattg ccgcgctggt ggcgacggcg accgccgttg tcggcccggt aagctttttc
     1861 gggcttctcg ccgcctcgct tgccaaccac ttttccccgt ccgtgcgcca ttccgtccgc
     1921 ctgccgatga cggtttgtgt cggcggcatc ctcttggtcg gcggacagac cgtattcgaa
     1981 cacttcttgg gcatgaaggc ggtattaagc gtggtggtcg aatttgcggg cggactcgtt
     2041 ttcctctatc tcgttttaaa acacaaaaaa tgacggatgc cgtctgaacg gcagcccgcc
     2101 ccgaaaggac aaaccatatg acgcaagaac gtttacccga atttttcgac cgcgccccga
     2161 cgctgaccgt acaagacccg cttgccgcat tcctcggcgc ggcgcaagac ggcatcctca
     2221 cttaccgcta cgccgatgcc gtgcgcctgt gcggacattc ctgcccgacc gtcgcgggcg
     2281 cgtacctgat ggttatcaaa ggactgaaag ccctttacgg cgaagagctg cccgaacgcg
     2341 gcggcatcga agccgccatg cagggagcgc gcgacgaagg cacggtcggc gtaaccgcgt
     2401 ccgtcgtcca actccttacc ggcgcagccc ccgaaaccgg cttcggaggc atcggaatac
     2461 agggacgctt cgcccgccgc aacctcttat cctttggtgc aggcgaaatc aacggcacac
     2521 tgaccctgcg ccgcaaagac aacggtaaaa ccgtcgccgt cagcatcaac gccgccctga
     2581 aacccttcgc acccgaaatg cgcgaactta tgcccaaagc cgtcggcggc agcgcaagcg
     2641 cagaagaact cgaacgcttc ggacaactct ggcaggcacg cgttaaagca tttttgaccg
     2701 aatcggcgga cgacccgcag ttcgtcatcg tccgcgaagt gtgagcgttc agacggcatt
     2761 ccgaatttca aatgccgtct gaaccccgcc aaacaacaac aaacctacgc ccgacaagca
     2821 tccgcctatg attaccatcc gcaacgtcag ctaccgcatc ggcacgcgcc ccattctgga
     2881 caacatcagc ctcgacattc ccgaaggcgg cattaccgcg ctgatcggcc cgaacggcgc
     2941 aggcaagtcc accctgtttt cctttatggc gcggctgcgc ccgcttgaaa gcggcagcat
     3001 cgcctaccga ggcaaaaacc ttgccggcac tcccaccgcc gaactcgccc gcacgctctc
     3061 catcctcacc caagaaaaca gcatcatgag ccgcatcacc gtgcgcgacc tgctgatgtt
     3121 cggccgctat ccctaccacc aaggcaggcc gactgccgaa tgccgccgta tcgttaacgg
     3181 tgcaatcgaa gaattccacc tgcaagacct ctccgaccgc tatctgaccg aactctccgg
     3241 cggacaacgc caacgcgcca tgattgcgat ggtgttctgc caaagcaccg actacgtcct
     3301 tttggacgaa ccgctgaaca acctcgatat gtatcacgcc cgctcgctca tgcagattct
     3361 gcaaaagctc acgcgcgaac acaaacgcac caccgtcgcc gtattgcacg acattaacca
     3421 ggccgccgct tacgccgacc acgtcgtcgc catgaaaaac ggcaaagccg tcctgaccgg
     3481 cacgcccgaa gaagtgttca ccgtacacaa catcaaagaa ctgttcgaca tggacgtgga
     3541 cgtactcgac tacgaaggca aaaaactgat tgtccaccat atctaaatcc gacaaaaagg
     3601 ccgtctgaac attcagacgg caacccatat cctgacaaaa ttaagacacg acaccggcag
     3661 aattgacatc agcataatat gcacatatta acagatatta atgccgaact acctacctgc
     3721 atgaatcaaa taaataaata aataaataaa taaattgcga caatgtattg tatatatgcc
     3781 tcccttcata tatacttcaa tatataaaca aacttggtgg aaataaaata cttgcaaaag
     3841 attttcgccc cattttttaa ccactcacaa aggtaatgag ccatgaaaca tttccaatcc
     3901 aaagtactga ccgcagccat ccttgccact ttctgtagcg gcgcactggc agccacaaac
     3961 gacgacgatg ttaaaaaagc tgccactgtg gccattgctg ctgcctacaa caatggccaa
     4021 gaaatcaacg gtttcaaagc tggagagacc atctacgaca ttggtgaaga cggcacaatt
     4081 accaaaaaag acgcaactgc agccgatgtt gaagccgacg actttaaagg tctgggtctg
     4141 aaaaaagtcg tgactaacct gaccaaaacc gtcaatgaaa acaaacaaaa cgtcgatgcc
     4201 aaagtaaaag ctgcagaatc tgaaatagaa aagttaacaa ccaagttagc agacactgat
     4261 gccgctttag cagatactga tgccgctcta gatgcaacca ccaacgcctt gaataaattg
     4321 ggagaaaata taacgacatt tgctgaagag actaagacaa atatcgtaaa aattgatg
//
LOCUS       DAWKJW010000155         4354 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.155, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000155 DAWKJW010000000
VERSION     DAWKJW010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4354
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.155"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            124..1971
                     /locus_tag="WJJ54_001665"
     CDS             124..1971
                     /locus_tag="WJJ54_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEZ7342505.1"
                     /translation="MYLPSMKHSLPLLAALVLAACSSTHAPSSKTLADNIETADLSAS
                     VPTRPAEPEGKTLADYGGYPSALDAVKQKNDAVVAAYLENAGDSAMAENVRNEWLKSL
                     GARRQWTLFAQEYAKLEPAGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLLE
                     QAAASGLLDGNDAWRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIGK
                     EARKSPNAAALLSEMESGLSLEQRSFAWGVLGHYQSQNLNVPAALDYYGKVADRRQLT
                     DDQIEWYARAALRARRWDELASVISHMPEKLQKSPTWLYWLARSRAATGNTQEAEKLY
                     KQAAATGRNFYAVLAGEELGRKIDTRNNVPDAGKNSVLRMAEDGAIKRALVLFRNSRT
                     AGDAKMRRQAQAEWRFATRGFDEDKLLTAAQTAFDHGFYDMAVNSAERTDRKLNYTLR
                     YISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVMGAQSRVGAQGLMQVMPATAREIA
                     GKIGMDAAQLYTADGNIRMGTWYMADTKRRLQNNEVLATAGYNAGPGRARRWQADTPL
                     EGAVYAETIPFSETRDYVKKVMANAAYYASLFGAPHIPLKQRMGIVPAR"
     gene            2260..2472
                     /locus_tag="WJJ54_001666"
     CDS             2260..2472
                     /locus_tag="WJJ54_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEZ7342506.1"
                     /translation="MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTE
                     RKRKKAAAVKRLQKRLRSQQLPPKMY"
     gene            2604..3050
                     /locus_tag="WJJ54_001667"
     CDS             2604..3050
                     /locus_tag="WJJ54_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEZ7342507.1"
                     /translation="MSLKIRLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERTEA
                     DDAKITAILTKMVKQRKDSAKIYTEAGRQDLADKENAEIEVLHRYLPQMLSAGEIRTA
                     VDAAVAETGAAGMADMGKVMGVLKTRLAGKADMGEVNKILKAVLTA"
     gene            3071..3220
                     /locus_tag="WJJ54_001668"
     CDS             3071..3220
                     /locus_tag="WJJ54_001668"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342508.1"
                     /translation="MPSEPHIAGSDGIFNVPISNRQGQHGFDTPKRVLPINGFRLRPI
                     GQNAV"
     gene            complement(3249..3641)
                     /locus_tag="WJJ54_001669"
     CDS             complement(3249..3641)
                     /locus_tag="WJJ54_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HEZ7342509.1"
                     /translation="MTTSTKPYILRALCEWCSDNSLTPHILVWVNEHTRVPMQYVRDN
                     EIMLNIGATATQNLQIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGMGFELE
                     AYRPDTPPENTSAETAPRPAKKGLKLVK"
     gene            complement(3710..4315)
                     /locus_tag="WJJ54_001670"
     CDS             complement(3710..4315)
                     /locus_tag="WJJ54_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEZ7342510.1"
                     /translation="MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVM
                     NPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELF
                     NHVQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWR
                     LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK"
BASE COUNT         1059 a         1231 c         1200 g          864 t
ORIGIN      
        1 tatgtcggaa acattccaaa ggcggtgcag tttcggcata taattcgggc aaacgcctgt
       61 tcagacggca ttttgtcttt tccaaccctg accgttcagg gttccgattc ttaaggaaat
      121 ccgatgtacc taccctctat gaagcattcc ctgccgctgc tggcggccct ggtgcttgcc
      181 gcgtgttctt cgacacacgc gcccagcagc aagaccctgg cagacaatat agaaactgcc
      241 gatctttcgg caagcgttcc cacccgccct gccgaacccg aaggaaaaac gctggcagat
      301 tacggcggct acccgtccgc actggatgca gtgaaacaga aaaacgatgc cgtcgtcgcc
      361 gcctatttgg aaaacgccgg cgacagtgcg atggcggaaa atgtccgcaa cgagtggctg
      421 aagtctttgg gcgcacgcag acagtggacg ctgtttgcac aggaatacgc caaactcgaa
      481 ccggcagggc gcgcccaaga agtcgaatgc tacgccgatt cgagccgcaa cgactatacg
      541 cgtgccgccg aactggttaa aaatacgggc aaactgcctt cgggctgcac caaactgttg
      601 gaacaggcag ccgcatccgg cttgttggac ggcaacgacg cctggaggcg cgtgcgcgga
      661 ctgctggccg gccgccaaac cacagacgca cgcaaccttg ccgccgcatt gggcagcccg
      721 tttgacggcg gtacacaagg ttcgcgcgaa tacgccctgt tgaacgtcat cggcaaagaa
      781 gcacgcaaat cgccgaatgc cgccgccctg ctgtccgaaa tggaaagcgg tttaagcctc
      841 gaacaacgca gtttcgcgtg gggcgtattg gggcattatc agtcgcaaaa cctcaatgtg
      901 cctgccgcct tggactatta cggcaaagtt gccgaccgcc gccaactgac cgacgaccaa
      961 atcgagtggt acgcccgcgc cgccttgcgc gcccgacgtt gggacgagct ggcttccgta
     1021 atctcgcata tgcccgaaaa actgcaaaaa agcccgacct ggctctactg gctggcacgc
     1081 agtcgcgccg caacgggcaa cacgcaagag gcggaaaaac tttacaaaca ggcggcagcg
     1141 acgggcagga atttttatgc ggtgctggcg ggggaagagt tggggcgcaa aatcgatacg
     1201 cgcaacaatg tgcccgatgc cggcaaaaac agcgtcctcc gtatggcgga agacggcgcg
     1261 attaagcgcg cgctggtgct gttccgaaac agccgaaccg ccggcgatgc gaaaatgcgc
     1321 cgtcaggctc aggcggaatg gcgtttcgcc acacgcggct tcgatgaaga caagctgctg
     1381 accgccgcgc aaaccgcgtt cgaccacggt ttttacgata tggcggtcaa cagcgcggaa
     1441 cgcaccgacc gcaaactcaa ctacaccttg cgctacattt cgccgtttaa agacacggta
     1501 atccgccacg cgcaaaatgt taatgtcgat ccggcgtggg tttacgggct gattcgtcag
     1561 gaaagccgct tcgttatggg cgcgcaatcc cgcgtaggcg cgcaggggct gatgcaggtt
     1621 atgcctgcca ccgcgcgcga aatcgccggc aaaatcggta tggatgccgc acaactttac
     1681 accgccgacg gcaatatccg tatggggacg tggtatatgg cggacaccaa acgccgcctg
     1741 caaaacaacg aagtcctcgc caccgcaggc tataacgccg gtcccggcag ggcgcgccga
     1801 tggcaggcgg acacgcccct cgaaggcgcg gtatatgccg aaaccatccc gttttccgaa
     1861 acgcgcgact atgtcaaaaa agtgatggcc aatgccgcct actacgcctc cctcttcggc
     1921 gcgccgcaca tcccgctcaa acagcgtatg ggcattgtcc ccgcccgctg acgtaccgat
     1981 gccgtctgaa acccgcccgg tctttcagac ggcattttta tcccgaacgg cattgacggc
     2041 gaaccataaa tataagacaa tccgaaaatt gtttttcctg ctttttcaag cagcttgaca
     2101 cggcacaagc cgacccgtta ggaggtgatg tttccgtcac ggcgcgtatc ccgccgccgc
     2161 aaggcacagc gatacggtaa accttcaaca ccgtctgccc taccctttcc accgatatga
     2221 tgggcagatg aaacaaccga atttattaaa ggaaataaaa tgcctgcaat ccgcgtaaaa
     2281 gagaatgaac catttgaagt cgctatgcgc cgtttcaaac gcgccgtaga aaaaaccggc
     2341 ctgctgaccg agctgcgcgc ccgcgaagcc tacgaaaaac cgactaccga acgcaaacgc
     2401 aaaaaagcgg cagccgtaaa acgcctgcaa aaacgcctgc gcagccaaca actgccgccc
     2461 aaaatgtact aaacgttcaa gtacagatta caggtcagcc ctgtgatatg aggacacacc
     2521 gcaagacctg ctctgcggtg tgttttgctt ttcagacggc atcgaaaccc gccgtttcta
     2581 tccgacatcc cagcgaggac attatgagcc tgaaaatccg ccttaccgaa gacatgaaaa
     2641 ccgcgatgcg cgccaaagac caagtttccc tcggcaccat ccgcctcatc aacgccgccg
     2701 tcaaacagtt tgaagtggac gaacgcaccg aagccgacga tgccaaaatc accgccatcc
     2761 tgaccaaaat ggtcaaacag cgaaaagaca gcgcgaaaat ctacactgaa gccggccgtc
     2821 aggatttggc agacaaagaa aacgccgaaa tcgaggtact gcaccgctac cttccccaaa
     2881 tgctctccgc cggggaaatc cgtactgcgg tcgatgccgc cgttgccgaa accggcgcgg
     2941 caggtatggc ggatatgggc aaagtgatgg gcgtattgaa aacccgactt gccggcaaag
     3001 ccgatatggg cgaagtcaac aaaatcctga aagccgtgct gaccgcctga ttgtatgaat
     3061 ataaggaaaa atgccgtctg aaccccatat cgcaggttca gacggcattt tcaatgtccc
     3121 aatatcgaat cggcaggggc aacacggttt cgatacaccg aaacgggttt tgccgataaa
     3181 cggattccgt ttgcgcccca tcggacaaaa tgccgtctga aacacgattc cgttcagacg
     3241 gcatagattt atttgaccaa tttcaagcct tttttggcgg gccggggcgc ggtttcggca
     3301 gaggtgtttt caggcggcgt gtcggggcga tacgcttcca attcaaaccc cataccttcg
     3361 ccggtctccc gtgcgaaaag gctgaggacg tgtccgacag gtatccatat atcgtgcgcc
     3421 tgtccgccga agcgggcgga aaaactgatc caatcgttgt cgatttgaag gttttgcgtg
     3481 gcggtcgcgc cgatgttgag cataatttcg ttgtcgcgga catactgcat aggaacgcgc
     3541 gtgtgttcgt tgacccagac gaggatatgc ggcgtgaggc tgttgtcgct gcaccattcg
     3601 caaagtgcgc ggaggatata gggtttggtg gaagtagtca taatgctccc cataatgtgc
     3661 ctgaatatag aaatgcctga aaccgtcagg ttttacaggc atttcaaact tatttgcgca
     3721 tggctttttc ggcgggtgtc agtgcttcga taaaggcttc gcgctggaag atgcgctcgg
     3781 cgtatttgag cagcggcgcg gcacttttgc ccagtttgac atcgtagtgg tcgagccgcc
     3841 acagcagcgg agcaagggcg acatcaatca tagaaaaatc ttcgccgagg atgtatttgc
     3901 ttttgctgaa cgaaggggca agcatggtca gaccgttgcc gatggcttcg cgcgcttttg
     3961 cctgttcctt gttggtggcg gcggggtttt ccaaaacttg gacgtggttg aacaattctt
     4021 tttccatacg gtacagcacc agccggcccc tgccgcgcat aacgggatcg ccgggcataa
     4081 gctgcggatg ggggaagcgt tcgtcgatgt attcgttgat gatgttggac tcgtgcagca
     4141 ccaaatcgcg ttcgaccagc acagggactt ggttatacgg gttcatgacg gcgaggtctt
     4201 cgggtttgtt gtaaatatcg acgtctttga tttcaaaatc catacctttt tcgtacaaaa
     4261 cgaaacggca gcggtggctg aaggggcagg taatgccgga atagagggtc atcataataa
     4321 ttgtcgctcc tgtgtgatgc ctgtaaaacg gctg
//
LOCUS       DAWKJW010000156         4310 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.156, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000156 DAWKJW010000000
VERSION     DAWKJW010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4310
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.156"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..247)
                     /locus_tag="WJJ54_001671"
     CDS             complement(<1..247)
                     /locus_tag="WJJ54_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342511.1"
                     /translation="MIEMSKDYRNDLYDVYVSYPPQVDRGLIRECLRENLGEEKAEGL
                     IESLDSKPQVLVEEKCTWAKREELHDYFSYLGLDIITR"
     gene            complement(244..390)
                     /locus_tag="WJJ54_001672"
     CDS             complement(244..390)
                     /locus_tag="WJJ54_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342512.1"
                     /translation="MPSERSDGIFTFGKYIIGMNSHIIRLFEDESGFPKGTGGTVSGV
                     FVPL"
     gene            complement(407..745)
                     /gene="erpA"
                     /locus_tag="WJJ54_001673"
     CDS             complement(407..745)
                     /gene="erpA"
                     /locus_tag="WJJ54_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HEZ7342513.1"
                     /translation="MSDESPIIFTDSCCAKVADLIAEENNPDLKLRVFVNGGGCSGFQ
                     YGFTFDEIKNDDDFEIEKNGLVFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAET
                     TCGCGSSFSV"
     gene            complement(877..1563)
                     /locus_tag="WJJ54_001674"
     CDS             complement(877..1563)
                     /locus_tag="WJJ54_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7342514.1"
                     /translation="METFKDRLVFLWKSEARQAKIASDIEMTIAGFSRIWNEGGLPKS
                     ETLKKIKQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDIRA
                     AAGYGQFVDHEEPVFTMAFRRHWIENYVTRDTKNLSVISVKGDSMEGVLNDGDSILVN
                     HGENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEAYPAFEINLNDLTDDVEII
                     GRVEWFGRTI"
     gene            1751..2023
                     /locus_tag="WJJ54_001675"
     CDS             1751..2023
                     /locus_tag="WJJ54_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342515.1"
                     /translation="MKKTGKYLIYTAAFTAFCFAFQENRSEAKQPDITLSASLCEQFN
                     ILNAKDMDAEQVSLSKECDIIESSHDWEKEYGNLNEQEMLAGIVYE"
     gene            2231..4159
                     /gene="dnaK"
                     /locus_tag="WJJ54_001676"
     CDS             2231..4159
                     /gene="dnaK"
                     /locus_tag="WJJ54_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEZ7342516.1"
                     /translation="MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLD
                     GGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAW
                     VKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLDVKRIINEPTAAALAFGMDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFE
                     VLATNGDTFLGGEDFDQRLIDYIIDEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSS
                     GQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLIARSIEPCRTALKDAGLSTGD
                     IDDVILVGGQSRMPKVQEAVKAFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLL
                     LDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERAS
                     ANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGL
                     SEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKI
                     EAALKEAEEAVKGDDKTAIDAKAEALGTASQKLGEMVYAQAQAEAQAGESEQANASAK
                     KDDDVVDADFEEVKDDKK"
BASE COUNT         1317 a         1130 c          867 g          996 t
ORIGIN      
        1 tccgggtaat aatatccaaa cccaaatagc tgaaataatc gtgcaactct tcccgtttcg
       61 cccaagtgca tttttcctca accagcactt gaggtttgga atcgagcgat tcgatcaatc
      121 cttccgcctt ttcctcgccg agattctccc tgaggcactc ccggataagc ccgcgatcca
      181 cttggggcgg gtaggaaaca tatacatcgt acaaatcatt tcggtaatct ttactcatct
      241 caatcataag ggaacaaata cgcctgatac cgttccgccc gttcctttcg ggaaacccga
      301 ttcatcttca aacaatcgga ttatatgtga attcatcccg ataatatatt ttccaaaagt
      361 aaaaatgccg tctgaacgtt cagacggcat cacacaaacc aagcggtcat acggaaaacg
      421 acgatccgca accgcaggtt gtttccgcat tcggattgcg gatgacgaat tgcgaaccct
      481 gcaaactttc cgtatagtcg atttccgcac cgaccagata ttgatagctc atcggatcga
      541 ccaaaaagac caaaccgttt ttctcaattt caaaatcgtc gtcgtttttg atttcgtcaa
      601 aagtaaatcc gtactggaaa cccgaacagc cgccgccatt gacaaaaacc cgcaatttca
      661 aatcgggatt gttttcttcg gcaatcaaat cggcaacttt ggcacagcag ctgtcagtaa
      721 aaataatagg gctttcatcc gacatggtgt tattccttaa tataatattt tctgcattct
      781 ctctcaaacc ccctttaaag gcaagcaggc ttcgcctttg aaaaaggaat tgttccaata
      841 gataagtttg accgcctgca atttcaagcc ccaaactcaa atcgtcctgc cgaaccactc
      901 gacacgcccg ataatctcca catcatcggt caaatcgttc aaattgattt caaaagcagg
      961 ataagcctcg tttgcagaaa tcacattgat aatcccgccc ggtacaatct gtaaacgttt
     1021 aaccagcaga ttttcattaa tccgcaacac atacagaccg tccctcggcg tattttcacc
     1081 atgattgacc aaaatcgaat cgccgtcatt caaaaccccc tccatcgaat cccccttgac
     1141 ggaaattaca gacaggtttt tcgtatcgcg ggtaacataa ttctcaatcc aatgccgtct
     1201 gaacgccatt gtaaataccg gttcctcatg atcgacaaac tgcccgtatc ccgcagccgc
     1261 ccgaatatca tatctcggca caaagacaaa ctcgtccgta tcgacttcat tgcccaaagt
     1321 atcgtaagca agggattttt ttggggcttc atccggaaac ggattaccct ccccggtcag
     1381 cagccaatcg atactacacc ccttcaactg cttgattttt ttcaatgttt cagactttgg
     1441 cagaccgcct tcattccata tcctgctgaa gcccgcaatc gtcatttcaa tatcggatgc
     1501 gatttttgcc tgcctcgctt cgcttttcca taaaaaaacc agtctgtctt taaaggtttc
     1561 cataaatatc cttccactcc ccttcattca atcatctaaa gtaaacatga aatatatttt
     1621 accttagcta tccaaaaaac ggaacaatta tgataaacta aatttaaatt atgatttttc
     1681 ttacttaata cataattttt cagatttttc cataggttta atcctgaatt gacagaaaaa
     1741 ggatagaaaa atgaagaaaa ccggcaaata tcttatctat actgcggcat ttaccgcatt
     1801 ctgctttgcc ttccaagaaa accgttctga agccaaacag cccgacatca ctttatccgc
     1861 atccctgtgc gaacaattca acatactgaa cgccaaagat atggatgcag aacaagtctc
     1921 cctttccaaa gaatgcgaca tcatcgagtc ttcacacgac tgggaaaaag agtacggcaa
     1981 cttgaacgaa caggaaatgc tcgccggcat cgtctatgaa taaacctgcc tgccatttga
     2041 aacattatgc ttgaatgcat tggagccaaa tgtattaaat caaatataaa accaatatat
     2101 tcataaagtt atatacttat agccatgctg tagcttgaaa cagcccgccg cccgccctat
     2161 ttacagccca tcgggacaaa atgttccaac atatttctca aaataagcaa aatcaaatag
     2221 gattatccac atggcaaaag taatcggtat cgacttaggt acaaccaact cttgtttggc
     2281 catttccgaa aacggtcaaa ccaaagtgat cgaaaacgca gaaggcgcac gcaccacgcc
     2341 gtccgttatc gcttatttgg acggcggcga aatcctcgtc ggcgcgcctg ccaaacgcca
     2401 agccgtaacc aacgctaaaa acactattta cgccgccaaa cgtttgatcg gccacaaatt
     2461 tgaagacaaa gaagtccaac gcgacatcga atctatgcct tttgaaatca tcaaagccaa
     2521 caacggcgac gcatgggtga aagcgcaagg caaagagctg tctcctcctc aaatttccgc
     2581 agaagtcctg cgtaaaatga aagaagccgc cgaagcttac ttgggcgaaa aagtaaccga
     2641 agccgtgatt accgttccgg cctacttcaa cgacagccaa cgtcaagcta ccaaagacgc
     2701 aggccgtatc gccggtttgg acgtgaaacg catcatcaac gagccgaccg cagccgcttt
     2761 ggcattcggt atggacaaag gcgacaacaa agaccgcaaa gtagccgtat atgacttggg
     2821 cggcggtact ttcgatattt ccatcatcga aatcgccaac ctcgacggcg acaaacaatt
     2881 tgaagtattg gctaccaacg gcgatacttt cttgggcggt gaagacttcg accaacgctt
     2941 gatcgactac atcattgacg agtttaaaaa agaacaaggc attgatttga aacaagacgt
     3001 catggctctg caacgtctga aagaagctgc cgaaaaagcc aaaatcgaat tgtccagcgg
     3061 ccagcaaacc gaaatcaacc tgccgtacat caccatggac gcaaccggcc cgaaacactt
     3121 ggcgatgaaa attacccgcg ccaaattcga aagcctggtt gaagacctga ttgcccgctc
     3181 tatcgagcct tgccgcaccg cattgaaaga tgccggtctg agcactggcg acatcgacga
     3241 cgtgattttg gtcggtggtc aaagccgtat gccgaaagta caagaagccg ttaaagcctt
     3301 cttcggcaaa gagccgcgca aagacgtgaa ccctgacgaa gctgtcgccg taggcgcagc
     3361 gattcaaggc gaagtgttaa gcggcggccg cagcgacgta ttgctgctgg acgtaacccc
     3421 tctgtccttg ggtatcgaaa ccatgggcgg cgtgatgacc aagctgattc aaaagaacac
     3481 aactattccg actaaagcgt cgcaagtgtt ctctaccgcc gaagacaacc aaagcgcagt
     3541 aaccatccac gtactgcaag gcgaacgcga acgcgcttct gccaacaaat ctttgggtca
     3601 gttcaacttg ggcgacatcg cacctgcacc gcgcggtatg ccgcaaattg aagttacttt
     3661 cgacatcgac gccaatggta tcttgcacgt ttctgccaaa gacaaaggca ccggtaaagc
     3721 agccaacatt accatccaag gttcttcagg tttgagcgaa gaagaaatcg aacgcatggt
     3781 gaaagatgcc gaagccaatg ctgaggaaga taaaaagctg actgaattgg tcgcttcccg
     3841 caaccaagcc gaagccctga ttcactccgt gaaaaaatct ttggccgact acggcgacaa
     3901 actcgacgct gccgagaaag aaaaaatcga agccgcgctg aaagaagccg aagaagccgt
     3961 gaaaggcgac gacaaaaccg ccatcgatgc caaagccgaa gcactgggca cagccagcca
     4021 aaaactgggg gaaatggttt acgctcaagc acaagctgaa gcccaagcag gcgaaagcga
     4081 acaagccaat gcttctgcaa agaaagacga tgatgtcgta gatgccgact ttgaagaagt
     4141 aaaagacgac aaaaaataat tgatgccgtc tgaaaaaagc gcgaaccgtt tgattcgcgc
     4201 ttttttcaat tgagataaaa gaccatagca taacagaggt tccaaattca tctaccgtga
     4261 tattcccaag cccaagttct aactgttata tcggttctct ggaaattttt
//
LOCUS       DAWKJW010000157         4277 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.157, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000157 DAWKJW010000000
VERSION     DAWKJW010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4277)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4277)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4277
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.157"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            67..327
                     /locus_tag="WJJ54_001677"
     CDS             67..327
                     /locus_tag="WJJ54_001677"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342517.1"
                     /translation="MENAAASPAGRFRRHSRRRKCPTLKAQTHTKNRMPAPATIRQIP
                     LFFPNRLQVSPIRRVMPPPPFKGNARVNGFAVGKAAGYRYVS"
     gene            434..958
                     /gene="nspA"
                     /locus_tag="WJJ54_001678"
     CDS             434..958
                     /gene="nspA"
                     /locus_tag="WJJ54_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein NspA"
                     /protein_id="HEZ7342518.1"
                     /translation="MKKALATLIALAIPAAALAEGASGFYVQADAAHAKASSSLGSAK
                     GFSPRISAGYRINDLRFAVDYTRYKNYKAPSTDFKLYSIGASAIYDFDTQSPVKPYLG
                     ARLSLNRASVDLGGSDSFSQTSTGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNTVKN
                     VRSGELSAGVRVKF"
     gene            1094..1483
                     /locus_tag="WJJ54_001679"
     CDS             1094..1483
                     /locus_tag="WJJ54_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEZ7342519.1"
                     /translation="MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVV
                     GNGDFRAEARQVFQNLQAVAEAAGGTLADIVKLNAYLTDLGNFAVFNEVMAEFIAEPF
                     PARAAVGVASLPKGVQVEAEAVLVLNA"
     gene            1561..2391
                     /locus_tag="WJJ54_001680"
     CDS             1561..2391
                     /locus_tag="WJJ54_001680"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HEZ7342520.1"
                     /translation="MAHYAIGDIQGCFDELTALLGKIGFNHGTDTLWLTGDIVNRGPK
                     SLETLQFCIRHENSVQIVLGNHDLHLLAVGCGEGAPKRSDTIEPILKHPDGKKMLDWL
                     RAQPLLIREGSRVMVHAGILPQWRIAKAESLAREAEAELRGKKYVKFFSKMYGNKPAA
                     WDEGLEGYARLRFIVNAFTRMRALTFKNELDFDYKSTVKKMPPYLRPWFKAPDRQNLD
                     RTIIFGHWSSLGYTNADNVISLDTGALWGGQLTAVNLETEEITQVQAAGGIDWKSFAK
                     "
     gene            2406..3863
                     /locus_tag="WJJ54_001681"
     CDS             2406..3863
                     /locus_tag="WJJ54_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HEZ7342521.1"
                     /translation="MHKILPIAHVLSRLGMLFSFILLIPAALSYAFSDGAYTAFATTA
                     TVTLSGSCIVRLATLRFRRELRPRDGFTLVLMLWLAFAAMAAMPMYLYFPNMGFTDAF
                     FESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLDVGGTQL
                     FKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAAACLHFAGMGWFDAVCHAMATL
                     SLGGFSTHDASIAYYNSPLIEAVIIVFTIVGGINFANHFAALNSRSLKTYWKDEECRT
                     MLLLLSGSILAAALYLWHTGYYAGFTESLRYTAFNFVSIGLANGLANTDFAQWPLLIS
                     LWMFFLANILANSGSTGGGIKTIRALVLFKFSLREMMVLLHPKAVRTVKISGKAIPDR
                     LALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIACITNAGPGLGEVGPAGNYA
                     GLDVMQKWICVTAMLLGRLEIFTVFILFTPAYWKK"
     gene            complement(3904..>4277)
                     /locus_tag="WJJ54_001682"
     CDS             complement(3904..>4277)
                     /locus_tag="WJJ54_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342522.1"
                     /translation="ENCEDLGFAIVCMFYDAINLSEFKLWLDIVVRDTPIDTIPLYIF
                     DLIDFDKSIGEIYDVIGVVNYGYISNDQKNALTGIAFLRGIDVYDPPISKEKALKALE
                     KYPEIYQRFQHFFPFVELPLF"
BASE COUNT         1012 a         1394 c          968 g          903 t
ORIGIN      
        1 gcgcaaacaa atcggcggcc gcccgggaaa acccgccccg aacgcgtccg gaaaatatgc
       61 ttatcgatgg aaaacgcagc cgcatccccc gccgggcgtt tcagacggca cagccgccgc
      121 cggaaatgtc cgacgcttaa ggcacagacg cacacaaaaa accgtatgcc tgcacctgca
      181 acaatccgac agataccgct gttttttcca aaccgtttgc aagtttcacc catccgccgc
      241 gtgatgccgc caccaccatt taaaggcaac gcgcgggtta acggctttgc cgtcggcaaa
      301 gcagccggat accgctacgt atcttgaagt attgaaaata ttacgatgca aaaagaaaat
      361 ttaagtataa tacagcagga ttctttaacg gattcttaac aatttttcta actgaccata
      421 aaggaaccaa aatatgaaaa aagcacttgc cacactgatt gccctcgcta tcccggccgc
      481 cgcactggcg gaaggcgcat ccggctttta cgtccaagcc gatgccgcac acgcaaaagc
      541 ctcaagctct ttaggttctg ccaaaggctt cagcccgcgc atctccgcag gctaccgcat
      601 caacgacctc cgcttcgccg tcgattacac gcgctacaaa aactataaag ccccatccac
      661 cgatttcaaa ctttacagca tcggcgcgtc cgccatttat gacttcgaca cccaatcgcc
      721 cgtcaaaccg tatctcggcg cgcgcttgag cctcaaccgc gcctccgtcg acttgggcgg
      781 cagcgacagc ttcagccaaa cctccaccgg cctcggcgta ttggcgggcg taagctatgc
      841 cgttaccccg aatgtcgatt tggatgccgg ctaccgctac aactacatcg gcaaagtcaa
      901 cactgtcaaa aacgtccgtt ccggcgaact gtccgccggt gtgcgcgtca aattctgata
      961 tgcgccttat tctgcaaacc gccgagcctt cggcggtttt gttttctgcc accgcaacta
     1021 cacaagccgg cggttttgta cgataatccc gaatgctgcg gcttctgccg ccctattttt
     1081 tgaggaatcc gaaatgtcca aaaccatcat ccacaccgac aaagcccccg ccgccatcgg
     1141 cgcgtacagc caagccgtcc gagcaggcga caccgtttac atgagcggtc aaatccccct
     1201 cgatcccgcc acgatgaccg tcgtcggcaa cggcgatttc cgcgccgaag cgcgccaagt
     1261 gttccaaaac ctgcaagccg tcgccgaagc ggcaggcggc acgctggccg acatcgtcaa
     1321 actcaacgcc tacctgaccg acttgggcaa ttttgccgtc ttcaacgaag tgatggcgga
     1381 atttattgcc gagcccttcc ccgcccgcgc cgccgtcggc gttgcctccc tgccaaaagg
     1441 cgtgcaggtc gaagccgaag ccgtcctcgt tttgaacgca taattccacg ttcggactgc
     1501 atgatatttc aaaaccatgc cgtccgaacc gcaacacttt cccacttcac aacatctgca
     1561 atggcacatt acgcaatcgg cgacatacaa ggctgtttcg acgaactgac cgcgctgctc
     1621 ggcaaaatcg gtttcaacca cggcacggac accctctggc tgacgggcga catcgtcaac
     1681 cgcggcccga aatccctcga aacgctgcaa ttctgcatcc ggcacgaaaa cagcgtgcaa
     1741 atcgtcctcg gcaaccacga cctgcacctg ctcgctgtcg gctgcggcga aggcgcgccc
     1801 aaacgcagcg acacaatcga acccatactc aaacaccccg acggaaaaaa aatgctcgac
     1861 tggctgcgtg cgcaaccgct gttgatacgc gagggcagcc gcgtgatggt acacgccggc
     1921 atcctgccgc aatggcgcat cgccaaagcc gaatcgctcg ctagagaagc cgaagccgaa
     1981 ctgcgcggca aaaaatacgt caaattcttc tccaaaatgt acggcaacaa accggccgcg
     2041 tgggacgaag gtttggaagg ctatgcccgc ctgcgcttca tcgtcaacgc cttcacgcgg
     2101 atgcgcgccc tgacctttaa aaacgaactg gatttcgact acaaatccac agtgaaaaaa
     2161 atgccgcctt acctgcgccc gtggttcaaa gcccccgacc ggcaaaacct cgaccgcacc
     2221 atcatcttcg gacactggtc ctcgctgggc tacacgaatg ccgacaacgt catctcgctg
     2281 gacaccggcg cgctgtgggg cggacagctg accgccgtca acctcgaaac ggaagaaatt
     2341 acccaagtcc aagccgccgg cggcatagac tggaaaagct tcgcaaaata acggaccgcc
     2401 ccactatgca caaaatcctg cccatcgccc acgtcctctc ccgactgggt atgctgtttt
     2461 cctttatcct gctgataccc gccgccctct cctacgcctt ttcggacggc gcgtacaccg
     2521 ccttcgccac caccgcgacc gttacccttt ccggctcgtg catcgtccgg ctcgccaccc
     2581 tccggttcag gcgcgaactg cgcccgcgcg acggcttcac cctcgtcctg atgttgtggc
     2641 tggcgtttgc cgctatggcg gcgatgccga tgtacctgta tttcccgaat atgggcttta
     2701 ccgacgcatt ttttgaatcg atgtcgggac tgaccaccac cggcgcgacc gtcatccccc
     2761 acgtcgacgg gctcgccccc tccgtcaact tttggcggca tatgctcaac tggctgggcg
     2821 ggatgggcat catcgtcctt gccgtcgcca tcctgcctat gctcgacgta ggcggcacgc
     2881 agttattcaa agccgaaatc cccggcattg acaaagaaag caaaatgtcg ccgcgcattt
     2941 cccaagtggc gaaaaaactt tggttcggct acaccctgat caccatcctc gcggcagcct
     3001 gcctgcattt tgccgggatg ggctggttcg atgccgtctg tcacgcgatg gcgaccctct
     3061 cgctgggcgg gttttccacc cacgatgcca gcatagctta ttacaactcc cccctcatcg
     3121 aagcggtcat catcgttttc accattgtcg gcggcatcaa ttttgccaac catttcgccg
     3181 ccctcaacag ccgcagcctc aaaacctatt ggaaagacga agaatgccgg acgatgctgc
     3241 tgctgctctc cggcagcatc cttgccgccg ccctgtacct gtggcacacc ggctattacg
     3301 ccggttttac cgaatccctg cgctacaccg ccttcaactt cgtctccatc ggactggcaa
     3361 acgggctggc caacaccgac ttcgcacaat ggccgctcct gatttccctg tggatgtttt
     3421 tcctcgccaa catcctcgcc aactccggct cgaccggcgg cggcatcaaa accatacgcg
     3481 ccctcgtcct gttcaaattc agcctgcgcg aaatgatggt gctgctgcac cccaaagccg
     3541 tccgcaccgt caaaatcagc ggcaaggcca tacccgaccg cctcgcgctg accgttatgt
     3601 ccttcatctt catctacttt atgaccgtcg tcctcttcag cttcctgctg atggcgagcg
     3661 gtatggaatt taccaccgcc ttcaccgccg tcatcgcctg catcaccaac gccggccccg
     3721 gcctgggcga agtcgggccc gccggcaatt acgccggttt ggacgtgatg cagaaatgga
     3781 tctgcgttac cgccatgctc ttgggcaggc tggaaatctt caccgtcttc atcctcttca
     3841 cccccgccta ctggaagaaa taaaaaatgc cgtctgaaaa cttttcagac ggcatattgt
     3901 cttttaaaaa agcggaagct ctacaaaagg aaagaaatgc tgaaacctct gataaatttc
     3961 aggatatttc tctaaggctt ttaatgcttt ttcttttgaa ataggcggat catagacatc
     4021 tatccccctt aagaaggcaa tgcccgttaa tgcatttttt tgatcatttg aaatgtaacc
     4081 ataattaacg actccaatta catcataaat ttcccctata ctcttatcaa aatcaatcaa
     4141 atcaaaaata tacaatggaa ttgtatcaat aggagtatct ctgacaacta tatccaacca
     4201 taatttaaat tcagaaagat taatagcatc atagaacata cagactattg caaatcctaa
     4261 atcttcacaa ttttctt
//
LOCUS       DAWKJW010000158         4262 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.158, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000158 DAWKJW010000000
VERSION     DAWKJW010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4262)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4262)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4262
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.158"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            539..2266
                     /gene="ilvB"
                     /locus_tag="WJJ54_001683"
     CDS             539..2266
                     /gene="ilvB"
                     /locus_tag="WJJ54_001683"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HEZ7342523.1"
                     /translation="MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKH
                     ILTRHEQAAVHAADAYARVSGKVGVALVTSGPGVTNALTGIATAYTDSIPMVVISGQV
                     GNSLIGTDAFQEVDTVGITRPCVKHNFLVTDINELAETIKKAFQIAASGRPGPVVVDV
                     PKDVTQAMAKFSYPQEDIFIRSYQPVVQGHIGQIKKAVQMLASAKRPVVYFGGGVVLG
                     NASEELTRFVRMTGAPCTGTLMGLGAYPSGDRQFLGMLGMHGTYEANLAMQNADVVLA
                     VGARFDDRVVSVPSKFFEKAKKVIHIDVDPSSIAKRVKADIPIVGDVKNVLSEMVALW
                     QKQEFMPSEDALGKWWKTIEEWRSRDCLWFDNGSEIIKPQYVIQKLAEITGNSAIITS
                     DVGQHQMFAAQYYPFERPRQWLNSGGLGTMGVGLPYAIGAKLAAPDQDVFCITGDGSI
                     QMNIQELSTCFQYRIPVNVITLNNGYLGMVRQWQEIYYGGRESETYFDSLPDFVKLAE
                     AYGHIGIRVDKKSDVEGALLEALNQKDRLVFIDFLTDQKQNVMPMVGNGKGLDEMVLP
                     PHMRADGKA"
     gene            2277..2768
                     /gene="ilvN"
                     /locus_tag="WJJ54_001684"
     CDS             2277..2768
                     /gene="ilvN"
                     /locus_tag="WJJ54_001684"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEZ7342524.1"
                     /translation="MRHILSVLIENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLS
                     RMTIVTHGDEQVIEQITKQLNKLIEVIKVVDLNESRFVERELMLVKVRAAGKDRDEFL
                     RLTEIYRGSIIDVTDRSYTIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERI
                     LKI"
     gene            2835..3128
                     /locus_tag="WJJ54_001685"
     CDS             2835..3128
                     /locus_tag="WJJ54_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEZ7342525.1"
                     /translation="MSNIKIVALVTVKPEYTETLAAQFKELVKASRAEEGNISYDLHQ
                     EIGKPNRFVFVENWKSQAAIDEHNASAHFQAFVQSVDGKTEALEIVLMNEVAD"
     gene            3208..4221
                     /gene="ilvC"
                     /locus_tag="WJJ54_001686"
     CDS             3208..4221
                     /gene="ilvC"
                     /locus_tag="WJJ54_001686"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEZ7342526.1"
                     /translation="MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVI
                     GLRQGSSWKKAEAAGHVVKTVAEATKEADVVMLLLPDETMPAVYHAEVAANLKEGATL
                     AFAHGFNVHYNQIVPRADLDVIMVAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAK
                     DIALSYAAANGGTKGGVIETTFREETETDLFGEQAVLCGGVVELIKAGFETLTEAGYA
                     PEMAYFECLHEMKLIVDLIFEGGIANMNYSISNNAEYGEYVTGPEVVNASSKEAMRNA
                     LKRIQTGEYAKMFIQEGNVNYASMTARRRLNADHQVEKVGAQLRAMMPWITANKLVDQ
                     DKN"
BASE COUNT         1107 a         1020 c         1077 g         1058 t
ORIGIN      
        1 aatcaatata ttaagtcgtt gttagccctc ttggttctgt caatgccgtc caatacagtc
       61 cggtgcaatg agccattttc aggaagtatg gttgggaata tttttgatat atcaaaaata
      121 aaatcaagtt caatcaatat cccgagtctt tattgggatg aaaccctgta aattttacaa
      181 ttcttgatat cgaagaaggg tttttcacat ctgcccctcc tacacaaact gtcaacaatt
      241 tccatctttc aaaaaaggta ctcctgattt cattctttta aaatcaatca ataatttctc
      301 tgctttcaaa aaatattaaa agatgaaaga tttttcttga ttgaactgtc ggtttgcgtt
      361 atcgtttcta ctctttttca caaactctgt gttcctttcc aattgattgg ataatccgtc
      421 tgttgccgtg ttcccccaat gcgcgtaccc taaatcgctg cttggtggaa ttgcattaca
      481 ggtgctgtgg caaagcggtt tgtccctatt ggtttgaaac cgtataaaag aggtcgttat
      541 gcagttatca ggcgcgcaaa tcatagtgca gagtctcaaa gccgaaggtg tcgagtacgt
      601 tttcggttat cccggcggtg cggttatcga aatctacgat gcccttttcc aactcaataa
      661 attcaagcac attctgaccc gtcacgagca ggcggcagta cacgcggcag atgcgtatgc
      721 gcgcgtcagc ggtaaggtgg gcgtggcatt ggttacatcc ggcccgggcg ttaccaatgc
      781 gctgaccggt attgctactg cctatacgga ttcgattccg atggtggtca tcagcgggca
      841 ggtaggcaat tccctgattg gtacggatgc gttccaagaa gttgatacgg tgggtattac
      901 ccgtccgtgc gtcaaacaca atttcctggt tacggacatc aatgagttgg cggaaaccat
      961 taaaaaggcg ttccaaattg ccgcaagcgg ccgaccgggg cccgtggtgg ttgatgtccc
     1021 gaaagatgtt acgcaggcga tggcgaaatt cagctatcct caggaagaca tttttatccg
     1081 ttcgtatcaa ccggttgttc aagggcatat cggtcagatt aaaaaggccg tgcagatgtt
     1141 ggcatctgcc aaacgtccgg tcgtctattt tggcggcggc gtggtgttgg gtaatgcttc
     1201 tgaagagctg acccgatttg tccgaatgac gggtgctccg tgcacgggta cgctgatggg
     1261 cttgggcgct tatccttccg gcgaccgcca attcctcggt atgctcggta tgcacggtac
     1321 ttacgaggca aaccttgcca tgcagaatgc ggatgtcgtt cttgccgtag gtgcgcgttt
     1381 tgacgaccgt gtggtttccg taccgtccaa atttttcgag aaggcgaaga aagttatcca
     1441 tatcgatgtc gatccttcca gcatcgccaa acgcgtgaag gcggacattc cgattgtcgg
     1501 cgacgtgaaa aatgttttgt ctgagatggt tgcgctgtgg caaaaacaag agttcatgcc
     1561 gtctgaagat gctttgggca aatggtggaa aaccatagag gaatggcgtt cccgcgattg
     1621 cttgtggttt gacaacggca gcgaaattat caagccacaa tatgtgattc agaagcttgc
     1681 cgagattacc ggcaattcgg caatcatcac atcggatgta gggcagcatc aaatgtttgc
     1741 ggctcaatat tatcccttcg aacgtccgcg ccaatggctc aactccggcg gtttgggtac
     1801 gatgggcgtg ggtctgcctt atgcgattgg tgcaaaactt gccgccccgg atcaagacgt
     1861 attctgtatc accggcgacg gctcgattca gatgaacatc caagagttgt ccacctgttt
     1921 ccaatatcgg attccggtta acgtcattac gctgaacaac ggttatctcg gtatggtacg
     1981 ccagtggcag gaaatatatt acggcggccg agagtcggaa acttatttcg attctttgcc
     2041 cgatttcgtc aaacttgccg aggcatacgg ccatatcggt atccgcgtgg acaagaagtc
     2101 tgatgtggaa ggtgccttgt tggaagcatt gaaccaaaaa gacaggctgg tgtttatcga
     2161 cttcctgact gaccagaaac agaatgtgat gcctatggtc ggcaacggca aaggtttgga
     2221 cgaaatggta cttccgccgc atatgcgtgc ggacggaaag gcgtaaggag agacaaatgc
     2281 gacatatctt atctgttctg atcgaaaacg aatcaggtgc gatgagccgc gtggtcggtt
     2341 tgttctctgc acgcgattac aatatcgatt ctttggcggt tgcgccgacc gaagacaaaa
     2401 ccctgtcccg tatgaccatc gttacccacg gcgacgagca ggttatcgaa caaatcacca
     2461 agcaactcaa taaattgatt gaagtgatta aagtggtcga tttgaacgaa agccgttttg
     2521 tcgaacgaga actgatgttg gtaaaagtcc gtgccgccgg caaagaccgc gacgaatttt
     2581 tgcgtttgac cgaaatctac cggggcagca tcatcgacgt aaccgaccgc agctatacga
     2641 ttgaaattac cggctcgacc gacaagctgg attccttttt ggaaacggtc ggacgcgccc
     2701 aaattttgga aaccgtacgt acaggcgcgg ccggcatcgg tcgcggtgag cgtattttga
     2761 aaatttaacg ccgtaacctt tcagacggca cggtatttga atgccgtctg aaaaacgaac
     2821 ggcaggagag atttatgtcg aacattaaaa ttgtcgcact ggttaccgtc aaaccggaat
     2881 acacagaaac actggcagca cagtttaaag aactggtcaa agccagccgt gcagaagagg
     2941 gcaacatcag ctacgatctc catcaggaaa tcggcaaacc gaaccgtttt gttttcgtgg
     3001 aaaattggaa atctcaagca gctattgacg aacataacgc cagcgcgcat ttccaagcct
     3061 tcgtccagtc cgtcgacggc aaaaccgaag cgttggaaat cgtattgatg aatgaagttg
     3121 ccgattaagc ggcacactct gtttaacccg tccgaagccg ctcaacattt taaggcttcg
     3181 acaaccattt accttaaagg aaatcaaatg caagtctatt acgataaaga tgccgatctg
     3241 tccctaatca aaggcaaaac cgttgccatc atcggttacg gttcgcaagg tcatgcccat
     3301 gccgccaacc tgaaagattc gggtgtaaac gtggtgattg gtctgcgcca aggttcttct
     3361 tggaaaaaag ccgaagcagc cggccatgtc gtcaaaaccg ttgctgaagc gaccaaagaa
     3421 gccgatgtcg ttatgctgct gctgcctgac gaaaccatgc ctgccgtcta tcacgccgaa
     3481 gttgcagcca atttgaaaga aggcgcaacg ctggcatttg cacacggctt caacgtgcac
     3541 tacaaccaaa tcgttccgcg tgccgacttg gacgtgatta tggttgcccc caaaggtccg
     3601 ggccataccg tacgcagtga atacaaacgc ggcggcggcg tgccttctct gattgccgtt
     3661 taccaagaca attccggcaa agccaaagac atcgccctgt cttatgcggc tgccaacggc
     3721 ggcaccaaag gcggtgtgat tgaaaccact ttccgcgaag aaaccgaaac cgatctgttc
     3781 ggcgaacaag ccgtattgtg cggcggcgtg gtcgagttga tcaaggcggg ttttgaaacc
     3841 ctgaccgaag ccggttacgc gcctgaaatg gcttacttcg aatgtctgca cgaaatgaaa
     3901 ctgattgttg acctgatttt cgaaggcggt attgccaata tgaactactc catttccaac
     3961 aatgcggagt acggcgaata cgttaccggc cctgaagtgg tcaatgcttc cagcaaagaa
     4021 gccatgcgca atgccctgaa acgcattcaa accggcgaat acgcaaaaat gtttatccaa
     4081 gagggtaatg tcaactatgc gtctatgact gcccgccgcc gtctgaatgc cgaccaccaa
     4141 gttgaaaaag tcggcgcaca actgcgtgcc atgatgcctt ggattactgc caacaaattg
     4201 gttgaccaag acaaaaactg attgttttca aacgggacta cctacacatc gtgtaggcag
     4261 tt
//
LOCUS       DAWKJW010000159         4198 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.159, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000159 DAWKJW010000000
VERSION     DAWKJW010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4198
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.159"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(222..1085)
                     /gene="rpoH"
                     /locus_tag="WJJ54_001687"
     CDS             complement(222..1085)
                     /gene="rpoH"
                     /locus_tag="WJJ54_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HEZ7342527.1"
                     /translation="MNNAFALPAIQSGNGSLEQYIHTVNSIPMLSQEEETRLAERRIK
                     GDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPGRGARLF
                     SFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLNALSPKEAQDIADD
                     LGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPIDWLADHDSEPSRQLSKQAHYAL
                     QTEGLQNALAQLDDRSRRIVESRWLQDDGGLTLHQLAAEYGVSAERIRQIEAKAMQKL
                     RGFLTEEAEAV"
     gene            complement(1349..2887)
                     /gene="lnt"
                     /locus_tag="WJJ54_001688"
     CDS             complement(1349..2887)
                     /gene="lnt"
                     /locus_tag="WJJ54_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEZ7342528.1"
                     /translation="MVSKLDKYWQHPALYWPLLILFAAATPFTFAPYYHFWLMPLIFG
                     AFVRLIELRPRFAVSSAYLFGLTAYTTQFYWIHTALHDVSGLPDLYAVPLTFLLPAYL
                     ALYPALCFWLWKKFTLPRGIKIGLVLPILWTLTEFARERFLTGFGWGAIGYSQITPDS
                     PLAGFAPLGGIHMVTLATAFLGVWLVLASDNTARSGKRLLPIILIAALLAAGYTARQT
                     DFTRPDGSRSTVALLQGNIDQTLKWREDQVIPTIQKYYEQVGKTTADIVILPETAIPV
                     MRQNLPENILAKFAEQAQNNGSALAVGISQYTSDGNGYENAVINLTGYQENNQDGIPY
                     YAKNHLVPFGEYKPLPFLTTPLYKMMNMPLSDFRKGGGKQSALLMKNQKIAFNICYED
                     GFGDELIAAAKDATLLANASNMAWYGKSNAMYQHLQQSQARAMELGRYMVRATNTGAT
                     AIISPKGNIIAQAQPDTETVLEGHIKGYVGETPYMKTGSSWWLMGILTLAALILFIFR
                     NKEH"
     gene            complement(2956..3324)
                     /locus_tag="WJJ54_001689"
     CDS             complement(2956..3324)
                     /locus_tag="WJJ54_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
                     /protein_id="HEZ7342529.1"
                     /translation="MAAIGIGMTVLVYGIVAVIVKLDDLGMLLMRRPQTFSRSLGQML
                     TAFMPCFMRGLSVVGTLAMFLIGGVLVAHNLGLLHDFLHAQHWDAGWAEYFANLVVGL
                     LSGSIACAPALPLMNRFGRH"
     gene            complement(3224..3682)
                     /locus_tag="WJJ54_001690"
                     /pseudo
     CDS             complement(3224..3682)
                     /locus_tag="WJJ54_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237797.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
     gene            3876..4196
                     /locus_tag="WJJ54_001691"
     CDS             3876..4196
                     /locus_tag="WJJ54_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium:proton antiporter"
                     /protein_id="HEZ7342530.1"
                     /translation="MDWMGSLFLPGGALLFLSVVSTTLSACLGMPLLLVSPAGVLDGA
                     AEALAIAAFLMLVARPPAVFGGLWKFNYSLREKAYSRIEMQSDTVLQAGIWRGTSCPT
                     ARSI"
BASE COUNT          909 a          965 c         1303 g         1021 t
ORIGIN      
        1 cgccttgtcc tgatttttgt taatccacta tatcaatttc gccaatctgt cggaaaagca
       61 gctgatgcgg cagtgtctgg tgcatgtctg ctttttgatt tcggcaattg caacggcgtg
      121 gacggataaa atcgtgtaca gcacgacgca caaaccgcat tgatgtttac caaataaaat
      181 acccgacaaa acaatttgtc gggtatttta ttgcgtatat ttcaaaccgc ttcggcttct
      241 tcggtcagga aaccacgcag tttctgcatg gcttttgctt caatctggcg gatgcgctcg
      301 gcagagacgc cgtattctgc agcaagctgg tgcagcgtca gcccgccgtc gtcttgaagc
      361 cagcggcttt ccacaatacg gcggctcctg tcatccagtt gcgccaaagc gttttgtaaa
      421 ccttctgttt gcagggcgta atgcgcctgt ttcgatagtt gccggctcgg ttcggaatcg
      481 tggtcggcaa gccagtcgat gggggcgaaa ctgtcctcgt cgtcgctgtt gtctgccatg
      541 atggcgatgt cgtgtcccgt catgcgctgt tccatttcca gaacttcgga aagtttgaca
      601 cccaaatcgt cggcgatgtc ttgtgcctct ttgggagaca gggcgttgag gtttttacgc
      661 atactgcgta aattgaaaaa cagcttgcgt tgcggtttgg tggtggcaac gcgaaccaaa
      721 cgccagtttc tcaaaataaa ctcgtggatt tcggctttaa tccagtgtac ggcaaatgaa
      781 aacagacgcg cgcctctacc gggctcgtag cgtttgaccg ccttcatcag tccgatattg
      841 ccttcctgaa tcaggtctgc ctgattcagc ccgtagccgt catagccgcg cgcgatggaa
      901 acgacgacgc gcaggtggga caggatgagt tgtttggcgg cgttgaggtc gccctttatc
      961 cggcgttcgg cgaggcgggt ttcttcttcc tgggacagca tcgggatgct gttgacggtg
     1021 tggatgtatt gttcgaggct gccgttgccg ctttggatgg cgggtaatgc gaaagcgtta
     1081 ttcatttggg gcatttcctt tcggctgaaa ctgcgtatcg gcggtttgct gtgttgggat
     1141 gcagtatatc actgcttggc ttgtattttg tatgtttggc aggagatatg cgctaaggtt
     1201 tgaaagacag gaaaattttg taaggcaggt ttgattgatt ttgtaaacct gatggctcaa
     1261 tccgatttcg gaattatatt acatacgtag ttgtatgtaa acagccggtt tgaaaaaaga
     1321 cagcccgtcc ggacgggctg tgcaggtatc agtgttcttt gtttcggaag atgaaaagaa
     1381 tcagtgcggc tagggtcaat atgcccatca accaccatga actgccggtt ttcatatagg
     1441 gtgtttcgcc gacatagcct ttgatgtgtc cttccaatac ggtttccgta tcgggttggg
     1501 cttgggcgat gatgttgcct ttgggggaga tgatggcggt tgcgccggtg ttggtggcac
     1561 ggaccatata gcgtccgagt tccatagccc gtgcctgcga ttgttggagg tgctggtaca
     1621 tggcgttgga ttttccgtac cacgccatat tgctggcatt ggcaagcagg gtggcatctt
     1681 tggcggcggc aatcagttcg tcgccgaatc cgtcttcgta acagatgttg aaggcgattt
     1741 tttggttttt catcagcagg gcggattgct taccgccgcc tttgcggaag tcggaaaggg
     1801 gcatattcat cattttgtaa agcggcgtgg tcaggaaggg cagcggtttg tattcgccga
     1861 aggggacgag gtggtttttg gcgtagtagg ggatgccgtc ctgattgttt tcctgataac
     1921 cggtcaggtt gatgacggcg ttttcgtaac cgttgccgtc cgaagtgtat tggctgatgc
     1981 cgacggcgag cgcgctgccg ttgttttgcg cctgttcggc aaattttgcc agtatgtttt
     2041 ccggcaggtt ttggcgcata acggggatgg cggtttcggg caggatgacg atgtcggcag
     2101 tggttttgcc gacctgttcg taatatttct gtatggtcgg gatgacttgg tcttcacgcc
     2161 atttgagggt ttggtcgatg ttgccttgaa gcagggcgac ggtgctgcgg ctgccgtcgg
     2221 ggcgggtgaa gtcggtttgt cgggcggtgt agcctgcggc aagcagggcg gcaatcagga
     2281 taattggaag caggcgtttg cccgaacgtg cggtgttatc actcgccaaa accagccaga
     2341 caccgagaaa ggcggttgcc agtgtaacca tgtggatgcc gcccaatggg gcaaagccgg
     2401 cgagcgggct gtccggggtg atttgggagt agccgattgc gccccagccg aatccggtca
     2461 ggaaacgctc gcgggcaaac tcggtcagcg tccacaggat gggcagtacc aaaccgattt
     2521 ttatgccccg aggcagggta aattttttcc acagccagaa acacagtgcc ggataaaggg
     2581 caaggtaggc ggggagtagg aaggtcagcg gtacggcata gaggtcgggc aggccggaaa
     2641 cgtcgtgcag ggcggtgtgt atccagtaga actgtgtcgt gtatgcggtc aggccgaaca
     2701 ggtaggcgga agagacagca aaacgcggac gcagttcgat gaggcggacg aaggcaccga
     2761 aaatcaaggg catcagccaa aagtggtagt agggtgcgaa ggtaaagggg gtggcggcgg
     2821 caaaaaggat gagcaaaggc cagtagaggg cggggtgctg ccagtatttg tccagtttgg
     2881 aaaccatatt catctgtctg ttcggaagat accgtctgaa catctttcaa acggcatcgg
     2941 tatttgaaaa agaaatcaat gcctgccgaa acgattcatc agcggcaagg cgggggcgca
     3001 ggcaatcgaa ccggaaagca gcccgacaac gaggttggcg aagtactccg cccagccagc
     3061 gtcccagtgt tgcgcgtgca ggaaatcgtg cagaaggccg aggttgtggg cgaccagtac
     3121 gccgccgata agaaacatgg caagcgtgcc gaccacgctc aaaccgcgca taaagcaagg
     3181 cataaaggca gtcagcattt gccccaaact gcgcgaaaag gtttgtgggc ggcgcatcag
     3241 cagcatgcct aagtcgtcga gtttgacgat gacggcaacg attccgtaca ccaaaacagt
     3301 catgccgatg ccgattgccg ccattacgag catgcgcgtc atgtcggtgc agaaacttgt
     3361 gcagcagctt ttctacgcct tcaaagcaca gataaatgcc gcctgccgtc aaaagcggcg
     3421 taatgagttg cggcaggaag gcggaaagca gcagggccgc aggcaccaaa accggcttgt
     3481 tggaaaaaga acctttcgcc atcgaccaaa caatcggcaa ctcgcgttct gccgatacgc
     3541 ccgtaacccg gttggcattg ggtgccaaat cgtcgccgac catgccggcg gttttctttg
     3601 cggcggcttt ggtcatcagg gcaacatcgt ccaaaacggc ggtgatgtcg tccggcaggg
     3661 taaatagtga ggcaaatgcc attaaagaat cctgaaatgc ggcgcaaagt ccgacattat
     3721 ataggagaac gcggatttgg gcggtttcag gcggcatgaa acaggaaaat gccgtctgaa
     3781 ggcggtggcg gacgtgaagt aaagtttcgt gaaaaaaatg ccgtgttaca gtctttcgat
     3841 tttaatttaa tgaattttaa gggagaatcg ttagcgtgga ttggatgggc agtctgttcc
     3901 tgccgggtgg cgcactgttg ttcctgagcg tggtttcgac cactttgtcc gcatgtttgg
     3961 gaatgccttt gctgctggtt tctcccgccg gcgtgttgga cggggcggcg gaagccttgg
     4021 cgattgcggc gttcctgatg ctggtcgcgc gtccgccggc agtgttcggc ggtttgtgga
     4081 aattcaatta cagcctgcgt gaaaaggcgt atagccgaat agaaatgcag tccgacaccg
     4141 tgcttcaggc ggggatttgg cgtggtacat cctgcccgac ggcaaggtcg atatagtg
//
LOCUS       DAWKJW010000160         4151 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.160, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000160 DAWKJW010000000
VERSION     DAWKJW010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4151
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.160"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..176
                     /locus_tag="WJJ54_001692"
     CDS             <1..176
                     /locus_tag="WJJ54_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342531.1"
                     /translation="LVLIFVNPLYNVGIGSGALLGHWVTQYSGISCIGIAGMLVSAAG
                     LWVCLNLNRHIRT"
     gene            305..1741
                     /locus_tag="WJJ54_001693"
     CDS             305..1741
                     /locus_tag="WJJ54_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HEZ7342532.1"
                     /translation="MPLLSVEFALFFLAFLPIYWGLAKYPSAQNLLLLAAGMGWLYHI
                     GPVFAAIIVLYSSCVYLLGELLRSDRENTRRFWLGCGIAASLTVLGFFKYFDFFRPLI
                     AQYAGKGGAIDILMPLGLSYYTFQSLAYLVYCFRAPHAARFSWHELLLHLSFFPTVTS
                     GPIIRAAAFKSADGEQAGALAQIRTRQPRSPVRPALAVSLILLGIAKKWWLAGMLAEN
                     WVSPVFENPAQFNGWGVLGSVYGYTFQLFLDFSGYSDLVIGMAMLLGFRLPKNFSAPL
                     RALNIRAFWDKWHISLSTWIRDYIYIPLGGSKKGFLRTQLNLMAAMVLSGIWHGYGWN
                     FLIWGTLHGTALVLLNTGDRYFGRDALCRLKYLAPLSWLITFHFVCLTFVVFNTASPD
                     DAGAVFTALFANANGWNAPQQADMLLLTSFASVMLLYPYLQRAFDGVVKGLEKIPMWL
                     WFIPVSAVLLLIIVLAPSGIPGFIYANF"
     gene            1752..2738
                     /locus_tag="WJJ54_001694"
     CDS             1752..2738
                     /locus_tag="WJJ54_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HEZ7342533.1"
                     /translation="MKNFLSLFASILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLA
                     AYGWWRSGVALQENAYALSDGIKAFLSGETPPTAQDGGSADMPSEAAASEAVPQTGEI
                     QEWKQNTDTAAVRSGDKVFFAGDSLMQGVAPFVQKSLKQQYGIESVNLSKQSTGLSYP
                     SFFDWPKTIEETLKKHPEISVLAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDR
                     ILEAAHTHYVQVVWLGIPYMKKAKLDGQMRYLDKLLSEYLKGKIILIPTAHTLSGGKD
                     RYTDSVNVNGKPVRYRSKDGIHFTAEGQKLLAAKIMEKIVFEPSTQPSSTQP"
     gene            2735..3928
                     /locus_tag="WJJ54_001695"
     CDS             2735..3928
                     /locus_tag="WJJ54_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEZ7342534.1"
                     /translation="MNPKHLIAFSALFAATQAEALPVASVSLDTVTVSPSAPYTDTNG
                     LLTDYGNASASPWMKKLQSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDG
                     GIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNSGDFPLGGILAHTGSGGSMTLTASDG
                     IASKQRVSLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTGAALPLTIHTEMPWDIGFI
                     NIENPAGGITVSAMGINGAQLTQWSKWRADRMNDLAQTGADLVILAYGTNEAFGDNID
                     IADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRIA
                     RQGQTMFWSWQNAMGGVCSMKNWLNHGWAAKDGVHFSAKGYQRSAEMLADSLEELVRA
                     AAIRQ"
BASE COUNT          896 a         1351 c         1044 g          860 t
ORIGIN      
        1 gccttgtcct gatttttgtt aatccactat acaacgtcgg tatcggcagc ggcgcactgt
       61 tgggacattg ggtaacgcaa tactcgggca tttcctgcat cggcattgcc ggtatgctgg
      121 tatcggcggc aggtttgtgg gtctgcctga atttgaaccg ccatattcga acctgaccgc
      181 gcgatgccgt ctgaagcccc tcccgccctt cagacggcat tttgattgaa gaaatatccg
      241 cccctgctta aaataacagg ctttgccgtg ttttaacgcc tattttttgt tccaaggatg
      301 gtttatgccg ttgctgtctg tcgagttcgc actgttcttt ctcgctttcc tgccgattta
      361 ctggggcttg gcgaaatacc cgtccgccca aaacctgctg cttctggctg ccggtatggg
      421 ctggctctac catatcggcc ccgtatttgc ggcaatcatc gtcctttatt cctcctgcgt
      481 gtaccttttg ggcgaactgc tccgttccga tcgcgaaaat acgcgccgct tttggctggg
      541 gtgcggcatt gccgcctcgc tgaccgtctt gggctttttc aaatatttcg actttttccg
      601 gccgctgatt gcccaatatg ccggaaaagg cggcgcaatc gacatcctga tgccgctggg
      661 gctttcgtat tacaccttcc agtcgctcgc ctatcttgtt tactgcttcc gcgccccgca
      721 cgccgcgcgt ttcagctggc acgagctgct gctgcacctg agttttttcc ccaccgttac
      781 ctccggcccg attatccgcg ccgccgcatt caaaagcgca gacggcgagc aggcaggcgc
      841 attggcgcaa atccgtaccc gccaaccgcg ctcacccgtc cgccccgcac tcgccgtttc
      901 cctgattctg ctgggtattg ccaaaaaatg gtggctggcg gggatgctcg cagaaaactg
      961 ggtgtcgccc gtgtttgaaa accccgccca attcaacggc tggggcgtat tgggcagcgt
     1021 gtacggctat accttccaac tcttcctgga cttttccgga tattccgatt tggttatcgg
     1081 catggcaatg ctgctgggct tccgactgcc caaaaacttc tcagcaccgc ttcgtgcttt
     1141 aaacatccgc gcattttggg acaaatggca catcagcctt tccacctgga tacgcgacta
     1201 catctacatc cccttgggcg gcagcaaaaa aggctttttg cggactcagc tcaacctgat
     1261 ggcggcaatg gtgctctcag gcatctggca cggctacggc tggaacttcc tcatttgggg
     1321 cacgctgcac ggcacggcac tggtgctgct caacacgggc gaccgctatt tcggacgcga
     1381 cgcgctatgc cgtctgaaat acctcgcgcc gctctcgtgg ctcatcacct tccattttgt
     1441 ctgcctgacc tttgtcgtct tcaataccgc aagccccgac gatgcaggcg cggttttcac
     1501 tgccctcttt gccaatgcca acggctggaa tgcgccgcaa caggcagaca tgctgctgct
     1561 tacctcgttt gcatccgtca tgctgctcta cccttacctg caacgcgctt tcgacggcgt
     1621 ggtcaaaggt ttggaaaaaa tcccgatgtg gctgtggttt atccccgttt ccgccgtcct
     1681 gctgctgatt atcgtattgg ccccctcggg gatacccggc tttatttatg ccaattttta
     1741 agggtttgga catgaaaaac tttctttccc ttttcgcctc catactgatg tctgccctga
     1801 ttgccgtgtg gttcagccaa aaccccatca acgcctactg gcagcagacc taccaccgca
     1861 acagcccgct cgaaccgctc gccgcctacg gatggtggcg gagcggtgtg gcgttgcaag
     1921 aaaacgccta cgccctttca gacggcatca aagccttcct gtccggcgaa acgccgccga
     1981 cggctcaaga cggcggttcg gcagatatgc cgtctgaagc cgccgcatcc gaagccgtcc
     2041 ctcaaaccgg tgaaatccaa gaatggaaac agaacaccga caccgccgcc gtccgcagcg
     2101 gcgacaaagt ctttttcgcc ggcgactcgc tgatgcaggg cgttgccccc ttcgtgcaaa
     2161 aaagcctgaa acagcaatac ggcatcgaat ccgtcaacct cagcaaacaa agcacggggc
     2221 tgtcctaccc ctcattcttc gactggccga aaacgattga agaaaccctg aaaaaacatc
     2281 ccgaaatcag cgtgctcgcc gtcttcctcg gtccgaacga cccgtgggat ttccccgttg
     2341 gcaaacgcta cctcaaattc gcttccgacg aatgggcgca agaatacctg aaacgcgtcg
     2401 accgcatcct tgaagccgca cacacgcact acgtccaagt cgtctggctc ggcatcccct
     2461 acatgaaaaa agccaagctc gacggacaga tgcgctacct agacaaactg ctttcggaat
     2521 atttgaaagg caaaatcatc ctgattccca ccgcgcacac cctgagcggc gggaaagacc
     2581 gctacaccga ctccgtcaac gtcaacggca aacccgtccg ctaccgcagc aaggacggca
     2641 tacactttac cgccgaagga caaaaactgc tggcggcaaa aataatggaa aaaatcgttt
     2701 ttgaaccaag tacgcaacca tcaagtacac agccatgaac cccaaacacc tcatcgcatt
     2761 ttccgcccta ttcgccgcca cgcaggcaga agccctacct gtcgcctccg tcagcctcga
     2821 caccgttacc gtttccccgt ccgcccccta caccgataca aacgggctgc tgaccgacta
     2881 cggcaacgcc tccgcctcgc cttggatgaa aaaactccaa tccgtcgcac aaggcagcgg
     2941 cgagaccttc cgtatcctgc aaatcggcga ctcgcatacc gccggcgact tctttaccga
     3001 cagcctgcgc aaacgcctgc aaaaaacttg gggcgacggc ggcataggct gggtttaccc
     3061 cgccaacgtc aaagggcagc gcatggcggc agtccggcac aacggcaact ggcaaagcct
     3121 caccagcagg aacaatagcg gagacttccc gctcggcggc atcctcgccc acaccggcag
     3181 cggcggcagc atgaccctga ccgcatcgga cggcatagca agcaagcagc gcgtttccct
     3241 gtttgccaaa cccctgcttg ccgaacaaac cctgaccgtc aacggcaaca ccgtctccgc
     3301 caacggcggc ggctggcagg tactggatac gggcgcggca ctgcccctga ccatacacac
     3361 cgaaatgccg tgggacatcg gcttcatcaa catcgaaaat cccgccggcg gcattaccgt
     3421 ttccgcgatg ggcatcaacg gcgcacaatt aacccagtgg tcgaaatggc gtgccgaccg
     3481 tatgaacgac cttgcccaaa ccggcgccga tctagtcatc cttgcctacg gtaccaacga
     3541 agccttcggc gacaacatcg acattgccga taccgaacag aaatggctgg ataccgtccg
     3601 ccaaatccgc gacagcctac ctgccgccgg catcctcatc atcggcgcgc ccgaatccct
     3661 gaaaaacacg ctcggcgtat gcggcacacg ccccgtccgc ctgaccgaag tccaacagat
     3721 gcagcggcgc atcgcccgtc aggggcagac gatgttctgg tcttggcaaa acgcgatggg
     3781 cggcgtttgc agcatgaaaa actggctcaa ccacggatgg gccgccaaag acggcgtaca
     3841 cttttccgcc aaaggctacc aacggtcggc ggaaatgctc gccgacagcc tcgaagaact
     3901 cgtccgcgcc gctgcaatca ggcaataatc ggacaggagg cggacggtat ttccgcaaca
     3961 gggggatgcc gtctgaaacg cataccttca tattgcttca gacggcatag ccaccccgcg
     4021 cacggtttgc cggacgcaac cggcattcgc ctcaagcatc ggaaggacgg gggcgaacct
     4081 ccggcatacg gcgcaaaggc ggcgtttgat atgccgtctg aaggcaaaga tgataaactg
     4141 ccgccttccg t
//
LOCUS       DAWKJW010000161         4127 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.161, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000161 DAWKJW010000000
VERSION     DAWKJW010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4127)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4127)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4127
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.161"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            43..675
                     /locus_tag="WJJ54_001696"
     CDS             43..675
                     /locus_tag="WJJ54_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEZ7342535.1"
                     /translation="MENTNRVPEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHA
                     DYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSVGLNIVLPHEQKPNPY
                     QDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPIVLVG
                     KAFWSGLAEWINAQLLARGLISEGAVSLFAISDDEDEIVAYLSEHGLQTA"
     gene            747..2117
                     /gene="purB"
                     /locus_tag="WJJ54_001697"
     CDS             747..2117
                     /gene="purB"
                     /locus_tag="WJJ54_001697"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEZ7342536.1"
                     /translation="MINPIASLSPLDGRYAQSVEALRPIFSEYGLMKARVKVELNWLK
                     ALAAEPKIAEVPPFSAETLAEIDTVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKER
                     FSGVPEVAAASEFIHFACTSEDINNLSHALMLQEAREAVLLPKLAEIIEKLTGMAHEL
                     AAVPMMSRTHGQPATPSTLGKEIANVVYRLQRQFKNLQAQEFLGKINGAVGNYNAHMV
                     AYPDVDWETHCRNFVEISLGLTFNPYTIQIEPHDYMAEFFQAISRVNTILIDFNRDVW
                     GYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLSEKLPISRWQ
                     RDLTDSTVLRNMGVGVGYAVLGFAAHLRGLNKLEPNPAALAADLDATWELLAEPIQTV
                     MRRYGVANPYEKLKDLTRGKDGITPEVLKLFIESLEIPAEAKAKLLELTPALYVGKAE
                     ALAKRI"
     gene            2197..4065
                     /locus_tag="WJJ54_001698"
     CDS             2197..4065
                     /locus_tag="WJJ54_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ7342537.1"
                     /translation="MQAVRYRPEIDGLRAVAVLSVIIFHLNDRWLPGGFLGVDIFFVI
                     SGFLITGIILSEIQNGSFSFRGFYTRRIKRIYPAFIAAVSLASVIASQIFLYEDFNQM
                     RKTVELSAVFLSNIYLGFQQGYFDLSADENPVLHIWSLAVEEQYYLLYPLLLIFCCKK
                     TKSLRVLRNISIILFLILTATSFLPSRFYTDILNQPNTYYLSTLRFPELLAGSLLAVY
                     GQTQNGRRQTASGKRQLLSLLCFGALLACLFVIDKHNPFIPGMTLLLPCLLTALLIRS
                     MQYGTLPTRILSASPIVFVGKISYSLYLYHWIFIAFAHYITGDKQLGLPAVSAVAALT
                     AGFSLLSYYLIEQPLRKRKMTFKKAFFCLYLAPSLILVGYNLYARGILKQEHLRPLPG
                     APLAAENHFPETVLTLGDSHAGHLRGFLDYVGSREGWKAKILSLDSECLVWVDTTLAD
                     NPLCRKYRDEVEKAEAVFIAQFYDLRMGGQPVPRFEAQSFLIPGFQARFRETVKRIAA
                     VKPVYVFANNTSISRSPLREEKLKRFAANQYLRPIQAMGDIGKSNQAVFDLVKDIPNV
                     HWVDAQKYLPKNTVEIHGRYLYGDQDHLTYFGSYYMGREFHKHERLLKSSRGGALQ"
BASE COUNT          938 a         1106 c         1068 g         1015 t
ORIGIN      
        1 tttttgacgg tgtacaatcg ctgtttttga acggaggatg gaatggagaa tacaaaccgt
       61 gtgccggagc aggcacgtta tgatgccgaa cgcaggcagg cagacgaagc attggcgggc
      121 gtgtttccgg cagtcagtat cttcggcagc gcgcgcacgc cgcagaatca tgcggattat
      181 gcgttcgcct gccgtctggc gcggcggctg tcggattcgg gcattgccgt catttcgggc
      241 ggcgggccgg ggattatgga ggcggcaaac aagggcgcgt ttgcagggaa gtcggtttcg
      301 gtggggctga acatcgtttt gccgcacgag cagaaaccga atccgtatca ggacatcgcc
      361 ttgcggtttt cccgttttgc cgaacgcaag gcggtgtttt tccgctattc ccaagcatat
      421 gtcgtgatgc cgggcggctt cgggacgctg gacgaattgt ttgaaatcct gaccttggtg
      481 cagacgggca aagtgccgcc gcgtccgatt gttttggtcg gaaaggcgtt ttggtcgggc
      541 ttggcggagt ggataaacgc gcagcttttg gcgcgcggtc tgatttccga aggggcggtc
      601 tctttgtttg ccatatcgga cgatgaagac gaaatcgttg cgtatctgtc ggaacacggg
      661 cttcagacgg catagcgtcc tgagagtgat gtataattgc aaacaattta acaatttttg
      721 atgtctttcc cgaacaggat gccgaaatga tcaaccccat cgcctcgctt tcccctttag
      781 acggccgtta tgcccaatcc gttgaagcat tgcgcccgat tttttccgaa tacggcctga
      841 tgaaagcgcg cgtcaaagtc gaattaaact ggctcaaagc cctcgccgcc gagccgaaga
      901 ttgccgaagt gccgcccttc agtgccgaaa cgcttgccga aatcgacacg gtgattgaaa
      961 acttttcatt ggaagacgcg gccgccgtca aagccatcga agccacgacc aatcatgatg
     1021 tcaaagccat tgaatattgg cttaaagaac gcttctccgg cgtgcctgaa gtggcagctg
     1081 ccagcgagtt catccacttt gcctgcacca gcgaagacat caacaacctg tcccacgctt
     1141 taatgctgca agaagcgcgt gaggctgttt tgctgccgaa actggccgaa atcatcgaaa
     1201 aactgaccgg catggcgcat gagttggctg ccgtcccgat gatgagccgc acccacggcc
     1261 agcctgctac accaagcaca ctgggtaaag aaatcgccaa tgtcgtgtat cgcctgcaac
     1321 gccagtttaa aaacctgcaa gcgcaagagt tcctcggcaa aatcaatggc gcagtcggca
     1381 actacaatgc ccatatggtc gcttatcccg atgtggattg ggaaacccat tgccgcaact
     1441 tcgttgaaat cagcctcggc ctgaccttca acccctacac cattcaaatc gagccgcacg
     1501 actatatggc ggaattcttc caagccatca gccgtgtcaa cacgattctg atcgacttca
     1561 accgcgatgt ttggggctat atttctttgg gttacttcaa acaaaaagtc aaagcaggcg
     1621 aagtcggttc ttccaccatg ccgcacaaag tcaacccgat cgactttgaa aactccgaag
     1681 gcaacctcgg tatggcaaac gccgtattgg gcttcttatc cgaaaaactg ccgatttccc
     1741 gttggcagcg cgacctgacc gacagcaccg tattgcgcaa tatgggcgta ggcgtgggct
     1801 atgccgtgtt gggtttcgcc gcccatctgc gcggtctgaa caagctcgaa cccaaccctg
     1861 ccgcgcttgc cgccgatttg gacgctactt gggagctgct cgccgagccg attcaaaccg
     1921 taatgcgtcg ttacggcgta gccaatcctt atgagaagct gaaagacctg acgcgcggca
     1981 aagacggcat tacgcctgaa gtgttgaaac tctttatcga gtcgttggaa attccggcag
     2041 aagccaaagc caaattgctt gagctgaccc ccgcactgta tgtgggtaag gctgaagcgt
     2101 tggcgaaacg gatttgagcg tttactgaaa ccgatgccgt ctgaacgcgc gttcagacgg
     2161 catttttaag ataacgggac atacggggcg atatttatgc aagctgtccg atacaggcct
     2221 gaaattgacg gattgcgggc cgttgccgtg ctctccgtca ttattttcca cctgaatgac
     2281 cgctggctgc ccggagggtt tttgggggtg gacattttct ttgtcatctc gggattcctc
     2341 attaccggca tcattctttc tgaaatacag aacggttctt tttctttccg gggtttttat
     2401 acccgcagga ttaagcggat ttaccctgcc tttatcgcgg ccgtgtcgct ggcttcggtg
     2461 attgcctctc aaatcttcct ttacgaagat ttcaaccaaa tgcggaaaac cgtggagctt
     2521 tctgcggttt tcttgtccaa tatttatctg gggtttcagc aggggtattt cgatttgagt
     2581 gccgacgaga accccgtact gcatatctgg tctttggcgg tagaggaaca gtattacctc
     2641 ctgtatcctc ttttgctgat attttgctgc aaaaaaacca aatcgctacg ggtgctgcgt
     2701 aacatcagca tcatcctatt tctgattttg actgccacat cgtttttgcc aagcaggttt
     2761 tataccgaca tcctcaacca acccaatact tattaccttt cgacactgag gtttcccgag
     2821 ctgttggcag gttcgctgct ggcggtttac gggcaaacgc aaaacggcag acggcaaaca
     2881 gcaagcggaa aacggcagtt gctttcatta ctctgcttcg gcgcattgct tgcctgcctg
     2941 ttcgtgattg acaaacacaa tccgtttatc ccgggaatga ccctgctcct tccctgcctg
     3001 ctgacggcac tgcttatccg gagtatgcaa tacgggacac ttccgacccg catcctgtcg
     3061 gcaagcccca tcgtatttgt cggcaaaatc tcttattccc tatacctgta ccattggatt
     3121 tttattgcct tcgcccatta cattacaggc gacaaacagc tcggactgcc tgccgtatcg
     3181 gcggttgccg cattgacggc cggattttcc ctgttgagct attatttgat tgaacagccg
     3241 cttagaaaac ggaagatgac cttcaaaaag gcatttttct gcctctatct cgccccgtcc
     3301 ctgatacttg tcggttacaa cctgtacgca agggggatat tgaaacagga acacctccgc
     3361 ccgttgcccg gcgcgcccct tgctgcggaa aatcattttc cggaaaccgt cctgaccctc
     3421 ggcgactcgc acgccggaca cctgcggggt tttctggatt atgtcggcag ccgggaaggg
     3481 tggaaagcca aaatcctgtc cctcgattcg gagtgtttgg tttgggtgga tacgacactg
     3541 gcagacaacc cgttatgtcg aaaataccgg gatgaagttg aaaaagccga agccgttttc
     3601 attgcccaat tctatgattt gaggatgggc ggccagcccg tgccgagatt tgaagcgcaa
     3661 tccttcctaa tacccgggtt ccaagcccga ttcagggaaa ccgtcaaaag gatagccgcc
     3721 gtcaaacccg tctatgtttt tgcaaacaac acatcaatca gccgttcgcc cctgagggag
     3781 gaaaaattga aaagatttgc cgcaaaccaa tatctccgcc ccattcaggc tatgggcgac
     3841 atcggcaaga gcaatcaggc ggtctttgat ttggttaaag atatccccaa tgtgcattgg
     3901 gtggacgcac agaaatacct gcctaaaaac acggtcgaaa tacacggacg ctatctttac
     3961 ggcgaccaag accacctgac ctatttcggt tcttattata tggggcggga atttcacaaa
     4021 cacgaacgcc tgcttaaatc ttcccgcggc ggcgcattgc agtagcctgc cttcttgtcg
     4081 gatattgcct ttggcagcct atgccgctgt ttgcccttcg gggcggc
//
LOCUS       DAWKJW010000162         4061 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.162, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000162 DAWKJW010000000
VERSION     DAWKJW010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4061)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4061)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4061
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.162"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(126..1376)
                     /locus_tag="WJJ54_001699"
     CDS             complement(126..1376)
                     /locus_tag="WJJ54_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEZ7342538.1"
                     /translation="MFSKSVTLAQYDPDLAAAIAQEDQRQQDHVELIASENYVSCAVM
                     EAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRVKKLFGAQYANVQPHSGSQAN
                     QAVYASVLKPGDTILGMSLAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVER
                     LALEHKPKMIVAGASAYALQIDWAKFREIADKVGAYLFVDMAHYAGLVAGGEYPNPVP
                     FCDFVTTTTHKTLRGPRGGVILCRDNTHEKALNSSIFPSLQGGPLMHVIAAKAVAFKE
                     ALQPEFKQYAKQVKINAAAMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAA
                     LGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNEADARVLANLVADVLSNPE
                     DEANLAKVREQVTALCNKYPVYGA"
     gene            complement(1443..1638)
                     /locus_tag="WJJ54_001700"
                     /pseudo
     CDS             complement(1443..1638)
                     /locus_tag="WJJ54_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221594.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1857..3632)
                     /gene="ggt"
                     /locus_tag="WJJ54_001701"
     CDS             complement(1857..3632)
                     /gene="ggt"
                     /locus_tag="WJJ54_001701"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEZ7342539.1"
                     /translation="MAKTYLLTALIMSMTISGCQVIHANQGKVNTHSAVITGADAHTP
                     EHATGLIEQKQVIASDFMVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQS
                     SGLGGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGQPLKFMEAVVGGRSVG
                     TPAIPKLMETIHQRYGVLPWGKLFDTPIRLAKQGFEVSPRLAISVEQNQQHLARYPKT
                     AAYFLPNGVPLQAGSLLKNLEFADSVQALAAQGAKALHTGKYAQNIVSVVQNAKDNPG
                     QLSLQDLSDYQVVERPPVCVTYRIYEVCGMGAPSSGGIAVGQILGILNEFSPNQVGYD
                     AEGLRLLGDASRLAFADRDVYLGDPDFVPVPIRQLISKDYLKHRSQLLEQSDKALPSV
                     SAGDFIHEWVSSQAIELPSTSHISIVDKAGNVLSMTTSIENAFGSTLMANGYLLNNEL
                     TDFSFEPIKQGKQVANRVEPGKRPRSSMAPTIVFKAGKPYMAIGSPGGSRIIGYVAKT
                     IVAHSDWNMDIQDAISAPNLLNRFGSYELETGTTALQWQQALNDLGYKTDVRELNSGV
                     QAIIIEPSRLVGGADPRREGRVMGD"
     gene            complement(3800..4036)
                     /locus_tag="WJJ54_001702"
     CDS             complement(3800..4036)
                     /locus_tag="WJJ54_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin"
                     /protein_id="HEZ7342540.1"
                     /translation="MWIFSACSRGADPIGRPFAFVNILENPEIRSTLPLIANRPTFPQ
                     LWVNGELIGGSDIILQMYQSGELKPLIEEHSPKV"
BASE COUNT         1016 a          959 c          962 g         1124 t
ORIGIN      
        1 gaaatctcct aaatgtcttg gtgggaattt aggagatttt gggggatttt gcaaaggttt
       61 ccgcctgaaa cattatgaga tttcaggcgg cattggattg cttggcggaa tatttttaaa
      121 aaggcttacg cgccgtaaac ggggtattta ttgcacaaag cagttacttg ttcgcggact
      181 ttggcgaggt tggcttcgtc ttcggggtta gacaatacgt cggcaaccaa gttcgccaat
      241 acgcgcgcgt cggcttcgtt aaaaccgcgt gtggtcatgg cggcggaacc gatgcggatg
      301 ccggaggtaa cgaagggttt ttccggatcg ttcggaatgg cgtttttgtt gacggtgatg
      361 tgcgctttgc ccaaagcggc ttcggcggct ttgccggtga ttttcatcgg ttgcaggtcg
      421 acgaggaaaa cgtggctttc ggtgcggccg gaaacgatgc gcaaaccgcg tttgaccagt
      481 tcttccgcca tggcggcagc attgattttc acttgttttg cgtattgttt gaactcgggt
      541 tgcaacgctt ctttaaacgc tacggctttg gcggcgatga cgtgcatcag cggaccgcct
      601 tgcaggcttg ggaagatgga agagttcaac gctttttcgt gggtattgtc gcggcacaaa
      661 attacgccgc cgcgaggacc gcgcagggtt ttgtgggtgg tggtggtaac gaagtcgcag
      721 aacggcacgg gattgggata ttcgccgccg gcaaccagac cggcatagtg cgccatatcg
      781 acaaagaggt atgcgccgac tttatcggcg atttcgcgga attttgccca gtcgatttgc
      841 aacgcgtagg cagacgcacc ggccacaatc attttaggtt tgtgttcgag agccaagcgt
      901 tccacttcgg cataatcgag cacttcgttt tcatccaagc cataagtaac ggcgttgtag
      961 agtttgccgg aaatattaac gctcgcgccg tgggtcaggt ggccgccgtg cgctagagac
     1021 atacccaaaa tggtgtcgcc tggttttaaa acggaagcgt acacggcttg gttggcttgc
     1081 gagccggagt gcggttggac gttggcgtat tgcgcgccga acagtttttt gacgcggtca
     1141 atcgccaatt gttcgacaat atcgacgtat tcgcagccgc cgtagtagcg tttgccgggg
     1201 tagccttcgg cgtatttgtt ggtcagctgg gaaccttgcg cttccattac ggcgcagctg
     1261 acgtagtttt cagaggcaat cagctcgacg tggtcttgct ggcgttggtc ttcttgggca
     1321 atggctgctg ccaaatcggg gtcatattgt gcgagggtaa cgctttttga aaacatgttc
     1381 tcggctcctt tgtgtaatca gggtatcatg agtgtttttt gtataaaaaa atacttcaaa
     1441 acctaaggca gatagtccat aatgcgtaaa ttttctttgg cattatcagg taatttattt
     1501 aacatgctgg tttttagcgt ctcattacct ttatgttagt acaaggctac ccaaaggcaa
     1561 tacatcaaat ggtaaatttt cggcagtttg tgcaaaatca atcaaataac cagcaccaac
     1621 cacatcttta tcagccataa cccgctgata caccacttgc caagacaact ctcctgcccc
     1681 accatgtctt aaaatcagat gaatggcttg taatgctgtg tttggcgtct cacaaattgc
     1741 gaagatctgc tcagaagctt gcttgatggc ttgtattttt gtttgattac tcacaatttc
     1801 cccctatttt aatattaact taatgcggtc aaattcacaa aatacaagct tcacctctaa
     1861 tcacccatca ctcgaccttc tcggcgtgga tcggcaccac caaccagcct gcttggctcg
     1921 ataataatgg cttgaacacc tgaatttagc tcacgcacgt cagtcttata gcccaaatca
     1981 tttaatgctt gttgccactg gagggcggtt gtacccgttt ctagttcata gctaccaaag
     2041 cgatttaata aattgggtgc actgatggca tcttggatat ccatattcca gtcactatgt
     2101 gccacaatcg tcttagcgac atagccaatg atacggctac cacctgggga gccgattgcc
     2161 atataaggct tgcctgcttt aaatacgatg gttggtgcca ttgaggagcg tggtctcttg
     2221 ccgggctcga cacgattggc gacctgtttg ccctgcttta ttggctcaaa actaaagtct
     2281 gtcagctcat tattcagcag gtagccattt gccatcaaag ttgagccaaa cgcattttca
     2341 atggaagtcg tcattgatag cacattgccc gccttatcca caattgatat atgactggta
     2401 gaaggtaact caatcgcttg tgaggacacc cactcatgaa taaaatcgcc tgcagatacg
     2461 ctaggcaatg ccttatccga ctgctcaagc agctggctgc gatgttttag gtagtcttta
     2521 gaaatcaact ggcgaatggg tactggtaca aaatcagggt cgcccaaata tacatcacga
     2581 tccgcaaacg caagcctaga agcgtcgccc aagagacgta aaccttcagc atcatacccc
     2641 acctgattgg gtgaaaattc atttaaaatc cccaaaattt gacccacagc aatcccacct
     2701 gagcttggtg cacccatacc gcatacttca taaatacgat aagtcacaca aacaggcggg
     2761 cgttccacca cttgataatc agataaatct tgtaaggata attgaccggg gttatcctta
     2821 gcattttgga caactgaaac gatattttgg gcatatttac cagtatgcag agcttttgca
     2881 ccttgagctg ctaacgcctg aacactgtca gcaaattcta aatttttcag caagctgcct
     2941 gcttgtagcg gcacaccatt cggcaaaaaa taagcggctg tttttggata gcgtgccaaa
     3001 tgctgctgat tttgctcaac cgagatggca agccttggcg acacctcaaa gccttgtttt
     3061 gccaagcgga tcggtgtatc aaataatttt ccccaaggca atacaccgta tcgctgatgt
     3121 attgtctcca tcagtttagg gatagcaggc gtacccaccg agcgaccacc gaccaccgct
     3181 tccataaatt tcaatggttg accatcttta tccaaaaata attccggcgt cgcacgcatc
     3241 ggtgccgtct cacgcccatc aaatgtggtc aatgttttgg cggtattatc ccaatacaac
     3301 acaaatgcac caccgcccaa gcctgacgac tgtggctcta ccaagcttag tgtcgtctgc
     3361 accgccacca tcgcatctgc agcgctaccg ccttgcttta agatatcata gccagcttgt
     3421 gttgctaatg gattggctga cgctaccata aaatcacttg caatcacctg cttttgttcg
     3481 atcagtcccg ttgcatgttc aggcgtgtga gcgtctgcac ctgtgatgac agcagaatga
     3541 gtattaacct taccttgatt ggcatggatg acttgacatc cagagattgt catagacatt
     3601 atcaatgcag tcaataaata tgttttagcc acaagcactc cttcgcctga gtttgattga
     3661 tgattcatac aaggcatgct gattattgta tttaatatgg ctaaataatt caatccaaac
     3721 tatcaatctt gaccatcaaa aaaagaccgc taatgtcatc agcagtcttt tttgatattt
     3781 attttaagat attaagtaat cagacctttg ggctatgctc ttcaatgagt ggttttagct
     3841 cacctgattg gtacatttgt aggataatat cactaccacc gattaactca ccattaaccc
     3901 aaagctgtgg aaaggttggc cgattggcga tgagtggtag agtactgcga atttctgggt
     3961 tttctaggat attaacaaaa gcaaagggtc tgccaattgg gtcagcacct ctactgcacg
     4021 cgctgaaaat ccacattggg gaaactgggg cgtgcctttc a
//
LOCUS       DAWKJW010000163         4045 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.163, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000163 DAWKJW010000000
VERSION     DAWKJW010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4045
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.163"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            86..904
                     /gene="opc"
                     /locus_tag="WJJ54_001703"
                     /gene_synonym="opcA"
     CDS             86..904
                     /gene="opc"
                     /locus_tag="WJJ54_001703"
                     /gene_synonym="opcA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin Opc"
                     /protein_id="HEZ7342541.1"
                     /translation="MKKTVFTCAMIALTGTAAAAQELQTANEFTVHTDLSSISSTRAF
                     LKEKHKAAKHIGVRADIPFDASQGIRLEAGFGRSKKNIINLETDENKLGKTKNVKLPT
                     GVPENRIDLYTGYTYTQTLSDSLNFRVGAGLGFESSKDSIKTTKHTLHSSRQSWSAKV
                     HADLLSQLGNGWYINPWSEVKFDLKSRYKLNTGVTSLKKDINQKTNGWGFGLGANIGK
                     KLGESASIEAGPFYKQRTYKESGEFSVTTTSGDVSLTIPKTSIREYGLRVGIKF"
     gene            1067..1711
                     /locus_tag="WJJ54_001704"
     CDS             1067..1711
                     /locus_tag="WJJ54_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ7342542.1"
                     /translation="MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVT
                     PLLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDS
                     KIFRREYLDKTHRFYEKHGGKTIIIARFMPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
                     LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGAVEIARAKLAVKSKR"
     gene            1730..3640
                     /locus_tag="WJJ54_001705"
     CDS             1730..3640
                     /locus_tag="WJJ54_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ7342543.1"
                     /translation="MNILSVENASFAIGHVALLDKTSFQLDSGEKVGLIGRNGAGKSS
                     FLKILAGLQKLDDGQIIVQNNLKIVYVPQESFFDKDATVFDTVAEGLGEIRDLLRRYH
                     HVSHDLEHNSDDVLLKELNELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGG
                     QKKRVALAQAWVQKPDVLLLDEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDN
                     IATRIVELDRGILRSYPGSFSKYSEKKAQELAVEAEHNRLFDKFHAQEEAWIRKGIEA
                     RRTRNEGRVRRLEELRRQRAERRNVQGQVNFKLDSGEKSGKIIAELEHASFAYGGKVI
                     MDKFSAILQRGDKIGLIGPNGIGKTTFLKLILGELQPTYGRIRIGSKQEVAYFDQFRS
                     ALNENDTVFYTLGQGNDYVEVGGKKKHVMSYLEDFLFPPARAQSPVSSLSGGERNRLL
                     LAKLFTRPANILVLDEPTNDLDIDTQELLEDLLRDYQGTVFLVSHDRMFLDNVITQSL
                     VFEGNGRLKEYIGGYQDYIDAKSREAKIQTESAPKTADAEPVKEKPKANRTVKLSYKE
                     QRELDALPDEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERW
                     ELLETKQNGNAV"
     gene            3661..4026
                     /locus_tag="WJJ54_001706"
     CDS             3661..4026
                     /locus_tag="WJJ54_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342544.1"
                     /translation="MFKRPEEIIVLILAVLWIAGTYFLAALFGADAYTVLKITALTLL
                     WSAASFLLWQKNLSRHIWPLLLGCLTACWWPYLNQSVAPGSLPWYASWTFKTILALIP
                     VTAGYLFKWKQYRQRKTKP"
BASE COUNT         1075 a         1037 c          943 g          990 t
ORIGIN      
        1 gcttaagaat ataattgtaa gcgtaacgat tatttacgtt atgttaccat atccgactac
       61 aatccaaatt ttggagattt taactatgaa aaaaacagtt tttacatgtg ccatgattgc
      121 cctgaccggt actgccgccg ctgcacaaga gcttcaaacc gctaatgagt ttaccgtcca
      181 caccgacctc tcttccattt cttcaactcg tgctttcctg aaagaaaaac acaaagctgc
      241 caaacacatc ggcgtacgtg ctgatattcc ttttgatgcc agccaaggca tccgcttgga
      301 agccggtttc gggcgcagca aaaaaaatat tattaatttg gaaacagatg agaacaagct
      361 gggtaagact aaaaatgtaa aactgcccac cggcgttcct gaaaaccgta tcgatcttta
      421 cacaggctac acctataccc aaacgttaag tgattcttta aatttccgtg tgggtgccgg
      481 cttgggtttt gaatcttcaa aagacagcat taaaaccacc aagcatacgc ttcacagcag
      541 ccgtcagtcg tggtcagcca aagttcacgc ggatttgctt tcccaactgg gtaacggctg
      601 gtatatcaac ccttggtctg aagtgaaatt tgacctcaag tcccgctata aattaaacac
      661 cggcgttacc agtctcaaaa aagacatcaa tcaaaaaacc aacggctggg gctttggatt
      721 gggtgcaaat attggtaaaa aactgggcga atccgccagc atcgaggcgg ggccgttcta
      781 caaacaacgc acttacaaag aatccggcga gtttagtgta acaaccacga gtggcgacgt
      841 atcgctcacc atcccgaaaa ccagtattcg tgaatacggc ttgcgcgtcg gcataaaatt
      901 ctgatgattt gaaatcatca ttgtcgcttt aaatgccaaa ccgcaaacta ttttggtttg
      961 cggtttttac gtgaaatgaa tttgaatagc cgatgccgtc tgaaaatttc agacggcatt
     1021 tttccaatcg gttaaaatac gcggtttgtt tttttaggaa cgcgccgtgc ttgcctccgc
     1081 catcgacttc atcctccata tcgaccaaca cctgctcgcg ctgtcggcgc aatacggtgt
     1141 gtggatttat gcgattctgt ttttgattgt tttttgcgaa accggcctga ttgttacgcc
     1201 cttactgccc ggcgattcgc tgctgtttgc cgccggcggg attgccgcgc tgggcggtat
     1261 ggatattcat ttgatggttg cattattaag ccttgccgcc atactcggcg acgcgctcaa
     1321 ttttaccgtc ggcaaatatt tcggcggcag gctgttcgcc aaccccgatt ctaaaatctt
     1381 ccgacgtgaa tatctcgata aaacccaccg tttttacgaa aaacacggcg gcaaaaccat
     1441 catcattgcc cgttttatgc ccatcgtccg caccttcgcc cccttcgtcg ccggtatggg
     1501 gaaaatgcac tatgccaaat ttatccgcta caacatcatc ggtggcttgt tgtgggttat
     1561 cctgttttct tacgcgggct atttctttgc caacttcccc gtcgtaaaaa acaatctggg
     1621 cttggtgatg ggcggcatca ttattgtttc cgtcctgccg ggtgcggttg aaattgcccg
     1681 cgccaaactt gcggtaaaat ccaaacggta actgttgaga atttgtatca tgaatatatt
     1741 atctgtagaa aacgcttctt ttgccatcgg ccacgttgcc ttgctcgaca aaacttcttt
     1801 tcaactcgac agcggcgaaa aagtcggctt aatcggacgc aacggcgcag gcaagtcttc
     1861 gtttttaaaa atcctcgccg gtttgcaaaa gctcgacgac gggcagatta ttgttcaaaa
     1921 caacctcaaa atcgtttatg taccgcagga atcctttttt gataaggacg caaccgtatt
     1981 tgataccgtt gccgaaggtt tgggcgaaat tcgcgattta ttgcgccgtt atcatcatgt
     2041 cagccatgat ttggagcaca attcagacga cgttttatta aaagaactca acgaattaca
     2101 actcgaaatc gaagcgaagg acggctggaa gctggatgcg gcagtcaagc agactttggg
     2161 cgaactcggt ttgccggaaa acgaaaaaat cggcaacctt tccggcggtc agaaaaagcg
     2221 tgtcgccttg gcgcaggctt gggtgcagaa gcccgacgta ttgctgctgg acgaaccgac
     2281 caaccatttg gatattgacg cgattatctg gttggaaaac ctgctcaagg cgtttgaagg
     2341 cagcttggtc gtgattaccc acgaccgccg ttttttggat aatatcgcca cgcggattgt
     2401 cgaacttgac cgcggcattc tacgttccta tcccggctcg ttctctaaat acagtgagaa
     2461 aaaagcgcaa gagttggcag tcgaggcgga acataaccgc ttgtttgaca aatttcatgc
     2521 tcaggaagaa gcgtggatac gcaaaggcat tgaagcgcgc cgtacccgta acgaaggccg
     2581 cgtgcgccgc ttggaagagc tgcgccgcca acgtgcagaa cgccgcaacg tgcagggaca
     2641 ggtcaacttt aagctcgaca gcggtgagaa gagcggcaaa atcatcgccg aattggagca
     2701 cgcttcgttt gcctacggcg gcaaagtcat tatggacaaa ttctccgcca tcttgcagcg
     2761 cggcgacaaa atcggcttaa tcggtccaaa cggcatcggc aaaaccacat ttttaaaact
     2821 gattttgggc gaattgcagc cgacctacgg cagaatccgt atcggcagca agcaggaagt
     2881 cgcctatttc gaccagttcc gcagcgcgtt gaatgaaaac gacaccgtgt tttacacgct
     2941 cggacagggc aatgattacg ttgaagtcgg cggtaagaaa aagcatgtga tgagctattt
     3001 ggaagatttc ctgttccccc ctgcccgcgc gcaaagtcct gtttcttcac tctccggcgg
     3061 cgaacgcaac cgccttttgc tggcaaaact ctttacccgt cccgccaata ttttggtctt
     3121 ggacgaaccg accaatgact tggacatcga cacccaagag ctgctcgaag acctgttgcg
     3181 cgattatcaa ggcacggtat tccttgtctc gcacgaccgt atgttcctcg ataacgtgat
     3241 tacccaaagc cttgtttttg aaggaaatgg aaggttaaaa gaatatatcg gcggctatca
     3301 ggactacatc gacgcaaaat cacgcgaagc gaagattcag acggaatccg cacccaaaac
     3361 agccgatgcc gaaccggtga aagaaaaacc caaagccaac cgcacggtca aactgtccta
     3421 caaagaacag cgagaactcg atgccctgcc cgacgaaatc gccgccttgg aagccgaaca
     3481 ggcagaaatc aacgcgcagc tttccgatcc cgaaatcttc aaagattacg aaaaagccgg
     3541 cgcactgcaa agccgcgccg aagaaatcga aatgctgctt ttggaaaagc tggaacgctg
     3601 ggagctgctg gaaaccaaac agaacggcaa tgccgtctga aatcaaacag gaagaaaaaa
     3661 atgttcaaac gacctgaaga aatcatcgtc ctgatacttg ccgtcctctg gattgccggt
     3721 acgtattttc tcgccgccct gtttggagcg gacgcttata ccgtgttaaa aatcactgcc
     3781 cttaccctgc tttggtctgc cgcatcattc ctcctttggc aaaaaaacct cagccggcat
     3841 atctggccgc tgctgctcgg ctgcctgact gcctgttggt ggccgtatct gaatcaatcg
     3901 gtcgcacccg gttctttacc ttggtatgca tcatggacgt tcaaaaccat cttagccctg
     3961 attcccgtaa ccgcaggtta tctgtttaaa tggaaacaat accggcagcg caaaacaaag
     4021 ccgtaagccc gtctttttca gacgg
//
LOCUS       DAWKJW010000164         4034 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.164, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000164 DAWKJW010000000
VERSION     DAWKJW010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4034
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.164"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..739)
                     /locus_tag="WJJ54_001707"
     CDS             complement(<1..739)
                     /locus_tag="WJJ54_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEZ7342545.1"
                     /translation="MFSLYREDSLISRLNRDGYLTSPSADFLELLSLCRDIHALTEGA
                     FDPTVQVLWKLYADYFSAHPDAETPPLENSVKEALKRVGFGKVSFDDREIRFTEKGMG
                     LSLNGIAQGYITDKVVALLKANGVPAALVDMGEIRGFDTNGKRTWNVGIRNLDDEEGV
                     LANITMKDKAFATSGGYGTVMDKAGRFTHLFDPRTGAGTPRYKSMSVMADDAAVADAL
                     STAFSIMDLPLIRSVAESRRLKVWLVMP"
     gene            complement(720..1001)
                     /locus_tag="WJJ54_001708"
     CDS             complement(720..1001)
                     /locus_tag="WJJ54_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nosX protein required for nitrous oxide
                     reduction"
                     /protein_id="HEZ7342546.1"
                     /translation="MDRHFGRRRFLTVAAVAAAGAAVSFLPNPFAADDEKRNKDEKRN
                     ENVFFWKGVALGSGAELRLFGVDDRQAADLVNKVLAEVARLEKIVQPLP"
     gene            complement(1012..1806)
                     /locus_tag="WJJ54_001709"
     CDS             complement(1012..1806)
                     /locus_tag="WJJ54_001709"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEZ7342547.1"
                     /translation="MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPL
                     LTTKKLHLRSIIHELLWFLKGDPNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWP
                     APDGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLS
                     CQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAAL
                     QLEREPRALPVMKINPEVKDLFAFKFEDFELEGYDPHPHIKAAVSV"
     gene            2190..3524
                     /gene="gdhA"
                     /locus_tag="WJJ54_001710"
     CDS             2190..3524
                     /gene="gdhA"
                     /locus_tag="WJJ54_001710"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HEZ7342548.1"
                     /translation="MTDLNTLFANLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQ
                     QSLLERIVEPERVVMFRVTWQDDKGQVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELYRHIGADTD
                     VPAGDIGVGGREIGYLFGQYKKIRNEFSSVLTGKGLEWGGSLIRPEATGYGCVYFAQA
                     MLQTRNDSFEGKRVLISGSGNVAQYAAEKAIQLGAKVLTVSDSNGFVLFPDSGMTEAQ
                     LAALIELKEVRRERVATYAKEQGLQYFEKQKPWGVAAEIALPCATQNELDEEAAKTLL
                     ANGCYVVAEGANMPLTLGAVEQFIKAGILYAPGKASNAGGVATSGLEMSQNAIRLSWT
                     REEVDQRLFGIMQSIHESCLKYGKVGDTVNYVNGANIAGFVKVADAMLAQGF"
     gene            3666..>4034
                     /locus_tag="WJJ54_001711"
     CDS             3666..>4034
                     /locus_tag="WJJ54_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342549.1"
                     /translation="MIMDQYYMELKNKLSNRPILLDNTNDFLFVLVNTVKAMIENTDK
                     SQLSELDKILDGVTSQELKLAYDFCQGKFGQAGFSYRRHPNYFYLSSLIATFPEFELS
                     KADRDYLKGIINFDNYLLYEL"
BASE COUNT         1065 a         1108 c          939 g          922 t
ORIGIN      
        1 ccggcatgac cagccaaacc ttaagccgcc tgctttcggc aaccgaccgt atcaagggca
       61 aatccataat ggaaaacgcc gtcgacaagg catcggcaac cgccgcatca tccgccatca
      121 cgctcatgct tttataacgc ggcgtacccg cgccggtccg cggatcgaac aaatgggtaa
      181 acctgcccgc cttgtccatc accgtcccat agccgcccga agtggcaaac gccttgtctt
      241 tcatcgtgat atttgccaac acgccttctt cgtcgtccag attgcggatg ccgacattcc
      301 aagtccgttt accgtttgta tcaaatcccc tgatttcgcc catatcgacc agcgcggcag
      361 gcacgccgtt tgctttaagc agcgcaacaa ccttgtccgt gatatagcct tgcgcgatgc
      421 cgttcaagga caaacccata cccttttcgg taaaacggat ttcacggtcg tcaaacgaga
      481 ctttgccgaa gccgacccgc ttcagggctt ccttcacgct attctccagc ggcggcgttt
      541 ccgcatcggg atgggcggaa aaataatcgg catacagttt ccacaaaacc tgcactgtcg
      601 gatcgaacgc gccttccgtc agcgcgtgaa tatcgcggca caggctcaac agttccaaaa
      661 aatccgccga cggcgaagtc agataaccgt cacggttcag gcggctgatc aggctgtctt
      721 cacggtaaag gctgaacaat tttttccaaa cgcgccactt ccgccaaaac cttgttgacc
      781 aaatccgccg cctgtctgtc gtccacaccg aacaggcgca gctccgcacc ggaacccagc
      841 gcgacacctt tccagaagaa cacattttca ttgcgttttt catctttatt gcgtttttca
      901 tcatcggcgg caaaaggatt cggcaggaaa gaaaccgccg cgcccgccgc cgcaacggcg
      961 gcaaccgtca gaaaacgcct gcgcccgaaa tgcctgtcca tatacccctc ctcagaccga
     1021 cactgccgcc ttgatgtgcg gatgcggatc gtagccttcc aactcaaaat cttcaaattt
     1081 gaaggcaaac aaatctttga cttcaggatt gattttcatc acaggcaagg cgcgcggttc
     1141 gcgttccaac tgcaatgcgg cctgctcgaa atggttgcgg tacaggtgcg cgtcgccaaa
     1201 cgtatggaca aactcgcccg cctccaatcc gcacacttgc gccatcatca tcgtcaacag
     1261 cgcgtagctg gcaatattaa acggcacgcc gaggaaaata tccgcgctgc gctggtaaag
     1321 ctggcaggac agtttgccgt cggcaacgta aaactgaaac agcgcgtggc agggcggcaa
     1381 tgccatttca tcgaccaaag ccggattcca cgccgacaca atcaggcggc gcgagtccgg
     1441 attcttcttg atttgttcca ccacattggc aatttggtcg atatggcgtc cgtcgggcgc
     1501 gggccaactg cgccattggt agccgtaaac cggtcccaag tcgccgtttt cgtccgccca
     1561 ctcgtcccaa atggaaacat tgttgtcctt cagatatttg atattgggat cgcctttgag
     1621 aaaccaaagc agctcgtgaa taatcgagcg cagatgtagc tttttggtcg tcagcagcgg
     1681 aaaacctttg cccaagtcaa aacgcatctg ataaccgaat acggagcgcg tgcccgtacc
     1741 ggtgcggtct gatttgtccg taccgttgtc gaggacgtgg cgcatcaagt ccaaataggc
     1801 tttcatagca gtctttcatc aaattaaacg gcgcatattg taacatttcc ggataatgcc
     1861 caaaacacgg atacaggcag gcaggattgt tggcaatttc agtccttttc cacagtaaaa
     1921 cccggtggga aaacaaaatt accttgattg gaatcagaaa atctagttta attacttaga
     1981 ataaaatttc aataatattt ttatttacga aattaattta tgattattga ttgattatcg
     2041 gcaacaaaca tcaaacatcg aaaacatgga aaaaataatg tcaacaattt ttgccaaatc
     2101 gggcttggca tcagaaaaaa ataggtttat attcccacct acaaatttgt tttcccatta
     2161 gtacactatc aaccaaaagg agtatccgaa tgactgacct gaacaccctg tttgccaacc
     2221 tcaaacaacg caatcccaat caggagccgt tccatcaggc ggttgaagaa gtcttcatga
     2281 gtctcgatcc gtttttggca aaaaatccga aatacaccca gcaaagcctg ctggaacgca
     2341 tcgtcgaacc cgaacgcgtc gtgatgttcc gcgtaacctg gcaggacgat aaagggcaag
     2401 tccaagtcaa ccggggctac cgcgtgcaaa tgagttccgc catcggtcct tacaaaggcg
     2461 gcctgcgctt ccatccgacc gtcgatttgg gcgtattgaa attcctcgct tttgaacaag
     2521 tgttcaaaaa cgccttgacc accctgccta tgggcggcgg caaaggcggt tccgacttcg
     2581 accccaaagg caaatccgat gccgaagtaa tgcgcttctg ccaagccttt atgaccgaac
     2641 tctaccgcca catcggcgcg gacaccgatg ttccggccgg cgacatcggc gtaggcgggc
     2701 gcgaaatcgg ctacctgttc ggacaataca aaaaaatccg caacgagttt tcttccgtcc
     2761 tgaccggcaa aggtttggaa tggggcggca gcctcatccg tcccgaagcg accggctacg
     2821 gctgcgtcta tttcgcccaa gcgatgctgc aaacccgcaa cgatagtttt gaaggcaaac
     2881 gcgtcctgat ttccggctcc ggcaatgtgg cgcaatacgc cgccgaaaaa gccatccaac
     2941 tgggtgcgaa agtactgacc gtttccgact ccaacggctt cgtcctcttc cccgacagcg
     3001 gtatgaccga agcgcaactc gccgccttga tcgaattgaa agaagtccgc cgcgaacgcg
     3061 ttgccaccta cgccaaagag caaggtctgc aatactttga aaaacaaaaa ccgtggggcg
     3121 tcgccgccga aatcgccctg ccctgcgcga cccagaacga attggacgaa gaagccgcca
     3181 aaaccctgtt ggcaaacggc tgctacgtcg ttgccgaagg tgcgaatatg ccgttgactt
     3241 tgggcgcggt cgagcaattt atcaaagccg gcatcctcta cgccccggga aaagcctcca
     3301 atgccggcgg cgtggcaact tcaggtttgg aaatgagcca aaacgccatc cgcctgtctt
     3361 ggactcgtga agaagtcgac caacgcctgt tcggcatcat gcaaagcatc cacgaatcct
     3421 gtctgaaata cggcaaagtc ggcgacacag taaactacgt caatggtgcg aacattgccg
     3481 gtttcgtcaa agttgccgat gcgatgctgg cgcaaggctt ctaagcaaac gccgccgctc
     3541 cgcaaacaaa atgccgtccg aaccgcaaat gctgttcaga cggcatttcc ttatccgccc
     3601 gttcaaatcg ggtgatacta tttgtatcca gaattgttgg atagtttggg agtggagagg
     3661 aagaaatgat tatggaccaa tactatatgg agttaaagaa taagttatct aacagaccaa
     3721 tcctactgga taatactaat gattttcttt ttgttttagt aaatacagtg aaagctatga
     3781 tagaaaatac tgataaaagt cagctttcag agttagataa aattttagac ggtgtcacaa
     3841 gtcaagaatt gaaacttgcc tatgattttt gtcaagggaa attcggtcaa gcaggttttt
     3901 cttatcgtag gcacccgaat tatttttatt tgtccagttt aattgcgact tttccagaat
     3961 ttgagttgtc taaagcagac cgagattacc tcaaaggaat cataaatttt gataactacc
     4021 ttttatatga gtta
//
LOCUS       DAWKJW010000165         3988 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.165, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000165 DAWKJW010000000
VERSION     DAWKJW010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3988
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.165"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(94..990)
                     /gene="argB"
                     /locus_tag="WJJ54_001712"
     CDS             complement(94..990)
                     /gene="argB"
                     /locus_tag="WJJ54_001712"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEZ7342550.1"
                     /translation="MESENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPA
                     LKEGFARDVVLLKLVGIHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKETMDIVE
                     MVLGGHVNKEIVSMINTYGGHAVGVSGRDDHFIKAKKLLIDTPEQNGVDIGQVGTVES
                     IDTGLVKGLIERGCIPVVAPVGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAG
                     VMDKTGNLLTKLTPKRIDELIADGTLYGGMLPKIASAVEAAVNGVKATHIIDGRVPNA
                     LLLEIFTDAGIGSMILGGGEDA"
     gene            1160..2290
                     /locus_tag="WJJ54_001713"
     CDS             1160..2290
                     /locus_tag="WJJ54_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase family protein"
                     /protein_id="HEZ7342551.1"
                     /translation="MIKISTRFDAGSVVVKDLTDPSNIRLALRPDNASDFAQWFYFRL
                     QGAAYQNCIMHFENAAEAAYPKGWEGYQACASYDRRNWFRVPTSYENGVLTVNHTPLS
                     NSVYYAYFEPYSEEQHLNLLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDLKI
                     WITARQHPGETMAEWFVEGLLGRLLDPQDATARTLLDRATFYIVPNMNPDGSALGNLR
                     TNAAGANLNREWENPTVEKSPEVFFVREKMLETGVDLFLDIHGDEGLPFIFVAGTEGV
                     PNYNPRISALETQFKTALLNASPDFQDEYGYEKDAPGQANMTLATNWVGNRFNCLAYT
                     LEMPFKDNANLPDDDFGWNGQRSLRLGEAALSAILNIIGDLR"
     gene            2361..3212
                     /locus_tag="WJJ54_001714"
     CDS             2361..3212
                     /locus_tag="WJJ54_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEZ7342552.1"
                     /translation="MITHPQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQG
                     LSVFTKESLDDFLTWGILGVILGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGF
                     LGVVIAIWLFGRKHGIGFLKLMDTVAPLVPLGLASGRIGNFINGELWGRVTDINAFWA
                     MGFPQARYEDAEAAAHNPLWAEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKQ
                     RPTGQVASLFLGGYGIFRFIAEFARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVR
                     FGMKKQH"
     gene            complement(3295..3957)
                     /locus_tag="WJJ54_001715"
     CDS             complement(3295..3957)
                     /locus_tag="WJJ54_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecA family protein"
                     /protein_id="HEZ7342553.1"
                     /translation="MDSQKFTEASKRRLSELLDAKSEQGNTMRCDEVQGFMTALLSGP
                     DKLTPLDWLPEVLGDESQFTAAERSEIERLVLAMAMETTAAMSDKKLPDLWLYENEDG
                     GSDFYTWCNAYLYGLDIVPTDWFEAADDEEFEELFYPIMALGGIYDEEENGAIRLQFT
                     EGELAELESELPYALADIYRYWQAVINKPQTVRREGEKTGRNDPCPCGSGRKYKACCG
                     KN"
BASE COUNT          866 a         1178 c          984 g          960 t
ORIGIN      
        1 tcaggaatga cggtttggaa attgcccgaa accccaaaaa cagaaaccgg acaaacgggt
       61 tttccgccaa agccggcatt ttccgacttt gcttcaggca tcttccccac cgcccaaaat
      121 catcgaaccg ataccggcat cggtaaagat ttccagcaaa agcgcgttgg gcaccctgcc
      181 gtcgatgatg tgcgtggctt tcacgccgtt gacggcggct tcgaccgcgg aagcgatttt
      241 cggcagcata ccgccataca gcgtgccgtc ggcaatcagt tcatcaatcc gtttcggcgt
      301 gagtttggtc agcagattgc ccgttttgtc catcacaccg gcgatattcg tcatcatcaa
      361 gagtttttca gcgttcaatt cttccgccaa tttgcctgct accaaatcgg cgttgatgtt
      421 gaacgcttcg cctttttcac ctacgccgac gggggcgacg acgggaatgc agccgcgttc
      481 tatcagccct ttaaccaaac cggtatcgat gctttccacc gtaccgacct gtccgatgtc
      541 cacgccattc tgttcgggcg tatcgatcaa aagtttcttc gccttaatga aatgatcgtc
      601 gcgtccgctt acgccgaccg cgtgcccgcc atatgtgtta atcatcgaca cgatttcttt
      661 attgacgtgc ccgcccaaca ccatttcgac aatatccatc gtctctttgt cggtcacgcg
      721 cattccttgg acaaactcgc cctttttgcc gactttttca agcatcgcat tgatctgcgg
      781 cccgccgccg tgaacgataa cgggatggat gccgaccagc ttcagcagca cgacatcgcg
      841 ggcaaaccct tctttcaagg caggttcggt catcgcgttg ccgccgtact tgatgacggc
      901 gaccgaaccg gaaaaccggc ggatgtaagg cagcgcttcg gcaaggatac gcgctttgtc
      961 ggcggcggaa ataatgtttt cagactccat aacgactccc tattgttgac aatttcggct
     1021 tatgttaacg ccaaacgccg tctgaaacaa tcttcagacg gcatctggca gaccttcggg
     1081 caggttgaag ccttgcgata cgggcggtaa aatcgcggtt tatccggttc gagaaaccgg
     1141 cgacagcaag gactttccca tgattaaaat cagcacccgc ttcgatgccg gctcggtcgt
     1201 cgtcaaagac ctgaccgacc cttccaacat ccgcctcgcc ctgcgtcccg acaacgcctc
     1261 cgattttgca caatggttct acttccggct gcaaggcgcg gcatatcaaa actgcatcat
     1321 gcattttgaa aacgcggcag aagccgccta cccgaaaggc tgggaaggct atcaggcgtg
     1381 tgcctcatac gaccgccgca actggttccg cgtaccgact tcctacgaaa acggcgtact
     1441 gaccgtcaat catacgccgc tgtccaacag cgtgtattac gcctatttcg aaccttactc
     1501 cgaagaacag catttaaacc tcctcggcga cgcgcaaggc agcggcctgt gccgcatcga
     1561 cgacttgggc agcaccgtgc aaggccgcga catcaatctg ctgaccatcg gcaatcaggt
     1621 cgaaagcgat ctgaaaatct ggattaccgc ccgccagcat ccgggcgaaa ccatggcgga
     1681 atggtttgtc gaggggctgc tcggcaggct gctcgaccct caggatgcaa ccgcgcgcac
     1741 cctgctcgat cgcgccacgt tctatatcgt ccccaacatg aaccccgacg gttcggcact
     1801 gggcaacctt cgtaccaacg ccgccggtgc gaacctcaac cgcgaatggg aaaatccgac
     1861 tgtggaaaaa agcccggaag tgttcttcgt gcgcgaaaaa atgctggaaa ccggcgtgga
     1921 tttgttcttg gacatccacg gcgacgaagg gctgcccttt atctttgttg caggaactga
     1981 aggcgtgcca aactacaatc cgcgcatttc cgcgttggaa acacagttca aaaccgccct
     2041 tttgaacgcc agccccgatt tccaagacga atacggttac gaaaaagatg cgcccggtca
     2101 ggcaaacatg accttggcaa caaactgggt cggcaaccgt ttcaactgcc ttgcctatac
     2161 gttggaaatg ccgttcaaag acaatgccaa cctgcccgac gacgatttcg gatggaacgg
     2221 tcaacggtcg ttgcgcttgg gcgaagccgc gttgtccgcc atcctcaaca tcatcggcga
     2281 tttgcgctga aacccttatt gcagaaatgc cgtctgaagc atcatgcctt tcagacggca
     2341 tttgaaaacg aaagcccgtt atgattaccc atccccaatt cgaccccgtc cttatcagta
     2401 tcggcccgct tgccgtccgc tggtatgccc taagctacat cctcggattt attcttttta
     2461 cctttctcgg cagaaggcgc atcgcgcaag gcttgtccgt ttttaccaaa gaatcgctcg
     2521 acgacttcct gacatggggc attttgggcg taattttggg cgggcgtttg ggttacgtcc
     2581 tgttttacaa gttttccgac tacctcgccc atccgcttga tattttcaag gtatgggaag
     2641 gcggaatgtc gttccacggc ggctttttgg gtgtagttat tgccatatgg ttgttcggcc
     2701 gcaaacacgg catcggcttc ctcaaactga tggacacggt cgcaccgctt gttccgctgg
     2761 gtctcgcttc aggacgtatc ggcaacttca tcaacggcga actttgggga cgcgttaccg
     2821 acatcaacgc attttgggca atgggcttcc cgcaggcgcg ttacgaagat gccgaagccg
     2881 ccgcgcacaa tccgctttgg gcagaatggc tgcaacaata cggtatgctg ccgcgtcatc
     2941 cctcgcagct ttatcagttt gcacttgaag gcatctgcct gttcgccgtc gtttggctgt
     3001 tctctaaaaa acagcggccg accggacaag tcgcctcgct cttcctcggc ggctacggca
     3061 tattccgctt cattgccgaa ttcgcacgcc aacccgacga ctatctcggg ctgctgacct
     3121 tggggctgtc gatggggcaa tggttgagcg tcccgatgat tgttttgggt atcgtcggct
     3181 ttgtccggtt cggcatgaaa aaacagcact gaccgcctgt gaaaaatacc gtctgaaaca
     3241 tggaaatccg gtttcagacg gtatttttac gtttggttca tggaaacaaa cgcttcaatt
     3301 cttaccgcaa cacgccttgt attttctgcc gctgccgcac ggacagggat cgttcctgcc
     3361 ggttttttcc ccttccctgc ggacggtttg cggcttgttg atgaccgcct gccagtagcg
     3421 gtaaatgtcc gccagcgcgt aaggcaactc ggattccagc tccgccagct cgccttctgt
     3481 gaattgcagc cggatagcgc cgttttcctc ttcgtcgtaa ataccgccca atgccatgat
     3541 gggataaaac aactcttcaa attcttcatc atcggcggct tcaaaccaat cggtcggcac
     3601 aatatccaag ccgtaaagat aagcattgca ccatgtgtaa aaatcgctgc cgccgtcttc
     3661 gttttcatac agccacaaat cgggcagttt tttatccgac atcgcggcgg ttgtttccat
     3721 cgccattgcc aaaaccagcc gttcgatttc ggaacgttcg gcggcggtaa attgcgattc
     3781 gtcgcccaac acttcgggca gccagtcgag cggtgtcaat ttgtccggcc cgctcaacag
     3841 cgccgtcata aaaccttgaa cctcgtcgca acgcatcgtg ttgccttgtt cgcttttggc
     3901 atccaacaat tcgctcaacc gccgtttgga tgcttcggta aatttttggg aatccatcat
     3961 tttccttttc aaatgggttt tgcgccct
//
LOCUS       DAWKJW010000166         3974 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.166, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000166 DAWKJW010000000
VERSION     DAWKJW010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3974
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.166"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            48..471
                     /locus_tag="WJJ54_001716"
                     /pseudo
     CDS             48..471
                     /locus_tag="WJJ54_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221878.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            577..1140
                     /gene="pgsA"
                     /locus_tag="WJJ54_001717"
     CDS             577..1140
                     /gene="pgsA"
                     /locus_tag="WJJ54_001717"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEZ7342554.1"
                     /translation="MPWNLPIFLTWLRVLLIPVMTALFYLPFPWFAEETINLTAAVIF
                     AVAALTDWFDGFLARLWKQTSDFGAFLDPVADKLMVAVSLLLLVKLDRTYVLFAMIII
                     GREITISALREWMAQMGKRNSVAVATVGKFKTAAQMLAIFLLLLNIPDFYGFNLVVIG
                     NVLMFIASLLTVWSMLYYLKMAWKEIA"
     gene            1220..1295
                     /locus_tag="WJJ54_001718"
     tRNA            1220..1295
                     /locus_tag="WJJ54_001718"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1253..1255,aa:Gly,seq:gcc)
     gene            1321..1396
                     /locus_tag="WJJ54_001719"
     tRNA            1321..1396
                     /locus_tag="WJJ54_001719"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1354..1356,aa:Gly,seq:gcc)
     gene            1420..1495
                     /locus_tag="WJJ54_001720"
     tRNA            1420..1495
                     /locus_tag="WJJ54_001720"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1453..1455,aa:Gly,seq:gcc)
     gene            1521..1594
                     /locus_tag="WJJ54_001721"
     tRNA            1521..1594
                     /locus_tag="WJJ54_001721"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1553..1555,aa:Cys,seq:gca)
     gene            1697..1786
                     /locus_tag="WJJ54_001722"
     tRNA            1697..1786
                     /locus_tag="WJJ54_001722"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1731..1733,aa:Leu,seq:taa)
     gene            1890..2942
                     /gene="sohB"
                     /locus_tag="WJJ54_001723"
     CDS             1890..2942
                     /gene="sohB"
                     /locus_tag="WJJ54_001723"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HEZ7342555.1"
                     /translation="MWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL
                     TDFSENYKKQRQSFEAFFLSGEEAKHQEKEEKKKEKAEAKAEKKRLKEGGEKSAETQK
                     SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQL
                     RRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEVPNIHRLLKK
                     HDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPQLDIEEV
                     ATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKQSLIQRIGLQAEAS
                     VEKLFAKLVNRRADVM"
     gene            complement(2993..3859)
                     /locus_tag="WJJ54_001724"
     CDS             complement(2993..3859)
                     /locus_tag="WJJ54_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter six-transmembrane
                     domain-containing protein"
                     /protein_id="HEZ7342556.1"
                     /translation="MWKMLKHIAQTHRKRLIGTFSLVGLENLLMLVYPVFGGRAINAV
                     IAGEVWQALLYALVVLLMWLVGAARRIADTRTFTRIYTEIAVPVVLEQRQRQVPHSAV
                     TARVALSREFVSFFEEHLPIAATSVVSIFGACIMLLVLEFWVGVSAVGILALFLWLLP
                     RFAAISENLYFRLNNSLECDNHFIRKGDRRQLYRHYGLVARLRVLISNREAFGYLCVG
                     TAMGILFGFAFVMMTLKGYSSAGHVYSVGTYLWMFAMSLDDVPRLVEQYSNLKDIGQR
                     IGGLERNIKAGT"
     gene            complement(3870..>3974)
                     /locus_tag="WJJ54_001725"
     CDS             complement(3870..>3974)
                     /locus_tag="WJJ54_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEZ7342557.1"
                     /translation="KVFATFGDKRTTRLFADLDALAEVMEKTISENKK"
BASE COUNT         1003 a          945 c         1037 g          989 t
ORIGIN      
        1 cactatatta tcgctgggta tggtttgccg ccataagctg tctgctgttg tccgccgttt
       61 ttattgcacc ttacctgacg gcatttcacg aacaagaaaa aacattagaa tatgcggaat
      121 tgaccgttac cgcccccaac cgcagcggac gggcaatcaa actggatgca gacgggcagc
      181 attaccggct ttcctgctat gggttcgaca gtttgtgcac aggcggcaat atcggcagaa
      241 ccatcagggc ggagcaggtt agagccgttt taagcgaaac cgtcggcaaa ggttttttaa
      301 acggcgttct gttggaatac cgcaacagtg gcagtgtcta taagcaataa agattttgcc
      361 cgcacggaag accgccttgt cgaagtgttg gcacaacctg ccgttttcag cctgaaactg
      421 ggtattttgc ttttattgcc cgccattttc ctgcgtttga aaagaatgtg aaaacaaatt
      481 ggcggggcgg gggaatgccc atgcggcaat tttacgtttt gggttatgag gataaccgtt
      541 ataatcacaa ctttacagtc tgcacggaga aaaccgatgc cttggaatct ccccatcttc
      601 ctcacatggt tgagggtctt gctcattcct gtcatgacag ccctttttta cctgcctttt
      661 ccgtggttcg cggaggaaac gattaatctc accgccgccg tcatttttgc cgttgccgcc
      721 ttaaccgact ggtttgacgg atttttggca agactgtgga aacagacttc cgatttcggc
      781 gccttcctcg atcccgtcgc cgacaagctg atggttgccg tatcgctact tttactggtc
      841 aaactcgacc ggacctatgt tttgtttgcc atgattatca tcggcaggga aattaccatt
      901 tccgcattgc gcgaatggat ggcgcaaatg ggcaaaagga acagcgttgc cgtcgccacc
      961 gtcggtaagt tcaaaaccgc cgcgcaaatg ctggcaatct tcctgctgct gctgaatatt
     1021 cccgattttt acggatttaa tcttgttgtt atcggcaatg tattgatgtt tatcgcatct
     1081 ttgctgacag tctggtcgat gctgtattat ctgaaaatgg cgtggaaaga aatcgcctga
     1141 aaaaaacata aaaatagctt gacggcaaaa acagaatcca taataattgc gtctcttcga
     1201 tgttggagaa tgaaatcggg cgggaatagc tcagttggta gagcgcaacc ttgccaaggt
     1261 tgaggtcgcg agttcgagac tcgtttcccg ctccaaaaat ttcattttcc cacaatcatt
     1321 gcgggaatag ctcagttggt agagcgcaac cttgccaagg ttgaggtcgc gagttcgaga
     1381 ctcgtttccc gctccaagtt ttatttcaaa cgtatcaacg cgggaatagc tcagttggta
     1441 gagcgcaacc ttgccaaggt tgaggtcgcg agttcgagac tcgtttcccg ctccaagttt
     1501 tttagataag ccagttttag ggcgagatag caaagtggtt atgcagcgga ttgcaaatcc
     1561 gtctacgccg gttcgattcc gactctcgcc tccattatcg tactatggcg gggtggcaga
     1621 gtgtttatgc tatgaggagt gcaatcttca tacaggccgg ttaaaatccg cgcccccgcc
     1681 tccacctttc acaaatgccc gggtggtgaa ataggtagac acaacggact taaaatccgt
     1741 cgggactaaa catcccgtgc cggttcgatt ccggctccgg gcaccaagct gaaaatgaca
     1801 atgccgctcc aagcggttat ttttttatct gtcggaaggt gatggacaat attgacatgt
     1861 tcatgcctga acaagaggaa atccaatcaa tgtggaaaga aattttactg aattacggta
     1921 ttttcctgct cgaactgctt accgtgttcg gcgcaattgc gctgattgtg ttggctatcg
     1981 tacagagtaa gaaacagtcg gaaagcggca gtgtcgtact gacggatttt tcggaaaatt
     2041 ataaaaaaca gcggcaatcg tttgaagcat tctttttaag cggggaagag gcaaaacatc
     2101 aggaaaaaga ggaaaagaaa aaggaaaagg cggaagccaa agcagagaaa aagcgtttga
     2161 aggagggtgg ggagaaatct gccgaaacgc aaaaatcccg cctttttgtg ttggattttg
     2221 acggcgattt gtatgcacac gccgtagaat ccttgcgtca tgagattacg gcggtgcttt
     2281 tgattgccaa gcctgaagat gaggttctgc ttagattgga aagtccgggc ggcgtggttc
     2341 acggttacgg tttggcggct tcgcagctta ggcgtttgcg cgaacgcaat attccgctga
     2401 ccgtcgccgt cgataaggtg gcggcgagcg gcggttatat gatggcgtgt gtggcggata
     2461 aaattgtttc cgctccgttt gcgattgtcg gttcggtggg tgtggtggcg gaagtaccga
     2521 atatccaccg cctgttgaaa aaacatgata tcgatgtgga tgtgatgacg gcgggcgaat
     2581 ttaagcgcac ggttactttt atgggtgaaa atacggaaaa gggcaaacag aaattccgac
     2641 aggaactgga ggaaacgcat cagttgttca agcagtttgt cagcgagaac cgccctcaat
     2701 tggatattga ggaagtggca acgggcgagc attggttcgg tcggcaggcg ttggcgttga
     2761 acttgattga cgagatttcg accagtgatg atttgttgtt gaaagcgttt gaaaacaaac
     2821 aggttatcga agtgaaatat caggagaagc aaagcctgat tcagcgcatt ggtttgcagg
     2881 cggaagcttc tgttgaaaag ttgtttgcca aacttgtcaa ccggcgggcg gatgtgatgt
     2941 agtttgccga acggatggaa atgccgtctg aagcgtgttc agacggcatt tttcaagttc
     3001 cggctttgat gttccgttcc aatcccccta tccgttgtcc gatgtctttc aaattggaat
     3061 attgttcgac caatcgcggc acgtcgtcca aactcatggc aaacatccac agataagtgc
     3121 cgaccgaata gacatgcccc gcgctgctgt agcctttgag cgtcatcatc acaaaagcaa
     3181 agccgaacaa aatacccatc gccgtgccga cgcagagata gccgaaggct tcgcggttgg
     3241 aaatcagcac acgcaggcgc gcaaccagtc cgtaatggcg gtacagctgc cgtcggtctc
     3301 cttttcggat aaagtggttg tcgcattcca agctgttgtt caggcggaaa tacaggtttt
     3361 cgctaatggc ggcaaaacgt ggcaaaagcc ataaaaacaa cgcaagtatg cccaccgccg
     3421 acacgccgac ccaaaattcc agcaccagca gcatgatgca cgcgccgaat atggatacga
     3481 cggatgtcgc ggcaatcggc aggtgttctt caaaaaagct gacaaactca cgcgacaggg
     3541 caacccgcgc agttaccgcc gaatgcggga cttgtcgctg ccgctgttcc aacacgaccg
     3601 gcacggcgat ttcggtataa atccgcgtaa acgtgcgcgt atcggcaatc cgccgcgccg
     3661 caccgaccag ccacatcaaa agcacaacta aagcgtacag caacgcctgc cacacctccc
     3721 ccgcaatcac ggcattgatc gcccggccgc caaacaccgg atacaccagc atcaaaaggt
     3781 tttccagtcc gaccagggaa aatgtgccaa tcaatcgctt gcggtgggtt tgggctatgt
     3841 gtttcaacat tttccacata tttgcccccc tattttttat tttccgagat tgttttttcc
     3901 atcacttcag ccagtgcatc caaatcggca aacagccggg ttgtgcgctt gtcgccgaat
     3961 gtggcaaata cttt
//
LOCUS       DAWKJW010000167         3952 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.167, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000167 DAWKJW010000000
VERSION     DAWKJW010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3952
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.167"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(544..1584)
                     /gene="queA"
                     /locus_tag="WJJ54_001726"
     CDS             complement(544..1584)
                     /gene="queA"
                     /locus_tag="WJJ54_001726"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEZ7342558.1"
                     /translation="MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMPLQDRVFGD
                     LPDYVEAGDVLVFNNTKVMKARLFGQKDSGGRIEALIERVLGNHTALAHIRSSKSPKP
                     GMGLVFEGGIRAVMVGREGELFCLRFEGGQTVYELLEQNGHLPLPPYIERAADADDDS
                     RYQTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGVETAEVTLHVGAGTFQPVRVEKIE
                     EHKMHSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTD
                     IFITPGYRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGD
                     AMVLGRNEGVVR"
     gene            1701..1958
                     /locus_tag="WJJ54_001727"
     CDS             1701..1958
                     /locus_tag="WJJ54_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HEZ7342559.1"
                     /translation="MRKIKLPAHFPQKPPFFDILLDIYRQLRENKHILTVVFHHRKTV
                     SEHHSARFAPLPQAGCFLKNQRNNPPEHRQPLKEQKWICAN"
     gene            1940..2395
                     /locus_tag="WJJ54_001728"
     CDS             1940..2395
                     /locus_tag="WJJ54_001728"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEZ7342560.1"
                     /translation="MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTIAAAPVYAA
                     PVPAAAPVVTPAAAPVAASAPAAAPAARDLSDAQKSPMVGTFYRAPGPNAAPFVEVGQ
                     QVKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPVEFGEPLFIIG"
     gene            2507..3868
                     /gene="accC"
                     /locus_tag="WJJ54_001729"
     CDS             2507..3868
                     /gene="accC"
                     /locus_tag="WJJ54_001729"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEZ7342561.1"
                     /translation="MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKDSLHVKL
                     ADESVCIGPAASAQSYLNVPAIIAAAEVSCADAVHPGYGFLAENADFAEQVEQSGFTF
                     IGPKPDTIRLMGDKVSAKHAMIAAGVPCVPGSDGALPDDGEEILKIADKVGYPVIIKA
                     SGGGGGRGMRVVEKKEDLLQSVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVIADE
                     HGNAIYLAERDCSLQRRHQKVIEEAPAPFITEKERAKIGNACADACKRIGYRGAGTFE
                     FLYEDGEFFFIEMNTRVQVEHPVTELITGVDIVQEQLRIAAGLPLQYKQKDIQVEGHA
                     FECRINAEDPYNFIPSPGPIESCHLPGGFGIRVDSHIYQGYRIPPYYDSLIGKICVHG
                     KTREQAMAKMRVALAELAVTGIKTNTPLHRDLFADAGFQKGGVSIHYLEHWLEDRKAK
                     QDK"
BASE COUNT          966 a         1198 c          968 g          820 t
ORIGIN      
        1 caagtggaaa aatacttggc agattatcag gcacacttgg aaaaagtgtt cggctaaaaa
       61 tttatcttat aaacaaacaa aggcagcctg aaagattgaa tggtctgcac ccctaaggtt
      121 ggactaacca accgactaag gtgcagatta tttagggcag aatcttcgaa ggctctggcg
      181 gtgggtatcg ccaaatagga aaccgtccga ttgctcgggc ggttttggtg gattattgac
      241 ttaaaagcaa caatcaaggc tagaatcatt ccagcatcaa tcgttacagt caattgcaaa
      301 ttgcctgctg aaatagagat ttgcattttg atgactcctg taaagtttca aacttgtcag
      361 gaatgcaaaa atccccttgt tggcagcatg gggatttttg cttatcccac cgctctttga
      421 gtttctcgcc tctcgcgcct gaatctatgt catacagttc ctttcattca aatcaacaaa
      481 agaatgccgt ccgaacgtcc gttgagacgg cacttgtctt cccccaatag acttgaggct
      541 gttctaacgt accacccctt cgttccgccc caaaaccatc gcatcgccgt agctgaagaa
      601 acggtattcg cgttcgaccg cataacgata cgcggcgcgg atatgaccca tacccgaaaa
      661 cgcgctgaca agcatcagca gcgtcgattt cggcagatgg aaattggtaa ccagcctgtc
      721 ggcaacatta aaacggtagc ccggcgtgat gaaaatatcg gtgtcgccct gccccgcttt
      781 cagacgaccc gtcgcacgcg cggcagactc gagggcgcgc atggaagtcg tgccgaccgc
      841 ccacacctta ttgccgcgcg ctttggcggc ttcaacggcg gcggcggttt cagacggcac
      901 ttcaaaccat tcgctgtgca ttttgtgttc ttcgattttt tccacacgca cgggctggaa
      961 tgtccccgca ccgacgtgca aggttacttc tgcggtttct acgcctttgt ctttcaggcg
     1021 gcgcaaaagt tcttccgtaa aatgcagacc cgccgtcggc gcggcgaccg caccctgata
     1081 tttggcataa acggtttgat aacggctgtc gtcatccgca tcagcggcac gttcgatata
     1141 aggcggcagg ggcaggtgtc cgttctgttc caaaagttcg taaacggttt gaccaccttc
     1201 aaaacgcagg cagaacagtt cgccctcacg cccgaccatc acggcgcgga tgccgccttc
     1261 aaacaccagc cccataccgg gcttggggga cttggacgaa cggatgtgcg ccagtgcggt
     1321 atggttgccc aacacgcgct caatcagggc ttcgatcctg ccgccgctgt ctttctgccc
     1381 aaacaaccgc gccttcatga ctttggtgtt gttgaacacc aaaacgtcgc ctgcctcgac
     1441 ataatcgggc aaatcgccga atacccggtc ttgcagcggc atatcgggca acgctaccaa
     1501 aagccgactg ctgccgcgca cttcgggcgg atgctgggca atcagctttt cgggcagggt
     1561 aaaatcaaaa tctgaaatat ccatttttac actctcgttc gggcaagccg ccattatacg
     1621 cactttagcc ctttttcaga cggcatcttt gtccgaaaaa ccaacagatt agaataaaca
     1681 ctcttaacct ggaacatctt gtgcgcaaaa tcaaacttcc tgcacatttc ccccaaaaac
     1741 cgccgttttt tgatatttta ctggacattt accgacaact tcgggaaaat aaacacattc
     1801 tcacggtcgt tttccaccac aggaaaaccg tatccgaaca ccattccgcc cggtttgcgc
     1861 cgttgccgca agccggctgt tttctgaaaa accaacgcaa caacccgccg gaacatcggc
     1921 agcctttaaa ggaacagaaa tggatttgcg caaattaaaa aaactgattg atttggttga
     1981 agaatcgggc atcgccgaaa tcgaagtaac cgaaggcgag gaaaaagtcc gcatcacccg
     2041 aaccatcgcc gccgcacccg tttacgccgc gcccgtacct gccgccgcgc cggtcgtaac
     2101 acctgccgcc gcacccgttg cggcatccgc gcccgccgcc gcacctgccg cccgcgattt
     2161 gtccgacgcg caaaaatcgc ctatggtcgg cacgttctac cgcgcacccg gcccgaatgc
     2221 cgcgcctttt gtcgaagtcg gccaacaagt taaagccggc gacacgctgt gcatcatcga
     2281 agcgatgaag ctgatgaacg aaatcgaagc cgaaaaatcc ggcacggtca aagaaatttt
     2341 ggtcgaaaac ggtacgcccg tcgaattcgg cgaaccgctc ttcatcatcg gataatcctg
     2401 ttttcagacg gcataaactt cctatgccgt ctgaaatgct ttcccccttc agcgttcccg
     2461 cacccttttt tacggacggg ttgccggaac cacaggaaca gtcatcatgc tgaaaaaagt
     2521 tttaatcgcc aaccgaggcg aaatcgcatt acgcgtactc cgtgcctgcc gcgaaatggg
     2581 cattgccacc gtcgccgtgc attccgaggc cgacaaagac agcctgcacg tcaaactcgc
     2641 cgacgaatcc gtgtgcatcg gccctgccgc ttccgcgcaa agctacctca acgtccccgc
     2701 cattatcgcc gccgccgaag taagctgcgc ggacgctgtc catccgggct acggtttcct
     2761 tgccgaaaac gccgatttcg ccgaacaggt cgagcagtcc ggctttacct ttatcggccc
     2821 gaaacccgac accatccgcc tgatgggcga caaagtctcc gccaaacacg cgatgatagc
     2881 ggcaggcgta ccctgcgtcc ccggttctga cggcgcattg cccgacgacg gcgaagaaat
     2941 cctcaaaatc gccgataaag tcggttatcc cgtcattatc aaagcctctg gcggcggcgg
     3001 cggtcgcggt atgcgcgtgg tcgagaaaaa agaagacctc ctccaatctg tcgaaatgac
     3061 caaggccgaa gcgggcgcgg cattcggcaa cccgatggtt tacatggaac gctatttgca
     3121 acgtccgcgc cacgtcgaaa tccaagtgat tgccgacgaa cacggcaacg ccatctacct
     3181 tgccgagcgc gactgttcgc tgcaacgccg ccaccaaaaa gtcatcgagg aagcaccggc
     3241 tccgttcatc actgaaaaag aacgcgccaa aatcggcaac gcctgtgccg acgcctgcaa
     3301 acgcatcggc taccggggcg cgggtacgtt tgagttttta tacgaagacg gcgaattttt
     3361 ctttatcgag atgaacacgc gcgttcaggt cgagcatccg gttaccgagc tcatcaccgg
     3421 cgtggacatc gtgcaggagc aactccgcat cgccgccggc ctgcctttgc aatacaaaca
     3481 aaaggatatt caagtcgaag gccacgcgtt tgagtgccgt atcaacgccg aagacccata
     3541 caacttcatc cccagcccgg gcccgattga aagctgccac ctgcccggcg gcttcggtat
     3601 ccgcgtggac agccacattt accaaggcta ccgcatccca ccgtactacg acagcctgat
     3661 cggcaaaatc tgcgtacacg gcaaaacgcg tgaacaggca atggcgaaaa tgcgcgtcgc
     3721 actcgccgag ctggcggtaa ccggcatcaa aaccaatacg ccgcttcacc gcgacctgtt
     3781 cgccgatgcg ggtttccaaa aaggcggtgt cagcatccac tatttggaac actggctgga
     3841 agatcgcaaa gccaaacagg acaagtaaac cgccgccgat atgccgtctg aagccgcccg
     3901 tccgcgttca gacggcattt cccttgcccc gcgccgtctg aaaccgattt cg
//
LOCUS       DAWKJW010000168         3903 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.168, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000168 DAWKJW010000000
VERSION     DAWKJW010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3903)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3903)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3903
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.168"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            346..3546
                     /gene="nalP"
                     /locus_tag="WJJ54_001730"
     CDS             346..3546
                     /gene="nalP"
                     /locus_tag="WJJ54_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endopeptidase autotransporter NalP"
                     /protein_id="HEZ7342562.1"
                     /translation="MRTTPTFPTKTFKPAAMALAVATTLSACLGGGGTSAPDFNAGGT
                     GIGSNSRATTAKSAAVSYAGIKNEMCKDRSMLCAGRDDVAVTDRDAKINAPPPNLHTG
                     DFTNPNDAYKNLINLKPAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGYNEN
                     YKNYTAYMRKEAPEDGDGKDIEASFDDEAVIETEAKPTDIRHVKEIGHIDVVSHIIGG
                     RSVDGRPAGGIAPDATLHIMNTHDGTKNEIMSAAIRNAWVKLGERGVRIVNNSFGTTS
                     RAGTADHFQIANSEEQYRQALLAYSGGDKTDEGIRLMQQSDYGNLSYHIRNKNMLFIF
                     SASNDAQAQPNTLTLLPFYEKDAQKGIITVAGVDRSGEKFNGSNHCGITAMWCLSAPY
                     EASVRFTRTNPIQIAGTSFSAPIVTGTAALLLQKYPWMSNDNLRTTLLTTAQDIGAVG
                     VDSKFGWGLLDAGKAMNGPASFPFGDFTADTKGTSDIAYSFRNDISGTGGLIKKGGSQ
                     LQLHGNNTYTGKTIIEGGSLVLYGNNKSDMRVETKGALIYNGAASGGSLNSDGIVYLA
                     DTDRSGANETVHIKGDLQLGGEGTLYTRLGKLLKVDGTAMTGGKLYMSARGKGAGYLN
                     RTGQRVPFLSAAKIGRDYSFFTNIETDGGLLASLDSVEKTAGSEGDTLSYYVRRGNAA
                     RTASAAAHSAPAGLKHAVEQGGSNLENLMVELDASESSATPETVETAAADRTDMPGIR
                     PYGATFRAAAAVQHANAADGVRIFNSLAATVYADSTAAHADMQGRRLKAVSDGLDHNA
                     TGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLGMGHSTWSEN
                     SANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGTLMQ
                     LGALGGVNVPFAATGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSLTEGTLVGLAGL
                     KLSQPLSDKAVLFATAGVERDLNGRDYTVTGGFTGATAATGKTGARNMPHTRLVAGLG
                     ADVEFGNGWNGLARYSYAGSKQYGNHSGRVGVGYRF"
BASE COUNT         1055 a         1059 c         1025 g          764 t
ORIGIN      
        1 gaaccgattc acttgttaaa gaatcgttct ctttgagcta aggcgaggca acgccgtact
       61 ggtttttgtt catccactat aactagggaa attcaaatta agttagaatt atccctataa
      121 gaaaaagccg tctaagccgg tataaacaaa ataaactcat tgagctattt gtcgaaagtt
      181 caaatttcca ttttaaaaca attagtaaaa tcgagtttat cctagttgtc caagacaacc
      241 cctataataa tataattcaa aatataaaaa tgggttacat ctaaacatta cggaattttt
      301 attccctcgc ctgaattcta ttgtcagatt caaggagacc tcatcatgcg aacgacccca
      361 accttcccta caaaaacttt caaaccggct gccatggcgt tagctgttgc aacaacactt
      421 tctgcctgct taggcggcgg cggcacttct gcgcccgact tcaatgcagg cggcaccggt
      481 atcggcagca acagcagggc aacaacagcg aaatcagcag cagtatctta cgccggtatc
      541 aagaacgaaa tgtgcaaaga cagaagcatg ctctgtgccg gtcgggatga cgttgcggtt
      601 acagacaggg atgccaaaat caatgccccc cccccgaatc tgcataccgg agactttaca
      661 aacccaaatg acgcatacaa gaatttgatc aacctcaaac ctgcaattga agcaggctat
      721 acaggacgcg gggtagaggt aggtatcgtc gacacaggcg aatccgtcgg cagcatatcc
      781 tttcccgaac tgtatggcag aaaagaacac ggctataacg aaaattacaa aaactatacg
      841 gcgtatatgc ggaaggaagc gcctgaagac ggagacggta aagacattga agcttctttc
      901 gacgatgagg ccgttataga gactgaagca aagccgacgg atatccgcca cgtaaaagaa
      961 atcggacaca tcgatgtggt ctcccatatt attggcgggc gttccgtgga cggcagacct
     1021 gcaggcggta ttgcgcccga tgcgacgcta cacataatga atacgcatga tggaaccaag
     1081 aacgaaataa tgtctgcagc catccgcaat gcatgggtca agctgggcga acgtggcgtg
     1141 cgcatcgtca ataacagttt tggaacaaca tcgagggcag gcactgccga ccatttccaa
     1201 atagccaatt cggaggagca gtaccgccaa gcgttgctcg cctattccgg cggtgataaa
     1261 acagacgagg gtatccgcct gatgcaacag agcgattacg gcaacttgtc ctaccacatc
     1321 cgtaataaaa acatgctttt cattttttcg gcaagcaatg acgcacaagc tcagcccaac
     1381 acactgaccc tattgccatt ttatgaaaaa gatgctcaaa aaggcattat cacagtcgca
     1441 ggcgtagacc gcagtggaga aaagttcaat ggctccaacc attgcggaat tactgccatg
     1501 tggtgcctat cggcacccta tgaagcaagc gtccgtttca cccgtacaaa cccgattcaa
     1561 attgccggaa catccttttc cgcacccatc gtaaccggca cggcggctct gctgctgcag
     1621 aaatacccgt ggatgagcaa cgacaacctg cgtaccacgc tgctgacaac ggctcaggac
     1681 atcggtgcag tcggcgtgga cagcaagttc ggctggggac tgctggatgc gggtaaggcc
     1741 atgaacggac ccgcgtcctt tccgttcggc gactttaccg ccgatacgaa aggtacatcc
     1801 gatattgcct actccttccg taacgacatt tcaggcacgg gcggcctgat caaaaaaggc
     1861 ggcagccaac tgcaactgca cggcaacaac acctatacgg gcaaaaccat tatcgaaggc
     1921 ggttcgctgg tgttgtacgg caacaacaaa tcggatatgc gcgtcgaaac caaaggtgcg
     1981 ctgatttata acggggcggc atccggcggt agcctgaaca gcgacggcat tgtctatctg
     2041 gcagataccg accgatccgg cgcaaacgaa accgtgcaca tcaaaggcga tctgcagctg
     2101 ggcggcgaag gtacgctgta cacacgtttg ggcaaactgc tgaaagtgga cggtacggcg
     2161 atgaccggcg gcaagctgta catgtcggca cgcggcaaag gggcaggcta tctcaaccgt
     2221 accggacaac gtgttccctt cctgagtgcc gccaaaatcg ggcgggatta ttctttcttc
     2281 acaaacatcg aaaccgacgg tggtctgctg gcttccctcg acagcgtcga aaaaacagcg
     2341 ggcagtgaag gcgacacgct gtcctattat gtccgtcgcg gcaatgcggc acggactgct
     2401 tcggcagcgg cacattccgc gcccgccggt ctgaaacacg ccgtagaaca gggcggcagc
     2461 aatctggaaa acctgatggt cgaactggat gcctccgaat catccgcaac acccgagacg
     2521 gttgaaactg cggccgccga ccgcacagat atgccgggca tccgccccta cggcgcaact
     2581 ttccgcgcag cggcagccgt acagcatgcg aatgccgccg acggtgtacg catcttcaac
     2641 agtctcgccg ctaccgtcta tgccgacagt accgccgccc atgccgatat gcagggacgc
     2701 cggctgaaag ccgtatcgga cgggttggac cacaacgcta cgggtctgcg cgtcatcgcg
     2761 caaacccaac aggacggtgg aacgtgggaa cagggcggtg ttgaaggcaa aatgcgcggc
     2821 agtacccaaa ccgtcggcat tgccgcgaaa accggcgaaa atacgacagc agccgccaca
     2881 ctgggcatgg gacacagcac atggagcgaa aacagtgcaa atgcaaaaac cgacagcatt
     2941 agtctgtttg caggcatacg gcacgatgcg ggcgatatcg gctatctcaa aggcctgttc
     3001 tcctacggac gctacaaaaa cagcatcagc cgcagcaccg gtgcggacga acatgcggaa
     3061 ggcagcgtca acggcacgct gatgcagctg ggcgcactgg gcggtgtcaa cgttccgttt
     3121 gccgcaacgg gagatttgac ggtcgaaggc ggtctgcgct acgacctgct caaacaggat
     3181 gcattcgccg aaaaaggcag tgctttgggc tggagcggca acagcctcac tgaaggcaca
     3241 ctggtcggac tcgcgggtct gaagctgtcg caacccttga gcgataaagc cgtcctgttt
     3301 gcaacggcgg gcgtggaacg cgacctgaac ggacgcgact acacggtaac gggcggcttt
     3361 accggcgcga ctgcagcaac cggcaagacg ggggcacgca atatgccgca tacccgcctg
     3421 gttgccggtc tgggcgcgga tgtcgaattc ggcaacggct ggaacggctt ggcacgttac
     3481 agctacgccg gttccaaaca gtacggcaac cacagcggac gagtcggcgt aggctaccgg
     3541 ttctgacgga caggaagcag acagccgcaa agatcacggt ctttgcggct gtttcttatg
     3601 aaaagaaaac cctattccaa ttgcctgctt ctattgtttc aagacttctt ccaaagattc
     3661 ggcattaatc agatgtatag cggattaaca aaaatcagga caaggcggcg aagccgcgga
     3721 cagtacaaat agtacggaac cgattcactc ggtgcttcag caccttagag aatcgttctc
     3781 tttgagttaa ggcgaggcaa cgccgtactg gtttttgtta atccgctata ttccaccatc
     3841 tctaagattt acagcgatac acaggtaatt taaggaatgc ccgaaccgtc attcccgcca
     3901 ctt
//
LOCUS       DAWKJW010000169         3891 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.169, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000169 DAWKJW010000000
VERSION     DAWKJW010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3891)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3891)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3891
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.169"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            520..1476
                     /gene="thiL"
                     /locus_tag="WJJ54_001731"
     CDS             520..1476
                     /gene="thiL"
                     /locus_tag="WJJ54_001731"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEZ7342563.1"
                     /translation="MKEFDFIKRYLQTGTDNDVVLGIGDDAAIVRPREGFDLCFSADM
                     LLKDRHFFANVKPEDLAWKVLAVNVSDMAAMGAIPRWVLLSAALPELDEVWLKRFCGS
                     FFGLAKKFGVTLIGGDTTKGDMAFNVTIIGELPKGRALRRDAAVAGDDIWVSGRVGMA
                     AAALNCRLKRCVLPDDVFAECEQKLLRPEPRVGLGLALLPFARAAQDVSDGLAQDLGH
                     ILTASGVGAEIWADSLPSLSVLKDILPRAQWLSYTLAGGDDYELVFTAPESCRSRVLD
                     AAERCGVPVTRIGKINGGCRLKVLDADGRELELHSLGFDHFG"
     gene            1469..1954
                     /locus_tag="WJJ54_001732"
     CDS             1469..1954
                     /locus_tag="WJJ54_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HEZ7342564.1"
                     /translation="MADFKPDFAWLLKRPLCFLAFGFGSGLAPFAPGTFGTLAALPLA
                     FVLILLGIDGLLLAFLCIVLFMWGIRICAYAERETGVSDHGGIVWDEIVAMLFVLAFV
                     PFRWTWWLAAFVLFRLFDALKPSPVGWFDKNLHGGLGIMADDMAAAVMTLIVLRIAML
                     F"
     gene            complement(2014..3690)
                     /gene="ettA"
                     /locus_tag="WJJ54_001733"
     CDS             complement(2014..3690)
                     /gene="ettA"
                     /locus_tag="WJJ54_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEZ7342565.1"
                     /translation="MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGA
                     GKSTVLRIMAGVDKEFEGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQ
                     KRLEEVYAEYANPDADFDALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPEWD
                     AKIDNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAV
                     THDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQEL
                     EWVRQNTKGRQAKSKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSK
                     SFGDKVLIDDLSFKVPAGAIVGIIGPNGAGKSTLFKMISGKEQPDSGEVKIGQTVKMS
                     LIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKIAGQLSG
                     GERGRLHLAKTLLSGGNVLLLDEPSNDLDVETLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGTKPKRIKYKPVTR"
BASE COUNT          799 a          946 c         1079 g         1067 t
ORIGIN      
        1 cttagagaat cgttctcttt gagctaaggc gagccaacgc tgtactggtt taaatttaat
       61 ccactatatc ggttgaaact ctgattttaa ggcggtagga tgtgggtttg cccatagaaa
      121 gggaatcctt tctgtatcaa gccctgaaag ggataattca tacaaattca cgcctttccc
      181 cttcattggg aaatggatgg aatcgtgcca gatgtgtgcg gcactgtatg ccggatatgg
      241 ttttatcatc agcccttttc ggttgaaacc ccgtcagttg cagcgattga gcctaatcgg
      301 tggcggaagt tgccgctttg cattcggggt ggcgtgcagt gcggtacttt gatatgccgt
      361 ttgtgtgttg aaacagggtg gtcggtgcat acgggtacgg tatggccaaa gctaaaagtg
      421 aaatacgctg aaacactgaa tgagccgctt tattgtttgt acggcctttg ctgccttgct
      481 atgatttaaa ttggattcgc ccgccggata ttttgggata tgaaagaatt tgacttcatc
      541 aaacggtatt tgcaaacagg cacggataat gatgtcgtat tgggcatagg cgacgatgcg
      601 gcgattgtcc gcccgcgtga aggcttcgat ttgtgtttca gtgcggatat gcttttgaag
      661 gacaggcatt tttttgcaaa tgtcaaacct gaagacttgg cttggaaggt tttggccgtc
      721 aatgtttcgg atatggcggc gatgggtgcg ataccgcgtt gggtgttgct gagcgcggcg
      781 ttgcccgaat tggatgaggt atggctgaaa cggttttgcg gcagcttttt cggtttggca
      841 aaaaagtttg gcgtaacgtt aatcggcggc gatacgacca agggcgatat ggcgttcaat
      901 gtaaccatta tcggcgaatt gccgaagggt agggcgttgc ggcgtgatgc ggcggttgcg
      961 ggcgacgata tttgggtgtc ggggcgtgtc ggtatggcgg cggcggcttt gaactgccgt
     1021 ctgaaacggt gtgtgttgcc ggatgatgtg tttgctgaat gcgaacaaaa gctgctccgc
     1081 cccgagccaa gggttgggct ggggcttgcg ctgttgccgt ttgcccgggc ggcgcaggat
     1141 gtttcagacg gcctcgcgca agatttgggg catatcctga ccgcttccgg cgtgggggcg
     1201 gaaatttggg ccgattcgct gccgtcttta tccgtattga aagatatttt gccccgagcg
     1261 caatggctgt cttatacttt ggcgggcggc gacgattacg agctggtgtt taccgcgccg
     1321 gaaagttgcc gcagccgcgt gcttgatgcg gcagaacggt gcggcgtgcc ggtaacgcgc
     1381 atcggcaaaa tcaacggagg atgccgtctg aaggttttag atgccgacgg cagggaattg
     1441 gaactacatt ctttaggatt cgatcatttt ggctgatttt aaacctgact ttgcgtggct
     1501 gttgaaacga ccgttgtgtt ttttggcttt tggtttcggc agcgggctgg ctccgttcgc
     1561 gccgggtaca tttggcactt tggcggcact gcctttggca tttgtgctga ttttgctcgg
     1621 catagacggg ctgctgctgg cttttttgtg tatcgtgctg tttatgtggg gcatacgcat
     1681 ttgcgcttat gcggaacgtg aaacgggtgt cagcgaccat ggtgggattg tttgggacga
     1741 gattgtcgcc atgctgtttg tgctggcgtt tgtgccgttc aggtggacgt ggtggctggc
     1801 ggcatttgtc ctattccgtc tgtttgacgc gctcaaaccg tctcccgtcg gttggtttga
     1861 caagaatctg cacggcggtt tgggcattat ggcggacgat atggcggctg cggtgatgac
     1921 tttgattgtc ttgaggattg caatgctgtt ttaaacggtg ctgccttgta aaaatgccgt
     1981 ctgaaagcct ttcagacggc attgtttcgg aggttaacgc gttaccggtt tgtatttgat
     2041 gcgtttcggt ttcgtgcctt cttcgccgag tcggcgtttc ttgtcggctt cgtattcctg
     2101 atagttgccg tcaaagaaca cccatttgga gtcgccttcg caagccaaga tatgcgtagc
     2161 aatacggtcg aggaaccagc ggtcgtgcga aatcaccatc acgctgccgg caaattccag
     2221 caatgcatct tccagcgcgc gcagggtttc cacgtcgagg tcattagacg gttcatccag
     2281 cagcaataca ttgccgccgc tcaacaaggt tttcgccaag tgcaaacgtc cgcgttcgcc
     2341 gcctgacaat tgacctgcga ttttgctttg gtcgctgcct ttaaagttga aacgacccaa
     2401 atattggcgg gcgggaattt caaactgacc aacctgcaaa atgtcgcggc cttcggcgat
     2461 gttgtcgaac acggttttgt cgttttgcaa accttcgcgg ctttggtcaa tcaagctcat
     2521 tttcacggtt tggccgattt tcacttcgcc ggaatcaggc tgctctttgc ccgaaatcat
     2581 tttgaacagc gtcgatttac ccgcgccgtt cgggccgatg atgccgacaa tcgcgccagc
     2641 aggtactttg aagctcaaat catcaatcag cactttatcg ccaaacgatt tggaaacatt
     2701 cacaaattca atcacttcgt tacccaaacg ctcggcaacg ggaataaaga tttcctgcgt
     2761 ttcattgcgt ttttggtatt cgtagttgct catttcctca aaacgcgcca aacgcgcttt
     2821 ggacttggct tggcggcctt tggtattttg gcgcacccat tccaattcct gcttcatcgc
     2881 tttcacgcgc gcagcttcgg atttcgcctc gttttccaag cgtttttctt tctgctccag
     2941 ccaagacgag taattgcctt tccacggaat accgtgcccg cggtcaagtt ccaaaatcca
     3001 ttcggcggcg ttgtcgagga agtagcggtc gtgtgttacc gcaacgactg taccggggaa
     3061 gcgcacgaga aattgctcca gccactcgac agattccgcg tccaagtggt tggtcggctc
     3121 gtccagcaaa agcatatcgg gtttgctcaa caagagtttg cacaaggcaa cgcggcgttt
     3181 ttcaccgccg gacaaattat cgattttggc atcccattcc ggcaggcgca gcgcgtcggc
     3241 ggcgatttcc aattcgtgtt ccgcaccgcc gcccgtggac gaacccgccg caataatcgc
     3301 ttccaagcgg ccctgctctt ctgccaacgc gtcaaaatcc gcatcaggat tggcgtactc
     3361 ggcatacact tcttccaaac gtttctgcgc ggcagccact tcgcccaaac cgctttccac
     3421 ttcctcgcgc acggtttttt caggatcaag ctcaggctct tgcggcaggt agccgatttt
     3481 aatgccgccc atcggcacgg cttcgccctc aaattcctta tccacacccg ccataatccg
     3541 cagcacggtg gacttgcccg cgccgttcaa accgagcagg ccgattttcg cgccggggaa
     3601 gaaagaaagg gaaatatctt taatgatggt tttctgcggc ggcacaacct tgctcacgcg
     3661 cagcatagaa tagacgtatt gttgggacat ggttttctcg ttttcatcaa acaaatttca
     3721 gacggccatt ttaaccgata atttgattta agccagttta tccgcgaacc ggtattgcca
     3781 aaatcgggca ggattcataa aatccgctta tccctttgaa attatataga caaaaaaata
     3841 ataatgatag gggatcgccg ccccggcaac catttcggat tttccaaagc a
//
LOCUS       DAWKJW010000170         3876 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.170, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000170 DAWKJW010000000
VERSION     DAWKJW010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3876)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3876)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3876
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.170"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(88..906)
                     /locus_tag="WJJ54_001734"
     CDS             complement(88..906)
                     /locus_tag="WJJ54_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ7342566.1"
                     /translation="MKGMDKLRYQQDFLNIRPIFTAGEQEYLTELSDRLPLSVLTDSV
                     RNIEEIGIDFVYSSAKLEGNTYNQYDTQALLKLGQTAGGKLYSDAVMLINLRESYRHL
                     LSGLDSPDPFDWLDFLKTTHSLISENLLEKGSGGVVRRDSVTISGTDYTPLSNPQSLD
                     TELKWLLQEAPKIGNPFDRAVYLHNNLAYLQYFKDCNKRTARNCMTLSLMRSGFFPCV
                     FAPDSYPAYAEAVVAYYETGDYGLFKKYFISAYENTVNKYGPQPDVDIFRNFSL"
     gene            complement(986..2236)
                     /locus_tag="WJJ54_001735"
     CDS             complement(986..2236)
                     /locus_tag="WJJ54_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ7342567.1"
                     /translation="MTKLTRRQIIRRTAGTLFALSPIASAVAKTVRAPQFTAVRIWPS
                     HTYTRLTLESTAALKYQHFTLDNPGRLVVDIQNANINTVLHGLSQKVMADDPFIRSIR
                     AGQNTPTTVRLVIDLKQPSYAQVFSLPPVGGFKNRLVVDLYPQGMDPDDPMMALLNGS
                     LNKTLRGSPEADLAQNTTPQPGRGRNGRRPVIMIDPGHGGEDPGAVSPGGLQEKHVVL
                     SIARETKKQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSAR
                     GTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSR
                     KLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESF
                     RRQCAQSIASGVQRYLNTSVLKRG"
     gene            complement(2233..2694)
                     /gene="tsaE"
                     /locus_tag="WJJ54_001736"
     CDS             complement(2233..2694)
                     /gene="tsaE"
                     /locus_tag="WJJ54_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEZ7342568.1"
                     /translation="MSDLPSISRFLADEAATLDLGAAWSSRLNAPLVIYLEGDLGAGK
                     TTLTRGILRGLGHQGAVKSPTYAIVESYLLERFTLHHFDLYRFSFPEEWEDAGLDELF
                     AANSVCLIEWPQQGGEFTPPADITATLTHDGDGRKCLLTAHTERGRESLPL"
     gene            2896..3708
                     /locus_tag="WJJ54_001737"
     CDS             2896..3708
                     /locus_tag="WJJ54_001737"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEZ7342569.1"
                     /translation="MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARV
                     PYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVIS
                     AGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGW
                     LEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAHNVALVDSAITTAEE
                     TARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG"
BASE COUNT          854 a          961 c         1139 g          922 t
ORIGIN      
        1 cactataacc gaaggtaagg gaggggcgtg tccattttgc cgccgcattt gccgcgtgcg
       61 gaagatacgg ataacaaccc cttggaatta aagggagaag ttgcggaaaa tatccacatc
      121 aggctgtggg ccgtacttat ttacggtatt ttcgtatgct gaaataaaat atttcttgaa
      181 taaaccgtaa tcgccggttt cgtaataggc tacgacagcc tcggcatagg cgggataact
      241 gtcgggggcg aatacgcaag gaaaaaaacc ggagcgcatc agcgataggg tcatgcagtt
      301 tctggcagta cgtttattgc aatctttaaa atattgaaga tacgccaaat tattatggag
      361 ataaacggcg cggtcgaagg gatttcctat ttttggggct tcttgaagca accattttaa
      421 ttccgtatcc aaactttgcg ggttggataa aggcgtgtag tctgtcccgc ttatggtaac
      481 gctgtcgcgg cggactacgc cgccggagcc tttttccagt aagttttccg aaatcaggct
      541 gtgggtggtt tttaagaaat ccaaccagtc aaacggatcg gggctgtcca aaccggacag
      601 caggtgccgg taactttccc tcaggttgat taacattacg gcatccgaat ataacttccc
      661 gcctgcggtt tgcccgagtt taagcaatgc ctgcgtatcg tattgattat aagtgtttcc
      721 ttccaatttg gcagaactgt acacaaaatc gataccgatt tcttcaatat tacgcacgga
      781 gtccgttaaa acagataaag gaagccgatc ggacaattcg gtcaggtatt cttgttcgcc
      841 ggctgtaaaa atggggcgga tatttaaaaa atcctgttgg tatctcaatt tatccatacc
      901 tttcatcata aaaacgcggt ttggggcgga agtaggttta tgcctgcctt catccgacaa
      961 ctatattgaa acaccgcctt ttcaatcaac cccgcttcaa tacggatgta ttgaggtagc
     1021 gttggacacc cgaggcaatg gattgggcgc actgccggcg gaaggattcg ctgcccagca
     1081 gcttctcttc ggcaggattg gacaggaagg cggtttcgac caggatagac ggcatatcgg
     1141 gtgcgcgcaa aacggcgaaa ttggcttcgt ccaccctgcc tttgtgcaag tggttgagcc
     1201 tgcccaattc ttcaagcacc agtttgccga gtttgcggct gtcacgcagc gtggcggttt
     1261 gggtcatgtc gagcagggcg gtatcgacgt tgcggttgcc gctggtcggt acgccgccga
     1321 ccgcgtcggc attgttttgg gtttgttcca agaatttggc ggcggagctg gtcgcgcctt
     1381 tggtgtttaa catataaacc cccgtgccgc gcgcggaggg gctggtgaag gcatcggcgt
     1441 ggatggagac aaatacgtcc gcccgccgtg cgcgcccttt ggcgacacgc acgcccaatg
     1501 ggatgaacac gtcttcgttg cgcgtcataa agacgttgta acccaaggct tccaattgtt
     1561 ttttggtttc gcgggcgatg gagaggacga cgtgtttttc ctgcaaaccg cccgggctga
     1621 cggcgccggg gtcttcgccg ccgtgtccgg ggtcgatcat aatgacgggt ctgcgtccgt
     1681 ttctgccgcg cccgggttgg ggcgtggtgt tttgggcgag gtcggcttcg ggagagccgc
     1741 gcagggtttt attcaggctg ccgttaagca gcgccatcat cggatcgtcg ggatccatcc
     1801 cttgcggata gagatcgacg acgaggcggt ttttaaagcc gccgacgggg gggagggaaa
     1861 aaacttgcgc gtaggaaggc tgtttcaaat cgatgacgag gcggacggtg gtcggcgtgt
     1921 tctgacccgc gcgtatgctg cggataaaag ggtcgtccgc cataaccttc tgagacagtc
     1981 cgtgcaatac ggtattgatg ttcgcgtttt gtatgtcgac gaccaacctg cccgggttgt
     2041 cgagcgtgaa gtgttggtat ttgagcgcgg cggtgctttc cagcgtcagg cgggtgtagg
     2101 tgtgcgacgg ccatatccgt acggcggtaa actgcggggc gcgtaccgtt ttggcaacgg
     2161 cggatgcgat ggggcttagg gcgaacagtg tgccggcggt gcggcggatg atttgtcttc
     2221 gtgtcagttt ggtcatagcg gcaggctttc gcgtcctcgt tcggtatggg cggtcagcag
     2281 gcattttctg ccgtcgccgt cgtgtgtcaa tgttgcggtg atgtcggcag gcggggtaaa
     2341 ttccccacct tgttgcggcc attcgatcag gcagacgctg tttgcggcaa acagttcgtc
     2401 caatccggca tcttcccatt cttcggggaa cgagaagcgg tagaggtcga aatggtgcaa
     2461 ggtgaagcgt tccagcagat aagattcgac gatggcgtaa gtcgggcttt tgactgcgcc
     2521 ctgatgaccc aatccgcgca ggatgccgcg tgtcagcgtg gttttgcccg cacccaaatc
     2581 cccctcgaga taaatgacca gcggcgcgtt taaacgggaa gaccacgccg cacccaaatc
     2641 gagtgtggcg gcttcgtcgg caaggaatcg ggagatagag ggtaaatcag acatggaaac
     2701 ggtttgttgt aaggtctagg gtattatggg cagttttgca ggttttgcaa actttgcacc
     2761 cgaggggcgg atgcttcttg tccgagcatt ataacagcca aatccgcgtt ctgctttcag
     2821 acggcaacgg ctgtcaagaa aaagcggcgc gtgtacaata cgcggattgt atgtttagga
     2881 cagattggaa aaaggatgga aaatatcggc aggcagcgac ccatcggcgt ttttgactcg
     2941 ggaatcggcg gtttgaccaa tgtgcgcgcg ctgatggagc ggctgccgat ggagaacatc
     3001 atttatttcg gcgacacggc gcgcgtgcct tacgggacga aatctaaggc gaccatcgaa
     3061 aatttctcga tgcagattgt cgattttctg ctggaacacg atgtcaaggc gatggttatc
     3121 gcgtgcaaca cgattgcggc ggtggcgggg cagaaaatcc gtcaaaagac gggcaatatg
     3181 cctgtgttgg acgtgatttc cgccggcgcg aaagccgcgc tggcaacgac gcgcaacaat
     3241 aaaatcggca ttatcgccac caataccaca gttaacagca atgcttatgc gcgcgccatc
     3301 cataggaaca accctgatac gctcgtccgc acgcaggctg caccgctgct cgtccctttg
     3361 gtggaggaag gttggttgga acatgaagtt acccgcctga ccgtatgcga atacctcaaa
     3421 ccattgcttg cagacggcat cgatacgctg gtgttgggct gcacgcactt tcccttgctc
     3481 aaacccttaa tcggcaggga ggcgcacaat gtcgcgttgg tcgattccgc gattacgact
     3541 gccgaagaaa ccgcacgcgt ccttgcgcag gagggattac tcaataccga caacaacaat
     3601 cccgactacc gtttttacgt cagcgatatt cctttgaaat tcagaaccat cggcgagcgt
     3661 tttctgggca ggacgatgga gcagattgaa atggtgtctt tgggttagcg gcaggtacgg
     3721 acggaaaccg tccccgtccg cgccatccgc atacgcaccc gcaacgccct gccgtattaa
     3781 acgccccgtc gccgcaaatg ccgtctgaaa ggcttcagac ggcatttttt acacaattcc
     3841 caccgtttcc catccttctc gatacactgt aatctc
//
LOCUS       DAWKJW010000171         3744 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.171, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000171 DAWKJW010000000
VERSION     DAWKJW010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3744
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.171"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(442..527)
                     /locus_tag="WJJ54_001738"
     tRNA            complement(442..527)
                     /locus_tag="WJJ54_001738"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(491..493),aa:Leu,seq:gag)
     gene            complement(541..891)
                     /gene="secG"
                     /locus_tag="WJJ54_001739"
     CDS             complement(541..891)
                     /gene="secG"
                     /locus_tag="WJJ54_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEZ7342570.1"
                     /translation="MEAFKTLIWIVNIISALAVIVLVLLQHGKGADAGATFGSGSGSA
                     QGVFGSAGNANFLSRSTAVAATFFFATCMAMVYIHTHTTKYGLDFSNVQQTQQAPKPV
                     SNTEPSAPVPQQQK"
     gene            complement(898..1671)
                     /locus_tag="WJJ54_001740"
     CDS             complement(898..1671)
                     /locus_tag="WJJ54_001740"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEZ7342571.1"
                     /translation="MYHQIGMWDQKWVIGNWKMNGRLQNNNSLMHRFRILPTAERVLI
                     GLAAPTVYLLQLHNAMQIVLNNRILTCAQDVSRFPDNGAYTGEVSAEMLADTGTDIVL
                     IGHSERSLYFGEKNEIQRRKMENVLNVGLIPLLCVGESLEEREAGKEHEVIAHQLSIL
                     QGLDTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSV
                     KADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQNA"
     gene            1855..2358
                     /locus_tag="WJJ54_001741"
     CDS             1855..2358
                     /locus_tag="WJJ54_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEZ7342572.1"
                     /translation="MHALHFSASDKAALYREVLPQIESVVADETDWVANLANTAAVLK
                     EAFGWFWVGFYLVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGGTVVVGDVNA
                     YPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEHLAQFDETDALYLGELAKILEKRF
                     EASRQAV"
     gene            2461..3117
                     /locus_tag="WJJ54_001742"
     CDS             2461..3117
                     /locus_tag="WJJ54_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEZ7342573.1"
                     /translation="MDFEKARFNMVEQQIRPWDVLDFDVLDALAEIPRELFVDEDLQG
                     LAYADMELPLANGHKMLEPKVVARLAQGLKLTKNDTVLEIGTGSGYATALLAKLAGRV
                     VSDDIDAEQQNRAKAVLDGLGLDNIDYVQNNGLTELSAGAPFDAVYVGGAVNIVPDVL
                     KQQLKDGGRMVVIVGRKPVQRALLITRKGDVFEEKVLFDTLVAHLDDKDTDPFGGFDF
                     "
     gene            3197..3520
                     /locus_tag="WJJ54_001743"
     CDS             3197..3520
                     /locus_tag="WJJ54_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEZ7342574.1"
                     /translation="MDIVQLGPAELKAWMDEGRMFCLLDVRTDEETAVCSLPNALHIP
                     MNLIPLRQNELPDDVPLVVYCHHGIRSLHTAMYLADAGFENLYNLQGGIDAWAAEIDG
                     NMMRY"
BASE COUNT          755 a          789 c         1178 g         1022 t
ORIGIN      
        1 attttttatc tttttcttat tttatagtga attaaattta aaccggtacg gcaaggcgag
       61 gcaacgccgt accggtttaa atttaatcca ctatagtata ggttttttcc aaaaacccaa
      121 aaaaaaccgc tctgcatctt ggacggtttc cccctcattc cctacggtgc gtcagtattc
      181 cccgcaagct atttctcgct tggcattcct gatttggtgg tcgttcagct ttatttttac
      241 ggtattttct cgcggtattt tcggatgctg taaaaaatca ggttagttca attagggcgg
      301 attggacggg attgcactgt caggaagggg gacggcagga taacaatcag cctgaaatcc
      361 ttgtattgat tgggattggt tgacggcatt agacaggatt aaacgaaaaa aacgcttaga
      421 atttctaagc gttttgtgtg ttggtgccga cagcgagatt tgaactcgca cagcctacgg
      481 ccactacccc ctcaagatag cgtgtctacc aatttcacca tgtcggcatt tgaaaaactg
      541 ttatttctgc tgctgaggaa caggggcaga aggttcggta ttgcttacgg gtttgggtgc
      601 ttgctgagtt tgttgtacgt tgctgaagtc caaaccgtat tttgtcgtgt gggtgtgaat
      661 atacaccata gccatgcagg ttgcaaagaa aaatgttgct gcaacggcgg tcgaacggct
      721 gaggaagtta gcgttgccgg cagagccgaa tacgccttgc gcgctgccgc ttcccgatcc
      781 gaaggtcgcg ccggcatccg cgcctttgcc gtgttggagc aatactaaca cgatgacggc
      841 caaagcggaa attatattaa caatccaaat tagggttttg aaggcttcca tatttttcta
      901 cgcattttgt gcggcactga tgatggcggt aaaggagtcg tacgacaatg acgcgccgcc
      961 gacgagtgcg ccgtccacat aaggtactgc gaagatgtcg gccgcgttgt ccgctttcac
     1021 acttccgccg taaaggacgc ggattttaac atcgcttccg cacaaagaca agatttcttt
     1081 gtagatgaat gcgtgcatat cggcaatctg ttcgacggtg gcgactttgc cggtgccgat
     1141 cgcccagacg ggttcgtagg cgacggcgat gtttttggta tccagccctt gcaggatgga
     1201 aagctgatgg gcgatgactt cgtgttcttt gccggcttcg cgctcttcga ggctttcgcc
     1261 gacgcacaat aacgggatga gtccgacgtt gaggacgttt tccattttgc ggcgttggat
     1321 ttcgtttttt tcgccgaaat aaaggctgcg ttcggagtgt ccgatgagga cgatgtctgt
     1381 gccggtgtcg gcgagcattt cggcggacac ttcgccggtg tacgcgccgt tgtcggggaa
     1441 gcggctcacg tcttgggcgc aggtgaggat gcggttgttt aagacgattt gcatggcgtt
     1501 gtgcagttgc agcaggtaaa cggtcggggc ggcgagtccg atgaggacgc gttcggcggt
     1561 ggggaggatg cggaagcggt gcatgagcga attgttgttc tggagccggc cgttcatttt
     1621 ccagttgccg atgacccatt tttgatccca cattccgatt tggtgataca tcttttttgc
     1681 tccgtgtcgt gttttttctg tctgccgcgt gtggcgcgtt gcaatgtgaa gtttagtgga
     1741 tatgcggcgg gttcgcaact tggggcgggc ggctgcgggg gcggtttggc atgttgtttc
     1801 gggcaggttg ttttataatg gccgcctgat atgtatgcaa ctataggaga tgtgatgcac
     1861 gcgcttcatt tttcggcttc ggacaaggcc gcgctttatc gggaggtgtt gccgcagatt
     1921 gagtctgtgg tggcggacga gacggattgg gtggcgaatt tggcgaacac ggcggcggtt
     1981 ttgaaggagg cgttcggttg gttttgggtg ggtttttatt tggtcgatac gcgttcggac
     2041 gaattggttt tggcaccgtt tcaggggcct ttggcgtgta cgcggattcc gttcggacgc
     2101 ggggtgtgcg gtcaggcttg ggcgaagggc gggacggtgg tcgtcgggga tgtcaacgcg
     2161 tatcccgacc atattgcctg ttcgtctttg tcgcgttcgg agattgtcgt gccgctgttt
     2221 tcagacggac gctgtatcgg cgtgttggac gcggacagcg aacatttggc gcagtttgat
     2281 gagacagatg ctttgtattt gggcgaactg gcgaagattt tggagaagcg gtttgaggct
     2341 tcgcgtcagg cggtttgaga ctggcaaaac gagctgtcgg cgcgtgccga agttggcgcg
     2401 gcgggagtgt ggttttataa tgcctgctat tgttggaaca attatttgac ggagcactaa
     2461 atggattttg aaaaagcgcg gttcaatatg gtcgaacagc aaatccgtcc ttgggatgta
     2521 ttggattttg acgttttgga cgctttggcg gagattccgc gcgagctttt tgtcgatgag
     2581 gacttgcagg gtttggcgta tgcggatatg gagctgccgc ttgccaacgg tcataagatg
     2641 ctcgagccga aagtcgtggc gcggctggcg cagggcttga agctgacgaa aaacgatacg
     2701 gttttggaaa tcggcacggg ttcgggctat gcgaccgcgc tgttggcaaa attggctggt
     2761 cgtgtggtgt cggacgacat cgatgccgaa cagcaaaacc gcgccaaagc ggtgttggac
     2821 ggcttgggtt tggacaatat cgattatgtg caaaacaacg ggttgaccga actttccgca
     2881 ggtgcgccgt ttgatgcggt ttacgtcggc ggtgcggtca atattgtgcc tgatgtgttg
     2941 aaacaacagt tgaaagatgg cggacgcatg gtggttatcg taggccgcaa gcctgttcag
     3001 cgcgcgcttt tgattacgcg caagggcgat gtgtttgaag agaaggtgct gttcgatacc
     3061 ttggtggcgc atttggacga taaggatacc gatccgtttg gcggtttcga tttttaagat
     3121 gttgacaggt catgccgtct gaaagcgggt ttggggcttc agacggcatt ttgcttggtt
     3181 ttttgggatt tttgcgatgg atattgtgca acttgggccg gcggaattga aggcgtggat
     3241 ggacgaaggg cggatgtttt gtttgttgga cgtgcgtacg gatgaagaaa cggcggtttg
     3301 ttcgctgcca aatgcgctgc atatcccgat gaatctgatt ccgctgcggc agaacgagct
     3361 gccggatgat gtgccgcttg tggtgtattg ccaccacggt atccgcagcc tgcatacggc
     3421 gatgtatttg gcggacgcgg gttttgaaaa cctgtacaac cttcagggcg gtatcgatgc
     3481 atgggcggcc gagattgacg gcaacatgat gcgttattga ggcaggcatt tcagacggca
     3541 ttccttaaat gcgtgtacct gtggtgttcc aaaaggtcgt ctgaaagtgc agcttctgcg
     3601 aagctaaagc gcagtatcaa cgaagttaaa atttgcctga accttaaagg cagcctgcac
     3661 cccaatcccc tctcccgtgg gagagggcta ggacgaggct ggcaaactga aagtttgctt
     3721 gggcggcatt ttcaatgtgc aggc
//
LOCUS       DAWKJW010000172         3704 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.172, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000172 DAWKJW010000000
VERSION     DAWKJW010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3704)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3704)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3704
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.172"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..173
                     /locus_tag="WJJ54_001744"
     CDS             <1..173
                     /locus_tag="WJJ54_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342575.1"
                     /translation="IAAKIDQAEISDSEKSWLKKELGKIKDTALSTLTENAINAIPAA
                     TLITLLKKFVGL"
     gene            complement(170..676)
                     /locus_tag="WJJ54_001745"
     CDS             complement(170..676)
                     /locus_tag="WJJ54_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HEZ7342576.1"
                     /translation="MAHPQEIREKLRRLYVSGEQTLETAALMCEIPQTTARAWKRADK
                     EKGDDWDKMRASYTLADGGIEDLSRAMLAGFMVQYNSTMTMLQDSSTEDLPPSDRAKL
                     LASLADAFTKTVSANARVMPETSKLATALELIEFLMAFVQEKHPKHLPAFVEVLEPFG
                     VEVEKKFG"
     gene            complement(679..876)
                     /locus_tag="WJJ54_001746"
     CDS             complement(679..876)
                     /locus_tag="WJJ54_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342577.1"
                     /translation="MSDPILEALARIENKTDQTLKNQKEMQAEIAQIRQDTKRTAITF
                     GALGGGVITVGWELLKAKMGL"
     gene            complement(873..1139)
                     /locus_tag="WJJ54_001747"
     CDS             complement(873..1139)
                     /locus_tag="WJJ54_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342578.1"
                     /translation="MDFEFGFRTLWPIATAAFWFWVNGISGRLKEADKRIDDLKEELH
                     AVKLSYHTKQDAQADRKNIAASLERIENKLEKVNEKLDRKADKS"
     gene            complement(1151..1489)
                     /locus_tag="WJJ54_001748"
     CDS             complement(1151..1489)
                     /locus_tag="WJJ54_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342579.1"
                     /translation="MTYRELVERQLAVRHADLELGLSRAREQEPFVIHVSDLLDKAGI
                     EYAVRMDKDFQTTFHLEYPITNYDTFKRAVWQTLGAYYCVCNDGDGLEIASNRPDGYA
                     VRIVFGDVPV"
     gene            complement(1486..1704)
                     /locus_tag="WJJ54_001749"
     CDS             complement(1486..1704)
                     /locus_tag="WJJ54_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342580.1"
                     /translation="MNEYTFSYRFNGKSWSLSIWADNPEEARAKFRAARENAHYDGEV
                     VAKVYTFVNISWVKKLYKRTKYLMGIKE"
     gene            1717..1887
                     /locus_tag="WJJ54_001750"
     CDS             1717..1887
                     /locus_tag="WJJ54_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HEZ7342581.1"
                     /translation="MYFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLL
                     KSTTAATPVKEV"
     gene            complement(1932..2237)
                     /locus_tag="WJJ54_001751"
     CDS             complement(1932..2237)
                     /locus_tag="WJJ54_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342582.1"
                     /translation="MSLLKTVKMQAAVVLTALAITACSSTTAPSATEIKVVEKAVLPT
                     PPAALMVAPVRPNPPKDGKTATLLEHAAEFGGYVAELENQNQAWRDWAGNHSRKVGN"
     gene            complement(2134..2553)
                     /locus_tag="WJJ54_001752"
     CDS             complement(2134..2553)
                     /locus_tag="WJJ54_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342583.1"
                     /translation="MNLVKLLANNWQPIAIIALVGTLLAVSHHQGYKSAFAKQQAVID
                     KMEKDKAQALLLSAQNYARELEQARAEAKKYEVKAHAVGMALAKKQAEVSRLKTENKK
                     EIENVLTQDRKNAGGGCIDGFGHHGLQLYNRALGYGN"
     gene            complement(2525..2761)
                     /locus_tag="WJJ54_001753"
     CDS             complement(2525..2761)
                     /locus_tag="WJJ54_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342584.1"
                     /translation="MRILDIFKNPATGNVSHSKLWANVACAAGTVKFVMLPDPSAEIW
                     AVYLGIVGGYAVARSLVSVKRQEVENESRETAGE"
     gene            complement(2764..2928)
                     /locus_tag="WJJ54_001754"
     CDS             complement(2764..2928)
                     /locus_tag="WJJ54_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342585.1"
                     /translation="MGQVAFYEKMIGLWSAKSREASEQADLAAFEFAEGELANYQEML
                     KRHLQTKSVE"
     gene            complement(2931..3137)
                     /locus_tag="WJJ54_001755"
     CDS             complement(2931..3137)
                     /locus_tag="WJJ54_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342586.1"
                     /translation="MNIIGKLKEAASYFLTKLIGENPSNEQVNRALIQMPNVRPIHTY
                     PRPNLRNSGVAAAKRAARKRKNRR"
     gene            complement(3134..3679)
                     /locus_tag="WJJ54_001756"
     CDS             complement(3134..3679)
                     /locus_tag="WJJ54_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ7342587.1"
                     /translation="MGKTVTLTAGHSNTDPGAVNGSDREADLAQDMRNIVASILRNNY
                     GLTVKTDGTGKGNMPLREAVKLIRGSDVAIEFHTNAAVSKAATGIEALSTVKNKRWCQ
                     VLSKAVAKKTGWKLRGEDGFKPDNAGQHLRLAYAQAGGIVFEPFFISNDTDLALFKTT
                     KWGICRAIADAIAMELGAARV"
BASE COUNT          843 a         1058 c          836 g          967 t
ORIGIN      
        1 taattgcggc aaaaatagac caagcggaga tttctgattc agaaaaaagc tggctgaaaa
       61 aagaattagg gaaaatcaag gacactgcat taagtacgct tacggaaaat gcaattaatg
      121 ctatccctgc cgccaccctc attactcttt taaaaaaatt tgtcggcctc taaccaaact
      181 tcttctccac ttccacccca aacggctcca atacctccac aaaggcaggc aaatgtttgg
      241 ggtgtttttc ttgcacaaac gccatcaaga actcaatcaa ttccaaagcc gtcgccagtt
      301 ttgacgtttc cggcatcaca cgcgcattgg ccgatacggt tttcgtaaac gcatcggcca
      361 ggctggccaa cagcttggcg cggtcggacg ggggcaaatc ttcggtactc gaatcctgca
      421 gcatcgtcat cgtgctgttg tactgcacca taaaaccggc caacatcgca cggctcaagt
      481 cttcaatacc gccgtcggcc aaagtgtagg aggcgcgcat cttatcccag tcgtcgcctt
      541 tttccttatc cgcacgtttc cacgcacgcg cagtggtctg cgggatttcg cacatcaagg
      601 ccgccgtttc caaagtttgc tcgccgctca catagagccg gcgtaacttt tcacggattt
      661 cttgcgggtg agccataatt acagtcccat tttcgcttta agcaattccc agccgaccgt
      721 aatcacgccg ccgcccagtg cgccgaatgt aatggccgtg cgtttcgtgt cttggcggat
      781 ttgcgcaatt tccgcctgca tttctttctg atttttcagc gtttgatcag tcttgttttc
      841 aatacgcgcc aaggcttcta aaatcgggtc gctcatgatt tgtctgcttt cctgtccagt
      901 ttttcgttta ctttttccaa cttgttttcg atgcgctcca aagacgctgc gatatttttg
      961 cggtcggctt gggcatcctg cttggtgtgg tacgagagct tgaccgcatg cagctcctct
     1021 ttcaggtcgt cgatacgctt gtccgcttct ttcagacggc ctgaaatgcc gttgacccaa
     1081 aaccaaaatg ccgccgtcgc aatcggccac agggttctga aaccaaattc aaagtccatt
     1141 taaaacccct ttaaaccggc acatcgccga atacgatacg gacggcgtaa ccgtcagggc
     1201 gattgctggc aatctccagt ccatcaccat cattacaaac acagtaatac gcccccaaag
     1261 tttgccaaac cgcacgttta aaggtgtcat agttcgtaat tggatattca aggtgaaacg
     1321 tcgtctgaaa atccttatcc atgcgtaccg cgtactcaat gcctgcctta tccaacagat
     1381 cggaaacatg aatgacaaac ggctcttgct cgcgtgcgcg gcttaagccc aattccaaat
     1441 cggcatggcg cacagccaac tgacgttcaa ctaattcacg gtaggtcatt ctttgatacc
     1501 cattaaatat tttgtccgct tgtacaattt cttaacccac gaaatattta caaatgtata
     1561 aacctttgct acaacttcgc cgtcatagtg cgcattttct cgtgcagccc gaaatttcgc
     1621 cctggcttct tcagggttgt ccgcccaaat gctcaatgac caggacttgc cgttaaagcg
     1681 gtaagaaaac gtgtactcat tcataggaga aaccttatgt attttgaaat ctataaagac
     1741 gcaaaaggcg aataccgttg gcgtttgaaa gcagccaacc atgaaatcat cgctcagggc
     1801 gaaggctaca ccagcaagca aaactgtcag cacgcagtcg atttgctgaa aagcactacc
     1861 gccgctaccc ctgtaaaaga ggtataaaat ccgctttcac cctcagcccg cgccctacgc
     1921 gggctttttt gtcagtttcc gactttgcgg gagtgattgc ccgcccagtc gcgccaagcc
     1981 tgattttgat tttccagttc ggcaacatag ccgccaaact cggcggcgtg ttccaacagc
     2041 gtggccgtct tgccgtcttt cggcggattc gggcgcaccg gcgcgaccat caacgcggca
     2101 ggcggtgtcg gcaagaccgc cttttcgaca accttaattt ccgtagccga gggcgcggtt
     2161 gtagagctgc aggccgtgat ggccaaagcc gtcaatacaa ccgccgcctg catttttacg
     2221 gtcttgagta aggacatttt cgatttcctt tttattttcc gttttcagac ggctgacttc
     2281 cgcctgtttt ttcgccaaag ccatgccgac agcgtgcgcc ttgacttcat attttttagc
     2341 ttccgcacgc gcctgttcca gctcgcgtgc atagttttga gccgacaaca gcagggcttg
     2401 cgctttgtct ttttccatct tgtcaatgac cgcctgctgc ttcgcaaaag ccgacttgta
     2461 gccttgatgg tgcgacaccg ccaagagcgt gccgacaagc gcgatgatgg caatcggttg
     2521 ccagttattc gccagcagtt tcacgagatt cattctcgac ctcctgacgt ttgacgctga
     2581 ccaacgaacg cgccaccgca tagccgccga caatgcccaa atacaccgcc caaatctccg
     2641 ccgacgggtc gggcagcatc acaaacttaa ccgtccccgc cgcgcaggca acgtttgccc
     2701 acagtttcga gtgcgacaca ttgcctgtcg ctgggttttt aaaaatatcc aaaatacgca
     2761 ttgctattcc acacttttgg tttgcaggtg ccgtttcagc atttcctgat aattggccag
     2821 ttcgccctcc gcaaattcaa acgccgccaa gtctgcctgt tcgcttgcct cacggctttt
     2881 ggccgaccac agcccaatca tcttttcgta aaacgcaacc tgtcccatga ttaacgacga
     2941 ttcttgcgtt tgcgcgccgc gcgtttcgcg gctgccacgc ctgagtttct taaatttggg
     3001 cgtggatagg tgtgtatcgg acgaacattt ggcatctgta taagtgcgcg gtttacctgc
     3061 tcattactag gattttctcc aatcaatttt gtaagaaaat aggaagcagc ttctttcaat
     3121 ttaccaataa tattcatact cttgccgccc ccaattccat cgcaatcgcg tccgcaatcg
     3181 cgcggcagat gccccattta gtcgtcttaa acaaggccaa atcagtgtcg ttgctgatga
     3241 aaaaaggctc aaacacaatg ccgccggctt gtgcataagc caggcgcaaa tgctggcccg
     3301 cattgtcggg tttaaagccg tcttcgccgc gcagtttcca gccggttttc ttggcaacgg
     3361 ctttgctcaa cacctgacac cagcgtttgt ttttaacggt actcaaggct tcgatgcctg
     3421 tcgccgcttt gctgacggca gcgttggtgt gaaactcaat cgccacatcc gagccgcgaa
     3481 tcagcttgac cgcttcgcgc agcggcatat tgcctttgcc cgtgccgtcg gttttaacgg
     3541 tcaggccgta attgttacgc aggattgaag ccacaatgtt gcgcatatcc tgcgccaagt
     3601 ccgcctcacg gtcgctgccg ttgaccgcac ccgggtcggt gttgctgtgt ccagcggtta
     3661 aggttacggt tttgcccatt catcatctcc aaaaaatatt gatt
//
LOCUS       DAWKJW010000173         3677 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.173, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000173 DAWKJW010000000
VERSION     DAWKJW010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3677
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.173"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(141..296)
                     /gene="rpmG"
                     /locus_tag="WJJ54_001757"
     CDS             complement(141..296)
                     /gene="rpmG"
                     /locus_tag="WJJ54_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009766925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEZ7342588.1"
                     /translation="MRDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVV
                     YKETKLK"
     gene            complement(328..561)
                     /gene="rpmB"
                     /locus_tag="WJJ54_001758"
     CDS             complement(328..561)
                     /gene="rpmB"
                     /locus_tag="WJJ54_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007586227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEZ7342589.1"
                     /translation="MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESEN
                     RWVRLRVSNAALRTIDKVGIDVVLADLRARGEA"
     gene            complement(811..2337)
                     /gene="farB"
                     /locus_tag="WJJ54_001759"
     CDS             complement(811..2337)
                     /gene="farB"
                     /locus_tag="WJJ54_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     permease subunit FarB"
                     /protein_id="HEZ7342590.1"
                     /translation="MDYPPLKGAALAWVTLSLGLAVFMEVLDTTIANVAVPVIAGNLG
                     AATTQGTWVITSFAVANAVSVPLTGFLAKRIGEVKLFTAAAVGFVITSWLCGIAPNLQ
                     ALVFFRILQGFIAGPLIPLSQSLLMASYPPAKRTLALALWAMTVVVAPVLGPILGGWI
                     SGNWHWGWIFFINIPIGIISAWITWKHLKYRETETVKMPTDYVGLTLMVVGIGALQMM
                     LDRGKELDWFASGEIITLGVVALVCLSYFIVWELGEKYPIVDLSLFKDRNFTVGVIAT
                     SLGFMVYMGTLTLLPLVLQTNLGYTSTWAGLAAAPVGILPVFLSPLIGRFGNKIDMRL
                     LVTASFLTFAFTFYWRTDFYADMDIGNVIWPQFWQGAGVAMFFLPLTTITLSHMKGGQ
                     IAAAGSLSNFLRVLMGGVGVSVVSTLWERREALHHTRFAEHITPYSATLHETAAHLSQ
                     HGVSDIQTAGIINNTITQQGFIIGSNEIFMAGSLLFIIMIPVIWLAKPPFHNGGGGGH
                     "
     gene            complement(2361..3515)
                     /gene="farA"
                     /locus_tag="WJJ54_001760"
     CDS             complement(2361..3515)
                     /gene="farA"
                     /locus_tag="WJJ54_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     adaptor subunit FarA"
                     /protein_id="HEZ7342591.1"
                     /translation="MDTHTDETKLQNTQAKRKRRLTALTLLFALAAVAAGSAFFLWWQ
                     HEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAK
                     NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHA
                     RAAVSQAQAAVKAALAEESSARAALGGDVSLREQPAVQTAIGRLKDAWLNLQRTQIRA
                     PADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPAELVSDL
                     YGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVLNREDVDRHPLR
                     IGLSMTVKVDTSAAGAPVSKTPGAALPEMESTDWSEVDRTVDEILGQSAP"
BASE COUNT          906 a         1032 c          915 g          824 t
ORIGIN      
        1 agcaccttag agaatcgttc tctatccttg gcagacggtt tgcagcagat tcgcatacgg
       61 cagatgtttc aagcggaaaa gaaacacgat aaaaataaaa aagcctccga acagtcggag
      121 gctttgcttt caaactgaaa ttatttcagt ttggtttctt tgtacactac gtgtttgcgg
      181 gcaaccggat cgaatttttt aatttccagt ttgccgggca tagtgcgttt gtttttggta
      241 gtggtgtaga agtgaccagt acctgcactg gattccagtt tgattttatc gcgcattgca
      301 gtaatcctta attaaatagt gtttaaatta agcttcgccg cgagcacgca aatcagccaa
      361 tacgacatca atgcctactt tgtcgatggt acgcagtgca gcgttggaaa cgcgcaggcg
      421 aacccagcgg ttttcacttt ctacccaaaa acgacgtgat tgcaagttgg gcaaaaaacg
      481 gcgtttggtt ttgttgttgg cgtgcgatac gttgttgccg gacatcgggc gtttgccggt
      541 cactttgcaa actcgtgcca taatcagtct ccaaacttct aaaatagtaa aacgcgattt
      601 ataccacgaa aaacagtgtt agttcaagtg ttttaaagaa aaacggctgt tttgcgcgga
      661 taatccttcc gattgtcgca tctgcggaac gtttgcaggt gcgaaacaga tggggcgcga
      721 ttatagcgga tttcgggaac tgctgcattc aaaatgccgt ccgaacatat ttccagtatt
      781 ttcagacggc atttcaagtt ttcaaatccc tcaatgtcca ccgccgccgc cgttgtggaa
      841 cggcggtttt gccagccata tgacaggaat catgatgatg aacagcaggc tgcccgccat
      901 aaagatttcg ttcgagccga taataaaacc ctgctgggta atggtattgt tgataatacc
      961 tgcggtttga atgtcggaaa cgccgtgctg ggacaaatgc gccgccgttt cgtgcaatgt
     1021 cgcggaatat ggcgtgatgt gttcggcaaa gcgtgtatgg tgcaacgctt cgcgccgttc
     1081 ccacagggtg ctgacgacgg atacgccgac accgcccatc agcacgcgca agaaattcga
     1141 caggctgcct gcggcggcaa tctgtccgcc cttcatgtgc gacagtgtga tggtggtcag
     1201 cggcaggaag aacatggcaa cgcctgcccc ctgccaaaac tgcggccaga tgacgttgcc
     1261 gatatccatg tcggcataaa aatcggtgcg ccaatagaaa gtaaaggcaa aggtcaggaa
     1321 gctggcggtt acgagcaggc gcatatcgat tttattgccg aacctgccga ttaacggaga
     1381 caggaagacg ggcaggatgc cgacgggtgc ggcggcaagc cccgcccacg tggaggtata
     1441 gcccaggttg gtctgcaaca ctaacggcag caaggtcagc gtccccatat acaccataaa
     1501 acccaatgat gtggcaatta cgccgacggt aaaattccga tctttaaaca gcgataaatc
     1561 gacaatcgga tatttttctc ccaattccca aacaataaaa tacgacaaac acaccagtgc
     1621 gactacgccc aaggtaatga tttctccaga ggcgaaccag tcgagttcct tacccctgtc
     1681 cagcatcatc tgtaacgcgc cgataccgac taccatcaat gtaagcccga catagtcggt
     1741 cggcatttta acggtttccg tttcccgata tttcaaatgt ttccatgtaa tccatgccga
     1801 tatgataccg atagggatat taatgaagaa aatccaaccc caatgccagt ttccggaaat
     1861 ccagccgccg agtatcggcc cgagaacagg ggcgacaacg acggtcattg cccacaatgc
     1921 cagtgccagc gtccgttttg cgggcggata ggatgccatt aacaggcttt gcgacagggg
     1981 aatcagcggc ccggcgataa aaccctgcaa gatgcggaaa aacaccaaag cctgaaggtt
     2041 gggcgcgatg ccgcacagcc atgatgtgat gacgaaaccg acagcggcgg cggtaaacaa
     2101 tttgacctcg ccgatacgtt ttgccaaaaa gcccgttaac ggcacggaaa cggcgtttgc
     2161 cacagcaaaa gaagtaatga cccacgtccc ctgcgtggtt gccgcaccga ggttgccggc
     2221 gatgacggga acggcgacat tggcgatagt cgtatctaaa acttccataa atacggcaag
     2281 ccccaaagac agcgtaaccc acgccaatgc cgcaccctta agcggtggat aatccattgt
     2341 gtcctccgtt tcagacggca tcagggcgcg gattgcccga ggatttcatc gaccgtccga
     2401 tcgacttccg accagtcggt actttccatt tccggcaatg ccgcacccgg cgtttttgaa
     2461 acaggcgcgc ctgcggcgga agtatccact ttaaccgtca tcgacaaacc gatacgcaac
     2521 ggatgcctgt ccacatcttc gcggttcagc acgatacgga cggggacgcg ctgcaccact
     2581 ttaatccagt tgcccgttgc gttttgcgcc ggaatcagcg aaaacgcgct gcccgtacct
     2641 gccgaaaacc ctgccaccct gccgcgataa acaatttgtt tgccgtacaa atcggacacc
     2701 agttcggcag gctgtccgat tttcatatgc cgcaactgcg tctctttaaa attggcatcc
     2761 acccacacat ccgacagcgg caccaccgcc atcagcggcg cgcctgccgc cacctgctgc
     2821 ccgacctgca ccgaacgctt cgccacctga ccgtccgccg gcgcgcggat ttgcgtccgc
     2881 tgaaggttca accacgcatc tttcaacctg ccgattgccg tctgaaccgc cggctgttcg
     2941 cgcaaagaaa catctccgcc caaagccgcg cgtgccgaag actcttccgc caaagccgct
     3001 ttgaccgccg cctgcgcctg agacactgcc gcacgggcgt gtgccagctc ttcggcggac
     3061 accgcgcccg attccgccaa agcagaccgg cggcgcaaat catcctgtgc gcgtgccaaa
     3121 tccgcccggc gcaaggcaac ctgcgccccc gcctgcgaag tggcggcatt ttgccggcgg
     3181 ttttgccgca ccgcctgaac cagctcgttt tttgcccgct cgtaagccag cacatcatta
     3241 tcgtcgtcca ataccgccag cacgtcgcct tttttcacgg catccgtatc gtcgtgcaaa
     3301 accttccgca ccgtaccgcc cttttgcggc gtaacctgaa ccacgcgtcc ggcaacataa
     3361 gcgtcttccg tttcctcttc gtgctgccac cataaaaaaa acgccgaccc ggcggctacg
     3421 gcggcaagcg cgaacagcag cgtcaatgcc gtcaggcggc gtttgcgttt ggcttgcgtg
     3481 ttttgaagtt ttgtttcgtc cgtgtgcgta tccataagat tgggttccga atttcctgat
     3541 ttcatataaa caatgttctt tcaataggaa gcagattcta tatccgcgca ataacgcaat
     3601 caagtcagta ttttagatgc aatattcaaa aaacaacgct tcaggcggca aaactgaaaa
     3661 tatatttcgt ttatata
//
LOCUS       DAWKJW010000174         3656 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.174, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000174 DAWKJW010000000
VERSION     DAWKJW010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3656
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.174"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..187)
                     /locus_tag="WJJ54_001761"
     CDS             complement(<1..187)
                     /locus_tag="WJJ54_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HEZ7342592.1"
                     /translation="MISACPGFIHSRLGRSVMPSEPAGRLFQKTPYRCNFMRLYGVGF
                     ALQTAYASRSSLVFQSVH"
     gene            135..494
                     /locus_tag="WJJ54_001762"
     CDS             135..494
                     /locus_tag="WJJ54_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342593.1"
                     /translation="MTDRPSLLWIKPGQAEIMEYCEPEEASDPYATYRRANLMAGLPL
                     FVVILVLLNIVFPLPAYPLAWLVPAGFMVLGGGFPLSLPLVALLVLTCCILAHCPPLS
                     RLLCYPCPNHPMSKNSA"
     gene            525..3377
                     /gene="gcvP"
                     /locus_tag="WJJ54_001763"
     CDS             525..3377
                     /gene="gcvP"
                     /locus_tag="WJJ54_001763"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HEZ7342594.1"
                     /translation="MKLSELFNPNEFAARHLSFGDEAALLAAVGEKSMDDFVGNTVPQ
                     SIRMPSELDLPEALTEADALAKLKGIASKNMINKSYIGLGYYPTRVPNVILRNVLENP
                     GWYTAYTPYQAEIAQGRLEALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRV
                     GKVKSERFFVDARVYPQTLDVMKTRAKYFGFELVVGDFAQADEGEYFGALFQYVGKDG
                     DVQDLQDVIGRLKAKGTIVAVSADIMSLVLLKSPAELGADIALGNTQRFGVPMGFGGP
                     HAAYFAFKDEFKRSAPGRIIGVSKDASGKPALRMALSTREQHIRREKATSNICTAQAL
                     LANLAGMYAVYHGPEGVKRIANRIHALASAFADALVSDGLNVVHKVFFDTVTVDFGNK
                     EKADQVFAAALESGYNLRRVNDTQVAAAFHETSACEDLVDLYRAFTGKDAFAFADDVK
                     GRLNAELLRQDDILQHPVFNRYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNA
                     TAEMLPITWAEFSDIHPYAPETQTAGYRELLTDMENSLKAITGFDAISLQPNSGAQGE
                     YTGMLSIRRYQEANGEGHRNICLIPKSAHGTNPATAAMLGLKVVVVDTDEHGNVNIDD
                     LKAKAEQHRDTLSAIMITYPSTHGVYEEGIRDICRIIHENGGQVYMDGANLNAQIGIM
                     QPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHLAPFAPGHALTDTHSASADQT
                     AVAAAAFGSASILPITWMYLTMMGKQGMEQATRWALLNANYVAKRLSEDYPILYTGKN
                     GRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKA
                     ELDRFIAALKQIKQEVLKVGRGEWPKDDNPLVNAPHTAADITGDWARPYSREEAVFPL
                     PFVREHKFWPFVNRVDDVYGDRNLVCSCPPMENYED"
BASE COUNT          864 a         1053 c          940 g          799 t
ORIGIN      
        1 catgaaccga ctggaacacc aaactgcttc gggacgcata tgccgtctga agtgcaaaac
       61 ctacgccata cagccgcatg aagttgcagc ggtatggcgt tttttgaaaa agacggcctg
      121 ccggttcaga cggcatgacc gaccgtccga gcctgctgtg gataaagccc ggacaggctg
      181 aaatcatgga atattgcgaa cctgaagaag catccgaccc gtacgcaaca tacaggcgtg
      241 ccaacctgat ggcgggtctg ccgctgtttg tcgtgatttt ggttctgctc aatattgttt
      301 ttccgcttcc ggcgtatcca ttggcttggc tggtgcctgc aggtttcatg gttttgggcg
      361 gcggctttcc cttatcgctg ccgcttgtgg cgctgcttgt cctgacctgc tgcattctgg
      421 cgcattgtcc gccattatcc cgtcttttgt gctacccttg cccgaatcat ccgatgtcta
      481 aaaattctgc ctgatggcag ccctacaaac ccgaaggagt agaaatgaaa ctgtccgaac
      541 tgttcaaccc caacgaattt gccgcgcggc atttgagttt cggcgacgaa gcggcgttgc
      601 ttgccgctgt cggcgagaaa agtatggacg attttgtcgg caacaccgtg ccgcaaagca
      661 tccgtatgcc gtccgaactc gatttgcccg aagccctgac cgaagcggac gcattggcga
      721 aattgaaagg cattgcgtcg aaaaacatga tcaacaaatc ctatatcggt ttaggctatt
      781 acccgacccg cgtgccgaac gtgattttgc gtaacgtatt ggaaaatccg ggttggtaca
      841 ccgcctacac gccgtatcag gcggaaatcg cccaggggcg tttggaagcg ttgttgaact
      901 tccaacaagt gtgtatcgat ttgaccggct tccccgtggc aggcgcgtct ttgctggacg
      961 aagcgactgc cgccgccgaa gcgatggcga tggcgcaccg cgtgggcaaa gtgaaatccg
     1021 agcgtttctt cgtggatgcg cgcgtgtatc cgcaaacttt ggacgtgatg aaaacccgcg
     1081 ccaaatattt cggctttgaa ttggtggtcg gcgattttgc tcaagccgac gagggcgaat
     1141 acttcggcgc gctgttccaa tacgtcggca aagacggcga tgtgcaagac ttgcaggacg
     1201 ttatcggccg tctgaaagca aaaggcacaa tcgttgccgt ttccgccgac attatgagct
     1261 tggttttgct gaagtctccg gctgaattgg gtgcagatat tgctttgggc aacacgcaac
     1321 gcttcggcgt gccgatgggc ttcggcggtc cgcatgctgc ttatttcgcg tttaaagacg
     1381 agttcaaacg ttccgccccg ggccgtatca tcggtgtatc caaagacgca tcgggcaaac
     1441 ctgccttgcg tatggcgttg tccacccgcg agcaacacat ccgccgcgaa aaagccacgt
     1501 ccaatatttg taccgcgcag gcattgctgg cgaatttggc cggtatgtat gccgtttacc
     1561 acggccctga aggcgtgaaa cgcatcgcca accgcattca cgcgctggct tctgcctttg
     1621 ccgatgcact ggtttcagac ggcctgaatg tggttcataa ggtcttcttc gataccgtta
     1681 ccgtcgattt cggcaacaaa gagaaagcag accaagtgtt tgccgctgct ttggaatcgg
     1741 gctataacct gcgccgcgtt aacgatactc aagttgcggc tgcattccac gaaacatcgg
     1801 catgcgaaga tttggttgat ttgtaccgcg cgtttaccgg caaggatgcg ttcgcatttg
     1861 ccgatgatgt caaaggccgt ctgaacgccg aattgctgcg tcaagatgac attctgcaac
     1921 atcctgtgtt caaccgttac cacaccgaac acgaaatgtt gcgctatctg aaaaaactcg
     1981 aagaccgcga tttggcgatg aaccgcagta tgatttcatt gggcagctgt actatgaaac
     2041 tcaacgcgac tgcggaaatg ttgccgatta cttgggcgga gttctccgac atccacccct
     2101 acgcccccga aacccaaacc gcaggctacc gcgaactctt aacagacatg gaaaacagcc
     2161 tgaaagccat caccggcttt gacgcgattt ccttgcaacc caactccggc gcacaaggtg
     2221 aatacaccgg tatgctctcc atccgccgtt atcaagaagc caacggcgag ggacaccgca
     2281 acatctgttt gattcccaaa tccgcccacg gtaccaaccc tgcgactgcg gccatgctgg
     2341 gcttgaaagt cgtcgttgtc gataccgacg aacacggcaa cgtcaacatc gacgatttga
     2401 aagccaaagc cgagcaacac cgcgacactt tgtccgccat catgattacc tatccgtcta
     2461 cccacggcgt gtacgaagaa ggcatccgcg acatctgccg catcatccat gaaaacggcg
     2521 gacaggttta catggacggc gccaacctca acgcccaaat cggcatcatg cagcctgccg
     2581 aagtcggcgc ggacgtgttg cacatgaacc tgcacaaaac cttctgtatc cctcacggcg
     2641 gcggcggtcc gggcatgggt ccgattggct tgaaagccca tctggctccg ttcgcaccgg
     2701 gacacgcttt gaccgacacc cacagcgcca gtgccgacca aaccgccgtt gctgctgcgg
     2761 ccttcggttc tgcgtccata ctgccgatta cttggatgta tctgaccatg atgggcaaac
     2821 aaggcatgga acaggcgaca cgctgggcat tgctcaacgc caactacgtt gccaaacgcc
     2881 tgagcgaaga ctatccgatt ctgtatacag gcaaaaacgg ccgcgtcgcg cacgaatgta
     2941 tcgtcgattt gcgtccgctc aaagccgaaa gcggcattac cgaaaccgac atcgccaaac
     3001 gcctgatgga ctacggcttc cacgccccga cggtttcctt ccccgttgcc ggtacgctga
     3061 tgatcgagcc gaccgagagc gaaagcaaag ccgaactcga ccgcttcatc gccgccctga
     3121 aacaaatcaa acaggaagtg ctgaaagtcg ggcgcggcga atggccgaaa gacgacaacc
     3181 cactggtcaa cgcgccgcac accgccgcag atataaccgg cgactgggcg cgcccgtatt
     3241 cccgcgaaga agccgtcttc ccgctgccct tcgtgcgcga acacaagttt tggcccttcg
     3301 tcaaccgcgt ggacgacgtg tacggcgacc gcaatctcgt gtgcagctgc ccaccgatgg
     3361 aaaattatga agactgaccg ttgaaacccc gaagacaaat gccgtctgaa acactttcag
     3421 acggcatttt cgtcgacggc agactggttg caccgataca cgtatctcga ctataacttt
     3481 aaaacaaatg ggttaaacca gtatccatac atcagctttt ttatcatcct actttttatt
     3541 catccgatcg ggcagacaga tttcaaagat gaaaagccta ttcacaccct ttgatgtcat
     3601 ttccacacgg acaaacaaat atagtggatt aacaaaaacc agtacagcgt tgcctc
//
LOCUS       DAWKJW010000175         3554 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.175, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000175 DAWKJW010000000
VERSION     DAWKJW010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3554
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.175"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(475..1116)
                     /locus_tag="WJJ54_001764"
     CDS             complement(475..1116)
                     /locus_tag="WJJ54_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrxB family glutaredoxin"
                     /protein_id="HEZ7342595.1"
                     /translation="MKLYIYDHCPFCVRARMAAGLFGADVEEAVLANDDEATPIGMIG
                     AKQVPVLQKEDGSFMGESLDIVRHFDREGRLKDEVRPEIQAWLDKVDGYNNKLVQPRV
                     IKIGLPEFATAEAVKYFTDKKEKSIGSFSANLNKTAQYLERINADLQELENLMDGASD
                     GINGGIGMEDILVFPVLRNLTVVRGIEWPQKVMGYLMTMSEKSGVPLYFDRAL"
     gene            1259..3472
                     /locus_tag="WJJ54_001765"
     CDS             1259..3472
                     /locus_tag="WJJ54_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEZ7342596.1"
                     /translation="MTAISPIQDTQSATPQELREWFDSYCAALPDNDKKLVLAARSLA
                     QEHYPADAATPYGEPLSDHFLGAAQMVHELDLLPDAVAATLLADIGRYVPDWNLLVSE
                     RCNSTVAELVKGVDEVQKLTHFARVDSLATPEERAQQAETMRKMLLAMVTDIRVVLIK
                     LAMRTRTLQFLSNVPDNPEKRAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPE
                     KYREIALLLDEKRTERLEYIENFLNILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKK
                     LSFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTV
                     IVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWREN
                     MAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGA
                     KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSNKAIGKIRAYIRQQNAD
                     TVREEGRVQLDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGT
                     LNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGEDGLMTTLAKCCKPAPPDDIVGFVTR
                     DRGISVHRKTCPSFRHLAEHAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVS
                     DALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPRVLASLGDVKGVLSVTRL"
BASE COUNT          961 a         1064 c          782 g          747 t
ORIGIN      
        1 aaccttcatt aaacaaaaag aagaaatggc agataaatta catacgatat agtggaatat
       61 aaaatattta cggtctaaac cttgttcagt tgcaattttt ttatacttac cttgcgcaaa
      121 aaaatcaaag aaatccatta aactatcttt cacattagaa atttaaaagc taaataatac
      181 gacaaacaat gtgaagtact attcatggtt tatttaaaaa ataatactat tctgaacatt
      241 atttagatac agaaattaac aaattagaac taaacaagct tttaaatact ttaattttat
      301 tggaaagcta taaaaggaac tataacttta cacactagtc acttcttttt aagaggcaaa
      361 agggattggg aaggtcgtct tggagataag cactggtatt tcggccaatg gtaaatagag
      421 tttacctcaa atagggtaga acctccttca tctgtcagtt aataacagcc acttttacaa
      481 tgccctgtca aaataaagcg gcacgcccga tttttcactc atcgtcatca aataacccat
      541 caccttttgg ggccattcga tgccgcgcac cacggtcaga ttcctcaaaa cggggaaaac
      601 caaaatatcc tccataccga ttccgccgtt gatgccgtct gaagcaccgt ccatcaaatt
      661 ttccaactct tgcaaatctg cgtttatccg ttcgaggtat tgggcggttt tattcaaatt
      721 ggcggaaaag ctgccgatgc ttttctcttt tttgtccgtg aaatatttaa ccgcttcggc
      781 agtagcgaac tcgggcagcc cgattttgat tacgcgcggc tgcaccagtt tgttgttgta
      841 tccgtccacc ttgtccaacc acgcctgtat ctcggggcgg acttcgtctt tcagacggcc
      901 ttcgcggtcg aaatgccgca caatgtccaa actctcgccc ataaacgaac cgtcttcttt
      961 ttgcaggacg ggcacttgtt tcgcgccaat cataccgatc ggcgttgcct cgtcgtcgtt
     1021 tgccagcacg gcttcttcaa cgtccgcgcc aaacagcccg gcagccatcc gcgcacgaac
     1081 gcaaaacggg caatggtcgt aaatatacag tttcatcaaa atattcctcg tcaacctgtc
     1141 ggtaccggct accttaacac cccgcgccgc ccgaaacaag tttatcttcc cgcctatgca
     1201 ccgtaaataa ataagctgtt acaataaact cgtttttatc ggaacggaag acccaatcat
     1261 gaccgccatt agcccgattc aagacacgca aagcgcgacc ccgcaagaat tgcgcgaatg
     1321 gttcgacagc tactgcgccg cgctgccgga caacgataaa aaacttgtct tagccgcccg
     1381 ttcactggcg caggaacatt accccgccga tgccgccacg ccgtatggcg agccgttgtc
     1441 cgaccacttc ctcggtgcgg cgcaaatggt ccatgaactc gacctgctgc ccgatgccgt
     1501 cgccgccacc ctgcttgccg acatcggacg ctacgtcccc gactggaatc tcttggtttc
     1561 cgaacgctgc aacagcaccg tcgccgagct ggtcaaaggt gtggacgaag tgcagaaact
     1621 tacccacttc gcccgcgtgg acagcctcgc cacgccggaa gaacgcgccc agcaggccga
     1681 aactatgcgg aaaatgctgc tggcgatggt taccgacatc cgcgtcgtgt taatcaaact
     1741 ggcgatgcgt acgcgcaccc tgcaattttt aagcaacgtc cccgacaacc ccgaaaaacg
     1801 cgccgtcgcc aaagaaaccc tcgacatctt cgccccgctc gccaaccgct tgggcgtgtg
     1861 gcagctcaaa tggcagctcg aagacctcgg cttccgccat caagaacccg aaaaataccg
     1921 cgaaatcgcg ctgcttttgg acgaaaaacg taccgaacgc ctcgaataca tcgaaaactt
     1981 cctcaatatc ctgcgtacgg aactcaaaaa atacaatatc cactttgaag tcgccggccg
     2041 tccgaaacac atctactcca tttacaaaaa aatggtgaag aaaaaactca gcttcgacgg
     2101 tctgttcgac atccgcgccg tgcggattct ggttgatacc gtccccgagt gttacaccac
     2161 actgggtatc gtccacagtc tctggcagcc catccccggc gagttcgacg actatatcgc
     2221 caaccccaaa ggcaacggct ataaaagttt gcacaccgtc attgtcggcc cggaagacaa
     2281 aggcgtggaa gtacaaatcc gcaccttcga tatgcaccaa ttcaacgaat tcggtgtcgc
     2341 cgcccactgg cgttataaag agggcggcaa aggcgattca gcctacgaac aaaaaatcgc
     2401 ctggttgcgc caactcctgg actggcgtga aaacatggcg gaaagcggca aggaagacct
     2461 cgccgccgcc ttcaaaaccg agcttttcaa cgacacgatt tacgtcctga ccccgcacgg
     2521 caaagtcctc tccctgccca cgggcgcaac ccccatcgac ttcgcctacg ccttacacag
     2581 cagcatcggc gaccgttgcc gcggtgcgaa agtcgaaggg cagattgtgc cgctgtccac
     2641 cccgctcgaa aacggacagc gtgtcgaaat cattaccgcc aaagaagggc atccttccgt
     2701 caactggctt tacgaaggct gggtcaaatc caacaaggca atcggcaaaa tccgcgccta
     2761 catccgccag caaaacgccg acaccgtgcg cgaagaaggc cgcgtccaac tcgacaaaca
     2821 gcttgccaaa ctcacgccca aacccaacct gcaagagctt gccgaaaatc tcggctacaa
     2881 aaagccagaa gacctctaca ccgccgtcgg acaaggcgaa atttccaacc gcgccatcca
     2941 aaaagcctgc ggcacgctga acgaaccgcc gcccgtaccc gtcagcgaaa ccaccatcgt
     3001 caaacagtcc aaaatcaaaa aaggcggcaa aaacggcgtg ctcatcgacg gcgaagacgg
     3061 tctgatgacc acgcttgcca aatgctgcaa acccgcgccg cccgacgaca ttgtcggctt
     3121 cgttacccgc gatcgcggca tttcggtaca ccgcaaaacc tgcccctctt tccgacacct
     3181 cgccgaacac gcgcccgaaa aagtactgga cgcaagttgg gcggcgttgc aggaaggaca
     3241 agtgttcgcc gtcgatatcg aaatccgcgc ccaagaccgc tccgggcttt tgcgcgacgt
     3301 atccgacgcg ctcgcccgcc acaaactcaa cgttaccgcc gtgcaaaccc agtcccgcga
     3361 cttggaagcc agtatgcggt tcacgctcga agtcaaacag gtcaacgacc tcccgcgcgt
     3421 cctcgccagc ctcggcgacg tcaaaggcgt attgagcgtt acccggcttt aaatacaaaa
     3481 atgccgtctg aaagccgaat aacgcttcag acggcatttt gattgccggg gtttgctatt
     3541 ttttgttgca tagt
//
LOCUS       DAWKJW010000176         3534 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.176, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000176 DAWKJW010000000
VERSION     DAWKJW010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3534)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3534)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3534
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.176"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            1..576
                     /locus_tag="WJJ54_001766"
                     /pseudo
     CDS             1..576
                     /locus_tag="WJJ54_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234963.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
     gene            695..766
                     /locus_tag="WJJ54_001767"
                     /pseudo
     CDS             695..766
                     /locus_tag="WJJ54_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1241..1957)
                     /gene="trmB"
                     /locus_tag="WJJ54_001768"
     CDS             complement(1241..1957)
                     /gene="trmB"
                     /locus_tag="WJJ54_001768"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEZ7342597.1"
                     /translation="MTDTAENQTQNNWQAEHPRSIRSFVLRQSHMTAAQQRAIDTLWD
                     SFGIDYQATPADLDARFGSSRPKILEIGFGMGTATAEIARRLPETDFLAIDVHGPGVG
                     NLLKLINENHLENIRVMRHDAVEVVENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQA
                     PFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDSLQNTAADYAPTPDYRPETKF
                     EARGKRLGHGVWDLVFKRIG"
     gene            complement(2079..3482)
                     /locus_tag="WJJ54_001769"
     CDS             complement(2079..3482)
                     /locus_tag="WJJ54_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HEZ7342598.1"
                     /translation="MNNPDLPYRQALERLSQKQYNFTEVRRLLTEAASAGHPAAAFEL
                     AKHLMDADSPYQDREQGMEMLRIAAEQGHPYARYNLAYIQELEGARPETLIPLYRPLA
                     EEGLPEAQVRLMYLLYASRHFEEALKWAKTTAKNNNPHGQYLLAQYCQYGTPPDFETA
                     HLLYREAAAQGLAAAQWQLGLQYRFGQGTPTDTTQAINHLRAAAQQGYIPAYTPLAEL
                     ILPTAPDEAVYQFQQAAQENDPDAHAALADIYLQGKHPERNYKLALHHAEAAAAERHP
                     EGLRILGDICRYGLGIAPDTEKARHYYRQAAEAGSLTAYQKLISDSALNHPEQYGGIK
                     DSAIRRQRAEQLYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQTNLGSMYYFG
                     QGMTADYNEARKWFEKAAAQKDSMALYNLACIHYNGHGVEPDKEKACRYLQEAINNGY
                     GQKSFLQELLQQWQNAV"
BASE COUNT          765 a          752 c          981 g         1036 t
ORIGIN      
        1 tcttgaaata gatcccaaaa ctatatctga atctaatgta gctaattatg tactttttcc
       61 taatcctgag caaattacaa aagagttttg tagttcaaaa attgatgatg atttaatgct
      121 tgatgaggaa tttatcccta ttgagattat tggagaaaat gaacttatac catgtgggta
      181 tttggatttt gatatcgaat attggagtaa ttatttgttt tcagaaaaaa accaatagaa
      241 aatgaaattc ttttagtatg cgggttccct ttttcagata atgaaataga ttatactgat
      301 gatggtgaga ttaaaaaagt atcgcatcaa gtgcatatat atgctggtaa atgtaaaaaa
      361 gacgatatag gcttttttgt tgaaaaagaa gataaaaatg tttcatttga ttgtaatggt
      421 gttagtggtg gaattgtgat gagaatgata gatggacaca gtgagtgggt tggaattgct
      481 gttagggcaa ataatgacat cattcgtttt attccttatt atctcgtagc gaaatcaata
      541 atccagaata tcttaaatag aaatcaacaa gcgtaggtcg gatacttgta tccgacaaaa
      601 ccttcaacat tcccgtcgtt gcaatccatt gcagctatgt ccgaaatgtc ggattcgaaa
      661 atccgaccta caaaatcatt ccgagcataa cactatgaaa taacgtcgtt tttaccgcaa
      721 tgacggcact tactttttta cggttgcaac caataaacgg cagcaagcgt agggtgggca
      781 cttgttgccc acgcgtttat ctccgaaagg cagcaactgt aggtcggata cttgtatcca
      841 acaaaccttt aacattctcg ttgttgcaat ccattgcagc aatgcccaaa atgtcggatt
      901 cgagaatccg acctacaaaa tcattccgaa cataatacta tgaaataccg tcgttttacc
      961 gcaatggcgg cacttacttt tttacggttg taaccagcaa gccgtagcct acatcacacc
     1021 aaccgcgtgc gtagctatca catactacct gcgggcggca caaactttaa aaccgatgtg
     1081 caggttaaaa cctacaagga tgcgtgcggt acacacgcgt tttgctgttc gcaccattgc
     1141 tttgaacttt atatcgaaac atcactcgct gctttatctt gaaaaaatgc cgtctgtaag
     1201 caaacgtgct tcagacggca tttttttatc cggcggtctg ttatccgatc cgtttgaata
     1261 ccaagtccca aacgccgtgc ccgaggcgtt tgccgcgcgc ttcgaatttg gtttcggggc
     1321 ggtagtccgg ggtgggggcg tagtctgccg ccgtattttg caggctgtcg aagctactga
     1381 ggacttcaag catctgctgt gcatattctt cccagtctgt cgccaggtgg atatagccgc
     1441 cggttttgag tttgggcagc agtttggcga tgaagggggc ttgtatcaga cggcgtttgt
     1501 ggtggcgttt tttgtgccac gggtcgggga agaatatgtg gatgccgtcg agcgagccgt
     1561 cttgcagcat attttcgacg acttctacgg catcgtgccg catcacgcgg atgttttcca
     1621 aatggttttc gttgatgagt ttgagcaggt tgcctacgcc gggaccgtgt acgtcgatgg
     1681 cgaggaagtc ggtttcgggc aggcggcggg cgatttctgc ggttgccgtc cccataccga
     1741 agcctatttc gagaattttg gggcggctgc ttccgaaacg ggcatcgaga tcggccggtg
     1801 ttgcttggta gtcgatgccg aagctgtccc ataaggtatc gatggcgcgt tgctgcgcgg
     1861 cggtcatatg gctttggcgg aggacgaagc tgcggatgct gcggggatgt tcggcttgcc
     1921 agttgttttg tgtttggttt tcggcggtgt ctgtcataat gctttcgtgc gcttgtgcaa
     1981 tcaggatgcc gtctgaatgt gaaatgcctg ttcggacggc gggaagggaa aggggcgatt
     2041 atacctgttt cgtttttgcg gggtaaatgt accagtgttc agacggcatt ttgccactgt
     2101 tgcaacagtt cttgcagaaa gcttttttgc ccgtatccgt tgtttatggc ttcttgcagg
     2161 tagcggcagg ctttttcttt gtccggctcg acgccgtgtc cgttgtaatg gatgcaggcg
     2221 aggttataaa gtgccatgct gtctttttgc gcggcggctt tttcaaacca tttgcgtgct
     2281 tcattgtagt cggcggtcat accctgtccg aagtaataca tgctgcccag attggtttgg
     2341 gctttgctgt gtccgagttc tgcggcttct gtgtagagtt tgagcgccgc cgcgtattcg
     2401 ggcgcgcatt gtaatccgta atgcagggct tgggcttttt gataaagctg ttctgccctt
     2461 tgccgcctaa tggcggaatc tttgatgcca ccatattgct cgggatggtt taacgcactg
     2521 tcggatatga gtttctgata ggcggtaagg ctgccggctt cggctgcctg ccggtaataa
     2581 tgccgggctt tttccgtatc gggggctatg cccaaaccgt agcggcagat gtcgcccagt
     2641 atccgcaaac cttcgggatg gcgttcggcg gcggctgctt cggcgtgatg cagggcaagt
     2701 ttgtagtttc tttccggatg cttgccttgc aggtagatgt cggcaagtgc ggcatgggca
     2761 tcggggtcat tttcctgtgc cgcctgttga aactggtaaa cggcttcatc gggagccgta
     2821 ggtaggatga gctcggcaag cggggtgtag gcgggaatgt atccttgttg tgcggcggcg
     2881 cgcaaatgat tgatagcttg ggtcgtgtcg gttggtgtac cttgtccgaa acggtattga
     2941 aggccgagct gccattgtgc cgccgccaag ccttgtgctg cagcctcgcg gtagagaagg
     3001 tgtgccgttt caaaatccgg tggcgtaccg tactggcagt attgggcaag cagatattgt
     3061 ccgtgggggt tgttgttttt tgcggtcgtt tttgcccatt tcagggcttc ttcaaaatgt
     3121 cgggacgcat acagaaggta catcaggcgg acttgtgctt cgggcagtcc ttcctctgcc
     3181 aacggtctgt aaagcggtat cagggtttcc gggcgcgcgc cttctaattc ttggatatat
     3241 gccagattgt aacgcgcgta gggatgtccc tgttcggcgg cgatgcggag catttccata
     3301 ccttgttcgc ggtcttggta ggggctgtcc gcgtccatca ggtgttttgc caactcgaat
     3361 gcggcggcgg gatgacctgc cgaggccgct tctgtcagca gtcggcggac ttcggtaaag
     3421 ttatattgtt tttgagacag gcgttctaag gcctgccgat agggtaagtc gggattgttc
     3481 atatcagatc gttttccgtt ttgtcgaatc atcgttattg tgttatgaag ttag
//
LOCUS       DAWKJW010000177         3488 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.177, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000177 DAWKJW010000000
VERSION     DAWKJW010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3488
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.177"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(214..1278)
                     /locus_tag="WJJ54_001770"
     CDS             complement(214..1278)
                     /locus_tag="WJJ54_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEZ7342599.1"
                     /translation="MEKEFRILNIVSAKIWGGGEQYVYDVSKALGLRDCTMFTAVNKN
                     NELMHRRFSEVSSVFTTRLHTLNGLFSLYALTRFIRKNRISHLMIHTGKIAALSILLK
                     KLTGVRLIFVKHNVVANKTDFYHRLIQKNTDRFICVSRLVYDVQTADNPFKEKYRIVH
                     NGIDTDRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGD
                     GHPDYMCRLKRDVSASGAEPFVSFEGFTEKLASFYRQSDVVVLPSLVPEAFGLSLCEA
                     MYCRTAVISNTLGAQKEIIEHHQSGILLDRLTPESLADEIERLVLNPETKNALATAGH
                     QCVANRFTINHTADKLLDAI"
     gene            complement(1279..2037)
                     /locus_tag="WJJ54_001771"
     CDS             complement(1279..2037)
                     /locus_tag="WJJ54_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEZ7342600.1"
                     /translation="MKKVSVLIVAKNEANHIQECIESCRFDKEVIVIDDYSTDNTAEI
                     AEGLGAKVFRRHLNGDFGAQKTFAIEQAGGEWVFLIDADERCTPELSDEISKIVQTGD
                     YAAYFVERRNLFPNHPATHGAMRPDSVCRLMPKKDSSVQGKVHETVQTPYPKRRLKHF
                     MYHYTYDNWEQYFNKFNKYTSISAKKYREQGKPVRFVRDIILRPIWGFFKIYILNKGF
                     LDGKMGWIMSVNHSYYTMIKYVKLYYLYKSGGKF"
     gene            complement(2112..2187)
                     /locus_tag="WJJ54_001772"
     tRNA            complement(2112..2187)
                     /locus_tag="WJJ54_001772"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2152..2154),aa:Ile,seq:cat)
     gene            complement(2241..3377)
                     /locus_tag="WJJ54_001773"
                     /pseudo
     CDS             complement(2241..3377)
                     /locus_tag="WJJ54_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247614.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
     gene            complement(3322..>3488)
                     /locus_tag="WJJ54_001774"
     CDS             complement(3322..>3488)
                     /locus_tag="WJJ54_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ7342601.1"
                     /translation="FIHYRINHSKEFADRQNHINGIENFWNQAKRVLRKYSGLARTFP
                     RIGSATGCAD"
BASE COUNT          792 a          839 c          921 g          936 t
ORIGIN      
        1 tctactatac attgtaacaa agcacttgat gcggcagcac aagccgggga agacgctgca
       61 aaactttgcc aataggctgc gtaatatcgg gggatattgg gattttctta tttttaagga
      121 tggattcggg gtgtttcttt ccaatgaacg aatataattt ggcggtttgt tgcatcaaag
      181 gctttcagac ggcatatgcc gtctgaaagc agtttatatt gcatccaata atttgtcggc
      241 ggtatggttg atggtaaaac ggttggcgac gcattgatgt cctgccgttg ccagtgcgtt
      301 tttcgtttca gggttcaaga cgaggcgttc gatttcgtcc gccaaagatt caggtgtcag
      361 cctgtccagc agaatccccg attgatgatg ttcgataatt tccttttgcg cccccaaagt
      421 attggaaatc accgccgttc ggcagtacat cgcctcgcat aatgacaaac cgaatgcctc
      481 cgggacgagg ctgggcaaaa ccacgacatc gctttggcgg taaaacgaag caagtttttc
      541 ggtaaaccct tcaaaagaaa caaatggttc tgctcctgaa gcagatacgt cccgcttcag
      601 gcggcacata taatccggat gtccgtcccc tgccaatttg agcctgattt gaggatattt
      661 ccgatgcagt atcacacagg cttcaatcag gttttccaat cctttttctg gactgatcct
      721 gccggcgtag gcgacggtaa aaaaacggct gtcgggtttt tcttgagagg gagggaagcg
      781 atcggtatcg ataccgttat gaacaatccg gtatttttct ttaaagggat tgtcggcggt
      841 ttgcacatcg taaaccagac gggaaacgca aataaagcgg tcggtgtttt tctgtatcag
      901 gcggtgataa aaatcagttt tgttggcgac aacattatgt ttgacaaata tcaggcgcac
      961 cccggtcagt tttttcaaaa gtatggataa ggcggcaatt ttgccggtgt gtatcatcag
     1021 gtgggaaatg cggtttttcc ggataaagcg ggtaagtgcg tagagcgaaa acagcccgtt
     1081 gagcgtgtga aggcgcgttg tgaaaacgga agaaacttcg gaaaatcgcc tgtgcatcaa
     1141 ttcattattt ttattgacgg cggtaaacat tgtgcagtcc cgaagcccca atgcttttga
     1201 aacatcatag acatattgtt cgcctccacc ccaaatcttg gccgatacga tatttaatat
     1261 cctgaattct ttttccattt aaaattttcc gccggatttg tacagataat atagtttgac
     1321 atatttaatc atcgtgtaat agctgtggtt gacggacata atccaaccca tttttccatc
     1381 aagaaaccct ttgttcagga tataaatttt gaaaaacccc caaatcgggc ggaggataat
     1441 gtccctaacg aaacgcacgg gctttccctg ctctcggtat tttttggctg aaatggaagt
     1501 atatttgttg aacttgttga aatattgttc ccagttgtcg tacgtgtagt ggtacataaa
     1561 atgcttcaga cggcgtttgg ggtagggggt ttgtacggtt tcgtgtactt tgccttgcac
     1621 cgaactgtct tttttcggca tcagacggca tacgctgtcg ggacgcatcg cgccgtgtgt
     1681 ggcgggatgg ttggggaaaa ggttgcggcg ttcgacaaaa taggcggcat aatcgccggt
     1741 ttggacaatt tttgagattt catcagatag ttccggcgtg cagcgttcgt ctgcatcaat
     1801 caggaaaacc cattctccgc ctgcctgttc gatggcaaat gttttttgcg ctccgaaatc
     1861 cccattcaaa tgccgtctga agacttttgc gcccaaaccc tcggcaattt cggcagtatt
     1921 gtcggtgctg tagtcgtcga taacgatgac ttctttatcg aaacggcaac tttcaataca
     1981 ttcctgaatg tggtttgctt cgtttttggc aacaatcaat acgctgactt ttttcattat
     2041 caaggtttct caaagcattt tggtttcaca gggcggcaaa aaagcccaaa catacgtccg
     2101 ggcttgggaa ttggtgggtc cggtggggtt cgaacccacg accaagggat tatgagtccc
     2161 ctgctctaac ccctgagcta cagacccgtc aagagtaggc gcgtattgta tagcatagtg
     2221 gtgggattga caaacttatt tcatccgatg attaagacgc agttgcttcc tccgaaggca
     2281 aacgacgagc tggcggcaat gtgtttttcc gttgtctaga agctgccgct gccggtcagg
     2341 ttaatggcgg gcaggtcggg gtcgttctgc ccgtcccaaa gctggggcgg aagttttcct
     2401 tcgggattgc tttgccggtc ggcaaagccc cacgcgaacg cggcttcgat tgcgcccgcc
     2461 gcacccagcg tgtgtccggt ttgcggcttg gtggacgtgc agggcgtatt gttgccgaaa
     2521 accgctgcaa cggcacggct ttccatactg tcgttgtggt gcgtcccggt gccgtgcaga
     2581 ttaatccagc cgatgtcttc gggcgcaaga cctgcgtgtt gcaatgccgt ctgaaaggca
     2641 aggattgcgc cttgcgcgtc ggggcggggc gtggaaatat ggtaggcatc gctgttggct
     2701 ccgtagccga cgagttcggc gtaaattatc gcaccgcgcc gtttggcgtg ttccaattct
     2761 tccagcacga aaatccccgc gccttcgccg atgaccagcc cgtcgcggtt cgcgtcgtat
     2821 gggcgcgggg ttttttccgg ttcgccgttg cggcggctgg cggcataaag cgagtcgaaa
     2881 acatacactt cggacgggaa aaattcttcg cctccgcccg ccagcatcat atcggtcaga
     2941 ccgtatttga tggcttcgta ggcataacct atgccttggc tgccggacga acacgcgctc
     3001 gatgtcggga tgatgcgtcc tttcagtccg aaaaagatgc cgatattggc ggcggcggtg
     3061 tacggcatca tacgcacata ggtgttggca ctgaagttgc gcgacatgcc ggtcagcaac
     3121 aattcgccta catcgccgat gtctttggtg ctgccgctgg aagagccgca ggcaacgccc
     3181 atccgtccgt cggtaatgct ttcgtccccg agcaaaccgg catccgtcaa agcctgctcc
     3241 gccgcatcga cgcacaaata cgacacacgc cccatacttc tgagctgctt gcgcgtccaa
     3301 tgtttcggcg gcgcgtaatc ctcaatcggc gcacccagtt gcgcttccaa ttcggggaaa
     3361 cgttcgtgcc aatccactat attttcgcaa gacgcgtttt gcctgattcc aaaagttctc
     3421 aatgccgtta atgtggtttt gacggtctgc aaattccttg gaatggttga tgcggtaatg
     3481 gataaaac
//
LOCUS       DAWKJW010000178         3474 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.178, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000178 DAWKJW010000000
VERSION     DAWKJW010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3474)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3474)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3474
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.178"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            219..1691
                     /gene="pyk"
                     /locus_tag="WJJ54_001775"
     CDS             219..1691
                     /gene="pyk"
                     /locus_tag="WJJ54_001775"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEZ7342602.1"
                     /translation="MNQTSRDLTRISHNTKIVATLGPGSNNVELLEDMIRVGGLNVVR
                     FNFSHGTPEFHQENARIVREAAKRAGQEIAIIADLQGPKIRVGKIAGGGIELNKGETL
                     LLDAALEGEGTREAVGLDYRDLPDDVAAGDVLWLDDGLLTLTVESVEGSRIITRVENS
                     HVLKSNKGINKRGGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKV
                     EEEMKGSTAVRPGLVSKIERVEAIENLDEIILAGDGIMVARGDLAVEVGHAAVPALQK
                     RMIRRARELRRFSITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGA
                     YPFETVSQMAIICAAAEKEQDSLNGVAEQVEYPEAVSTNLAVAGGAVSVARAVHAKAI
                     VALTESGSTAFEISRHNITLPIFALTPSVSAQRRMAMYRGVRPLILATSTDHDTALNE
                     VETMLVEHNILHSGDQYIITSGSQMRESGSTNTLEVLRVK"
     gene            2001..3401
                     /locus_tag="WJJ54_001776"
     CDS             2001..3401
                     /locus_tag="WJJ54_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEZ7342603.1"
                     /translation="MTPSALKKTVLLLGTAFAAASAQASGYHFGTQSVNAQSTANAAA
                     AEAADASTIFYNPAGLTKLDSSQISVNANIVLPSIHYEADSATDFTGLPVQGSKNGKI
                     TKTTVAPHIYGAYKVNDNLTVGLGVYVPFGSATEYEKDSVLRHNINKLGLTSIAVEPV
                     AAWKLNERHSFGAGIIAQHTSAELRKYADWGIKSKAEILTAKPPKPNGAAEAAKIQAD
                     GHADVKGSDWGFGYQLAWMWDINDRARVGVNYRSKVSHTLKGDAEWAADGAAAKAMWS
                     TMLAANGYTANEKARVKIVTPESLSVHGMYKVSDKADLFGDVTWTRHSRFDKAELVFE
                     KEKTVVKGKSDRTTITPNWRNTYKVGFGGSYQISEPLQLRAGIAFDKSPVRNADYRMN
                     SLPDGNRIWFSAGMKYHIGKNHVVDAAYTHIHINDTTYRTAKASGNDVDSKGASSARF
                     KNHADIIGLQYTYKFK"
BASE COUNT          898 a         1053 c          881 g          642 t
ORIGIN      
        1 gacagtccca aaaataaatt tagcctaagt cataaaaccg tgtaattttg caccaaaaaa
       61 ggcggtttgc aggtaaaata tcaaactatt aatttaaatc atatttttac agaatattcc
      121 gccgcgttca tcaaatggac atcaaaccgg ttccaaattt ctgtaatttt gtaacaaaat
      181 accgcaaaac acccgattga gaccaaaagg actttcatat gaaccagaca agccgcgatc
      241 tgacccgcat cagccacaac accaaaatcg tcgccaccct tgggccgggc agcaacaacg
      301 tcgaactgtt ggaagatatg atccgcgtcg gcggcctgaa cgtcgtccgc ttcaacttca
      361 gccacggcac gcccgaattc catcaggaaa acgcccgcat cgtgcgcgaa gcggcaaaac
      421 gcgccggaca ggaaatcgcc atcattgccg acctgcaagg gccgaaaatc cgcgtgggca
      481 aaatcgccgg cggcggcatc gaattgaaca aaggcgaaac gctgctactg gatgccgcgc
      541 ttgaaggcga aggcacgcgc gaggcggtcg gtttggacta ccgcgacctg cccgatgacg
      601 ttgccgcagg cgatgtcttg tggctggacg acggcctgct gaccctgacc gtggaatccg
      661 tcgaaggcag caggattatc acaagggtgg aaaacagcca cgtcctgaaa agcaacaagg
      721 gcatcaacaa acgcggcggc ggtctgtccg caggcgcgtt gaccgaaaaa gacttccgcg
      781 acctgaaaac cgcgattgcc atcggttgcg actacctcgc catcagcttt gtgaaatccg
      841 ccgaagattt gcatatcgcg cgcgccaaag tcgaagaaga aatgaaaggc agcacggccg
      901 tgcgccccgg tttggtttcc aaaatcgaac gcgtagaagc gattgaaaac ttggacgaaa
      961 tcatcctcgc cggcgacggc attatggttg cgcgcggcga cttggcggtc gaagtcggac
     1021 acgccgccgt ccccgccctg caaaaacgga tgatccgccg cgcccgcgag ttgcgccgct
     1081 tcagcattac ggcgacgcaa atgatggaat cgatgattac caaccccgta ccgacccgcg
     1141 cggaagtcag cgatgtggca aacgcggtat tggacggtac cgatgcggtg atgtgttccg
     1201 ccgaaaccgc cgtcggcgcg tatccgtttg aaaccgtcag ccaaatggcg attatctgcg
     1261 cggctgcgga aaaagagcag gattcgctca acggcgttgc cgaacaggtc gagtatcccg
     1321 aagcggtcag caccaacctg gcggttgccg gcggtgcggt cagcgtggcg cgcgcggttc
     1381 acgccaaagc catcgtcgcc ctgaccgaaa gcggttcgac cgcctttgaa atcagccgcc
     1441 acaacatcac cctgccgatt ttcgcgctga ccccgagcgt ttccgcccaa cgccgtatgg
     1501 cgatgtaccg gggcgtgcgc ccgctgattt tggcaaccag caccgaccac gacacggcgt
     1561 taaacgaagt cgaaaccatg ctggtggaac acaacatcct gcattccggc gaccaataca
     1621 tcattaccag cggctcgcaa atgcgcgaat ccggttcgac caatacgctg gaagtgctgc
     1681 gcgtcaaata atccgccctg agtggaaaat gccgtctgaa gtcgatgccc gaggcttcag
     1741 acggcatttt ttgcggcggc gcggcggttc gggcaaactc tgaaaaaatt gtgcaaatcc
     1801 ggcaacatcg gataaaatcg agtacctata ctaaagcgaa acaaggcatt tccgactgcc
     1861 ttttttatag tggattaaat ttaaaccagt acggcgttgc cttgccgtac tatctgtact
     1921 gtctgcggct tcgtcgcctt gtcctgattt ttgttaatcc actatattta tccaccgtcc
     1981 gcctttttac ggaaaccgaa atgacccctt ccgcactgaa aaaaaccgtc ctactgctcg
     2041 gcactgcctt tgccgccgca tccgcacaag cctccggcta ccacttcggc acacagtcgg
     2101 tcaacgcgca aagcacggca aatgccgccg ccgcagaagc cgccgacgca tcgaccatct
     2161 tctacaaccc tgccggcctg accaaactcg acagcagcca gatttccgtc aacgccaaca
     2221 tcgtgctgcc cagcattcat tatgaggcgg attccgccac cgactttacc gggcttcccg
     2281 tccaaggttc gaaaaacggc aaaatcacca aaaccacggt tgcgccccac atctacggcg
     2341 catacaaagt caacgacaat ctgaccgtag gcttgggcgt gtacgtcccc ttcggttctg
     2401 ccaccgaata cgaaaaagat tccgtgttgc gccacaacat caacaaactc ggtctgacca
     2461 gcatcgccgt cgaacctgtc gccgcgtgga aactcaacga acgccattcc ttcggcgcag
     2521 gcatcatcgc ccaacatact tccgccgagc tgcgcaaata tgccgactgg gggattaaga
     2581 gtaaagcaga gatattgacg gcaaaaccgc ccaaacctaa cggtgcagcc gaagctgcaa
     2641 aaattcaggc cgacggacac gccgatgtca aaggcagcga ttggggcttc ggctaccaac
     2701 tggcgtggat gtgggacatc aacgaccgcg cgcgcgtggg cgtgaactac cgttccaaag
     2761 tctcgcacac gctcaaaggc gatgccgaat gggcggcaga cggcgcggcg gcgaaagcaa
     2821 tgtggagtac gatgcttgca gcaaacggct acacggcgaa tgaaaaagcc cgcgttaaaa
     2881 tcgttacgcc tgagtctttg tccgtacacg gtatgtacaa agtgtccgat aaagccgacc
     2941 tgttcggcga cgtaacttgg acgcgccaca gccgcttcga taaggcggaa ctggtttttg
     3001 aaaaagaaaa aaccgtcgtc aaaggcaaat ccgaccgcac caccatcacc cccaactggc
     3061 gcaacaccta caaagtcggc ttcggcggtt cttatcaaat cagcgaaccg ctgcaactgc
     3121 gcgccggcat cgcttttgac aaatcgcccg tccgcaacgc cgactaccgc atgaacagcc
     3181 tgcccgacgg caaccgcatc tggttctccg ccggtatgaa ataccatatc ggcaaaaacc
     3241 acgtcgtcga tgccgcctac acccacatcc acatcaacga caccacctac cgcacggcga
     3301 aggcaagcgg caacgatgtg gacagcaaag gcgcgtcttc cgcacgtttc aaaaaccacg
     3361 ccgacatcat cggcctgcaa tacacctaca aattcaaata aacggcccgc cgtttgaatg
     3421 taacaatgcc gtctgaaaca gatttccgtt tcagacggca ttgttttagg ctcg
//
LOCUS       DAWKJW010000179         3442 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.179, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000179 DAWKJW010000000
VERSION     DAWKJW010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3442)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3442)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3442
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.179"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(268..906)
                     /locus_tag="WJJ54_001777"
     CDS             complement(268..906)
                     /locus_tag="WJJ54_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEZ7342604.1"
                     /translation="MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYG
                     RLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCVAASGP
                     LSNLAMAVLWGVVLVLTPYVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
                     IDTFLSAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV"
     gene            1161..2003
                     /locus_tag="WJJ54_001778"
     CDS             1161..2003
                     /locus_tag="WJJ54_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEZ7342605.1"
                     /translation="MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFV
                     DLGDFGGGDGAPEGAGAPAAPEPQPEPEPPKPVEPPKPVLKPVVTKKADADIQQPKEE
                     PKPEEKPKPEEKPKPEPKPEAKPVPKPAEKPVEKPSEKPAEHPSNASAKADSEQGNGE
                     DKGTGTKGDGTGRGEGSGKGSGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMEN
                     DEQGTVVLSVLVSPGGHVESVKIVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVK
                     FELN"
     gene            2069..2731
                     /gene="exbB"
                     /locus_tag="WJJ54_001779"
     CDS             2069..2731
                     /gene="exbB"
                     /locus_tag="WJJ54_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HEZ7342606.1"
                     /translation="MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARK
                     GNAAVKRHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLN
                     EYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMS
                     IAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQK
                     DS"
     gene            2734..3168
                     /locus_tag="WJJ54_001780"
     CDS             2734..3168
                     /locus_tag="WJJ54_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEZ7342607.1"
                     /translation="MAFGSMNSGDDSPMSDINVTPLVDVMLVLLIVFMITMPVLTHFI
                     PLELPTASEQTNKQDKQPKDPLRLTIDANGGYYVGGDSASKVEIGEVESRLKAAKEQN
                     ENVIVAIAADKAVEYDYVNKALEAARQAGITKIGFVTETKAQ"
BASE COUNT          906 a          798 c          973 g          765 t
ORIGIN      
        1 gggtttcggc tgtcgggagg gaaaggaatt ttgcaaaggt ctcagacggc aataaatcca
       61 gcatttgatt ggcaagtttt ggcgatgtga aaacctcatc attagacaga ctggagtttc
      121 ttaatcagtg tttcagttaa tgaaaggtat tatcatgcaa cttggttcta ataatgatga
      181 aaaaaataag attacactac aggaaaacgc ggcagggcaa tatgtcctgc cgcgttttct
      241 ggagcgttta tgccgtctga aagccagtca gacgaacatc tgcacaaacg caatcaccag
      301 ccgcacaatc ggtgcaataa acgcacccaa aaccccggtc agcatcagca gtaggataat
      361 ccacgtccca taaggttcga ttttgcggaa cgcttgcgaa tatttcgccg acaggaaggt
      421 gtcgatgaaa atgccgccgt cccaaggcag gatggggatg atgttgagcg cgaacagaat
      481 cgcattgatc agaataccgt agtttgccat ttgagccaac ggcatctgat acgccccgcc
      541 gacatacgga gtcagcacca aaaccacgcc ccacagaaca gccatcgcca gattcgacag
      601 cgggccggac gcggcaacgc aacgccaggc aaggcgcggg ttgcggaagt tgcgcgaatc
      661 gataggaatc ggacgcgccc agccgaacag gaagggcgtg aacatcaaag taagcagcgg
      721 tacgatgatt gtgccgacca aatcgatatg gggcaggggg ttcagtgtca gcctgccgta
      781 ttgttcggca gtgttgtctc cccagtagcg cgccgtatag ccgcgcgcca cctccctgac
      841 ggtaatggcg agcagcacgg gcaggacggc aagcagaaac acgcccaaat caaaattttg
      901 aaacatggtt ttcctttgaa cagatgtggt gtgcagcccg aaacggctga cagacagaag
      961 cggcaatata tcatctaacc tgattttatt ggaataagaa atcagacgga atcatttttt
     1021 ctgccggccc gttatctgat gatttgctgt aatacagcgt ttaaacacgg tttgcctgtg
     1081 aacggaacag acattcatat gaccaaaaat tgtaaaaata ggttgcaaat aggaattgtt
     1141 gctattatta tgcccgaatt atggataaag aacgaatttt aacccccgca gtcgtgtttt
     1201 ccgtcgcact gctgcatttg gcaatggtgg cattgctctg gcaggcgcac aagctgcccg
     1261 tgatagagtc aggaaatgtt atcgaatttg tcgatttggg tgattttggc ggaggggacg
     1321 gtgcacccga aggcgcaggt gcgcctgctg cgcctgagcc gcaacctgag cctgagccgc
     1381 ccaaacctgt cgagccgccc aagccggttt tgaagccggt ggttacgaaa aaggcggatg
     1441 cggatattca gcagcctaag gaagagccga aacctgaaga aaagccgaaa cccgaagaaa
     1501 aaccgaaacc agagcctaag ccggaagcga agcctgtccc gaaaccggcg gaaaaaccgg
     1561 tcgagaagcc gtctgaaaaa cctgccgaac atcccagcaa tgcttctgcc aaagcagaca
     1621 gcgagcaggg taatggggaa gataagggaa ccggtaccaa aggagacgga acggggcgcg
     1681 gagaaggcag cggtaaaggt agcggcggtg tcaaaggcga acacggggaa ggagccggca
     1741 gcagcaaagg caatccttta cgcgccaacg gcagcattcc gcgcccggct tatcccacgc
     1801 tttctatgga gaatgacgag cagggtacgg ttgttttgag cgttttggtt tctccgggcg
     1861 gtcatgtcga gtccgttaaa atcgtgaaaa gcagtggttt ttcccggttg gacaatgcgg
     1921 cacgcaaggc ggcgcaaaac gggcattttc aagccaatgc ctggacggag tttaaagtcc
     1981 ccgtcaagtt tgaattgaat taggcggttg ccgcagcggt ttgcggcagc ttggatgttt
     2041 gattggtttt ttcagtgttg gaatcattat gaatttgaaa ttagtatttg aatcgggcga
     2101 tcccgtcctg atcggtgtgt ttgtgttgat gctgttgatg agtatcgtaa cgtggtgttt
     2161 ggttgtcttg cgctgcatca agctgtatcg ggcgcgcaaa gggaatgccg ccgtcaaacg
     2221 gcatatgcgc gatactttgt cgctgaacga cgcggtcgaa aaagtgcgcg ccgtcgatgc
     2281 gcctttgtct aaactggcgc aagaggcatt gcagtcttac cgcaactacc gccgaaacga
     2341 agcgtccgaa ctggcgcagg ctttgccgtt gaacgagtat ttggtcattc aaatccgcaa
     2401 cagtatggcg cagattatgc gccggtttga ttacgggatg accgcgcttg cctccatcgg
     2461 cgcgaccgcg ccgtttatcg ggctgttcgg cacggtttgg gggatttacc acgccctgat
     2521 caatatcggg caaagcgggc agatgagtat tgcggcggtt gccggcccga ttggcgaggc
     2581 actggtggcg acggcggcgg gtttgttcgt ggcgattccg gcggtgttgg catacaactt
     2641 cctcaatcgc ggcacaaaaa tactgaccca ggatttggat gcgatggcgc acgatttgca
     2701 cgtccgcctg cttaatcaaa aggatagctg attatggcat ttggttcgat gaattccggc
     2761 gacgattctc cgatgtccga catcaacgtt acgccgttgg tggacgtgat gctggtgttg
     2821 ctgattgtgt ttatgattac tatgccggtg ctgacgcatt tcatcccttt ggaactgccg
     2881 accgcgtccg agcagacaaa caagcaggac aaacagccta aagaccccct gcgcctgacg
     2941 attgatgcga acggcggcta ttatgtcggc ggggattctg caagcaaagt ggaaatcggg
     3001 gaagtggaaa gccgtctgaa agccgccaag gagcagaatg aaaacgtgat tgtggcgatt
     3061 gcggcagaca aggcggtgga atacgattat gtaaacaaag ctttagaagc cgcccgtcag
     3121 gcaggaatca ccaaaatcgg ttttgtaacc gaaaccaagg cgcaataaag ttcgacgctt
     3181 gaacgaatgc cgtctgaaag tctttcagac ggcatttctt atgtttaatc agctatatat
     3241 agttgattaa aacaaaaatg agacgacaga gcgccgtctc catttctgcg caggcgggaa
     3301 tacaaacatc tgatttttct tttattttca aacattactg aaatgggtaa gtctggagtc
     3361 ctgcctgcgc gagaataatg aaaatgtgca tttctaattt ttatagtgga ttaacaaaaa
     3421 tcaggacaag gcaacgaagc cg
//
LOCUS       DAWKJW010000180         3428 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.180, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000180 DAWKJW010000000
VERSION     DAWKJW010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3428)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3428)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3428
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.180"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            43..711
                     /locus_tag="WJJ54_001781"
     CDS             43..711
                     /locus_tag="WJJ54_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tfp pilus assembly protein FimT/FimU"
                     /protein_id="HEZ7342608.1"
                     /translation="MCTRKQQGFTLTELLIVMAIAAIMAMIALPNMSQWIASRRIASH
                     AERVANLLRFSRGEAVRLNLPVYICPVQVKKDGAPNNKCDSGKKGQGMLAFGDKNGNK
                     IYDNDTADVLLRSVVLNDDINNKRINYAFNHIAFGQTQPTADRVVWTFNQNGTFGYTK
                     DQHLTSKSSFFYSDGYIQIVLTDARAVSDADKKFRSAVVLINSSGRVEVCPRNDRRTV
                     CQYK"
     gene            741..1361
                     /gene="pilV"
                     /locus_tag="WJJ54_001782"
     CDS             741..1361
                     /gene="pilV"
                     /locus_tag="WJJ54_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HEZ7342609.1"
                     /translation="MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVA
                     SVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKNYNLYMGNHTLPHTLSAVDGDFA
                     IDAMKTKGQLAEAQLKRFSYELKNALPDAAAIHYTVCKDSSGNAPTLSGSTFSQNCDG
                     SANGDTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE"
     gene            1358..2323
                     /locus_tag="WJJ54_001783"
     CDS             1358..2323
                     /locus_tag="WJJ54_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HEZ7342610.1"
                     /translation="MRRKMLNVPKGSYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFT
                     SRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFGCFNMSEHTEKNVVSDVAQKNRL
                     FSLKGSSANKLIPNGTDNKLIPITESLDIGYQGFTQRLNALVFQYGIDDLDASAETVV
                     VSSCSKIAKPGKKISTLQEAKSALQITNDDKQNGNITRQRYVVNAYAVGRIAGEEGLF
                     RFQLDDKGKWGNPQLLVKKINKMDIRYIYVSDCPEDDDAGKEEKFKYTGTFDSSTNAV
                     TPAGVEVLLSSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTL"
     gene            2302..2901
                     /locus_tag="WJJ54_001784"
     CDS             2302..2901
                     /locus_tag="WJJ54_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HEZ7342611.1"
                     /translation="MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNT
                     EQRISANESDRKLALSLAEAALREGELQVLDLEYDTDSKVTFSENCGEGLCTAVNVRT
                     NTNNDNEEAFDNIVVQGKPTVEAVKRFCPANSTDLCIDKKGMEYKKGTRSVSKPPRYI
                     IEYLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE"
     gene            2906..3379
                     /locus_tag="WJJ54_001785"
     CDS             2906..3379
                     /locus_tag="WJJ54_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEZ7342612.1"
                     /translation="MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTE
                     MVGINNISKQFILKNPLDDNQTIKRKLEIFVSGYKMNPKIAKKYSVSVRFVDKEKSRA
                     YSLVGVPKAGTGYTLSVWMNSVGDGYKCRDKASAEAYSETLSADAGCEAFSNRKK"
BASE COUNT          985 a          673 c          867 g          903 t
ORIGIN      
        1 aatttaatcc acgatacatt accagttaac gttctattgc ctatgtgtac acgaaaacaa
       61 caaggtttca cgctaacaga gctgctcatc gtgatggcca ttgcagccat tatggcgatg
      121 atagccctcc ccaatatgag ccaatggatt gcatcccgcc gcattgccag tcacgcggag
      181 cgggttgcca accttttgcg tttctccagg ggcgaagccg tccggctcaa tctccctgtc
      241 tatatctgtc ctgttcaagt taaaaaagac ggtgcgccca acaataaatg tgactccggc
      301 aagaaggggc agggaatgtt ggcttttggc gataagaatg gcaataagat atatgacaat
      361 gatacggcgg atgttcttct ccgcagtgtg gtattgaatg atgatatcaa taataagcgg
      421 attaattatg ccttcaacca tatcgctttc ggtcagactc agccgaccgc tgaccgtgta
      481 gtttggacat tcaatcaaaa cgggacgttc ggttatacga aagaccagca tcttacaagc
      541 aaatccagct ttttttattc cgacggttat atccaaatcg tgctgacaga tgcgagagca
      601 gtttcagatg ccgataagaa attccgttcg gcggtggttt tgattaacag cagcggcagg
      661 gttgaggttt gtcctagaaa cgataggcgt accgtatgcc aatataaatg attgttttag
      721 tcggtttggg aaataaaaaa atgaagaata atgattgctt ccgcctgaaa aacccccagt
      781 ccggtatggc gctgatagaa gtcttggttg ccatgctcgt tctgaccatc ggtattttgg
      841 cactattgtc cgtacagttg cggacagtcg cttccgtcag ggaggcagag acgcaaacca
      901 tcgtcagcca aatcacgcaa aacctgatgg aaggaatgtt gatgaatccg accattgatt
      961 cggacagcaa caagaaaaac tataatcttt acatgggaaa ccatacacta ccgcatacac
     1021 tatcagctgt ggatggcgat tttgcgattg atgccatgaa aactaagggg caattggcag
     1081 aggcacaatt gaagagattt agttatgagc tgaaaaatgc cttgccggat gcggcagcca
     1141 tccattacac cgtctgcaag gattcgtcgg gtaatgcgcc gacattgtcc ggcagtactt
     1201 tttctcaaaa ttgcgatggt agtgcaaatg gggatacttt gattaaagta ttgtgggtaa
     1261 atgattcggc aggggattcg gatatttccc gtacgaatct tgaggtgagc ggcgacaata
     1321 tcgtatatac ttatcaggca agggtcggag gtcgggaatg agacgtaaaa tgctaaacgt
     1381 accaaaaggc agttatgatg gtatgaaggg ttttaccatt attgaatttt tggttgcggg
     1441 catgctcagt atgattgtcc tgatggcggt cggatcgagt tacttcacgt cccggaaatt
     1501 aaatgatgcg gcaaacgagc gtcttgctat tcaacaggat ttgcggaatg cggcaacatt
     1561 gattgtccgc gatgcaagaa tggcggggag cttcggttgt ttcaatatgt ctgagcatac
     1621 cgaaaagaat gttgtttccg atgtggcgca aaaaaaccgt cttttttcct taaaagggag
     1681 cagtgcaaat aaacttatcc ccaacggtac agataataaa cttatcccca taacggaatc
     1741 tttagatatc ggatatcagg gttttaccca gcgccttaac gcattggttt tccaatacgg
     1801 tatcgatgat cttgatgcga gtgctgagac tgttgtagtc agcagctgtt ccaaaatagc
     1861 aaaaccgggt aagaaaatat ctaccttgca agaagcaaag agtgcattac agattactaa
     1921 tgatgataaa caaaatggaa atatcacccg tcaaaggtat gtggtcaatg cctatgcggt
     1981 cggcaggatt gccggtgagg aaggtttgtt ccgcttccaa ttggatgata agggcaagtg
     2041 gggtaatcct cagttgttgg ttaaaaagat taataaaatg gatatacggt atatttatgt
     2101 ttccgattgt cctgaagatg acgatgccgg caaagaggaa aaattcaaat atacgggtac
     2161 attcgacagc tccacaaatg ctgttacgcc cgccggggtg gaggttttat tgagtagcgg
     2221 tactgatacc aagattgccg cttcttcaga caatcatatt tatgcttacc gtatcgatgc
     2281 gacaatacgc gggggaaatg tatgcgcaaa cagaacactt tgacgggaat cccgacttct
     2341 gacggacaga gggggtttgc actgtttatc gtgctgatgg tgatgatcgt cgtggctttt
     2401 ttggttgtaa ctgccgcgca gtcttacaat accgagcagc ggatcagtgc caacgaatca
     2461 gacaggaaat tggctttgtc tttggccgag gcggctttgc gggaaggcga acttcaggtt
     2521 ttggatttgg aatatgatac ggacagtaag gttacattta gcgaaaactg tggagaaggt
     2581 ctgtgtaccg cagtgaatgt gcggacaaat acaaataatg ataatgaaga ggcttttgac
     2641 aatatcgtgg tgcaaggcaa gcccaccgtt gaggcggtga agcgtttttg ccctgcaaat
     2701 tctaccgacc tgtgcattga caagaaaggg atggaatata agaaaggcac gagaagcgtc
     2761 agcaaaccac cgcgctatat tatcgaatat ttgggcgtga agaacggaga aaatgtttat
     2821 cgggttactg ccaaggcttg gggtaagaat gccaataccg tggtcgtcct tcaatcttat
     2881 gtaagcaata atgatgagta ataaaatgga acaaaaaggg tttacattga ttgagatgat
     2941 gatagtcgtc gcgatactcg gcattatcag cgtcattgcc ataccttctt atcaaagtta
     3001 tattgaaaaa ggctatcagt cccagcttta tacggagatg gtcggtatca acaatatttc
     3061 caaacagttt attttgaaaa atcccctgga cgataatcag accatcaagc gcaaactgga
     3121 aatatttgtc tcaggctata agatgaatcc gaaaattgcc aaaaaatata gtgtttcggt
     3181 aaggtttgtc gataaggaaa aatcaagggc atacagcttg gtcggcgttc cgaaggcggg
     3241 gacgggttat actttgtcgg tatggatgaa cagcgtgggc gacggataca aatgccgtga
     3301 taaggcttct gccgaagcct attcggagac cttgtccgca gatgccggct gtgaagcctt
     3361 ctctaatcgt aaaaaataag gttgttttgc cgatgccgtc tgaaaatcaa tgttcagacg
     3421 gcattttt
//
LOCUS       DAWKJW010000181         3328 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.181, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000181 DAWKJW010000000
VERSION     DAWKJW010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3328)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3328)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3328
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.181"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            153..605
                     /gene="dut"
                     /locus_tag="WJJ54_001786"
     CDS             153..605
                     /gene="dut"
                     /locus_tag="WJJ54_001786"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEZ7342613.1"
                     /translation="MNIEVEMKVLDERMADFIPAYATEGSAGLDLRACLDEEVVLQPG
                     ETFLVPTGLAIYLANPAYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNR
                     SSEPFTVKPFERIAQMVVVPIVQARFKRVEEFVGSSRGEGGFGSTGLH"
     gene            681..1868
                     /gene="dapC"
                     /locus_tag="WJJ54_001787"
     CDS             681..1868
                     /gene="dapC"
                     /locus_tag="WJJ54_001787"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HEZ7342614.1"
                     /translation="MNTLLNQLKPYPFARLREAMQGISAPEGLEAVPLHIGEPKHPTP
                     KVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREA
                     LFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSI
                     SEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNK
                     PLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSA
                     MSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPD
                     GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAETIVS
                     LYR"
     gene            2168..2947
                     /gene="yaaA"
                     /locus_tag="WJJ54_001788"
     CDS             2168..2947
                     /gene="yaaA"
                     /locus_tag="WJJ54_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HEZ7342615.1"
                     /translation="MFFVLSPAKNLNEKDPAPVSEFTQPDLLAESDILMQQLRELAPQ
                     QIAELMHVSDKIALLNAQRNAEWNTPFTPENAKQAVFMFNGDVYEGMDANTLDIGQIR
                     YLQNHVRLLSGLYGLLRPLDLIQPYRLEMGTAFANLRGKNLYEFWGDIITNLLNDTLA
                     QAGSNTLVNLASQEYFKSVNTKKLRARLITPIFKDEKNGQYKIISFYAKRARGLMVRY
                     AAEHHITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK"
     gene            3030..3120
                     /locus_tag="WJJ54_001789"
     tRNA            3030..3120
                     /locus_tag="WJJ54_001789"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3064..3066,aa:Ser,seq:tga)
     gene            3198..3287
                     /locus_tag="WJJ54_001790"
     tRNA            3198..3287
                     /locus_tag="WJJ54_001790"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3232..3234,aa:Ser,seq:cga)
BASE COUNT          875 a          776 c          821 g          856 t
ORIGIN      
        1 gtgtgcataa tgttcgtctt cataacggga agggcgggca ttatacactg gcaacggatt
       61 tcaaaacaaa accgatttgc cgtgtttcag cgtaaacacg gcttgtgtat aatctcccat
      121 ctttgaaatc ggccgtatgc aggagcaaga cgatgaatat tgaagtagaa atgaaagtat
      181 tggacgagag gatggcggat tttatccctg cctatgcaac ggagggttct gcaggtttag
      241 atttgcgcgc ctgtttggat gaggaagtcg ttttgcagcc gggtgaaacg tttcttgtgc
      301 cgacgggttt ggcaatttat ttggcgaatc ccgcatatgc cgccgttttg ctgccccgtt
      361 ccggcttggg gcataaacac ggcattgttt tgggcaattt ggtcggtttg attgactccg
      421 attatcaagg ggaattgaag gtgtcgttat ggaacagaag cagcgaaccg tttactgtca
      481 aaccgtttga gcgtatcgcg cagatggttg tcgtgccaat cgtgcaggcg cgtttcaaac
      541 gtgtcgagga atttgtcgga agcagccggg gtgagggcgg cttcggcagt acgggtttgc
      601 attgaatata aaatgccgtc tgaagggcac gttaggttca gacggcatat cttccgatat
      661 accgacaacc ggagaaaatc atgaatacct tactcaacca actcaaaccc tatccctttg
      721 cccgactgcg tgaagcgatg cagggcattt ccgcgcccga aggtctggaa gccgtccccc
      781 ttcacatcgg cgaaccgaaa catccgacac cgaaagtcat tacggatgcg ctgaccgcct
      841 cattgcacga gttggaaaaa tatccgctga cggccggtct gcctgaactg cgtcaggcgt
      901 gtgcaaactg gttaaaacgc cgttacgatg gcttgacagt ggatgcggat aatgaaattc
      961 tgccggtttt aggcagtagg gaggcgttgt tttcttttgt tcaaaccgtg ttgaaccctg
     1021 tttcagacgg catcaaaccc gcaattgtca gcccgaatcc cttttatcag atttacgaag
     1081 gtgcgacact tttgggcggc ggtgaaatcc attttgccaa ttgccccgcg ccgtctttca
     1141 accccgattg gcgtagtatt tccgaagagg tttggaaacg caccaaactg gtgttcgtct
     1201 gctcgcccaa caaccccagc ggcagcgtac tggatttgga tggatggaaa gaagtttttg
     1261 atttacagga taaatatggt ttcattattg cctcggatga atgctattcc gaaatctatt
     1321 tcgacggcaa caaaccttta ggctgcctgc aggccgctgc acagttgggt cgaagcaggc
     1381 aaaaactgct tatgttcacc agtttgtcca agcgttccaa cgttccgggc ctgcgttccg
     1441 gttttgtcgc cggcgatgcc gaactgctta aaaactttct gctttacaga acctatcacg
     1501 gcagtgcaat gagcattccc gtgcagcgcg caagtattgc cgcttgggat gacgaacagc
     1561 acgttatcga caaccgccgc ctgtatcagg aaaaatttga gcgcgttatt cccattttgc
     1621 aacaggtatt tgatgttaaa ttaccggatg cctcgtttta catctggttg aaagtccccg
     1681 atggcgacga tttggcattt gcacgcaatt tatggcaaaa agccgctatc caagtattgc
     1741 ccggacgctt tttggcacgg gataccgaac agggcaatcc cggggaaggt tatgtccgta
     1801 tcgctttggt tgccgatgtc gcaacttgtg tcaaagctgc ggaaaccatt gtttccctat
     1861 atcggtaaag aataaaaaaa tgccgtctga acttttgttc agacggcatt tttcaatatt
     1921 ttacggttga atttgctata acggtattta tagtggatta acaaaaatca ggacaaggcg
     1981 acgaagccga agacagtaca gatagtacgg caaggcgacg aagccgaaga cagtacagat
     2041 agtacggcaa ggcgaggcaa cgctgtactg gtttaaattt aatccactat acttcacttt
     2101 taatcggctt gcccgcaaac acgtttaaac ttaaaatccc cgtgtttgac acaataccga
     2161 gcagattatg ttttttgtcc tttcccctgc gaagaacctt aatgaaaaag accctgcccc
     2221 tgtcagcgag tttacccaac ccgacctgct ggcagagtcc gacattctaa tgcagcagtt
     2281 gcgcgagctt gcgccgcaac agattgccga actgatgcac gtttccgaca aaattgccct
     2341 cttaaacgcg cagcgcaatg cagaatggaa cacgccgttt acgccggaaa acgccaaaca
     2401 ggcggtcttt atgttcaacg gcgatgttta cgaaggtatg gatgcaaaca cattggatat
     2461 tggacagata cgctatctgc aaaaccatgt ccgcctgctg tccggtctgt acggtcttct
     2521 tcgcccgtta gacctgatac agccctatcg tttggaaatg gggacggcat ttgccaattt
     2581 gcgcggcaag aatttgtatg agttttgggg cgacatcatt accaaccttt taaatgacac
     2641 gcttgcccaa gcaggcagca atacgcttgt caaccttgcc tcacaggaat atttcaagtc
     2701 cgtcaacacg aaaaaacttc gggcgcggct gattaccccg atatttaaag acgaaaaaaa
     2761 cggtcaatat aaaatcatca gtttctatgc caagcgcgcg cgcggattaa tggtgcgcta
     2821 tgcggcagaa catcatatta ccgaccctga aatgctgaaa aattttaatt acgaaggcta
     2881 cgcattcaat gacgcggctt caaatgaaag cgaatgggtt tttatgcgtt cggaacaaat
     2941 aaagtgaaaa caataaatta agtattttcc gaaaaaagtg cttggcaaaa tgtataaatt
     3001 tcattattat tcctaatctt caagaagacg gaagcgtggc agagcggttt aatgcaacgg
     3061 tcttgaaaac cgtcgagggt tgatagccct ccgtgagttc gaatctcacc gcttccgcca
     3121 atccttgagg tcaaaaacca aataaaaatg aagtagcata aagcatcggc atttttattt
     3181 ggttttactg cattatcgga aacgtggcag agaggctgaa tgcagcggac tcgaaatccg
     3241 ctgagggtgc aaatcctccg tgggttcgaa tcccaccgtt tccgccacaa aacaaaaccg
     3301 ccctgattcg gggcggttct tttttgtt
//
LOCUS       DAWKJW010000182         3321 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.182, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000182 DAWKJW010000000
VERSION     DAWKJW010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3321)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3321)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3321
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.182"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            775..2907
                     /locus_tag="WJJ54_001791"
     CDS             775..2907
                     /locus_tag="WJJ54_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HEZ7342616.1"
                     /translation="MSIVSAPLPALSALIILAHYHGIAANPADIQHEFCTSAQSDLNE
                     TQWLLAAKSLGLKAKVVRQPIKRLAMATLPALVWCDDGNHFILAKTDGEGEHAQFLIQ
                     DLVTNKSAVLSFAEFSNRYSGKLILVASRASVLGSLAKFDFTWFIPAVIKYRRLFFEV
                     LVVSVVLQLFALITPLFFQVVMDKVLVHRGFSTLDVVSVALLAVSLFEIVLGGLRTYL
                     FAHTTSRIDVELGARLFRHLLSLPLSYFEHRRVGDTVARVRELEQIRNFLTGQALTSV
                     LDLAFSFIFLAVMWYYSSTLTWVVLASLPAYAFWSAFISPILRTRLNDKFARNADNQS
                     FLVESITAVGTVKAMAVEPQMTQRWDNQLAAYVASGFRVTKLAVVGQQGVQLIQKLVT
                     VATLWIGARLVIEGKLTVGQLIAFNMLSGQVAAPVIRLAQLWQDFQQVGISVARLGDI
                     LNAPTENASSHLALPDIRGEITFEHVDFRYKADGRLILQDLNLRIRAGEVLGIVGRSG
                     SGKSTLTKLVQRLYVPEQGRVLVDGNDLALAAPAWLRRQVGVVLQENVLLNRSIRDNI
                     ALTDTGMPLERIIEAAKLAGAHEFIMELPEGYGTVVGEQGAGLSGGQRQRIAIARALI
                     TNPRILIFDEATSALDYESERAIMQNMQAICANRTVLIIAHRLSTVKTAHRIIAMDKG
                     RIVEAGTQQELLAKPNGYYRYLYDLQNG"
     gene            3131..>3321
                     /locus_tag="WJJ54_001792"
     CDS             3131..>3321
                     /locus_tag="WJJ54_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEZ7342617.1"
                     /translation="MSTFFRQTAQAMIAKHINRFPLLKLDQVIDWQPIEQYLNRQKNR
                     YLRDHRGRPAYPLLSMFKAV"
BASE COUNT          726 a          765 c          887 g          943 t
ORIGIN      
        1 tattttttaa tgttttgtac ttttcttaag catccctcag cttgaaaata taaaactgcg
       61 tgtctacctg ccgaaagttc gcaccctaca cacgcaggct gcgcttgttt tttgggatgt
      121 agggtaggca tttatgccca cacggtttca ggctgccttg aaatatgaaa cgcgtggggc
      181 agcaagtgcc caccctacgc ttgctccata agacataatc aactgtgcaa taaattgtat
      241 aagaggatta tatttgtaca taatttttat ctctatgttt ctgattggtt tatgatattc
      301 gaagcctcct tagaatttaa gtagatagtt ttccttgtca cttcgcgcgt tgcttgtcat
      361 tgataataag tcactttact cctttcttga aatttactcc tttcttgaaa aatcgtcaag
      421 aacagttatc aatctttaaa atctatttaa aacaaaaata tacagatatt tcaggctgcc
      481 tgaaacacaa aaaataacat tacccgaccg caacagagtt cggagcagcc tgcaccttaa
      541 ccctgtgcct taacggtatg caggaggcac gagaggtgcg aggcatcctc atctaactcg
      601 attcctaagc cgttttacct tcctgaaacg agaacttttc catactttct ctttacaatt
      661 cccatatata tccttacaat gcgttctgct gttttattta tatatttctt tctacttaat
      721 atattccttt tccagccagc cgttatccac atccaatcta actatatttt atttatgtct
      781 atcgtatccg caccgctccc cgccctttcc gccctcatca tcctcgccca ttaccacggc
      841 attgccgcca atcctgccga tatacagcat gaattttgta cttccgcaca gagcgattta
      901 aatgaaacgc aatggctttt ggccgccaaa tctttgggat tgaaggcaaa ggtagtccgc
      961 cagcctatta aacgtttggc tatggcgact ttacccgcat tggtatggtg tgatgacggc
     1021 aaccatttta ttttggccaa aacagacggt gagggtgagc atgcccaatt tttgatacag
     1081 gatttggtta cgaataagtc tgcggtattg tcttttgccg aattttctaa cagatattcg
     1141 ggcaaactga tattggttgc ttcccgcgct tcggtattgg gcagtttggc aaagtttgac
     1201 tttacctggt ttattccggc ggtaatcaaa taccgccggt tgttttttga agtattggtg
     1261 gtgtcggtgg tgttgcagct gtttgcgctg attacgcctc tgtttttcca agtggtgatg
     1321 gacaaggtgc tggtacatcg gggattctct actttggatg tggtgtcggt ggctttgttg
     1381 gcggtgtcgc tgtttgagat tgtgttgggc ggtttgcgga cgtatctgtt tgcacatacg
     1441 acttcacgta ttgatgtgga attgggcgcg cgtttgttcc ggcatctgct ttccctgcct
     1501 ttatcctatt tcgagcacag acgagtgggt gatacggtgg ctcgggtgcg ggaattggag
     1561 cagattcgca atttcctgac cggtcaggcg ctgacttcgg tgttggattt ggcgttttcg
     1621 tttatctttc tggcggtgat gtggtattac agctccactc tgacttgggt ggtattggct
     1681 tcgttgcctg cctatgcgtt ttggtcggca tttatcagtc cgatactgcg gacgcgtctg
     1741 aacgataagt tcgcgcgcaa tgcagacaac cagtcgtttt tagtagaaag catcactgcg
     1801 gtgggtacgg taaaggcgat ggcggtggag ccgcagatga cgcagcgttg ggacaatcag
     1861 ttggcggctt atgtggcttc gggatttcgg gtaacgaagt tggcggtggt cggccagcag
     1921 ggggtgcagc tgattcagaa gctggtgacg gtggcgacgt tgtggattgg cgcacggctg
     1981 gtaattgagg gcaagctgac ggtggggcag ctgattgcgt ttaatatgct ctcgggacag
     2041 gtggcggcgc ctgttatccg tttggcgcag ttgtggcagg atttccagca ggtggggatt
     2101 tcggtggcgc gtttggggga tattctgaat gcgccgaccg agaatgcgtc ttcgcatttg
     2161 gctttgcccg atatccgggg ggagattacg ttcgaacatg tcgatttccg ctataaggcg
     2221 gacggcaggc tgattttgca ggatttgaac ctgcggattc gggcggggga agtgctgggg
     2281 attgtgggac gttcggggtc gggcaaatcc acactcacca aattggtgca gcgtctgtat
     2341 gtaccggagc agggacgggt gttggtggac ggcaacgatt tggctttggc cgctcctgcc
     2401 tggctgcggc ggcaggtcgg cgtggtcttg caggagaatg tgctgctcaa ccgcagcata
     2461 cgcgacaata tcgcgctgac ggatacgggt atgccgctgg aacgcattat cgaagcagcc
     2521 aaactggcgg gcgcacacga gtttattatg gagctgccgg aaggctacgg caccgtggtg
     2581 ggcgaacaag gggccggctt gtcgggcgga cagcggcagc gtattgcgat tgcccgcgcg
     2641 ttaatcacca atccgcgcat tctgattttt gatgaagcca ccagcgcgct ggattatgaa
     2701 agtgaacgag cgattatgca gaacatgcag gccatttgcg ccaaccggac ggtgctgatt
     2761 atcgcccacc gtctgtccac cgttaaaacg gcacaccgga tcattgccat ggataaaggc
     2821 aggattgtgg aagcgggaac acagcaggaa ttgctggcga agccgaacgg atattaccgc
     2881 tatctgtatg atttacagaa cgggtagaag gcgggggatg ggcgtgtagg ctgctttttt
     2941 cgtaacgttc tgcgttttca gaccgtcgtt tactgggttt actgactgaa atgaaaccaa
     3001 agtgcaggct gccggaaaga ctttttctgt ctttttaggc agcctgcact tctttttcac
     3061 tcatctagag acctttgcaa aaatccccaa aatcccctaa attcccacca agacatttag
     3121 gggatttctc atgagcacct tcttccggca aaccgcccaa gccatgattg ccaaacacat
     3181 caaccgcttc ccgctattga agttggacca ggtgattgat tggcagccga tcgagcagta
     3241 cctgaaccgt caaaaaaacc gttacctccg agaccaccgc ggccgtcccg cctacccgct
     3301 gttgtccatg ttcaaagccg t
//
LOCUS       DAWKJW010000183         3320 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.183, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000183 DAWKJW010000000
VERSION     DAWKJW010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3320
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.183"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            117..1172
                     /locus_tag="WJJ54_001793"
     CDS             117..1172
                     /locus_tag="WJJ54_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEZ7342618.1"
                     /translation="MPSETRLPNFIRTLIFALSFIFLNACSEQTAQTVTLQGETMGTT
                     YTVKYLSNNRDKLPSPAEIQKRIDDALKEVNRQMSTYQPDSEISRFNQHTAGKPLRIS
                     SDFAYVTAEAVRLNRLTHGALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGI
                     DKIILKQGKDYASLSKTHPKAYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELH
                     GKGKNARGEPWRIGIEQPNIVQGGNTQIIVPLNNRSLATSGDYRIFHVDKNGKRLSHI
                     INPNNKRPISHNLASISVVADSAMTADGLSTGLFVLGETEALKLAEQEKLSVFLIVRD
                     KGGYRTAMSSEFEKLLR"
     gene            1198..1413
                     /gene="nqrM"
                     /locus_tag="WJJ54_001794"
     CDS             1198..1413
                     /gene="nqrM"
                     /locus_tag="WJJ54_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HEZ7342619.1"
                     /translation="MKTLLLTFGIFLTVIIGMAVGYIFSKRSIKGSCGGITALGMKKM
                     CDCDTPCDTLQKKLDEEKQAGGIRVDR"
     gene            complement(1537..2115)
                     /gene="grpE"
                     /locus_tag="WJJ54_001795"
     CDS             complement(1537..2115)
                     /gene="grpE"
                     /locus_tag="WJJ54_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEZ7342620.1"
                     /translation="MSEQTQQQNSEEAVENVEAVETVETVGNADGVQEQAAAEPAYED
                     LQARIAELEAQLKDEQLRTLANEQNLRRRHQQEIADTHKFAGQKFAVEMLPVKDYLEM
                     ALLDQSGNFDALKMGVQMTLNELQKAFDATQIKEINPKAGDKLDPNIHQAMQAVASEQ
                     EPNTVVGVMKKGYTLSDRVLRPAMVTVAQKEA"
     gene            2299..3117
                     /gene="cysE"
                     /locus_tag="WJJ54_001796"
     CDS             2299..3117
                     /gene="cysE"
                     /locus_tag="WJJ54_001796"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEZ7342621.1"
                     /translation="MKKDHLNTTGFDLWHTIREETAAAVSAEPMLASFLHQTVLRHES
                     LGSVLAYHLSSKLGSPIMDVRALFEIYQQALGSDTQIGKCVEADLKAIYERDPACDEY
                     SLPLLYFKGFHAIQAHRINHRLYLDGRKTLAYFLQNRMSEVFGVDIHPAARFGYGLML
                     DHATGFVAGETAVLGNNISILHGVTLGGSGKEGGDRHPKIGDGVMIGANASILGNIRI
                     GSNAKIGAGSVVVSDVPPSITVVGVPAKPVARSLKTPSADMDQNIQFAEIDFMI"
BASE COUNT          856 a         1000 c          742 g          722 t
ORIGIN      
        1 ccgccaccta aacgacgggc gatgccgtcc gaacaccctt cagacggcat cggcatagaa
       61 acataccggc cgttttgcga tataattcaa accatttgcc aaaaccgtca aacactatgc
      121 cgtctgaaac acgcctgccg aactttatcc gcaccttgat atttgccctg agttttatct
      181 tcctgaacgc ctgttcggaa caaaccgcgc aaaccgttac cctgcaaggt gaaacgatgg
      241 gcacgaccta taccgtcaaa tacctttcaa acaatcggga caaactcccc tcccctgccg
      301 aaatacaaaa gcgcatcgat gacgcgctta aagaagtcaa ccggcagatg tccacctatc
      361 agcccgactc cgaaatcagc cggttcaacc aacacacagc cggcaagccc ctccgcattt
      421 caagcgactt cgcatacgtt actgccgaag ccgtccgcct aaaccgcctg acacacggcg
      481 cgctggacgt aaccgtcggc cctttggtca acctttgggg attcggcccc gacaaatccg
      541 ttacccgtga accgtcgccg gaacaaatca aacaagcagc atcttatacg ggcatagaca
      601 aaatcatttt gaaacaaggc aaagattacg cctccttgag caaaacccac cccaaagcct
      661 atttggattt atcttcgatt gccaaaggct tcggcgttga taaagttgcg ggcgaactgg
      721 aaaaatacgg cattcaaaat tatctggtcg aaatcggcgg cgagttgcac ggcaaaggca
      781 aaaacgcgcg cggcgaaccg tggcgcatcg gtatcgagca gcccaatatc gtccaaggcg
      841 gcaatacgca gattatcgtc ccgctgaaca accgttcgct tgccacttcc ggcgattacc
      901 gtattttcca cgtcgataaa aacggcaaac gcctctccca tatcattaat ccgaacaaca
      961 aacgacccat cagccacaac ctcgcctcca tcagcgtggt cgcagatagc gcgatgacgg
     1021 cggacggctt gtccacagga ttatttgttt taggcgaaac cgaagcctta aagctggcag
     1081 aacaagaaaa actctctgtt ttcctgattg tcagggataa aggcggctac cgcaccgcca
     1141 tgtcttccga atttgaaaaa ctgctccgct aaacatacaa accgattagg aaacaccatg
     1201 aaaaccctgc tccttacctt cggcatcttc ctgaccgtca tcatcggtat ggcggtcggc
     1261 tatattttct ccaaacgcag catcaaaggc agttgcggcg gcattactgc cttgggtatg
     1321 aaaaaaatgt gcgactgcga cacaccttgc gacaccctgc aaaagaaact ggatgaagaa
     1381 aaacaggcag gcggcatacg ggttgaccgt taacaccgaa acaaaatgcc gtctgaagcc
     1441 cgacaggcgg gttcagacgg cattgccgct ttacttcgat cggtttatac gcaaaacgcg
     1501 cttcaggaaa taaatcagat tattccccag acgccttcag gcttccttct gtgccaccgt
     1561 aaccatagcc gggcgcaaca cgcggtcgga cagcgtataa cccttcttca tcacgcccac
     1621 cacggtattg ggttcctgtt cgcttgccac cgcctgcatc gcctgatgga tattcggatc
     1681 gagcttatcg cccgctttag gattgatttc cttgatttgc gtagcatcaa atgctttctg
     1741 caactcgttc aaagtcatct gcacgcccat tttcagcgca tcgaaattgc cgctctgatc
     1801 caaaagcgcc atttccagat aatccttgac cggcagcatt tccacggcaa acttctgtcc
     1861 ggcgaacttg tgcgtatccg caatttcctg ctggtggcgg cggcgcaggt tttgctcgtt
     1921 tgccaaagtg cgcagctgct cgtctttcaa ctgcgcttcc agctcggcaa tccgcgcctg
     1981 caaatcctca taagccggct ctgcggcagc ctgttcctgc acaccgtccg catttcctac
     2041 tgtctcgacg gtttccaccg cctccacatt ttcaaccgct tcttcactgt tttgctgctg
     2101 tgtctgttcg ctcatatcgt atcccttaaa acaaattgga aatcaaaatc cagttattac
     2161 ccgcgcaaga taaggacatt ttcaagaaac ttcaagcaaa agcagagaat ttcaaattca
     2221 ttttcaaatc ccctaccgaa aaaataatat agacggtaag atactgccga ccatatcgat
     2281 tttcaaacat catcactcat gaaaaaagac catttaaaca caaccggttt cgacctctgg
     2341 cacaccatcc gcgaagaaac cgcggccgcg gtctccgccg aaccgatgct ggcaagtttt
     2401 ttgcaccaaa ccgtgttgcg ccacgagtcc ctcggctccg tccttgccta ccacctttcc
     2461 agcaaactcg gcagcccgat tatggacgtg cgcgcgctgt ttgaaatcta ccagcaggcg
     2521 ttgggcagcg acacccaaat cggcaaatgc gtcgaagcag acttaaaagc catctacgaa
     2581 cgcgatcccg cctgcgacga atattcgctg ccgcttttat atttcaaagg cttccacgcg
     2641 attcaggcac accgcatcaa ccaccggctg tatctcgacg ggcgcaaaac gctggcgtat
     2701 ttcctgcaaa accgtatgtc cgaagtattc ggcgtggaca tccatcccgc cgcccgtttc
     2761 ggatacgggc tgatgctcga ccacgccacc ggctttgttg ccggcgaaac cgccgtgttg
     2821 ggcaacaata tttcgatttt gcacggcgta acgctcggcg gttcgggcaa agaaggcggc
     2881 gaccgccacc ctaaaatcgg cgacggcgtg atgatcggcg caaacgcctc gatattgggc
     2941 aatatccgca tcggcagcaa tgccaaaatc ggggcgggca gcgtcgtggt ttcagacgtg
     3001 ccgccgtcca tcacggttgt cggcgtaccc gccaaacccg tggcgcgatc gctcaaaaca
     3061 ccgtcggcgg atatggatca aaatatccag tttgccgaaa tcgactttat gatttgaata
     3121 tccgcaccaa tgccgtctga aacgccaaac gggcttcaga cgacattgcc cgcttcaagc
     3181 ctgcgccttg atatgccgcc gatgtcggca cttgccagtc ggacaaaatg ccttttattc
     3241 gatacacccg attcccacgc aaccggaaat atagtggatt aacaaaaatc aggacaaggc
     3301 gacgaagccg cagacagtac
//
LOCUS       DAWKJW010000184         3172 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.184, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000184 DAWKJW010000000
VERSION     DAWKJW010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3172)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3172)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3172
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.184"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            112..2880
                     /locus_tag="WJJ54_001797"
     CDS             112..2880
                     /locus_tag="WJJ54_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ7342622.1"
                     /translation="MKSSFRLKPICFYLMGVMLYHHSYAEDAGRAGSEAQIQVLEDVH
                     VKAKRVPKDKKVFTDARAVSTRQDIFKSSENLDNIVRSIPGAFTQQDKSSGIVSLNIR
                     GDSGFGRVNTMVDGITQTFYSTSTDAGRAGGSSQFGASVDSNFIAGLDVVKGSFSGSA
                     GINSLAGSANLRTLGVDDVVQGNNTYGLLLKGLTGTNSTKGNAMAAIGARKWLESGAS
                     VGVLYGHSRRSVAQNYRVGGGGQHIGNFGAEYLERRKQRYFVQEGGLKFNSNSGKWER
                     DFQRPYWKTKWYQKYNDPQELQKYIEGHDKSWRENLAPQYDITPIDPSSLKQQSAGNL
                     FKLEYDGVFNKYTAQFRDLNTKIGSRKIINRNYQFNYGLSLNPYTNLNLTAAYNSGRQ
                     KYPKGSKFTGWGLLKDFETYNNAKILDLNNTATFRLPRETELQTTLGFNYFHNEYGKN
                     RFPEELGLFFDGPDQDNGLYSYLGRFKGDKGLLPQKSTIVQPAGSQYFNTFYFDAALK
                     KDIYRLNYSTNTVGYRFGGEYTGYYSSEGEFKRAFGENSPTYREHCNPSCGLYEPVLK
                     KYGKKRANNHSVSISADFGDYFMPFASYSRTHRMPNIQEMYFSQIGDSGVHTALKPER
                     ANTWQFGFNTYKKGLLKQDDTLGLKLVGYRSRIDNYIHNVYGKWWDLNGDIPSWVSST
                     GLAYTIQHRNFKDKVHKHGFELELNYDYGRFFTNLSYAYQKSTQPTNFSDASESPNNA
                     SKEDQLKQGYGLSRVSALPRDYGRLEVGTRWLGNKLTLGGAMRYFGKSIRATAEERYI
                     DGTNGGNTSNVRQLGKRSIKQTETLARQPLIFDFYAAYEPKKNLIFRAEVKNLFDRRY
                     IDPLDAGNDAATQRYYSSFDPKDKDEEVTCNADKTLCNGKYGGTSKSVLTNFARGRTF
                     LMTMSYKF"
     gene            2910..3149
                     /locus_tag="WJJ54_001798"
     CDS             2910..3149
                     /locus_tag="WJJ54_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342623.1"
                     /translation="MPSESPSDGICFPKRIILPQAYANPFYRIGNSKKNPFHSHAGKP
                     VDFGYFWLFRVIYESSFPQKRESRHSMLRQFIEND"
BASE COUNT          898 a          790 c          768 g          716 t
ORIGIN      
        1 caattgaaat cttcagacgg tatatcgaat ttacactttt taatgtttat gccgcctaaa
       61 aaaatgctaa tatatttctt aattgtctga ctgtttattg ttgaggaaaa tatgaaatct
      121 tctttccggt tgaagccgat ttgtttttat cttatgggtg ttatgctata tcatcatagt
      181 tatgccgaag atgcagggcg cgcgggcagc gaggcgcaga tacaggtttt ggaagatgtg
      241 cacgtcaagg cgaagcgcgt accgaaagac aaaaaagtgt ttaccgatgc gcgtgccgta
      301 tcgacccgtc aggatatatt caaatccagc gaaaacctcg acaacatcgt acgcagcatc
      361 cccggtgcgt ttacacagca agataaaagc tcgggcattg tgtctttgaa tattcgcggc
      421 gacagcgggt tcgggcgggt caatacgatg gtggacggca tcacgcagac cttttattcg
      481 acttctaccg atgcgggcag ggcaggcggt tcatctcaat tcggtgcatc tgtcgacagc
      541 aattttattg ccggactgga tgtcgtcaaa ggcagcttca gcggctcggc aggcatcaac
      601 agccttgccg gttcggcgaa tctgcggact ttaggcgtgg atgacgtcgt tcagggcaat
      661 aatacctacg gcctgctgct aaaaggtctg accggcacca attcaaccaa aggtaatgcg
      721 atggcggcga taggtgcgcg caaatggctg gaaagcggag catctgtcgg tgtgctttac
      781 gggcacagca ggcgcagcgt ggcgcaaaat taccgcgtgg gcggcggcgg gcagcacatc
      841 ggaaattttg gcgcggaata tctggaacgg cgcaagcagc gatattttgt acaagaaggc
      901 gggttgaaat tcaattccaa cagcggaaaa tgggagcggg atttccaaag gccgtactgg
      961 aaaaccaagt ggtatcaaaa atacaatgac ccccaagaac tgcaaaaata catcgaaggt
     1021 catgacaaaa gctggcggga aaacctggcg ccgcaatacg acatcacccc catcgatccg
     1081 tccagcctga agcagcagtc ggcaggtaat ctgtttaaat tggaatacga cggcgtattc
     1141 aataaataca cggcgcaatt tcgcgattta aacaccaaaa tcggcagccg caaaatcatc
     1201 aaccgcaatt atcaattcaa ttacggtttg tctttgaacc cgtataccaa cctcaatctg
     1261 accgcagcct acaattcggg caggcagaaa tatccgaaag ggtcgaagtt tacaggctgg
     1321 gggcttttaa aggattttga aacctacaac aacgcaaaaa tcctcgacct caacaacacc
     1381 gccaccttcc ggctgccccg cgaaaccgag ttgcaaacca ctttgggctt caattatttc
     1441 cacaacgaat acggcaaaaa ccgctttcct gaagaattgg ggctgttttt cgacggtcct
     1501 gatcaggaca acgggcttta ttcctatttg gggcggttta agggcgataa agggctgctg
     1561 ccccaaaaat caaccattgt ccaaccggcc ggcagccaat atttcaacac gttctacttc
     1621 gatgccgcgc tcaaaaaaga catttaccgc ttaaactaca gcaccaatac cgtcggctac
     1681 cgtttcggcg gcgaatatac gggctattac agctcggaag gcgaatttaa gcgggcattc
     1741 ggagaaaact cgccgacata cagggaacat tgcaacccga gctgcgggct ttatgaaccc
     1801 gtattgaaaa aatacggcaa aaagcgcgcc aacaaccatt cggtcagcat tagtgcggac
     1861 ttcggcgatt atttcatgcc gttcgccagc tattcgcgca cacaccgtat gcccaacatc
     1921 caagaaatgt atttttccca aatcggcgac tccggcgttc acaccgcctt aaaaccagag
     1981 cgcgcaaaca cttggcaatt tggcttcaat acctataaaa aaggactgtt aaaacaagat
     2041 gatacattag gattaaaact ggtcggctac cgcagccgca tcgacaacta catccacaac
     2101 gtttacggga aatggtggga tttgaacggg gatattccga gctgggtcag cagcaccggg
     2161 cttgcctaca ccatccaaca tcgcaatttc aaagacaaag tgcacaaaca cggttttgag
     2221 ttggagctga attacgatta tgggcgtttt ttcaccaacc tttcttacgc ctatcaaaaa
     2281 agcacgcaac cgaccaactt cagcgatgcg agcgaatcgc ccaacaatgc gtccaaagaa
     2341 gaccaactca aacaaggtta tgggttgagc agggtttccg ccctgccgcg agattacgga
     2401 cgtttggaag tcggtacgcg ctggttgggc aacaaactga ctttgggcgg cgcgatgcgc
     2461 tatttcggca agagcatccg cgcgacggct gaagaacgct atatcgacgg caccaacggg
     2521 ggaaatacca gcaatgtccg gcaactgggc aagcgttcca tcaaacaaac cgaaaccctt
     2581 gcccgccagc ctttgatttt tgatttttac gccgcttacg agccgaagaa aaaccttatt
     2641 ttccgcgccg aagtcaaaaa tctgttcgac aggcgttata tcgatccgct cgatgcgggc
     2701 aatgatgcgg caacgcagcg ttattacagt tcgttcgacc cgaaagacaa ggacgaagaa
     2761 gtaacgtgta atgctgataa aacgttgtgc aacggcaaat acggcggcac aagcaaaagc
     2821 gtattgacca attttgcacg cggacgcacc tttttgatga cgatgagcta caagttttaa
     2881 aggcagcccg cgttttgtag aaaaccgcaa tgccgtctga aagcccttca gacggcattt
     2941 gtttccccaa acgcatcatc ctgccgcaag cctatgccaa tccgttttat cgcatcggca
     3001 actcaaagaa aaatccattt cattcccacg cagggaagcc ggttgatttc ggttattttt
     3061 ggttgtttcg ggtaatttat gagtcgtcat tcccgcaaaa gcgggaatct agacattcaa
     3121 tgctaaggca atttatcgaa aatgactgaa actcaaaaaa ctggattccc ac
//
LOCUS       DAWKJW010000185         3112 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.185, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000185 DAWKJW010000000
VERSION     DAWKJW010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3112
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.185"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            272..895
                     /locus_tag="WJJ54_001799"
     CDS             272..895
                     /locus_tag="WJJ54_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEZ7342624.1"
                     /translation="MKKPTDTLPVNLQRRRLLCAAGALLLSPLAHAGAQREETLADDV
                     ASVMRSSVGSVNPPRLVFDNPKEGERWLSAMSARLARFVPEEEERRRLLVNIQYESSR
                     AGLDTQIVLGLIEVESAFRQYAISGVGARGLMQVMPFWKNYIGKPAHNLFDIRTNLRY
                     GCTILRHYRNLEKGNIVRALARFNGSLGSNKYPNAVLGAWRNRWQWR"
     gene            1006..2388
                     /locus_tag="WJJ54_001800"
     CDS             1006..2388
                     /locus_tag="WJJ54_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ7342625.1"
                     /translation="MARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAVYAAS
                     LPGAEGNKTLVGLAMGIYGLTQALLQLPLGIASDKFGRKKTIYAGLVVFAAGSFLAAA
                     ADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVA
                     PVIADAVGVRGLFMLTGILTVISIGVVAWMTPDPEVSKLHEDTQAQPSRIGEVLKNRR
                     LLTLDFGIFALHAAQMALFTALPFAMTQLGLEKIQHWKVYLPSTITGLVVMVPLIIVG
                     ETRNKLKQVFVLGIVCIAAAQLGLLSGMRSVGLITAYLVVYFIGFNVLEASLPSMVSK
                     IAPSDLKGTAMGVYNTMQSLGLFAGGAAGGLLFQKYGFSGVFAFCSILMLLWLVIAVL
                     SPAPKPVKNLSYPVGGVWQGNQEGLYRALSELEGVEDIGFSFDGQTVYLKVLQKGFDQ
                     AAAEKIITGV"
     gene            2392..2916
                     /locus_tag="WJJ54_001801"
     CDS             2392..2916
                     /locus_tag="WJJ54_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEZ7342626.1"
                     /translation="MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQ
                     RVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANE
                     MKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
                     AAAPVEDIDDDIPF"
BASE COUNT          629 a          841 c          936 g          706 t
ORIGIN      
        1 cctgctgccg cccgaaaagc gtgatgcgct gatggtgctg ctgcataatc cggacgacgg
       61 ataaccggtg aaaacggaaa atgcccgggt ggtgttgcct gtgcctgttt ggacaagcgt
      121 tcttgagggc ggtaaaatca aggtttgccc gaaaagggca gggcgatatg ccgcgcttgg
      181 attttgtgcg cggtttttcg cgttggaagc aatcattgtc tgtttgaata tttaatgccg
      241 tctgaaacgt ccggacgcgc ccccgttccc tatgaaaaaa ccgaccgata ccctacccgt
      301 taatctgcaa cgccgccgcc tgttgtgtgc cgccggtgcg ttgttgctca gtcctctggc
      361 gcacgccggc gcgcaacgtg aggaaacgct tgccgacgat gtggcttccg tgatgaggag
      421 ttctgtcggc agcgtcaatc cgccgaggct ggtgtttgac aatccgaaag agggcgaacg
      481 ttggttgtct gccatgtcgg cacgtttggc aaggttcgtc cccgaggagg aggagcggcg
      541 caggctgctg gtcaatatcc agtacgaaag cagccgggcc ggtttggata cgcagattgt
      601 gttggggctg attgaggtgg aaagcgcgtt ccgccagtat gcaatcagcg gtgtcggcgc
      661 gcgcggcctg atgcaggtta tgccgttttg gaaaaactac atcggcaaac cggcgcacaa
      721 cctgttcgac atccgcacca acctgcgtta cggctgtacc atcctgcgcc attaccggaa
      781 tcttgaaaaa ggcaacatcg tccgcgcgct tgcccgcttt aacggcagct tgggcagcaa
      841 taaatatccg aacgccgttt tgggcgcgtg gcgcaaccgc tggcagtggc gttgattttg
      901 aacccgcgcc gcaaccgaaa tacggcgaat cctgtataat ccgaaaatct gttcactgga
      961 agttcagacg gcattgcaac tgttaatgcc gtctgaaaaa atatgatggc aagagacaac
     1021 cgcatccaaa tgtttccgca cgaatggcgc gccagtacga cgctttccgg cgtgtacgcg
     1081 ctgcgtatgc tgggtatgtt cctcgtgctg cccgtattgg cggtgtatgc cgcctcgctg
     1141 cccggcgcgg aaggcaacaa aacgctggtc gggctggcaa tgggcattta cgggctgaca
     1201 caggctctgc tgcaactgcc tttgggcatc gcttccgaca agttcgggcg caagaaaacc
     1261 atttatgcgg gactggtcgt gtttgcggcg ggcagctttc ttgccgccgc cgccgatacg
     1321 ctgcccatgc tggtcgccgc acgcgccata cagggtgcag gggcggtcag tgcggcggtt
     1381 accgcgctgc tggcggattt gacgcgcgac ggcgtacgta cccgcgcaat ggcgatgatc
     1441 ggtttgagta tcggtttgac gttttcggtc agcctcgtcg ttgcccccgt gattgccgac
     1501 gcggtcggcg ttcgcggact gtttatgctg accggcattc tgaccgtcat cagcatcggc
     1561 gtggtggcgt ggatgactcc cgatcccgaa gtttccaagc tgcacgaaga tacgcaggcg
     1621 cagccttcgc gcataggcga agttttgaaa aaccgtaggc tgctgacgct tgatttcggc
     1681 attttcgccc tgcacgccgc acaaatggca ttgtttaccg cgctgccttt cgcgatgacc
     1741 cagctcggtt tggaaaaaat acagcattgg aaagtctatc tgccttcgac cattacgggc
     1801 ttggtggtga tggttccgct gattatcgtc ggcgagacgc gcaacaagct taagcaggtt
     1861 tttgttttgg gtatcgtctg tattgcggcg gcgcagctcg gtttgctgtc cggtatgcgc
     1921 tcggtaggct tgattaccgc ttatttggtt gtttacttta tcggttttaa tgtgttggaa
     1981 gcgagcctgc cgtctatggt ttccaaaatc gcgccgtccg acctgaaggg tacggcgatg
     2041 ggcgtgtaca acacgatgca gtcgctcgga ctgtttgccg gcggcgcggc aggcggtttg
     2101 ctgtttcaaa aatacggctt ttccggcgtg tttgcctttt gcagtatatt gatgctgctg
     2161 tggctggtaa ttgccgtttt atcgcctgcg cccaagcccg tcaaaaacct cagttaccct
     2221 gtcggcggcg tgtggcaggg caatcaggaa gggttatacc gcgccttgtc ggagcttgag
     2281 ggtgtggaag acatcggttt cagtttcgac gggcagaccg tctatctcaa agtgttgcag
     2341 aagggtttcg atcaggctgc cgctgaaaaa atcatcacag gagtttaaaa aatgtcattg
     2401 aacaaagtca tcctcatcgg ccgcctcgga cgcgatcccg aagtgcgcta tatgcccaac
     2461 ggcgaggcgg tttgtaattt cagcgtcgcc accagcgaaa cttggaacga ccgcaacggc
     2521 caacgtgtag agcgtactga gtggcacaac atcaccatgt accgcaaact ggcggaaatt
     2581 gccgggcaat acctcaaaaa aggcgggctg gtttatctgg aaggcagaat ccaaagccgc
     2641 aaataccaag gcaaagacgg catcgaacgc accgcttacg atattgtcgc caacgaaatg
     2701 aaaatgttgg gcgggcgcaa tgaaaacagc ggcggtgcgc cttacgagga aggttacggt
     2761 cagagtcagg aggcttacca acgccccgcg cagcaaagcc ggcagcccgc ctccgacgcg
     2821 ccgtcccatc cccaagaagc accagccgcg ccgcgccgcc aacccgtgcc tgccgccgcc
     2881 ccggtcgagg acattgacga cgatatcccg ttctgaattt tacggccgga catcctcgcg
     2941 gagggaaatc ataaaggacg gagaaacctt aaaccttacg gggcagggtt tctctttttt
     3001 gcatttgggc cggcttgttg ccgccctttg cgttgggcgg aacgttgcga ttgcgccgtt
     3061 cgggcgtttt gaggcagtga tgcctgccgc acgtccccgc tgttttcaga cg
//
LOCUS       DAWKJW010000186         3100 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.186, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000186 DAWKJW010000000
VERSION     DAWKJW010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3100)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3100)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3100
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.186"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(278..709)
                     /locus_tag="WJJ54_001802"
     CDS             complement(278..709)
                     /locus_tag="WJJ54_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342627.1"
                     /translation="MKNNIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNI
                     TTTGHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKAPSIYFSVGDDFNPEELIIPIN
                     LAYHYFNIAISDFLIAHPEYQKKCKEIQKTYSQTSCSLHET"
     gene            complement(725..>3100)
                     /locus_tag="WJJ54_001803"
     CDS             complement(725..>3100)
                     /locus_tag="WJJ54_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ7342628.1"
                     /translation="IDIKSGGSIDAYATVFDAPKGSINIEAGRKLTLYAVEELNYDKL
                     DSHKKRKFLGITYDKVHDTSTQQMQTALPSRVVAESANLQSGWDTKLQGTQFETTLGG
                     AVIRAGVGDQARADAKIILEGIKSSIHTETVSSSKSALWQKQAGRGSNIETLQLPSFT
                     GPVAPVLSAPGGYIVDIPKGNLKTEIEKLAKQPEYAYLKQLQVAKNINWNQVQLAYDK
                     WDYKQEGLTGAGAAIIALAVTVVTSGAGTGAVLGLNGAAAAATDAAFASLASQASVSF
                     INNKGDVGKTLKELGRSSTVKNLVVAAATAGVADKIGASALNNVSDKQWINNLTVNLA
                     NAGSAALINTAVNGGSLKDNLEANILAALVNTAHGEAASKIKQLDQHYIVHKIAHAIA
                     GCAAAAANKGKCQDGAIGAAVGEIVGEALTNGKNPDTLTAKEREQILAYSKLVAGTVS
                     GVVGGDVNAAANAAEVAVKNNQLSDKEGREFDNEMTACAKQNNPQLCRKNTVKKYQNV
                     ADKRLAASIAICTDISRSTECRTIRKQHLIDSRSLHSSWEAGLIGKDDEWYKLFSKSY
                     TQADLALQSYHLNTAAKSWLQSGNTKPLSEWMSDQGYTLISGVNPRFIPIPRGFVKQN
                     TPITNVKYPEGISFDTNLKRHLANADGFSQKQGIKGAHNRTNFMAELNSRGGRVKSET
                     QTDIEGITRIKYEIPTLDRTGKPDGGFKEISSIKTVYNPKKFSDDKILQMAQNAASQG
                     YSKASKIAQNERTKSISERKNVIQFSETFDGIKFRSYFDVNTGRITNIHPE"
BASE COUNT          730 a          675 c          671 g         1024 t
ORIGIN      
        1 attttgccgt tttccgaact gatatccgtg gtgctgagca ggatgcgact gttctcattg
       61 gcatacggtg cgctaatgct cacaccggtt ttacccgaaa gttctgcagc aagcgtagga
      121 ggtgtcttca gcacgcacgc gtctgggcag tatataggga atctgaatat ttacttgcat
      181 aacaaatgcc gtctgaaaaa attgagcttt tcagacggca ttgagccgta aatcatggaa
      241 cgcgtgcgtg ctggagcaca caccttacgc atggatttta ggtttcatgc aggctacagc
      301 ttgtttgaga atatgttttt tgtatttctt tacacttttt ttgatattca gggtgagcta
      361 ttaagaaatc agatattgca atattaaagt aatgatatgc taaattaata ggtataatta
      421 attcttcagg attgaaatca tctccaactg aaaaataaat agaaggagct ttatcaatat
      481 actcaaatcc atttacctct tcataatctc caatccatct ggtagcatct attttttcat
      541 attgagcacc tattactcca aaatgtccgg tagttgtaat atttttaaaa cactctaaaa
      601 gcgtatcttt agtttcaaat tggtaaattg tttcaaaaaa aatcgaaata acaaaatggt
      661 tgttatttat agatttttta tttaagttta gaaaaatatt atttttcata atttttcctt
      721 taaattattc tgggtgaatg tttgtaattc ttcctgtatt tacatcaaaa tatgatctaa
      781 atttgattcc gtcaaaggtt tctgagaatt gaatgacatt ttttctttcc gatattgatt
      841 tagttctttc attttgagca attttagagg cttttgaata tccttgtgaa gcagcatttt
      901 gagccatttg aagtatttta tcatcagaaa attttttagg attataaaca gtttttatac
      961 ttgaaatttc cttaaatcca ccatcaggtt tacctgtcct gtctagtgta ggaatctcat
     1021 atttaattcg ggtaatgcct tcaatatcag tttgggtttc agattttacg cgtcctcctc
     1081 gtgaatttag ttctgccata aaattggtgc ggttatgggc tcctttaatg ccctgttttt
     1141 gactaaaacc atcagcattt gccagatgtc tttttaggtt tgtatcgaaa ctgatgcctt
     1201 ccgggtattt gacattagta ataggtgtat tttgttttac aaaccctctt ggtattggaa
     1261 tgaatctagg attaactcct gaaataagtg tataaccttg gtcggacatc cattcggata
     1321 aaggctttgt attgcccgat tgaagccaag atttagcagc agtattcaaa tgataagact
     1381 gtaaagccaa atctgcttgg gtgtaagatt tgctgaataa tttataccat tcatcatctt
     1441 taccaattag acctgcttcc caagatgaat gaaggcttct actatcgatc aaatgttgtt
     1501 ttctgattgt tctacattca gtactacggg atatatccgt acatattgca atcgaagcag
     1561 caagtctttt atcagcaaca ttttgatact tttttacagt attttttctg cacagttgag
     1621 gattattctg tttggcgcat gcagtcattt cgttatcaaa ttctctaccc tctttgtcgc
     1681 taagctgatt atttttcacc gctacctcag ccgcattcgc cgccgcattt acatcgccgc
     1741 cgaccacacc gcttaccgta ccggcaacca gtttgctgta tgccaaaatc tgttcgcgtt
     1801 ctttagctgt caaagtgtca ggatttttgc cgtttgtcaa agcctccccg actatctcgc
     1861 ccacagccgc acctatcgca ccatcctgac acttgccctt attcgccgcc gctgccgcac
     1921 agcccgctat ggcatgggca atcttgtgga ctatgtagtg ctgatccaac tgtttgattt
     1981 tactggctgc ttctccatgc gcggtattga ccaaagccgc aaggatattc gcttccagat
     2041 tgtctttcag gctgccgccg ttgacagcgg tattaatcag tgcggcactg cccgcattgg
     2101 ctaggttgac ggtcaggttg ttgatccact gcttatcgct gacattgttc agtgccgaag
     2161 cgccgatttt gtcggctacg cctgcggtag cggcggcaac caccagattt ttcaccgtgc
     2221 tgcttctgcc cagctctttc agggttttgc cgacatcgcc tttgttgttg atgaacgata
     2281 cggaagcctg gctggccaaa gaggcgaatg ctgcatcggt tgcggcggcg gccgcaccgt
     2341 ttaatcccaa tacggctccg gttcctgcgc ctgaggtgac cacggtaacg gccagtgcga
     2401 taatcgccgc acctgctccg gttaagccct cctgtttgta gtcccattta tcgtaagcaa
     2461 gctgcacctg attccagttg atgtttttcg ctacttgaag ttgtttcaaa taagcatact
     2521 cgggctgctt ggcgagtttt tcgatttcgg ttttcagatt gcctttcgga atgtcgacga
     2581 tgtagccgcc gggagcagag agtacgggcg caacggggcc ggtgaaactt ggcagttgca
     2641 gggtttcgat gttgctgccg cgtcctgcct gtttttgcca gagggcggat ttgctgctgc
     2701 ttacggtttc tgtgtggatg ctgcttttga tcccttcgag gataatcttg gcatcggccc
     2761 gtgcctggtc gcctacgcct gcacggatga ccgcgccgcc cagcgtggtt tcaaactgcg
     2821 taccttgtaa cttggtatcc caacctgatt gcagattagc tgattcagcc actacacggc
     2881 ttggtaaggc agtttgcatc tgttgggtag aggtatcatg taccttatca taagtaatgc
     2941 cgagaaattt gcgtttctta tgactgtcta gtttgtcgta gttgagctct tctacggcat
     3001 agagtgtcaa tttccgcccg gcttcgatgt taatgctgcc tttgggggca tcgaatacgg
     3061 tggcgtaggc gtcgatgctg ccaccagatt tgatgtcgat
//
LOCUS       DAWKJW010000187         3098 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.187, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000187 DAWKJW010000000
VERSION     DAWKJW010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3098)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3098)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3098
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.187"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(255..1769)
                     /gene="katA"
                     /locus_tag="WJJ54_001804"
     CDS             complement(255..1769)
                     /gene="katA"
                     /locus_tag="WJJ54_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase KatA"
                     /protein_id="HEZ7342629.1"
                     /translation="MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLAQDLWLNEK
                     LADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAG
                     ERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM
                     RSATNNWDFWTLLPEALHQVTIVMSDRGIPASYRHMHGFGSHTYSFWNEAGERFWVKF
                     HFRSQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKV
                     PYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDKM
                     LQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSF
                     GQWQQQPDFAEPPLKINGDAAHWDYRQDDDDYFSQPRALFNLMNDEQKQALFGNTAAA
                     MGDAPDFIKYRHIRNCHRCDPAYGEGVAKALGLTVEDAQAARATDPALGQPGLL"
     gene            2117..2968
                     /locus_tag="WJJ54_001805"
     CDS             2117..2968
                     /locus_tag="WJJ54_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HEZ7342630.1"
                     /translation="MTLLGIKLKQTQQLNQRLQQSLRVLQMSGIELEREVENWLSDNP
                     LLERKDTDEFSDARFSHYTAPARQIGGDEGEDMLSNIAGEQDFKQYLHAQVCEHPLSD
                     QEAACVHILIDFLDEQGYLTDSIEDILDHTPLEWMLDEAMLKQALTALQKFDPAGVAA
                     ADLNESLILQIERLGECAAKPAALHIVRNALDSIDGNRSQTLARIKKHLPQTDSGTLE
                     AALDLIASLNPFPAAGFASSTPTPYSDEALANLLAFRGMEVSRRTIAKYRESLEIPAA
                     HKRKTAE"
BASE COUNT          689 a          796 c          868 g          745 t
ORIGIN      
        1 ggaaaagttt tcgtgccggt ttgaaccggt ggggatggtg cgggaatgac ggcggaaaag
       61 tgggctgtgg ggcgggaatg acgggatatt ttgcgtttaa taaaaaacgc ccactgaaac
      121 ggcgggggtg gggtgtggaa atgccgtctg aagcggtcaa acgacgtttc agacggcatt
      181 tttatgcccg gttatttccg gtagcggacg gcgcgggaca ggatttcttc aatttccatc
      241 cacataatgc ccccttacag caaaccgggc tggccgagtg cggggtcggt cgcgcgggcg
      301 gcttgtgcgt cttcgacagt cagtccgagg gcttttgcca cgccttcgcc gtatgccggg
      361 tcgcaacggt ggcagttgcg gatatggcgg tatttgatga agtcgggcgc atcgcccatg
      421 gctgcggcgg tgttgccgaa caaagcctgt ttctgctcat cgttcatcag gttgaacagg
      481 gcgcgcggtt ggctgaaata gtcgtcatcg tcttggcggt agtcccagtg cgccgcgtcg
      541 ccgttgattt tcaaaggcgg ttcggcgaag tcgggttgtt gctgccattg gccgaagctg
      601 ttgggttcgt agtgcggcag gctgccgtag ttaccgtcgg cgcggccttg gccgtcgcgc
      661 tggttgctgt gaacagggca acgcggacgg ttgacgggga tttggcggaa gttcacgccc
      721 aaacggtagc gttgcgcatc ggcgtaattg aacaaacggg cttgcagcat tttatctggg
      781 ctcgcgccga taccgggaac gaggttgctc ggtgcgaagg cggattgttc cacatcggcg
      841 aagaagtttt cgggattgcg gttcaactcg aattcgccca cttcaatcag cggatagtct
      901 tttttcggcc aaactttggt caaatcaaac ggatgatagg gtactttttc cgcatcggct
      961 tcaggcatga cttggatgta catcgtccat ttcggaaact cgccgcgctc gatggcttcg
     1021 tacaggtcgc gttgatggct ttcgcggtcg tcggcgatga ttttggcggc ttcttcgttg
     1081 gtcaggtttt taatgccttg ctggctgcgg aaatgaaatt tcacccagaa acgctcgcct
     1141 gcttcgttcc agaagctgta agtatgcgaa ccgaagccgt gcatatggcg gtagctggcg
     1201 ggaataccgc ggtcgctcat cacgatggta acttggtgca acgcttcagg cagcagcgtc
     1261 cagaagtccc agttgtttgt ggcggaacgc atattggtgc gcggatcgcg tttgacggct
     1321 ttgttcaggt cagggaattt acgcgggtcg cgcaggaaga acacgggcgt gttgttgccg
     1381 accacatccc agttgccttc ttcggtataa aatttcaagg caaaaccgcg gatgtcgcgt
     1441 tctgcatcgg ctgcgccgcg ttcgcctgcc acggtggtga aacgggcgaa catctcggtt
     1501 tttttgccga cttcgctgaa gattttggcg cgggtgtatt tggtgatgtc gtgcgttacg
     1561 gtaaacgtac cgaacgcgcc cgaacctttg gcgtgcatac ggcgttcggg gatgacttcg
     1621 cgcacgaagt cggcgagttt ttcattcagc cacaaatcct gcgccagcag agggccgcga
     1681 ggaccggcgg tcaggctgtt ttgattgtcg gcaacaggcg cgccgttgtt catggtcaga
     1741 tgggttacag ggcatttgga ggtagtcatc gctcttgttc cttttctcag gttggtcaaa
     1801 tgggggtaaa cggcttacag tacgatttgg cggaaagcgt attcgtaacc ggtttcttga
     1861 ttgcaataaa tttcttgaat cgacatttta tttccctttt gtaaaaacta tggatgcgac
     1921 tatacgccaa gattttcgct attaaaacta tgaaatcgat ttaatattat tataagcaat
     1981 cggtttttga ttttcgtttg ttttttgtta tcagaaagaa tccgaacccg ctcattaaaa
     2041 ccatttataa tgcaatgacg ctttgcggca ttttttgcgc cgacaggctg aaaataacaa
     2101 ttttccccac attatcatga ccttactcgg aataaagctc aaacagaccc agcagctcaa
     2161 ccagcggctg caacaatctt tgcgcgtatt gcagatgtcg ggtatcgaac ttgaacgcga
     2221 ggtcgaaaac tggctgtcgg acaatcccct gctcgaacgc aaagacacgg atgaattttc
     2281 cgatgctagg ttttcccatt acaccgcgcc tgcccgtcaa atcggcggag acgaaggcga
     2341 agatatgctg tccaacatcg ccggtgagca ggatttcaag caatacctgc acgcgcaagt
     2401 atgcgaacac ccgctttccg accaagaagc cgcctgtgtc cacatcctta tcgatttcct
     2461 tgacgagcag ggttatctga ccgacagcat cgaagacatc ctcgaccata cgcccttgga
     2521 gtggatgttg gatgaagcaa tgctgaaaca agccctgact gcattgcaaa aattcgaccc
     2581 ggcaggcgtg gccgccgccg atttgaacga atcgctgata ctgcagatag aaagattggg
     2641 cgaatgtgct gccaaacccg ccgccctgca tatcgtccga aacgccctcg acagcattga
     2701 cggcaaccgc agccaaaccc tcgcacgaat aaaaaaacac ctgccccaaa ccgacagcgg
     2761 cacactcgaa gccgcactcg acctcattgc ttcgctcaat ccctttcccg ccgccggttt
     2821 tgcctcgtcc acacccacgc cgtattctga cgaggcactc gccaacctgc tggctttccg
     2881 cggcatggag gtttctcgcc gcaccattgc caaatacaga gaatcccttg agattccggc
     2941 agcacacaaa cgcaaaaccg cagaataatt gctgaataat cttataaaga caacaaacca
     3001 aaagccggca tttctgcgaa agcgggaatg ccgaatccgt ccgcgcggaa acctgcatcc
     3061 cgtcattccc gcgaaagagg gaatctagaa acgcaaag
//
LOCUS       DAWKJW010000188         3084 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.188, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000188 DAWKJW010000000
VERSION     DAWKJW010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3084)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3084)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3084
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.188"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            65..490
                     /locus_tag="WJJ54_001806"
                     /pseudo
     CDS             65..490
                     /locus_tag="WJJ54_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701621.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NosR"
     gene            496..1725
                     /locus_tag="WJJ54_001807"
                     /pseudo
     CDS             496..1725
                     /locus_tag="WJJ54_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777561.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
     gene            1783..2403
                     /locus_tag="WJJ54_001808"
                     /pseudo
     CDS             1783..2403
                     /locus_tag="WJJ54_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231945.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            2414..2545
                     /locus_tag="WJJ54_001809"
                     /pseudo
     CDS             2414..2545
                     /locus_tag="WJJ54_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688339.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            2542..3036
                     /locus_tag="WJJ54_001810"
     CDS             2542..3036
                     /locus_tag="WJJ54_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HEZ7342631.1"
                     /translation="MKKTLLAIIAVFALSACRQAEEGPPPLPQQISDRSVGHYCSMNL
                     TEHNGPKAQIFLNGKPDQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNP
                     NADTEWMDAKKAFYVIDSGFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVSFDDMPDT
                     YIFK"
BASE COUNT          777 a          828 c          811 g          668 t
ORIGIN      
        1 tatcccgtat gcggattggt tttaagattt gtaaatttga tttgcatcaa aaaatcgccg
       61 atagatgatt catataatat caatattaaa gagtatcggt atatcgggga tagtcatgtc
      121 ctgtttttca atcaaacgta tgtccgcgtt tcgggcgcgg ataacggcgt tttttgccgc
      181 ctttgtcttt ttgacggcgg cactgcccgc ttatgcggag cgtctgcctg attttctggc
      241 gaaaatacag ccttcggaaa tttttccggg tgcggaccgt tacagcaagc cggaaggtaa
      301 gcctatggtt gcccgcgttt acaaaggcga tgagcagttg ggcttggtct atatcacgac
      361 cgatgcggtc aatacgcgcg gttattcgag caaaccgatc gatacgctga tggctttggc
      421 aaatgacggc acgatagccg gagcgaaact ggtcgatcat cacgaaccga ttatgctgat
      481 cggtatcccg catttgcccg cgcccgggcg ggcgatacgc tcaaactggc ttccggcgta
      541 tatcaaacca aactttatat cgacaaaccg attacgattg aagggcctgc cgaccgttcc
      601 gcaaccatcg aaggagacag gagcgggcgt accatagccg tacacgcgcc ggacgtaacg
      661 ctccgcaacc tgaccgttac ccgttccggt atgagcctgc ctgcaatgga tgccggtatt
      721 tatctcgaag aaaccgcccc gcgcgccctg atcgaacaca acaatatttt ggataattcg
      781 gtcggcgtat atctgcatgg ttctgccgat gcgatggtgc gggagaataa aatcgtcggc
      841 gacgcgactt tgcgcgtgaa cgagcgcggc aatggcgtta ccgtttggaa cgcgcccggc
      901 gcgcaggtcg tcggcaacga tatttccaaa gggcgggacg gcattttttc caataccagc
      961 acgcacaaca cctataaaaa caaccgcttc agcgatttgc gtttcgccgt ccactatatg
     1021 tacaccaacg acagcgaaat cagcggcaat atttccgtgg gcaacaatat gggctatgtg
     1081 ctgatgtttt ccgagcggct caaagtgttt gacaatatcg ccgtcggcag ccgcgaccaa
     1141 ggcatcatgc tcaactatgt caactattcc gatattcacg acaacattat caacaaagcg
     1201 ggcaagtgcg tttttgccta caatgccaac tacgataaac tgtccgccaa tcattttgaa
     1261 aactgccaaa tcggcataca ctttaccgcc gccatcgaag gcacgtcact gcacgacaat
     1321 tcctttatca acaacgaaag ccaggtcaaa tacgtcagca cgcgctttct cgactggagc
     1381 gagggcggac acggcaacta ttggagcgac aacagcgcgt tcgatttgaa cggcgacggc
     1441 ttcggcgaca gcgcgtaccg gcccaacggc atcatcgacc aaatcatctg gcgcgcgccc
     1501 gtatcgcgtc tcttgatgaa cagtcccgca atcagcatcg tcaaatgggc gcaggcgcag
     1561 tttcccgccg ttctgcctgg cggcgtggtg gacagcaaac cgctgatgaa gccttatgcc
     1621 cccaaaattc aaacccgtta tcaggcgatg aaggacgagc tactcaaaga agtcgaaacg
     1681 cggcagtcgg aatggggcag ggcggaaaac ggttctttga actagtctgc ttcagacggc
     1741 atccggattc aaatgccgtc tgaaaacaca aaaggaacaa ccatgaccac acatcatgtc
     1801 gaattgagga aggtaaccaa acggttcggg gcgcaaaaag ccgtcaacca agtcgatttg
     1861 gttttgaagg caggagaaag cgtcgggctt gccggacaca acggcgcggg caagtccacc
     1921 attatgaagc tgatactcgg gctgattacc ccgaccgaag gcgaagtgat gcttttgggc
     1981 gaacgtaccg gtagcaaagc gggggcgcgg cttcgcagcc aaatcggcta cctgcccgaa
     2041 accgttgcgc tgcacccttc gctgatcggc atcgaaacgc tggattttta tgccaaactt
     2101 aaaaaacagc cgctcacgca gaaccggggg ctgcttgagc gcgtcggcat ttcacaggcg
     2161 gcacaccgcc gcgtcggcac ttattctaaa gggatgcgcc aacgccttgc cttggcacaa
     2221 gccctgctgg gcgagcccaa agtcctgctg tttgacgaac cgacaaccgg cctcgaccct
     2281 gcataacgac aaatgtttta cgaagtcgtg cgcgaactca acgggcgcgg cgcgaccgta
     2341 ttgctcagca cccacgccct tgccgagttg gacgggcacg ccgaccgcat tatcgtggat
     2401 taaatttaat ccactatatg cgggtatggc gggtttgagc ggacaaatca gcctgaccgt
     2461 ccccgttttg ctgaccgcgc aggttttatg ggttatcatt ccgcttgttt tggcagccgg
     2521 aatttttaga aagcgacaaa tatgaagaaa accctgttgg caattattgc cgttttcgcc
     2581 ttaagtgcct gccggcaggc ggaagagggg ccgccgcctt taccccagca gattagcgac
     2641 cgttcggtcg gacactattg cagtatgaac ctgaccgaac acaacggccc caaagcccag
     2701 attttcttga acggcaaacc cgatcagccc gtttggttct ccaccatcaa gcagatgttc
     2761 ggctatacca agctgcccga agagcctaaa ggcatccgcg tgatttacgt taccgatatg
     2821 ggcaatgtta ccgattggac gaatcccaat gccgacacgg agtggatgga tgcgaaaaaa
     2881 gccttttacg tcatcgacag cggctttatc ggcggtatgg gtgcggaaga cgcgctaccg
     2941 ttcggcaaca aggagcaggc tgaaaaattt gcaaaggata aaggcggtaa ggttgtcagt
     3001 ttcgacgata tgcctgatac ctatattttc aaataaatcc aaacaaaaat accgtctgaa
     3061 cgttgaagcc aaggttcaga cggc
//
LOCUS       DAWKJW010000189         2940 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.189, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000189 DAWKJW010000000
VERSION     DAWKJW010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2940)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2940)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2940
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.189"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(127..1437)
                     /locus_tag="WJJ54_001811"
     CDS             complement(127..1437)
                     /locus_tag="WJJ54_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEZ7342632.1"
                     /translation="MTDLFAREPDAPLAERLRPHTLDDVVGQEHLIGEGKPLRVAVEG
                     GKPHSMLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIREAIDKAEIALQQG
                     RATILFVDEVHRFNKAQQDAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQ
                     PLSSDGLKKLVAKVLALPEYRDFTIEADAQELFVNTADGDARRLLNLLEQLLRAADTR
                     RLKNLTAEFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGG
                     TDPRYLARRIVRIAWEDIGLADPRAFQIANDAAATFERLGSPEGELALAQAVLYLAAA
                     AKSNAGYKAYNQMRHFVKENASDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYAA
                     GESYMPDGLDEPDFYQPVPRGLEIKIGEKLEWLKSLDEEALKAK"
     gene            1749..2132
                     /locus_tag="WJJ54_001812"
     CDS             1749..2132
                     /locus_tag="WJJ54_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342633.1"
                     /translation="MEWVSLFSDPQKDDDSLITLKDEKITVKNYIVPWWKKGENFRKL
                     ELITTGKNDNGNLTVNGIYGIQSFADPQLGYTPELSVKSNNDILFKNNLQSIDVKPHS
                     GNIHLDAKGKIQFNLKFPMLMGYKM"
     gene            2256..2940
                     /locus_tag="WJJ54_001813"
                     /pseudo
     CDS             2256..2940
                     /locus_tag="WJJ54_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244588.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter"
BASE COUNT          811 a          722 c          707 g          700 t
ORIGIN      
        1 ttaatccact ataccacgtt gtctttattg gctttatcaa taaacaggat aagacctgaa
       61 aaaaagccga tacgcctttt tggtgtaccg gctttgccat accgttctgc ttcagacggc
      121 attgcttcat tttgccttta atgcctcttc atccagcgat ttcaaccatt ccagcttttc
      181 gccgattttg atttccaacc cgcgcgggac gggttggtag aagtccggtt cgtccaagcc
      241 gtcgggcata tagctttcgc cggcggcgta ggcgttcggt tcgtcgtggg cgtagcggta
      301 ttcgcgtccg tagcccaatt ccttcatcag cttggtcggg gcgttgcgca ggtggacggg
      361 cacttcgtcg ctagcgtttt ctttgacgaa gtggcgcatt tggttgtatg ccttgtagcc
      421 cgcgttggat ttcgcggcgg cggcaagata caataccgct tgcgccaaag ccagttcgcc
      481 ttcgggcgag cctaagcgtt cgaaggtggc ggcggcatcg ttggcgattt ggaaggcgcg
      541 cgggtcggca agcccgatgt cttcccaagc gatacgcacg atgcggcggg cgaggtagcg
      601 cgggtcggtg ccgccgtcga gcatacggca gaaccaatac agcgcggcgt tcggatgcga
      661 accgcgcacg gatttgtgca gggcggagat ttggttgtag aaactctcgc cgcctttgtc
      721 gaaacggcgg atttgcgccc cgagactgtc ggcgagaaat tcggcggtta agtttttcag
      781 acgacgtgta tcggcggcgc gtaaaagttg ttccaacaaa ttcaacaatc tgcgcgcatc
      841 accgtcggcg gtattgacga acagctcctg cgcgtcggct tcaatcgtga aatcccggta
      901 ttcgggcaaa gccaaaactt tggcaaccag ctttttgagg ccgtctgaag acaagggctg
      961 caaaacatac acctgcgcgc ggctcaacag cgcgggattg acttcaaacg acggattttc
     1021 cgtcgtcgca ccaataaagg ttagcaaacc gctttcgaca tgcggcaaaa acgcgtcctg
     1081 ctgcgccttg ttgaagcggt ggacttcatc gacaaacaaa atcgtcgcgc gtccctgctg
     1141 caaagcgatt tcggctttat cgattgcctc gcggatgtcc ttcacgccgg aaaacacggc
     1201 ggaaacaggc aaaaactggg cattgaaact ctgcgccaaa atccgcgcca acgtcgtctt
     1261 gcccacgccc ggcggccccc acagcaacat agaatgcggc ttgccgcctt ctaccgccac
     1321 gcgcaaaggt ttaccttcgc cgatgaggtg ttcctgcccc accacgtcgt caagcgtatg
     1381 cggacgcaat cgttcggcaa gcggcgcgtc gggttctcgg gcaaacaaat cggtcataac
     1441 ggctccgtca acaggttttc aaacaatatg attatacggc agggaacggc ggcgtgccgc
     1501 atacggattc cgcccctccg tttgccttaa gccgatatta ggcgcatact ggaaaagacg
     1561 agagacttca cacaatatat ccggcacgga gaccgattcc gcaccggcat gacaataccc
     1621 aaatcagcgt ttcaattaaa cattaaggag actaaaatag aaaatttgct ttatctacca
     1681 ttgctttgtt gattcaatcg gcattatgtt ttgaggcgga agcccatgaa tatactaata
     1741 ttcaagagat ggaatgggtg tctttatttt ctgatccgca aaaagacgat gatagtctta
     1801 taacccttaa agatgaaaaa atcactgtaa aaaactatat tgtgccttgg tggaaaaaag
     1861 gtgaaaactt tagaaaatta gaacttatta ccactggtaa aaatgataat ggaaatttaa
     1921 cggtaaatgg aatttacggc atccaatctt ttgcagaccc gcaattagga tatacgcctg
     1981 aattatcggt gaaaagcaat aatgatattc tatttaaaaa taatctccaa tctattgacg
     2041 tgaagcccca ttccggaaat atccatttgg atgccaaagg aaaaattcaa tttaatttga
     2101 agttcccgat gttgatgggg tacaagatgt agccagtgga aaaaaatacc gacaaacaat
     2161 agtgccttag tgcggtatgt caacactatc agccccccga tgaaaatgac aaaggcagca
     2221 tatcctttca ttcaaaaaca ggcaatttgt tcaatatgaa cgttaacgtt cataaagaca
     2281 cacaccattt cggtattcac aacctcaaca ataccgatgt tcatctgact gccgaagaca
     2341 gcgataatgt gattgagatt aaaggggaac tcgccgaccc tatgccgaca ggaaatgttg
     2401 agagtacaag ttttttaagg ggcattgaaa cggcttttaa atccaatacc gtattaacgg
     2461 ggaataacaa taaaatatcc atcgccactg agggcaaggg cttgggattg ggcgtaaatg
     2521 gtctccagtc caactccccc tattccggac acacgacggg cattttcatc aataatcaat
     2581 caagcgacct tacccaacct tcccttgatg gcatcagcac catcaaactc aaagccgtca
     2641 agggaaataa tgaagttgat ttaaatgtaa aaaaccacgc ctccgtaaaa ggcattatcg
     2701 cgtcgcattc tgcaaaagca acgcttgaag ccgaagggga caatattgtc caggttaaaa
     2761 atccggacac caatacggct ttaatcgatg ctttgaaaaa acaatacccc aatgcttcga
     2821 aagaactata cagggtgggg gttcaatcca cgactggaac agtacgcatt tcgccaaacg
     2881 gcaaaatcgc attaacggaa ttgaaaactt ttggaattgt acaaaacggc atttgcgtca
//
LOCUS       DAWKJW010000190         2847 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.190, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000190 DAWKJW010000000
VERSION     DAWKJW010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2847)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2847)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2847
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.190"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(39..515)
                     /gene="greA"
                     /locus_tag="WJJ54_001814"
     CDS             complement(39..515)
                     /gene="greA"
                     /locus_tag="WJJ54_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEZ7342634.1"
                     /translation="MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSE
                     NAEYEAAKERQGFIEGRISELEHKLSVAHIINPTEIHAEGKIVFGTTVTLEDLETEEH
                     VTYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREYDIIEVRYI"
     gene            907..2208
                     /gene="aroA"
                     /locus_tag="WJJ54_001815"
     CDS             907..2208
                     /gene="aroA"
                     /locus_tag="WJJ54_001815"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEZ7342635.1"
                     /translation="MTESVRLPAASLKLSTVALPGSKSISNRTLLLAALSDNACEIHS
                     LLKSDDTDRMLEALDKLGVQIEYLAEDRLKVHGTGGRFPNRTADLFLGNAGTAFRPLT
                     AALAVLGGDYHLHGVPRMHERPIGDLVDALRIAGTDVEYLGNEHYPPLHIGERQDNGE
                     HVIPIKGNVSSQFLTALLMALPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVAN
                     EDYRVFKIPADAHYHAPEHLHVEGDASSASYFLAAGLIAATPVRVTGIGANSIQGDVA
                     FARELEKIGADVVWGENFVEVSRPKERAVQAFDLDANHIPDAAMTLAIVALATGQTCT
                     LRNIGSWRVKETDRIAAMANELRKLGAKVAEEAEAIHITPPETPTPDAVIDTYDDHRM
                     AMCFSLVSLLGVPVVINDPKCTHKTFPTYFDVFSSLTETAE"
     gene            complement(2251..2784)
                     /locus_tag="WJJ54_001816"
     CDS             complement(2251..2784)
                     /locus_tag="WJJ54_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEZ7342636.1"
                     /translation="MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRI
                     SHIDRTQGSQELMLHSLGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTAR
                     DMAAASRKIPDSRLKAGDLVFFNTGGAHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLS
                     TPFYAKNYLGAHTFFTE"
BASE COUNT          601 a          783 c          770 g          693 t
ORIGIN      
        1 tttcctgcgt gtgtcgggtg tatcgaaatc aagccgaatc aaatatatcg gacttcgata
       61 atgtcgtatt cgcgcacgcc gcccggggct tggacttccg ccgtatcgcc ctcttccttg
      121 ccaattaagg cgcgggcaat cggtgagccg acatagattt tgccctgttt gatatccgct
      181 tcgtcttcgc cgacaatttg gtaggtaacg tgttcttccg tttccaaatc ttccagcgta
      241 accgtcgtac cgaacacgat tttgccttcg gcgtggattt cggtcggatt gatgatgtgg
      301 gcaacggaaa gtttgtgttc cagctcggaa atgcggcctt cgataaagcc ttggcgttct
      361 ttggcggctt catattcggc gttttcggac aaatcgccgt gcgatctggc ttcagcaatc
      421 gcttcgatca cttcggggcg cgccacgctt ttaagctgct gcaattcctg tttcagcaat
      481 tccgcaccgc gtacggtcag ggggattttt tgcatcggtc ttttttctcc atattccggc
      541 acaccggttt gcggcagcaa acataccgca taccgtcttg ttttgtgcgt ccggatatta
      601 aaataaaaac acaagccgcc cggaaaatcg gcggcttgtc tgtcgttgaa cagcggctat
      661 tctaccaaat tctatgaaat tggcaatcgt gccgtgccgt ccgcaaacac gctatgtccg
      721 caacaaaagc cgaaaatatg ccggcaaaaa aattttagaa acaaaaaatt taaaaataat
      781 caattttcgg cacaaaaaac catattcacg gactttaaaa ccgaaaatgc caaacctgag
      841 atttttcaga cggcatttgc accagtataa tgcaggctgt ttttatcttt atatttacgt
      901 tttgccatga ccgaatccgt ccgcctccct gccgcctcgc tcaaactttc caccgtcgcc
      961 ctgcccggct ccaaaagcat cagcaaccgc accctgctgc ttgccgcctt gtccgacaat
     1021 gcttgcgaaa tccattccct gctcaaatcc gacgataccg accgtatgct cgaagcactc
     1081 gataaactcg gcgttcaaat cgaatatctt gccgaagacc gtctgaaagt gcacggcaca
     1141 ggcggacgct tccccaaccg cactgccgat ttgtttttgg gcaacgcggg cacggcgttc
     1201 cgcccgttaa ccgccgctct ggccgttttg ggcggcgatt atcatctgca cggcgtgcct
     1261 cgtatgcacg aacgtcctat cggcgatttg gtcgatgcgt tgcggattgc cggcaccgat
     1321 gtcgaatatc tcggcaacga acactatccg ccgcttcata tcggcgaacg ccaagacaac
     1381 ggcgaacacg tgattccgat taaaggcaat gtgtccagcc agtttctgac cgccctttta
     1441 atggcgttgc cactgaccgg acaggcattt gaaatccgta tggtcggcga gttaatttcc
     1501 aagccctata tcgacatcac cttgaaactg atggcgcaat tcggcgtaca ggttgccaat
     1561 gaagactacc gcgtcttcaa aattcccgcc gatgcgcact accacgcgcc cgaacacttg
     1621 cacgtcgaag gcgatgcctc cagcgcgtcc tacttcctcg cagccggttt gattgccgcc
     1681 acgcccgtcc gcgttaccgg tatcggcgca aacagcatac agggcgatgt cgcctttgcc
     1741 cgtgagctgg aaaaaatcgg ggcggacgtg gtttggggcg aaaacttcgt cgaagtctcg
     1801 cgcccgaaag aacgtgccgt ccaagccttt gatttggatg cgaaccatat ccccgatgcc
     1861 gcgatgaccc tcgccatcgt cgcgcttgct acagggcaaa cctgcacgct tcgcaacatc
     1921 ggttcgtggc gcgtcaaaga gaccgaccgc attgccgcaa tggcgaacga gttgcgcaaa
     1981 ctcggtgcaa aagtcgccga agaagccgaa gcaattcaca tcaccccgcc cgaaacgccg
     2041 acacccgacg ccgtcatcga cacttacgac gaccaccgca tggcaatgtg tttctcgctg
     2101 gtttcgctgt tgggcgtacc cgtcgtcatc aacgatccga aatgcaccca caaaaccttc
     2161 ccgacttatt tcgacgtgtt ctcatcgctg accgaaacag cggaataagg cggcattttg
     2221 ccgcgattcc ggcgcggcgc ggcgggcggc tcattctgta aagaaagtat gtgcgccgag
     2281 gtagtttttg gcgtaaaacg gtgtggagag tttttcggtt ttgatggttt tgccgctgct
     2341 gggggcatgg atgaattcgc cgttgccgat atagagtccg acgtgtgagt agcggtgtgc
     2401 gccgccggtg ttgaagaata cgaggtcgcc ggccttaagg cggctgtcgg ggattttgcg
     2461 gcttgccgcc gccatgtcgc gggcggtgcg cggcagcttg acgttgaggg cgtttttgta
     2521 aacgaattga atcatgccgc tgcaatcgaa gccggttgcg gtgctgctgc cgccccattt
     2581 gtagggcgtg ccgatgagtc cgaggctgtg gagcatgagt tcctgcgagc cttgtgtgcg
     2641 gtcgatgtgg ctgatgcgga cggcttggat ttgccggact gtctgtttgg gtttcggttg
     2701 gcggtgtttg ccggaggtcg tgccgcatga ggcgaggagc agtgcgctga gacagaggaa
     2761 aagggttttg tcggggggaa acatggtttt tcctttgcgg gttcggatat gccgtctgaa
     2821 ggtgtttcag acggtatagt ggattaa
//
LOCUS       DAWKJW010000191         2798 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.191, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000191 DAWKJW010000000
VERSION     DAWKJW010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2798
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.191"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..392
                     /gene="mafA"
                     /locus_tag="WJJ54_001817"
     CDS             <1..392
                     /gene="mafA"
                     /locus_tag="WJJ54_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HEZ7342637.1"
                     /translation="PPEYADTDVFVTVDVFGTVRSRTELHLYNAETLKAQTKLEYFAV
                     DRDSRKLLIAPKTAAYESQYQEQYALWMGPYSVGKTVKASDRLMVDFSDITPYGDTTA
                     QNRPDFKQNNGKNPDVGNEVIRRRKGG"
     gene            396..1664
                     /gene="mafB"
                     /locus_tag="WJJ54_001818"
     CDS             396..1664
                     /gene="mafB"
                     /locus_tag="WJJ54_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HEZ7342638.1"
                     /translation="MKPLRRLTNLLAACAVAAAALIQPALAADLAQDPFITDNAQRQH
                     YEPGGKYHLFGDPRGSVSDRTGQINVIQDYTHRMGNLLIQQANINGTIGYHTRFSGHG
                     HEEHAPFDNHASRSASKEQGNVDEGFTVYRLNWEGHEHHPADAYDGPKGGNYPKPTGA
                     RDEYTYHVNGTARSIKLNPTDTRSIRQRISDNYSNLGSNFSDRADEANRKMFEHNAKL
                     DRWGNSMEFINGVAAGALNPFISAGEAVDQWMQENPNAAETVEALVNVLPFAKVKNLT
                     KAAKPGKAAVSGDFSDSYKHNTASRLSQSVDGEMFQTRNVDFKAKSIGTKIHDGAQGK
                     HISGHRNYIEGKSTLNQNINPQELLNGIHSGAYPVISKGARGNPVVDFGYPIGSDGKS
                     GLSTNFGTIHSGKNGVHIVPANPKTIKKVQ"
     gene            1667..1984
                     /locus_tag="WJJ54_001819"
     CDS             1667..1984
                     /locus_tag="WJJ54_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342639.1"
                     /translation="MNILPSWLRVGMNIAMLGMIHSDIRLITVDYEEGRRFLKIKNYL
                     SREAITEDHEDMEYLITELWSMCGEYFDEADFECIYSNHSSMELNQINGAVFRRKELI
                     SQA"
     gene            2118..2794
                     /locus_tag="WJJ54_001820"
                     /pseudo
     CDS             2118..2794
                     /locus_tag="WJJ54_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670623.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hint domain-/BECR-fold containing toxin"
BASE COUNT          883 a          735 c          620 g          560 t
ORIGIN      
        1 taccgcccga atacgccgac accgacgtat tcgtaaccgt cgacgtattc ggcaccgtcc
       61 gcagccgcac cgaactgcac ctctacaacg ccgaaaccct taaagcccaa accaagctcg
      121 aatatttcgc cgttgaccgc gacagccgga aactgctgat tgcccctaaa accgccgcct
      181 acgaatccca ataccaagaa caatacgccc tctggatggg accttacagc gtcggcaaaa
      241 ccgtcaaagc ctcagaccgc ctgatggtcg atttctccga catcaccccc tacggcgaca
      301 caaccgccca aaaccgtccc gacttcaaac aaaacaacgg taaaaacccc gatgtcggca
      361 acgaagtcat ccgccgccgc aaaggaggat aaaccgtgaa accgctgcgc agactgacaa
      421 acctccttgc cgcctgcgcc gtagcggcgg ccgcactcat acagcccgcc ctcgcggcgg
      481 acttggcgca agacccgttc attaccgata acgcccaacg gcagcactac gaacccggcg
      541 gcaaatacca cctcttcggc gacccgcgcg gcagcgtctc cgaccgcacc ggtcaaatca
      601 acgtcatcca agactatacc caccggatgg gcaacctgct catccagcag gcaaacatca
      661 acggcacaat cggctaccac acccgctttt cgggacacgg acacgaagaa cacgccccct
      721 ttgacaacca tgccagccgc agcgcaagca aagaacaagg caacgttgac gaaggcttta
      781 ccgtgtaccg gctcaactgg gaaggacacg agcaccatcc cgccgatgcc tacgacggcc
      841 cgaagggcgg caattacccc aaacctacgg gcgcacgcga cgaatacacc tatcacgtca
      901 acggcacagc acgcagcatc aaactcaatc cgaccgacac ccgcagcatc cggcaacgca
      961 tatccgacaa ttacagcaac ctcggcagca atttctccga ccgcgccgat gaagccaaca
     1021 gaaaaatgtt cgagcacaat gccaagctcg accgctgggg caacagcatg gagtttatca
     1081 acggcgtcgc cgccggcgcg ctcaacccct ttatcagcgc gggcgaagcc gttgaccagt
     1141 ggatgcagga aaaccccaat gccgccgaaa ccgtcgaagc cctggtcaac gtcctgccgt
     1201 ttgccaaagt caaaaacctg acaaaggcgg caaaaccggg gaaggctgcg gttagtgggg
     1261 atttctcaga ctcctacaag cataacactg cttcaagatt atctcagtct gtagatggag
     1321 aaatgtttca aacccgcaat gttgatttta aagcaaaatc tattgggact aaaattcatg
     1381 atggagctca agggaaacat atttcaggac atagaaacta cattgaaggt aagagtactt
     1441 taaatcaaaa cattaatcct caagaattgt tgaacggaat acattcaggt gcttatccag
     1501 ttatttctaa aggagcaaga ggaaatcctg ttgttgattt tgggtatcct ataggcagcg
     1561 atgggaaatc aggattaagt accaattttg gtacgattca ttcaggtaaa aatggagttc
     1621 acattgttcc ggctaaccct aaaaccatta aaaaggtgca atagttatga atatattacc
     1681 aagctggctg cgagtcggta tgaatatagc aatgctgggc atgatacact cagatatcag
     1741 gttaattacc gtagattacg aggaaggaag aaggttttta aaaatcaaaa attatttatc
     1801 aagagaagcc atcacagaag accatgaaga tatggaatat ttgattacag agttatggtc
     1861 tatgtgtgga gaatattttg atgaagctga ctttgaatgt atttattcta atcattcttc
     1921 tatggagtta aaccaaataa atggtgcagt attcaggaga aaggaattaa tttcgcaagc
     1981 gtaggttaaa aaaccaacaa tcacaatgtc ttctgaaacc gtgtttaatt ttcagacggc
     2041 atttccttcg tttgaaatag gatattgaga actgagttct tcaaaaatcc tacacttgct
     2101 ccttccacgg cagcaccttg gtcaaaacgg cagacggctg aaaagccatt gcccgtatcc
     2161 gaaccggcga ccgcgtcttc gccaaggacg aggcaagcgg aaaaacggga tacaaacccg
     2221 ttaccgcccg atacggcaat ccgtatcaag aaaccgttta cattgaaatt tcagacggca
     2281 tcggtaaaat acagaccctc gtttccaata aaatccaccc gttttacagt caaggaaagt
     2341 ggatacaggc aggtcgtctg aaaaaaggcg acaccctgct ttccgaaagc ggtgcaaaac
     2401 agacggttca aaacattacc ctcaaacagc agccgctcaa agcctacaat ctgaccgttg
     2461 ccgactggca tacctacttc gtcaagggta atcaggcgga acggaagggg tttgggttca
     2521 taatgcgtgt ccgccaagaa aaacaccatc tacccccgta tatgggaatg attcagaagc
     2581 atatgcagca gcaaagaaat tgggatatag aaaaataaaa gaaagaacga gaaatgatgc
     2641 tgctattttt aaaaaaggaa agagttatat atcacgcgat gtagattcac ataatggagg
     2701 ggcttggaaa gaagcatctt cacccaagaa gctgaacaga aaagaaacaa gaaacggtac
     2761 atttgataaa aacctaaatc gtattggaga ttaattat
//
LOCUS       DAWKJW010000192         2789 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.192, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000192 DAWKJW010000000
VERSION     DAWKJW010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2789)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2789)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2789
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.192"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            147..704
                     /locus_tag="WJJ54_001821"
     CDS             147..704
                     /locus_tag="WJJ54_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEZ7342640.1"
                     /translation="MGFGCREGKEFCKGLSLPEIIRDLLEMPSETAIADITRTYSAHY
                     LNPNNRNMSLFPQALPCLDKLKAQGFRLAVATGKGRAGLDNAVSQTATGDYWLATACA
                     GEYPSKPSPEMVFGLCGELGLDPKEALVVGDTAHDLHMAANAGAAAVGVTTGAHSREQ
                     LLGAPHLAVLDDLSELPGFLARHYA"
     gene            complement(791..1759)
                     /gene="ispH"
                     /locus_tag="WJJ54_001822"
                     /gene_synonym="lytB"
     CDS             complement(791..1759)
                     /gene="ispH"
                     /locus_tag="WJJ54_001822"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEZ7342641.1"
                     /translation="MNEKTIILANPRGFCAGVDRAISIVERALEEFGAPIYVRHEVVH
                     NKFVVDNLREKGAVFIEDLAEVPPGATLVYSAHGVSKAVRQEAAERGFRVFDATCPLV
                     TKVHKEVARLDAQDCEIIMIGHKGHVEVEGTMGQLAPGKMLLVETVGDVAKLEVRNPD
                     KLAYVSQTTLSVDETKDIIAALNARFPNIRNPHKEDICYATTNRQTAVKELAEQCDIV
                     IVVGSPNSSNSNRLREVAASRGIDAYMVDNAGYLQRAWFEGKNKVGVTAGASAPEVLV
                     QEVLATIRGWGHETVREGEGTEESIVFVLPKELRREGETKPDLCKR"
     gene            complement(1788..2285)
                     /locus_tag="WJJ54_001823"
     CDS             complement(1788..2285)
                     /locus_tag="WJJ54_001823"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HEZ7342642.1"
                     /translation="MSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQYRERVNVIPS
                     FFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVTVSAYLVRAILRDEFATLGKTGAAM
                     IIGGALGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLAVLDNIVHRKT
                     QEEKY"
     gene            complement(2491..2595)
                     /locus_tag="WJJ54_001824"
                     /pseudo
     CDS             complement(2491..2595)
                     /locus_tag="WJJ54_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT          639 a          835 c          686 g          629 t
ORIGIN      
        1 gccaacaggt taagtgcgcc cgctgccgcc taaaaagcag cccggatgcc tgattatcgg
       61 gtattcgggg aggattaagg gggtatttgg gtaaaattag gaggtatttg gggcgaaaac
      121 agccgaaaac agccgaaaac ctgtgtttgg gtttcggctg tcgggaggga aaggaatttt
      181 gcaaaggtct cagcctgccc gaaatcatcc gcgacctgct cgaaatgccg tctgaaaccg
      241 ccattgccga catcacacgc acttattccg cacattacct caatcccaac aaccgcaata
      301 tgtccttgtt tcctcaggca ctgccctgtc tggacaagct caaagcgcaa ggcttccggc
      361 ttgccgtcgc cacgggcaaa gggcgggcgg gcttggacaa cgccgtcagc caaaccgcca
      421 ccggcgacta ttggctcgcc accgcctgcg cgggggaata tccctccaaa ccctcgcccg
      481 aaatggtatt cggactttgc ggcgaactgg gactcgaccc gaaagaggca ttggtcgtcg
      541 gcgatacggc gcacgacctg catatggcgg caaacgcggg ggcggcggca gtcggcgtta
      601 ccaccggcgc acattcgcgc gaacagctcc ttggcgcacc acatctcgcc gtattggacg
      661 acttgtccga actgcccggt tttcttgcac gacattacgc ctgatcggtt tccgcatccg
      721 gcacgcggca aaaatgccgt ctgaagcctg ttcagacggc atttgtgttg cccaaacatt
      781 caacgcttgc tcaacgtttg cacaaatcgg gtttggtttc gccctcacgg cgcaactctt
      841 tgggcaggac gaacacgatg ctttcttccg taccctcccc ttcgcgcacg gtttcgtgcc
      901 cccatccgcg tatggttgcc aatacttcct gcaccaacac ttcgggcgcg gacgcgcctg
      961 ccgttacgcc gactttgttt ttgccctcaa accacgcgcg ttgcaggtag cctgcattat
     1021 ccaccatata cgcatcgatt ccgcgcgatg ccgccacttc gcgcaggcgg ttgctgttgg
     1081 acgaattggg cgaaccgacc acaatcacga tgtcgcactg ttccgccagc tctttgacgg
     1141 cggtttgccg gttggtcgtc gcatagcaga tgtcttcctt gtgcggattg cggatattgg
     1201 ggaaacgcgc gttcagcgcg gcgatgatgt ctttggtttc atcgaccgag agcgtggttt
     1261 ggctgacata ggcgagtttg tcggggtttc tgacttcgag ttttgccaca tctccgaccg
     1321 tttcgaccaa aagcattttg cccggcgcaa gctgccccat cgttccttca acctcgacgt
     1381 gccccttatg cccgatcatg atgatttcac agtcttgggc atccagtcgg gcgacttcct
     1441 tatgcacttt cgtcaccagc gggcaagtcg catcaaacac gcggaaaccg cgctccgccg
     1501 cttcttgccg caccgccttc gatacgccgt gtgccgaata aaccagtgtc gcgcccggcg
     1561 gcacttccgc caagtcttca ataaacaccg cacctttttc acgcaggttg tccacgacga
     1621 atttgttgtg aacgacttcg tggcgcacat aaatcggcgc gccgaactct tccaaagcac
     1681 gttcgacaat actgattgcc cgatccacac cagcgcagaa gccgcgcgga ttggcaagga
     1741 tgatggtttt ctcgttcata agcccggtat tccgttttca gacggcatca atatttttct
     1801 tcttgggttt tacggtggac gatgttgtcc aacactgcca acaccgcacc gacgcagata
     1861 aagctgtcgg caatattaaa ggcgggataa aaccaatttt gccaataaaa caataagaaa
     1921 tcgacgacat gaccgtgtat caggcggtcg atgacattgc ctaacgcacc gccgataatc
     1981 attgccgcac ccgttttgcc gagggttgca aactcatcgc gcaagatggc gcgtaccaaa
     2041 tacgcgctca ccgtcaccgc cagcaccaaa aaaaagtatt tttgccagcc gccctgatcg
     2101 gcaaggaagc tgaacgccgc acccgggttg tacaccagcg tcagatcgaa aaaggaagga
     2161 atgacattga cgcgttcccg atactgaaac gacgacagca ccgcccactt cgaccactgg
     2221 tccagcacga tggcggcaag tgccaatacc caatagcgcg ttttacttga aacagatgaa
     2281 gacatatttt tcaacagccg gtaaaagagt accattttac ccgaaaaccc cctttcctgt
     2341 acccgaaacg gcaaatgccg taatcttaaa acccgtcatt cccgacaaca ccgtaatctc
     2401 gaaacccgtc attcccgcgt aggcgggaat ccagacctgt ccgcacagaa acttatcgga
     2461 taaaaacagt tgcccaaacc ccgcgttcta tagtggatta aattcaaacc agtacggcat
     2521 tgcctcgcct tgccgtacta tttgtactgt ctgcggcttc gttgccttgt cctgatttaa
     2581 atttaatcca ctatagattc ccacttccgt gggaatgacg gttcagttgc attccgacaa
     2641 caccgtaatc ttgaaatccg tcattcccgc gcaggcggga atctatcgga aatgactgaa
     2701 acctcgagat tctagattcc cactttcgtg ggaatgacgg ttcagttgcg ttccaacaac
     2761 accgcaatct cgaaatccgt cattcccgc
//
LOCUS       DAWKJW010000193         2770 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.193, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000193 DAWKJW010000000
VERSION     DAWKJW010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2770)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2770)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2770
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.193"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            33..473
                     /locus_tag="WJJ54_001825"
     CDS             33..473
                     /locus_tag="WJJ54_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB"
                     /protein_id="HEZ7342643.1"
                     /translation="MAGGNKPPKPSTQQHPTHSDNNIGLPASYVKPDTSISPTGTIQD
                     RIRWTKSKFPTEKSLNGHFKAHGKEFGDITIEDYQKMASDLLSKQTSDKILGYQTEHR
                     RVRYDINNNIYVLANPKTFKIKTMFKPNLGKKYYDGEFKKDMGN"
     gene            439..645
                     /locus_tag="WJJ54_001826"
     CDS             439..645
                     /locus_tag="WJJ54_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342644.1"
                     /translation="MMENSKKTWEIDGEIWLHCPVCGTKVMDYDICDVCQWQNTGETN
                     IDGGPNEMTLAEAKEAYAKGLPIR"
     gene            666..884
                     /locus_tag="WJJ54_001827"
     CDS             666..884
                     /locus_tag="WJJ54_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342645.1"
                     /translation="MMTESHGYLSNNLPVKIINDIIYATQLVEDLVLGKIKIVDFLKS
                     YNNFYCWLGFDELPQSEKIKFLSYLNIL"
     gene            881..1240
                     /locus_tag="WJJ54_001828"
     CDS             881..1240
                     /locus_tag="WJJ54_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HEZ7342646.1"
                     /translation="MRLKLKNYDCSDFDLEDFPQDKLENFCILLTLSIGFDESNGADY
                     FYVYIYSTEWLLSNIHRPMSLKNSIVTNRFNIEHILKLINDILEICNSTSEDKSISNL
                     AKYFDWEFDDYNLNIQD"
     gene            1316..1528
                     /locus_tag="WJJ54_001829"
     CDS             1316..1528
                     /locus_tag="WJJ54_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342647.1"
                     /translation="MKLINFEESSVKISLDKDELYIIQAIVGEIYSGVCVDCRDFEII
                     HGVEKIKFFLWIKNLKKYMILGINVS"
     gene            1615..1731
                     /locus_tag="WJJ54_001830"
                     /pseudo
     CDS             1615..1731
                     /locus_tag="WJJ54_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235291.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            1790..2146
                     /locus_tag="WJJ54_001831"
     CDS             1790..2146
                     /locus_tag="WJJ54_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mimic protein"
                     /protein_id="HEZ7342648.1"
                     /translation="MNEHNLLIFCLKDNVSISEYTEMIDWAYKNIQSETVVEITENQI
                     IEYQNRGLWGLVSEITDNWLFGPSEGDWLIDKESILAVKEKLQNSDFSTEPLVKNIIH
                     VLEYAIKNEKTVIFHF"
     gene            2319..2693
                     /locus_tag="WJJ54_001832"
     CDS             2319..2693
                     /locus_tag="WJJ54_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342649.1"
                     /translation="MIIQNEFNLYPSNMLPERFCYPEKYVRISNDTSLIPYIQPHNFH
                     WWFENYGTEGAEVAYIFRNSILPDLNLIPFASNGEWEAYFDGNDVTGNPRVIVINLDN
                     IENHEFFNSFEEWLELAIKDTW"
BASE COUNT         1015 a          390 c          512 g          853 t
ORIGIN      
        1 ctgcccgccc tatgcagact ttagatgggg agatggcagg tgggaataag ccaccaaaac
       61 caagtacgca gcaacaccct acacactctg ataacaatat cggcttacct gcctcatatg
      121 ttaaacctga tacatctatt tctccgacag gaacaattca agaccgcatc agatggacaa
      181 agtccaagtt tcctactgag aaatctttaa atggacattt caaagctcat ggaaaagaat
      241 ttggcgatat aaccattgaa gactaccaaa aaatggcgtc tgatttgtta tcaaaacaga
      301 catcggacaa gatattaggt tatcagacgg aacatagacg agtgcgctat gatatcaata
      361 acaatatcta tgttttggcc aatccaaaaa cattcaaaat caaaacaatg tttaaaccaa
      421 acttaggaaa gaagtattat gatggagaat tcaaaaaaga catgggaaat tgacggagaa
      481 atatggctac attgtcctgt ttgcggaact aaagttatgg actatgatat ctgtgacgtt
      541 tgtcagtggc aaaatacagg agaaactaat atagatggtg gccctaatga aatgacactt
      601 gcggaggcga aagaagctta cgcaaaaggc ttaccaatca gataaataag cacctagaga
      661 aatcaatgat gacggaatcc catggttacc tatcaaataa tttacctgtt aaaatcataa
      721 atgatattat ttatgcaacc cagttagtcg aagatttggt tttaggaaaa ataaaaattg
      781 ttgatttttt aaaatcatat aacaattttt attgttggct tggttttgat gagttgcctc
      841 aatctgagaa aataaaattc ctaagctatc tcaatatatt atgagattaa aattaaaaaa
      901 ttatgattgt tctgactttg atttggaaga tttcccacaa gacaagttag aaaatttttg
      961 tatacttttg acattatcaa taggttttga tgaaagtaat ggtgctgatt atttttatgt
     1021 ttatatatat agcaccgaat ggttactttc aaatatacat agaccgatgt cattaaaaaa
     1081 ctcaattgtt acaaaccgtt ttaatattga acacatatta aaattgataa atgatatatt
     1141 ggaaatatgt aattcaacgt ctgaagataa gtctatatca aatttggcaa aatattttga
     1201 ctgggaattt gacgattata atctaaatat ccaagactaa agatggtgga cagcatttag
     1261 accaaaaaca ggcaaacggt attttgatga cgaattaaaa taaaaggaat tattcatgaa
     1321 attaattaat tttgaagaga gttcagttaa aattagtctc gataaagatg agttgtatat
     1381 tattcaagca attgtaggag aaatttattc aggcgtatgc gtggattgta gagattttga
     1441 gataattcat ggtgttgaaa aaataaagtt ctttctttgg ataaagaact taaaaaaata
     1501 tatgatactt gggataaatg ttagctaggt aaggtgggca cttgttgccc accttttgcc
     1561 gtatattaaa aatccttttc aggctggaac tgggtgggca tcaatgccaa ccctaattgt
     1621 gctgatgaag caggaaaact gatatgggaa aacgacccca ataaaaattg gtgggctaac
     1681 cgtatggatg atattcgcgg catcatccaa ggtgcggtta atcctttaat ttacaaggta
     1741 agcaagcaaa agattattta caacaaactc atatcaggaa cttagacaaa tgaatgaaca
     1801 caacctgtta attttctgtt taaaagacaa tgtttcaatt agtgaatata ctgaaatgat
     1861 tgattgggct tataaaaaca ttcaatctga aacagttgta gaaattacgg aaaatcaaat
     1921 tattgaatat caaaatcgtg gattatgggg gcttgtttct gaaattaccg ataattggtt
     1981 atttggacca agtgaggggg attggctaat agataaggaa agtattttgg ctgtaaaaga
     2041 aaaattacaa aattcagatt tttctacaga gcccttagtg aaaaatatta ttcatgtact
     2101 tgaatatgct ataaaaaatg aaaaaacagt aatttttcat ttttgagact aatccaattt
     2161 ttagtaatat tgatgcagag caagcagcat tagatgccgc aaacatgggg agaagctatt
     2221 caatttagaa ttaaaaaaca aattgaaaat gaactagcac caccaaattg gtctacccag
     2281 tttcctaatg gtagtattta tgatcctaag gtaacgaaat gattattcaa aatgaattta
     2341 atttatatcc tagtaatatg cttcctgaaa ggttttgtta tcctgaaaag tatgttcgta
     2401 tctctaacga tacatcttta ataccttata ttcagccaca taattttcac tggtggtttg
     2461 agaattatgg aacagaaggg gcagaagtag cttatatatt tagaaattct atcctgcctg
     2521 atttaaatct tatcccattc gctagtaatg gagaatggga agcttatttt gatggtaatg
     2581 atgtaacagg aaatcctagg gttattgtca ttaatttaga taatatagaa aaccatgaat
     2641 tttttaatag ttttgaagag tggcttgaat tagcaattaa ggatacttgg taagcagcta
     2701 tctataaaag agatgggacc atcctggata actaggataa actcgattta ctaattgttt
     2761 taaaatggaa
//
LOCUS       DAWKJW010000194         2757 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.194, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000194 DAWKJW010000000
VERSION     DAWKJW010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.194"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            114..437
                     /locus_tag="WJJ54_001833"
     CDS             114..437
                     /locus_tag="WJJ54_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003775941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ7342650.1"
                     /translation="MQNETINLKQHLAAIKEYWQPEIINRHGFQFRLVKLLGDYGWHT
                     HGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSENGCSLVLIELSD
                     PSEAV"
     gene            551..2728
                     /locus_tag="WJJ54_001834"
     CDS             551..2728
                     /locus_tag="WJJ54_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HEZ7342651.1"
                     /translation="MTRFKYSLLFAALLPVYAQADVSVSDDPKPQKSTELPTITVTAD
                     RTASSNDGYTVSGTHTPLGLPMTLREIPQSVSVITSQQMRDQNIKTLDRALLQATGTS
                     RQIYGSDRAGYNYLFARGSRIANYQINGIPVADALADTGNANTAAYERVEVVRGVAGL
                     LDGTGEPSATVNLVRKRPTRKPLFEVRAEAGNRKHFGLGADVSGSLNTEGTLRGRLVS
                     TFGRGDSWRQRERSRDAELYGILEYDIAPQTRVHAGMDYQQAKETADAPLSYAVYDSQ
                     GYATAFGPKDNPATNWANSRHRALNLFAGIEHRFNQDWKLKAEYDYTRSRFRQPYGVA
                     GVLSIDHNTAATDLIPGYWHADPRTHSASVSLIGKYRLFGREHDLIAGINGYKYASNK
                     YGERSIIPNAIPNAYEFSRTGAYPQPSSFAQTIPQYGTRRQIGGYLATRFRAADNLSL
                     ILGGRYSRYRTGSYDSRTQGMTYVSANRFTPYTGIVFDLTGNLSLYGSYSSLFVPQSQ
                     KDEHGSYLKPVTGNNLEAGIKGEWLEGRLNASAAVYRARKNNLATAAGRDPSGNTYYR
                     AANQAKTHGWEIEVGGRITPEWQIQAGYSQSKTRDQDGSRLNPDSVPERSFKLFTAYH
                     FAPEAPSGWTIGAGVRWQGETHTDPATLRIPNPAAKARAADNSRQKAYAVADIMARYR
                     FNPRAELSLNVDNLFNKHYRTQPDRHSYGALRTVNAVFTYRFK"
BASE COUNT          667 a          979 c          692 g          419 t
ORIGIN      
        1 gtaagccgca ggcttgcatc aaagtcgata acgctttcgt tacaactccg cccactgaac
       61 gaagccaaaa cgacaaaccg catcgtaaac cacccaaccc ataggagaac cccatgcaaa
      121 acgaaaccat caacctgaaa cagcaccttg ccgccatcaa agaatactgg cagcccgaaa
      181 tcatcaaccg ccacgggttc caattccgtt tggtcaaact tttgggcgat tacggctggc
      241 atacgcacgg atacagcgac aaagtgctgt ttgccgtgga gggcgacatg gcggtggact
      301 tcgccgacgg cggcagcatg acgatacgcg agggcgagat ggcggtcgtg ccgaagtcgg
      361 tgtcgcaccg cccgcgttcg gaaaacggct gctcgttggt gctgattgag ttgtccgacc
      421 cgtccgaggc cgtctgaaaa cgaagtttcc gaaggaagct gagtttctgc gaagctaaaa
      481 gcagcctgca ccttcaatca atatgccgaa aatacaactc caccgcacac caacacacaa
      541 aggaaatccc atgacacgct tcaaatattc cctgctgttt gccgccctgt tgcccgtgta
      601 cgcgcaggcc gatgtttctg tttcagacga ccccaaaccg cagaaaagca ctgaattgcc
      661 gaccatcacc gttaccgccg accgcaccgc gagttccaac gacggctaca ctgtttccgg
      721 cacgcacacc ccgctcgggc tgcccatgac cctgcgcgaa atcccacaga gcgtcagcgt
      781 catcacatcg caacaaatgc gcgaccaaaa catcaaaacg ctcgaccgcg ccctgttgca
      841 ggcgaccggc accagccgcc agatttacgg ctccgaccgc gcgggctaca actacctgtt
      901 cgcgcgcggc agccgcatcg ccaactacca aatcaacggc atccccgttg ccgacgcgct
      961 ggccgatacg ggcaatgcca acaccgccgc ctatgagcgc gtagaagtcg tgcgcggcgt
     1021 ggcggggctg ctggacggca cgggcgagcc ttccgccacc gtcaatctgg tgcgcaaacg
     1081 cccgacccgc aagccattgt ttgaagtccg cgccgaagcg ggcaaccgca aacatttcgg
     1141 gctgggcgcg gacgtatcgg gcagcctgaa caccgaaggc acgctgcgcg gccgcctggt
     1201 ttccaccttc ggacgcggcg actcgtggcg gcagcgcgaa cgtagccgcg atgccgaact
     1261 ctacggcatt ttggaatacg acatcgcacc gcaaacccgc gtccacgcag gcatggacta
     1321 ccagcaggcg aaagaaaccg ccgacgcgcc gctcagctac gccgtgtacg acagccaagg
     1381 ttatgccact gccttcggcc cgaaagacaa ccccgccaca aattgggcga acagccgcca
     1441 ccgtgcgctc aacctgttcg ccggcatcga acaccgcttc aaccaagact ggaaactcaa
     1501 agccgaatac gactacaccc gcagccgctt ccgccagccc tacggcgtag caggcgtgct
     1561 ttccatcgac cacaacaccg ccgccaccga cctgattccc ggttattggc acgccgaccc
     1621 gcgcacccac agcgccagcg tgtcattgat cggcaaatac cgcctgttcg gccgcgaaca
     1681 cgatttaatc gcgggtatca acggttacaa atacgccagc aacaaatacg gcgaacgcag
     1741 catcatcccc aacgccattc ccaacgccta cgaattttcc cgcacgggcg cctatccgca
     1801 gccatcatcg tttgcccaaa ccatcccgca atacggcacc aggcggcaaa tcggcggcta
     1861 tctcgccacc cgtttccgcg ccgccgacaa cctttcgttg atactcggcg gcagatacag
     1921 ccgttaccgc accggcagct acgacagccg cacacaaggc atgacctatg tgtccgccaa
     1981 ccgtttcacc ccctacacag gcatcgtgtt cgacctgacc ggcaacctgt cgctttacgg
     2041 ctcgtacagc agcctgttcg tcccgcaatc gcaaaaagac gaacacggca gctacctgaa
     2101 acccgtaacc ggcaacaatc tggaagccgg catcaaaggc gaatggcttg aaggccgtct
     2161 gaacgcatcc gccgccgtgt accgcgcccg taaaaacaac ctcgccaccg cagcaggacg
     2221 cgacccgagc ggcaacacct actaccgcgc cgccaaccaa gccaaaaccc acggctggga
     2281 aatcgaagtc ggcggccgca tcacgcccga atggcagata caggcaggtt acagccaaag
     2341 caaaacccgc gaccaagacg gcagccgcct gaaccccgac agcgtacccg aacgcagctt
     2401 caaactcttc actgcctacc actttgcccc cgaagccccc agcggctgga ccatcggcgc
     2461 aggcgtgcgc tggcagggcg aaacccacac cgaccctgcc acgctccgca tccccaaccc
     2521 cgccgccaaa gcccgcgccg ccgacaacag ccgccaaaaa gcctacgccg tcgccgacat
     2581 catggcgcgt taccgcttca atccgcgcgc cgaactgtcg ctgaacgtgg acaacctgtt
     2641 caacaaacac taccgcaccc agcctgaccg ccacagttac ggcgcactgc ggacagtgaa
     2701 cgcggtgttt acctatcggt ttaaataagg tcgtctgaaa acggagtttc tgcgaag
//
LOCUS       DAWKJW010000195         2664 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.195, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000195 DAWKJW010000000
VERSION     DAWKJW010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.195"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            434..2602
                     /locus_tag="WJJ54_001835"
     CDS             434..2602
                     /locus_tag="WJJ54_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ7342652.1"
                     /translation="MNAPFFRLSLLSLTLAAGFAHAAGNANVALDTITVKGDRQGSKI
                     RTNIVTLQQKDESTATDMRELLKEEPSIDFGGGNGTSQFLTLRGMGQNSVDIKVDNAY
                     SDSQILYHQGRFIVDPALVKVVSVQKGAGSASAGIGATNGAIIAKTVDAQDLLKGLDK
                     NWGVRLNSGFASNEGVSYGASVFGKEGNFDGLFSYNRNDEKDYEAGKGFRNVNGGKTV
                     PYSALDKRSYLAKIGTTFGDDDHRIVLSHMKDQHRGIRTVREEFTVGSEDSRINIKRQ
                     APAYRETTQSNTNLAYTGKNLGFVEKLDANAYVLEKERYSADDSGTGYAGNVKGPNHT
                     RITTRGANFNFDSRLAEQTLLKYGINYRHQEIKPQAFLNSKFEISDKKKDPKDPKKEI
                     DKTAEEKAKDKKDMDLVHSYKLSNPTKTDTGAYIEAIHEIDGFTLTGGLRYDRFKVKT
                     HDGKTVSSSNLNPSFGVIWQPHEHWSFSASHNYASRSPRLYDALQTHGKRGIISIADG
                     TKAERARNTEIGFNYNDGTFAANGSYFWQTIKDALANPQNRHVSAAVREAVNAGYIKN
                     HGYELGASYRTGGLTAKVGVSHSKPRFYDTHKDKLLSANPEFGAQVGRTWTASLAYRF
                     QNPNLEIGWRGRYVQKAVGSILVAGQKDRNGKLENVVRKGFGVNDVFANWKPLGKDTL
                     NVNLSVNNVFNTFYYPHSQRWTNTLPGVGRDVRLGVNYKF"
BASE COUNT          743 a          770 c          603 g          548 t
ORIGIN      
        1 ggaatccagt ctgttcggtt tcggtttttt ccgatagatt cctgccacgt taggggttct
       61 agattcccgc tttcgcggga aggacgcgga aaggttgctt ttcgtcattc ccgcatttgt
      121 taatccacta tatttccgcc gttttttata gtggactaac aaaaaccagt acagcgttgc
      181 ctcgccttgc cgtactatct gtactgtctg cggcttcgtc gccttatcct gatttttgtt
      241 agtccactat acatttccga caaaacctgt caacaaaaaa caacacttcg caaataaaaa
      301 cgataatcag ctttgcaaaa atcccccccc ccctgttaat ataaataaaa ataattatta
      361 attatttttc ttatcctgcc aaatcttaac ggtttggatt tacttccctt catacactca
      421 aaaggacgaa caaatgaacg ccccgttttt ccgcctcagc ctgctctcgc tcacacttgc
      481 ggcaggcttt gcccacgcgg caggcaacgc caatgtcgca ttggatacca ttaccgtaaa
      541 aggcgaccgc caaggcagca aaatccgtac caacatcgtt acgctgcaac aaaaagacga
      601 aagcaccgca accgatatgc gcgaactctt aaaagaagag ccttccatcg atttcggcgg
      661 cggcaacggc acgtcccaat tcctgacgct gcgcggcatg ggtcagaact ctgtcgacat
      721 caaggtggac aacgcctatt ccgacagcca aatcctttac caccaaggca gatttattgt
      781 cgatcccgct ttggttaaag tcgtttccgt acaaaaaggc gcgggttccg cctctgccgg
      841 tatcggcgca accaacggcg cgattatcgc caaaaccgtc gatgcccaag acctgctcaa
      901 aggcttggat aaaaactggg gcgtgcgcct caacagcggc tttgccagca acgaaggcgt
      961 aagctacggc gccagcgtat tcggaaaaga gggcaacttc gacggcttgt tctcttacaa
     1021 ccgcaacgat gaaaaagatt acgaagccgg caaaggtttc cgcaatgtca acggcggcaa
     1081 aaccgtaccg tacagcgcgc tggacaaacg cagctacctc gccaaaatcg gaacaacttt
     1141 cggcgacgac gaccaccgca tcgtgttgag ccatatgaaa gaccaacacc ggggcatccg
     1201 cactgtgcgt gaagaattta ccgtcggcag cgaagattca cggataaata ttaaacgcca
     1261 agcccctgct taccgcgaaa ccacacaatc caacaccaat ttggcgtaca cgggtaaaaa
     1321 cctgggcttt gtcgaaaaac tggatgccaa cgcctatgtg ttggaaaaag aacgctattc
     1381 cgccgatgac agcggcaccg gctacgcagg caatgtaaaa ggccccaacc atacccgaat
     1441 caccactcgt ggtgcgaact tcaacttcga cagccgcctt gccgaacaaa ccctgttgaa
     1501 atacggtatc aactaccgcc atcaggaaat caaaccgcaa gcgtttttga actcgaaatt
     1561 tgagatctcc gataagaaga aagatccgaa agatcccaaa aaagaaatag ataagaccgc
     1621 tgaagaaaaa gcgaaagaca agaaagatat ggatcttgtc cattcctaca aactgtccaa
     1681 cccgaccaaa accgataccg gcgcgtatat cgaagccatt cacgagattg acggctttac
     1741 cctgaccggc gggctgcgtt acgaccgctt caaagtgaaa acccacgacg gcaaaaccgt
     1801 ttcaagcagc aaccttaacc cgagtttcgg tgtgatttgg cagccgcacg aacactggag
     1861 cttcagcgcg agccacaact acgccagccg cagcccgcgc ctgtatgacg cgctgcaaac
     1921 ccacggcaag cgcggcatca tctcgattgc cgacggcacc aaagccgaac gcgcgcgcaa
     1981 taccgaaatc ggcttcaact acaacgacgg cacgtttgcc gccaacggca gctacttctg
     2041 gcaaaccatc aaagacgcgc ttgccaatcc gcaaaaccgc cacgtctctg ccgccgtccg
     2101 tgaagccgtc aatgccggtt acatcaaaaa ccacggttac gaattgggcg cgtcctaccg
     2161 caccggcggc ctgactgcca aagtcggcgt aagccacagc aaaccgcgct tttacgatac
     2221 gcacaaagac aagctgttga gcgcgaatcc tgaatttggc gcacaagtcg gccgcacttg
     2281 gacggcctcc cttgcctacc gcttccaaaa tccgaatctg gaaatcggct ggcgcggccg
     2341 ttatgttcaa aaagccgtgg gttcgatatt ggtggcaggt caaaaagacc gcaacggcaa
     2401 attggaaaac gttgtacgca aaggtttcgg tgtgaacgat gtcttcgcca actggaaacc
     2461 gctgggcaaa gacacgctca atgttaatct ttcggttaac aacgtgttca acacgttcta
     2521 ctatccgcac agccaacgct ggaccaatac cctgccgggc gtgggccgcg atgtacgctt
     2581 gggcgtgaac tacaagttct aaaacgcaca tcccgaaaaa atgccgtctg aaagcctttc
     2641 agacggcatc tgttctgata attt
//
LOCUS       DAWKJW010000196         2597 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.196, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000196 DAWKJW010000000
VERSION     DAWKJW010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2597)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2597)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2597
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.196"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            66..2448
                     /locus_tag="WJJ54_001836"
                     /pseudo
     CDS             66..2448
                     /locus_tag="WJJ54_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222141.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
BASE COUNT          699 a          666 c          653 g          579 t
ORIGIN      
        1 attatcataa aatctattat tcgctaaccg atggatgaac aatccataca tcttgagttg
       61 ataatatgaa accattacaa atgctcccta tcgccgcgct ggtcggcagt attttcggca
      121 atccggtctt tgcggcagat gaagctgcaa ctgaaaccac acccgttaag gcagaggtaa
      181 aagcagtgcg cgttaaaggc cagcgcaatg cgcctgcggc tgtggaacgc gtcaacctta
      241 accgtatcaa acaagaaatg atacgcgaca acaaagactt ggtgcgctat tccaccgatg
      301 tcggcttgag cgacagcggc cgccatcaaa aaggctttgc tgttcgcggc gtggaaggca
      361 accgtgtcgg cgtgagcata gacggtgtaa acctgcctga ttccgaagaa aactcgctgt
      421 acgcccgtta tggcaacttc aacagctcgc gtttgtctat cgaccccgaa ctcgtacgca
      481 atattgaaat cgtgaagggc gcagactctt tcaataccgg cagtggtgca ttgggcggcg
      541 gtgtgaatta ccaaaccctg caaggacgtg atttgctgtt ggacgacagg caattcggcg
      601 tgatgatgaa aaacggttac agcacgcgta accgtgaatg gacaaatacc ctcggtttcg
      661 gcgtgagcaa cgaccgcgtg gatgctgctt tgctgtattc gcaacggcgc ggccatgaaa
      721 ccgaaagcgc gggcaaccgc ggctatccgg tagaaggtgc gggtaaagaa acgaatatcc
      781 gcggttccgc ccgcggcatc cccgatccgt ccaaacacaa ataccacagc ttcttgggta
      841 agattgctta tcaaatcaac gacaaccacc gcatcggcgc atcgctcaac ggtcagcagg
      901 ggcataatta cacgattgaa gagtcttaca acctgcttgc ttcttattgg cgtgaagctg
      961 acgatgtcaa cagacggcgt aacaccaacc tcttttacga atggacgccg gaatccgacc
     1021 ggttgtctat ggtaaaagcg gatgtcgatt atcaaaaaac caaagtatct gcggtcaact
     1081 acaaaggttc gttcccgata gaggattctt ccaccttgac acgtaactac aatcaaaagg
     1141 acttggatga aatctacaac cgcagtatgg atacccgctt caaacgcatt accctgcgtt
     1201 tggacagcca tccgttgcaa ctcggggggg ggggggcgac accgcctgtt gttcaaaacc
     1261 tttgccagtc aacgtgagtt tgaaaactta aaccgcgacg attactactt cagtggtcag
     1321 atatctcgta ccaccagctc gattcaacac cctgtgaaaa ccaccaacta cggtttctcg
     1381 ctgtctgacc aaatccaatg gaacgacgtg ttcagcagcc gcgcaggtat ccgttacgac
     1441 cacaccaaaa tgacgcctca ggaattgaat gccgactgtc atgcctgcga caaaaccccg
     1501 cccgcaccga atacttacag cggctggagc ggtttcgccg gtttggcggc tcaactgaat
     1561 caggcttggc gtgtcggtta cgacattact tccggctatc gcgtccccaa tgcgtccgaa
     1621 gtgtatttca cttacaacca cggtgcgggc acatggctgc ctagtcctaa tctgaaagcc
     1681 gagcgcagca ccacccacac cctgtctttg cagggacgcg gtgaaaaagg tacgctggat
     1741 gccaatctgt atcaaagcaa ctaccgcaat ttcctttcgg aagagcagaa gctgaccacc
     1801 agcggcgatg tcagctgtac tcagatgaat tactactacg gtatgtgtag caatccttat
     1861 tccgaaaaac tggaatggca gatgcaaaat atcgacaagg ccagaatccg cggtatcgag
     1921 ctgacaggcc gtctgaatgt ggacaaagta gcgtcttttg ttcctgaggg ctggaaactg
     1981 ttcggctcgc tgggttatgc gaaaagcaaa ctgtcgggcg acaacagcct gctgtccaca
     2041 cagccgttga aagtgattgc cggtatcgac tatgaaagtc cgagcgaaaa atggggcgtg
     2101 ttctcccgcc tgacctatct gggcgcgaaa aaggtcaaag acgcgcaata caccgtttat
     2161 gaaaacaagg gctggggtac gcctttgcag aaaaaggtaa aagattaccc gtggctgaac
     2221 aagtcggctt atgtgtttga tatgtacggc ttctacaaac cggctaaaaa cctgactttg
     2281 cgtgcaggcg tatataatgt gttcaaccgc aaatacacca cttgggattc cctgcgcggc
     2341 ctgtatagct acagcaccac caatgcggtc gaccgcgatg gtaaaggctt agaccgctac
     2401 cgcgccccaa gccgtaatta cgccgtatcg ctggaatgga agttttaatc tggtattatt
     2461 gaattaattg ccttgttgaa aattaaagcc gtccgaattg tgttcaagaa ctcattcgga
     2521 cggtttttta ccgtaaatct gtgtgatggg gttttatagt ggattaacaa aaatcaggac
     2581 aaggcgacga agccgca
//
LOCUS       DAWKJW010000197         2579 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.197, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000197 DAWKJW010000000
VERSION     DAWKJW010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2579)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2579)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2579
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.197"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(195..266)
                     /locus_tag="WJJ54_001837"
     tRNA            complement(195..266)
                     /locus_tag="WJJ54_001837"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(231..233),aa:Arg,seq:cct)
     gene            complement(286..732)
                     /locus_tag="WJJ54_001838"
     CDS             complement(286..732)
                     /locus_tag="WJJ54_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HEZ7342653.1"
                     /translation="MNFSFAPLFLVTLILLGVVSNNNSITISATILLLMQQTALIQFV
                     PLVEKHGLNLGIILLTIGVLSPLVSGKAQVPPVAEFLNFKMISAVFIGIFVAWLAGRG
                     VPLMGQQPVLITGLLIGTVIGVAFMGGIPVGPLIAAGILSFVVGKG"
     gene            complement(737..1711)
                     /gene="ispB"
                     /locus_tag="WJJ54_001839"
     CDS             complement(737..1711)
                     /gene="ispB"
                     /locus_tag="WJJ54_001839"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HEZ7342654.1"
                     /translation="MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISA
                     GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATAN
                     NLFGNAAAVLVGDFLYTRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDI
                     TEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDY
                     SGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQIANDVRTALENADCSYFEKIHDYV
                     VRSDALAYSIGEARKAVDCAVAALDALPDSEVKDAMIQLAKESLVRVS"
     gene            complement(1727..1915)
                     /locus_tag="WJJ54_001840"
     CDS             complement(1727..1915)
                     /locus_tag="WJJ54_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342655.1"
                     /translation="MVNIRTPLCGTRHCIVICLFCQSLRGSDNHMPSEKMYPDGFADI
                     IARYLNQLSSGICRLTET"
     gene            1935..2243
                     /gene="rplU"
                     /locus_tag="WJJ54_001841"
     CDS             1935..2243
                     /gene="rplU"
                     /locus_tag="WJJ54_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEZ7342656.1"
                     /translation="MYAVVKTGGKQYKVSVGEKLKVEQIPAELDSQIELTEVLMIADG
                     ESVKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA
                     "
     gene            2268..2540
                     /gene="rpmA"
                     /locus_tag="WJJ54_001842"
     CDS             2268..2540
                     /gene="rpmA"
                     /locus_tag="WJJ54_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEZ7342657.1"
                     /translation="MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTK
                     FHAGDNVGMGKDHTLFAKVDGYVEFKTKGALNRKTVSIRPYTGSEE"
BASE COUNT          754 a          693 c          576 g          556 t
ORIGIN      
        1 ataaaacaac agatttccaa gccggaacat cttttacgga gcctgaaaat catttcatga
       61 ttctaccgtc ctaaaggtcg gtttttcaag caggaagaaa aagttttcag atggcaaaaa
      121 agccctccaa cactgaaagg ccttatatcg gaaacttccc gcaacacggg aaacagacaa
      181 atgaaatcgt caaacctcgc caacaggaat cgaacctgta ttttacgctt aggaggcata
      241 cgttctatcc gttgaactat ggcgagccga aatgaaaagg agattttaac cctttccgac
      301 gacaaaagac aagatgccgg ccgcaatcag cggcccgaca gggataccgc ccataaatgc
      361 caccccgata accgtcccga ttaacagccc tgtaattaaa acaggctgct gtcccatcaa
      421 aggcacgccg cgtcccgcca gccaagccac gaaaataccg ataaaaacgg cggatatcat
      481 tttaaaattc aaaaattcgg caacgggagg aacctgcgcc tttcctgaaa ccaacggact
      541 caaaacccct atggtcaaaa gaatgatacc gagattcaac ccgtgcttct cgaccaacgg
      601 gacaaactgt atcaatgccg tctgctgcat cagcagcaat atggttgccg agatggtaat
      661 cgaattgttg ttgctgacca cccccaacag aatcagcgta accagaaaca ggggagcaaa
      721 actgaaattc atcgcctcaa gacaccctga ccaaagattc cttcgccagc tgaatcatgg
      781 catccttcac ttcgctgtcg ggcagggcat ccaacgcggc aacggcacaa tcgactgctt
      841 tgcgcgcctc gcctatcgaa tatgccaacg catccgaacg gacgacataa tcgtggattt
      901 tctcaaaata gctgcaatct gcattttcca aagcagtacg cacatcgttc gcaatctgtt
      961 cggaaccctg acgcatcaga taaatcaaag gcaaagtcgg ttttccttcc gccaaatcgt
     1021 cgccgacgtt tttgccggtt tcttcggttt cgccagaata gtccagcaca tcgtcaataa
     1081 tttggaatgc cgtgccgacg tacataccgt agtctttcaa cgcctgttcg tgttcggggg
     1141 aagccttgcc caaaattgcg ccgacttgag cggcagcttc aaacaatttt gccgttttat
     1201 attggataac ttggatatat tgttcttcgg taatgtccgt attgccgatg ttcatcagct
     1261 gcatgacttc gccctcggca ataatgttgg ttgcatccgc catcacttcc aaaacgcgca
     1321 tactgcccga ggcaaccatc agttgaaagg cgcgcgtgta taaaaagtcg ccaaccaaca
     1381 cagccgccgc attgccgaac agattgtttg ccgttgcccg cccacggcgc aaatcgcttt
     1441 catcgacgac atcgtcgtgc aggagggtgg aagtgtggat aaactcgacc atcgccgcca
     1501 gcgaatacag tttctcgtca tcataaccga ccgccttacc cgccaaaatc gtcataatcg
     1561 gacgcaggcg tttgccgccc gcgctgatga tatatgtacc gatttgcgaa atcagtgcga
     1621 catcggattg caccgcacgg ttgatgactt cattgacttt ggcaaggtct tcaggcagat
     1681 gtcgctggaa atagggcaga ttctcgagca tggcagactc tcaggtttac gtttccgtca
     1741 aacggcagat accgcttgaa agctgattca aatagcgggc aattatatca gcaaagccat
     1801 cagggtacat cttttcagac ggcatatggt tatccgaacc gcgcaaactt tgacaaaaca
     1861 ggcaaataac aatacaatgc cgagttccgc acaatggtgt gcggatatta accataaccc
     1921 ttatggagtt gagtatgtac gcggtcgtaa aaaccggcgg caaacagtat aaagtttccg
     1981 tcggcgaaaa attgaaagta gaacagatac cagccgaact cgacagccaa atcgaactga
     2041 ccgaagtttt gatgattgct gacggcgaat ctgtaaaagt tggcgcaccc tttatcgaag
     2101 gtgcaaaagt aacggctaaa gtagtggcac acggtcgtgg cgaaaaagtc cgcatcttca
     2161 aaatgcgccg ccgcaaacac taccaaaaac gccaaggcca ccgccaaaat ttcacccaaa
     2221 tcgaaatcgt ggcaatcgcc taaccttaaa acttaggagc attacaaatg gcaagtaaaa
     2281 aagcaggcgg cagcacccgc aacggtcgcg attcagaagc caaacgcttg ggcgttaaag
     2341 cctacggcaa cgagctgatt cccgcaggtt ccatcatcgt acgccaacgc ggtaccaaat
     2401 tccacgcagg cgacaacgta ggtatgggca aagaccacac tttgttcgcc aaagttgacg
     2461 gttatgtcga attcaaaacc aaaggcgcgc tgaaccgtaa aactgtcagc atccgtcctt
     2521 acaccggttc tgaagaataa tccaaccgat acctgaagcc gcatcttttc acgatgcgg
//
LOCUS       DAWKJW010000198         2578 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.198, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000198 DAWKJW010000000
VERSION     DAWKJW010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2578
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.198"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            73..702
                     /locus_tag="WJJ54_001843"
     CDS             73..702
                     /locus_tag="WJJ54_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HEZ7342658.1"
                     /translation="MIQNVVTSIILYSGTAVDLLIILMLFFAKRKSRKDIINIYLGQF
                     LGSVSLILLSLLFAFVLDYIPSKEILGLLGLIPIFLGLKVLLLGDSDGEAIAKEGLRK
                     DNKNLIFLVAMITFASCGADNIGVFVPYFTTLNLANLIVALLTFLVMIYLLVFSAQKL
                     AQVPSVGETLEKYSRWFVAVVYLGLGVYILIENNSFDMLWTVSGQEKIL"
     gene            848..2509
                     /locus_tag="WJJ54_001844"
     CDS             848..2509
                     /locus_tag="WJJ54_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEZ7342659.1"
                     /translation="MLTYTPPDARPPAKTHEKPWLLLLMAFAWLWPGVFSHDLWNPAE
                     PAVYTAVEALAGSPTPLVAHLFGQTDFGIPPVYLWVAAAFKHLLSPWAADPYDAARFA
                     GVFFAVVGLTSCGFAGFNFLGRHHGRSVVLILIGCIGLIPVAHFLNPAAAAFAAAGLV
                     LHGYSLARRRVIAASFLLGTGWTLMSLAAAYPAAFALMLPLPVLMFFRPWQSRRLMLT
                     AVASLAFALPLMTVYPLLLAKTQPALFAQWLDDHVFGTFGGVRHVQTAFSLFYYLKNL
                     LWFALPALPLAVWTVCRTRLFSTDWGILGVVWMVAVLVLLAANPQRFQDNLVWLLPPL
                     ALFGAAQLDSLRRGAAAFVNWFGIMAFGLFAVFLWTGFFAMNYGWPAKLAERAAYFSP
                     YYVPDIDPIPMAVAVLFTPLWLWAITRKNIRGRQAVTNWAAGVTLTWALLMTLFLPWL
                     DAAKSHAPVVRSMEASLSPELKRELSDGIECIGIGGGDLHTRIVWTQYGTLPHRVGDV
                     QCRYRIVLLPQNADAPQGWQTVWQGARPRNKDSKFALIRKIGENI"
BASE COUNT          503 a          646 c          676 g          753 t
ORIGIN      
        1 cggggttgaa gttgacatct acaaggttta atgtttgaat acattcaaaa atatatttga
       61 atgagatgtt ttatgattca aaatgtcgtt acttcaataa tcctgtattc tgggacagcc
      121 gtagacttac ttattatcct aatgttattt tttgccaaaa gaaaaagcag aaaagacatc
      181 attaacatct atttaggaca atttctaggc tctgttagcc tgatattgct aagtttgctt
      241 tttgcatttg tcttagatta tattcctagt aaagagattt taggtttgct cggcttgatt
      301 ccgattttcc taggcctcaa agttttgctt ttaggggatt ctgatggaga ggctattgcc
      361 aaagagggtt tgcgcaaaga taataaaaac ctgatttttc tagtcgctat gattactttt
      421 gcaagttgtg gtgctgacaa tattggtgtc tttgtcccat attttactac cttaaattta
      481 gcgaatttga tagtggcttt acttaccttt ctagtcatga tttatctctt ggttttttct
      541 gcccaaaaat tagcacaagt cccttctgtt ggagaaactt tggaaaaata tagcagatgg
      601 tttgttgctg ttgtttattt gggattgggg gtatatatcc tgattgaaaa caacagtttt
      661 gatatgctat ggactgtgtc gggccaggaa aaaatattat gaaaaagata gtatctgcaa
      721 agactgccat gtgcagtctt ttttgttgcc ggtctttttg tgtctgatgc cgtctgaagc
      781 agtctctgca cgacctttgt gcgaatattt gctacacttg gcaatccgtc catttcttct
      841 cacacttatg ctgacctata ccccgcccga tgcccgcccg cccgccaaaa cccacgaaaa
      901 accgtggctg ctgctgttga tggcgtttgc ctggttgtgg ccgggtgtat tttcacatga
      961 tttatggaat cctgccgaac ctgccgtcta taccgccgtc gaagcactgg caggcagccc
     1021 cacccctttg gttgcccatc tgttcggtca aaccgatttc ggcataccgc ccgtgtatct
     1081 ttgggttgcc gccgcgttca aacatttgct gtcgccgtgg gcagccgacc cgtatgatgc
     1141 cgcacgcttt gccggcgtgt ttttcgccgt tgtcggactg acttcctgcg gctttgccgg
     1201 tttcaacttt ttgggcagac accacgggcg cagcgtcgtc ctgattctca tcggctgtat
     1261 cgggctgatt ccagttgccc atttcctcaa tcccgccgcc gccgcctttg ccgccgccgg
     1321 actggtgctg cacggttatt ctttggctcg ccggcgcgtg attgccgcct cttttctgct
     1381 cggtacgggc tggacgctga tgtcgttggc agcagcttat ccggcagcat ttgccctgat
     1441 gctgcccttg cccgtactga tgtttttccg tccgtggcaa agcaggcgtt tgatgttgac
     1501 ggcagtcgcc tcacttgcct ttgccctgcc gcttatgacc gtttacccgc tgctcttggc
     1561 aaaaacgcag cccgcgctgt tcgcgcaatg gctcgacgat cacgttttcg gtacgttcgg
     1621 cggcgtgcgg cacgttcaga cggcattcag tttgttttac tatctgaaaa acctgctttg
     1681 gtttgcattg cctgcgctgc cgctggcggt ttggacggta tgccgcacgc gtctgttttc
     1741 gaccgattgg gggattttgg gcgttgtgtg gatggttgcc gttttggtgc tgcttgccgc
     1801 caatccgcag cgttttcagg acaacctcgt ctggctgctg ccaccgcttg ccctgttcgg
     1861 cgcggcgcaa ctggacagcc tgaggcgcgg cgcggcggcg tttgtcaact ggttcggcat
     1921 tatggcgttc ggactgtttg ccgtgttcct gtggacgggc ttttttgcga tgaattacgg
     1981 ctggcccgcc aagcttgccg aacgtgccgc ctatttcagc ccgtattatg ttcctgatat
     2041 cgatcctatt ccgatggcgg ttgccgtact gttcacaccc ttgtggctgt gggcgattac
     2101 ccggaaaaac atacgcggca ggcaggcggt taccaactgg gcggcaggcg ttaccctgac
     2161 ctgggctttg ctgatgacgc tgttcctgcc gtggctggac gcggcgaaaa gccacgcgcc
     2221 ggtcgtccgg agtatggagg catcgctttc cccggaattg aaacgggagc tttcagacgg
     2281 catcgagtgt atcggcatag gcggcggcga cctgcacacg cggattgttt ggacgcagta
     2341 cggcacattg ccgcaccgcg tcggcgatgt acaatgccgc taccgcatcg tcctcctgcc
     2401 ccaaaatgcg gatgcgccgc aaggctggca gacggtttgg cagggtgcgc gtccgcgcaa
     2461 caaagacagt aagttcgcac tgatacggaa aatcggggaa aatatataaa aaacaacaga
     2521 ttgagccgaa tttctggatt aagtgccgga aatcgcgtat aattgcgcga ttaaacct
//
LOCUS       DAWKJW010000199         2505 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.199, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000199 DAWKJW010000000
VERSION     DAWKJW010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.199"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(13..819)
                     /locus_tag="WJJ54_001845"
     CDS             complement(13..819)
                     /locus_tag="WJJ54_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HEZ7342660.1"
                     /translation="MPTVFIFLTAVYAGLGAFAWHCQQQGRGRDYPWKTELPVLGAAL
                     TVHGAALLMPVIQDKIIIMGFGYSGSLIVWMMLFIYFAGSFFYSLRGVQLLLYPCAAL
                     MLLSGLVFPGKFSGYEITDLPFMLHIGTSLLAYGLFGIATLLSVLTLLLNRSLHRRSF
                     SKLAGFLPSLLSLEKLMFQAMWAGFILLTYSVVSGTFFAEAVFGKPMTFTHKTVFGIL
                     SWLIYGGLLLKHSMTAWRGKKAAVWTIIGFVSLMIAYMGSKFVLEIILKR"
     gene            1039..2409
                     /gene="ffh"
                     /locus_tag="WJJ54_001846"
     CDS             1039..2409
                     /gene="ffh"
                     /locus_tag="WJJ54_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEZ7342661.1"
                     /translation="MLDNLTSRFSNVFKNIRGQAKLTEDNIKEALREVRLALLEADVA
                     LPVVKEFVNNVKEKALGQEVAGSLTPDQAFIGVVNQALVELMGKKNKTLDLSVSPPAI
                     VLMAGLQGAGKTTTVGKLARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFF
                     PSDTNQKPVEIATAAVDYAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVNPVETL
                     FVIDAMLGQDAVNTAQAFNEALPLTGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVG
                     EKINGLEPFHPDRLASRILGMGDVLTLIEDVQKGIDEEAAAKMAKKLHKGKGFDLNDF
                     KEQIQQMRNMGGLENLMSKMPGELGQISKQIPEGTAEKAMGKVEAIINSMTPKERANP
                     ALLKASRKRRIAMGAGTTVQEVNKLLKQFEQMQQMMKMFSGNGLGKLMRMAKGMKGMK
                     GMFPGL"
BASE COUNT          694 a          621 c          643 g          547 t
ORIGIN      
        1 tgttggctct tcttatcttt tcagaatgat ttccaatacg aacttgctgc ccatataggc
       61 aatcatcagg ctgacaaatc cgatgatggt ccacacggcg gcttttttgc cgcgccatgc
      121 ggtcatgctg tgcttgagca gcagtccgcc gtaaatcagc catgacaata tgccgaatac
      181 ggttttatgg gtaaaggtca tgggtttgcc gaatacggct tcggcgaaga atgtgccgct
      241 gacgacggaa taggtcagca ggatgaaacc tgcccacatg gcctggaaca tgagtttttc
      301 caaactgagc agcgacggca ggaatcctgc gagcttggag aagctcctgc ggtgcagact
      361 ccgattcagc agcagggtca aaacggacaa taatgttgct atgccgaaca gcccgtatgc
      421 gagcagcgaa gttccgatat gcagcataaa gggaaggtca gtaatttcat atcccgagaa
      481 ttttccagga aaaaccaaac ctgacagcag catcagtgcg gcgcaaggat acagcagcaa
      541 ctgcactccg cgcagcgaat aaaagaagct gccggcaaaa taaataaaca gcatcatcca
      601 aacaatcagg ctgccggaat acccgaagcc cataatgatg attttgtctt gaatgaccgg
      661 cataagcagt gccgcgccgt ggacggtcaa tgccgcgccc aaaaccggca attccgtctt
      721 ccacgggtaa tcccggccgc gcccctgctg ttggcagtgc catgcaaatg cacccaatcc
      781 tgcgtaaacc gccgtcaaaa agatgaaaac tgtcggcatg gtggactttc tctatctata
      841 ctgttgcgcc gtatgcggcc gcttatgaaa tattggaact tttaacgttg gaattgtaaa
      901 atccccattt cggtcaagcc ttgacggatt tgccgatatg ctgtccggca cacaagccgc
      961 atcaaattat tttgatttta ttttaacaaa gaatgcccct gatggggcaa gctattctta
     1021 ttcagaccaa ggaccagtat gttagacaat ttaaccagcc gcttcagcaa tgtcttcaaa
     1081 aacatccgcg ggcaagccaa actgaccgaa gacaatatta aagaagcctt gcgcgaggtt
     1141 cgtcttgccc tgcttgaggc ggatgtcgcc ctgcctgtcg tcaaagagtt cgtcaacaac
     1201 gtcaaagaaa aggccctcgg tcaggaagtg gcgggcagcc tgacgccgga tcaggcattt
     1261 atcggcgtgg tcaaccaagc cttagtcgaa ctgatgggca agaaaaacaa aacgctggat
     1321 ttgtcggttt caccgcctgc cattgttttg atggccggtt tgcagggcgc aggcaagacg
     1381 acgaccgtcg gcaaactcgc ccgcctgttg aaaaacgatc agaagaaaaa agttttggtg
     1441 gtatcggccg acgtttaccg ccctgccgcg attgagcagc tgcgtctgtt agccgaacag
     1501 gtcggcgtgg attttttccc gtccgatacc aaccaaaaac cggttgagat tgccactgcc
     1561 gccgtcgatt acgccaaaaa acatttttac gatgtcttga tggtcgatac cgccggccgt
     1621 ttggcaatcg atgaagagat gatgaacgaa atcaaagccc ttcacgcggc ggttaacccg
     1681 gtggaaactt tgttcgtcat cgatgcgatg ctgggtcagg atgcggtgaa cactgctcag
     1741 gcatttaatg aagccctgcc gctgaccggt gtcgtattga ccaagatgga cggcgattcg
     1801 cgcggcggcg cagctttgtc cgtgcgccac gtaaccggca aaccgattaa atttatcggt
     1861 gtcggcgaaa aaatcaacgg cctcgaacct ttccaccctg accgtcttgc cagccgtatc
     1921 ctcggtatgg gtgatgtatt gaccttgatt gaagacgttc aaaaaggtat tgatgaagaa
     1981 gccgccgcca aaatggcgaa aaagctgcac aaaggcaaag gcttcgacct caacgacttt
     2041 aaagaacaaa tccagcaaat gcgcaatatg ggcggtttgg aaaacctgat gtcgaaaatg
     2101 ccgggcgaac tgggtcaaat atcgaaacaa attcccgaag gcacggctga aaaagcgatg
     2161 ggcaaagtag aagccatcat caactcgatg acccctaaag aacgcgccaa ccctgccctg
     2221 ctcaaagcca gccgcaaacg ccgtattgca atgggtgcgg gcacaaccgt gcaggaagtg
     2281 aacaaattgc tcaaacagtt tgaacaaatg caacaaatga tgaagatgtt cagcggcaac
     2341 ggcttgggca aactgatgcg tatggcgaaa ggaatgaagg gaatgaaagg aatgttcccg
     2401 ggtttgtaag ccgatttgac cgaaaacgcc gtctaaaatt tcagacggcg tttttgtttt
     2461 atattctgat ttatagtgga ttaacaaaaa tcaggacaag gcggc
//
LOCUS       DAWKJW010000200         2455 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.200, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000200 DAWKJW010000000
VERSION     DAWKJW010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2455
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.200"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(120..1571)
                     /locus_tag="WJJ54_001847"
     CDS             complement(120..1571)
                     /locus_tag="WJJ54_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEZ7342662.1"
                     /translation="MLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIA
                     VGAYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLS
                     AVVRGLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYL
                     LICLISAAVPLFCTLFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIADRPDRLIEN
                     KHGIVAVYHRDGDKVVYGANVYDGAYNTDVFNSVNGIERAYLLPSLKSGIRRIFVVGL
                     STGSWARVLSAIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLR
                     RHPDEKFDLILMNTTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATA
                     VHSIPYAYRYGHMVVGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKV
                     VSRMLIQMTEPSAGAEVITDDNMIVEYKYGRGI"
     gene            complement(1594..2214)
                     /locus_tag="WJJ54_001848"
     CDS             complement(1594..2214)
                     /locus_tag="WJJ54_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEZ7342663.1"
                     /translation="MNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSS
                     ITVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSRSLISGLGHL
                     LVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGTLYFFNTLGAA
                     LGSLAAAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH"
BASE COUNT          770 a          579 c          574 g          532 t
ORIGIN      
        1 aggaataaga attcgggaca aaatgtttaa accattttgt cccgactgct gtgatgcggt
       61 ttttttgaac tagcaggacg ttacctaaaa cctgcgttgc ctgaaaccct ttaagacggt
      121 taaatccctc tgccgtattt gtattctaca atcatattat cgtcggtaat gacttccgcc
      181 ccagccgaag gttccgtcat ctgaatcagc atacgagaga caaccttttg tgctgcagca
      241 tccacggtgc tgctgtcaaa tacgtgcctg ccgctttccg gccaaatcaa ccgggagaga
      301 cgttgcttga gcagttcttt attagggaaa actaccgggg ttgccgagcc gactaccata
      361 tgcccatagc ggtatgcata gggaatactg tgtacggcgg tagcaaaagc atgcgggctg
      421 tgcgtggtat taaacattac aataccatcc ggggtaaggt ggctttgcac ctgttttaaa
      481 aattccgcac tcaacaggtt ggtggaatag gcacgccagt accaagtcgt attcatcaaa
      541 atcaggtcga atttttcatc aggatggcga cgcagccatt tcctaccgtc atccaataca
      601 atttcaacac gtttgtcctg caaaagcggg gcgatttgcg gctcgtccgc gataaggcta
      661 cggtatgccg gattgatttc cgcaacaatc atcgactgca tttccggaat ggcagacaag
      721 acgcgcgccc acgaacctgt actcaatcca acgacgaaaa tgcggcgtat gccagacttc
      781 agggagggta gcagataggc acgttcgatg ccgttgacac tattgaatac atcggtattg
      841 tatgcgccgt cgtatacatt cgccccataa acaaccttat caccatctct atggtaaacc
      901 gcaacaatgc cgtgtttgtt ttcaatcagc cgatccggac ggtcagcaat attttgaaag
      961 acagaatccg gcagtaggaa catgaggatg ccgaacatta gggaaactgc taccgacact
     1021 gcattcagtc ggagactttt ttggaacagt gtacaaaaca aagggacagc agcagaaatc
     1081 aaacagatga gcaggtaaat ctgttgggtg gacaagaaat caagtatcac aaagccgata
     1141 aggaccggac ccaatgcact gccggcaacg ttggcgaaat aaacattgga aacctgtcgt
     1201 ccggatttgt tgccatccgt acccacatgg tgtacgagcg ggaaaatcaa ccctctgacg
     1261 acggcagaca gggtaatgaa gataccggcg tggtggacga agccggaaaa acccgtcaac
     1321 aaccacgcag cacccaaaat caaaaagtcg gcaatacccg cccacaagaa gcactgcccg
     1381 ataaagggaa tatcaacaaa gcggctgcgg caaatccgtt tgccaaaata cgcgccgacg
     1441 gcgataccgg tcagaaaaca ggcaagagta aatgaaaatg cctgaggcac ggactgtgct
     1501 gcgaacgaaa acatccttac ccacaagact tctataccca agctcaataa gccgctaagg
     1561 aaagaaagca tataaatcaa actagtattc ggtttagtgt tcactatatc catcctttct
     1621 gtaacgcagc catactgaag cagcaatcag aaggttaaag caggctgtca gcgcaatggt
     1681 ttgggagagg gtaaaaaaga cgtagaaaaa ttcggcggcg gcaagcgatc cgagtgccgc
     1741 acccaaagtg ttgaaaaaat ataaggtacc gatagactcg ccaacattat gtattttccg
     1801 gttaaaaaaa caggtcagca agggcaaggt cgcgcccatc ataaaggtag gaagcagcaa
     1861 taagaggaaa ttggcagcag cgatgatggg caaatcagcc tcaactaaaa gatgccccaa
     1921 gccggaaatc agactcctgc ttaccaaacc gaacagaccg atggatactt cagcgatgca
     1981 aaacaggggg atgatacttg aaggaaaacg gtcagcaatg cgtccaccga aatacgcacc
     2041 tacacccaag ccgaccataa atacagaaat aatgacagta atcgaactca aatcgatacc
     2101 tatgtgactg aatagaagcc tctgccagct gacctggtaa atcagggcgc agaagccaga
     2161 ggcgaaaaac accagcgaca atcctttcag ggttttactt gcggtcgaat tcatattttc
     2221 tattttcaaa taggcggaac tataaatgaa atgtatcaat gtgtaaacat ttgtattaac
     2281 cgtaggaaat caccgtattg ctcaaactgc aggccgggaa aataaactcg taagcccgca
     2341 aacggcgtat cactgttcaa actgctgtgc ggcttcacgg tgttataaaa ataatggggc
     2401 tgtcctggac aactaagata aactcgattt tactaattgt tttaaaatgg aaatt
//
LOCUS       DAWKJW010000201         2450 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.201, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000201 DAWKJW010000000
VERSION     DAWKJW010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.201"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            26..568
                     /locus_tag="WJJ54_001849"
     CDS             26..568
                     /locus_tag="WJJ54_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ7342664.1"
                     /translation="MQSWKERRDFNIVKQDLDFSCGAASVATLLNNFYGQKLTEEDVL
                     KKLDKEQMPASFEDMRRIMPDLGFEAKGYALSFEQLAQLQIPVIVYLKYRKDDHFSVL
                     RGIDGNTVLLADPSLGHVSMSRAQFLDAWQTREGNLAGKILAVVPKGRDAGGDKAFFT
                     RSPKRQTEFAVGQVKWWRAY"
     gene            698..2359
                     /locus_tag="WJJ54_001850"
     CDS             698..2359
                     /locus_tag="WJJ54_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HEZ7342665.1"
                     /translation="MTESITRDSMQYDVVIVGAGPSGLSAAIKLKQLAEQNGREISVC
                     VVEKGSEAGAHSLAGAVIDPIALNELIPDWKEKGAPLTRTVTQDKVLFLTEKKAFNLP
                     ITPNFDNHGNYIVSLGEVVRWLAEQAENMGVEIYPGFAAAEVLYHEDGSVKGIATGNM
                     GIGKDGEPTDSFQPGMELWAQQTLFAEGCRGSLSKQIIERFKLDQNSQPQTYGLGIKE
                     VWEVPSEQHQPGLVVHSAGWPLDSKTYGGAFVYHFDDNKVAVGFVVGLDYQNPYLSPF
                     EEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGLQSLPKLSFKGGILVGDAAGFLNMP
                     RIKGIHTAMKSAMLAAEAVFPLLENLEEVEGFDSGKEAADYQQRFEQSWLYQELYAAR
                     NVRPSFKWGVYLGSLYTGIDQMIFRGKAPWTLKHHGKDNEQLKKAAACKPIAYPKPDG
                     VLTFDRLSSVFLANLAHEENQPDHLVLNNPQTMINVNYKEYASPETRYCPAGVYEIIE
                     ENGNPRLQINAANCVHCKTCDIKDPTQNITWICPEGASGPNYGGM"
BASE COUNT          619 a          600 c          681 g          550 t
ORIGIN      
        1 tcctgttgct tatggaaaaa tcaaagtgca gagttggaaa gagaggcgcg atttcaatat
       61 tgtaaagcag gatttggatt tttcctgcgg ggcggcttcg gtggcgacgc ttttgaacaa
      121 tttttacggg caaaagctga cggaagagga cgtgttaaaa aaactggata aggagcagat
      181 gcccgcgtcg tttgaggata tgcggcgcat tatgcctgat ttgggttttg aagcgaaagg
      241 ctatgccctg tctttcgagc agcttgcaca gttgcaaatc cccgtcatcg tgtatctgaa
      301 ataccgcaag gatgatcatt tctcggtatt gcgcggtata gacggcaata cggttttgct
      361 tgccgacccg tcgctgggtc atgtttcgat gagcagggcg cagtttttgg atgcttggca
      421 aacccgtgag ggaaatttgg caggtaagat tttggcggtt gtgccgaaag ggagggatgc
      481 cggcggggat aaggcgtttt tcacacgcag tccgaaacgt cagacggagt ttgcggtcgg
      541 acaggtaaaa tggtggcgtg cttattgaaa tttcgacaaa ggtcgtctga aaaccgaaaa
      601 tatggttttc agacgacctt tgttgtattt ggtaactata tgttcccgtt gtataattac
      661 ggatttgcaa ttcaataata aatacacagg aaccgccatg acagaatcca tcacccgcga
      721 cagtatgcaa tacgatgtcg tgattgtcgg cgcaggccca tcgggtttgt ccgccgccat
      781 caaactcaag cagcttgccg aacagaacgg gcgcgaaatc agcgtttgcg tggtggagaa
      841 aggttcggag gcgggtgcac attcgctggc gggcgcggtt atcgatccga ttgcgctgaa
      901 tgagttgatt cccgactgga aagaaaaagg cgcgccgctg acgcgtacgg taacgcagga
      961 caaagtgttg ttcctgactg agaaaaaagc gttcaatctg cctattaccc caaatttcga
     1021 caatcacggc aactacatcg tcagcttggg cgaagtcgtg cgctggttgg cggagcaggc
     1081 ggaaaatatg ggcgtggaaa tctatccggg ctttgccgcc gccgaagtgc tgtatcacga
     1141 agacggttcg gtcaaaggca ttgcaaccgg caatatgggc attggcaaag acggcgagcc
     1201 gaccgattca ttccaacccg gcatggagct ttgggcgcag caaaccctgt ttgccgaagg
     1261 ttgtcgcggt tcgctttcca aacaaatcat cgaacgcttc aaactcgacc aaaacagcca
     1321 gccgcaaact tacggcttgg gcattaaaga agtttgggaa gtgccgtccg aacagcatca
     1381 gcccggtttg gtggtgcaca gcgcaggctg gccgctggac agcaaaacct acggcggcgc
     1441 gtttgtttac catttcgatg acaacaaagt cgccgtcggc ttcgtggtcg gtttggacta
     1501 tcaaaatcct tatctgtcgc cgtttgaaga gttccaacgt ttcaaaaccc atcccgaaat
     1561 ccgcaaaacc tttgaaggcg gccgccgcat tgcttacggc gcgcgttcgc tgattgaagg
     1621 cggtttgcaa agcctgccga aactctcgtt caaagggggc attttggtcg gcgatgcggc
     1681 gggtttcctc aatatgccgc gcatcaaagg cattcatacc gcgatgaaat ccgccatgct
     1741 cgccgccgaa gccgtgttcc ccttgttgga aaaccttgaa gaagtggagg gtttcgacag
     1801 cggcaaagag gcggcggatt atcagcaacg ttttgaacaa agctggctgt atcaagagct
     1861 ttacgccgcg cgcaacgtcc gtccgtcatt caaatggggc gtttacctcg gctcgcttta
     1921 taccggcatc gaccagatga ttttcagagg caaagccccg tggaccttga aacatcacgg
     1981 taaagacaac gagcagctca aaaaagccgc cgcgtgcaag ccgattgctt atccgaaacc
     2041 cgatggcgtg ttgaccttcg accgcttgag cagcgtcttc cttgccaatc tcgcgcacga
     2101 agaaaaccag cccgaccatt tggtgctgaa caatccgcaa acgatgataa acgtgaacta
     2161 caaagaatac gcctcgcccg aaacgcgcta ttgtccggcg ggtgtgtacg aaattattga
     2221 agaaaacggc aatccgcgcc tgcaaatcaa cgcggcaaac tgcgtgcact gcaaaacctg
     2281 cgacatcaaa gacccgacgc aaaacatcac ttggatttgc cccgaaggcg cgagcgggcc
     2341 gaattacggc gggatgtaaa ccttattccg ccgttacgcc cggtcaggaa taaggaatgg
     2401 ggcagttgtt caaacctgcc ccgtttgaac ccataatata gtggattaaa
//
LOCUS       DAWKJW010000202         2441 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.202, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000202 DAWKJW010000000
VERSION     DAWKJW010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.202"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            35..1390
                     /locus_tag="WJJ54_001851"
     CDS             35..1390
                     /locus_tag="WJJ54_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
                     /protein_id="HEZ7342666.1"
                     /translation="MSEYTPQTAKQGLPALAKSTIWMLSFGFLGVQTAFTLQSSQMSR
                     IFQTLGADPHNLGWFFILPPLAGMLVQPIVGHYSDRTWKPRLGGRRLPYLLYGTLIAV
                     IVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAMQPFKMMVGDMVNEEQKGY
                     AYGIQSFLANTGAVVAAILPFVFAYIGLANTAEKGVVPQTVVVAFYVGAALLVITSAF
                     TIFKVKEYDPETYARYHGIDVAANQEKANWIELLKTAPKAFWTVTLVQFFCWFAFQYM
                     WTYSAGAIAENVWHTTDASSVGYQEAGNWYGVLAAVQSVAAVICSFVLAKVPNKYHKA
                     GYFGCLALGALGFFSVFFIGNQYALVLSYTLIGIAWAGIITYPLTIVTNALSGKHMGT
                     YLGLFNGSICMPQIVASLLSFVLFPMLGGLQATMFLVGGVVLLLGAFSVFLIKETHGG
                     V"
     gene            1394..2413
                     /locus_tag="WJJ54_001852"
     CDS             1394..2413
                     /locus_tag="WJJ54_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HEZ7342667.1"
                     /translation="MSDTPATPATRDFGLIDGRAVTSYVLSNRRGTRVCVLDLGGIVQ
                     EFSVLADGVRENLVVSFDDAASYADNPFQINKQIGRVAGRIRGAAFDINGRTYRVEAN
                     EGRNALHGGSHGLAVTRFNAVAADGRSVVLRSRLQQSADGYPNDLDLDISYRLDEDDR
                     LTVSYRATALGDTVFDPTLHIYWRLDAGLHDAVLHIPQGGHIPADAEKLPVSTVSDGL
                     EVFDFSRPKPLDAAVAALRRETGRAGFDDAYRVPSDIGRPAAVLQAGRRRRISIYSDR
                     NGLVIFTAAPQDFARHDAGVYDALATEAQTLPDSLHWPEFGNIRLNKGDTREATIAYG
                     IESLS"
BASE COUNT          445 a          668 c          737 g          591 t
ORIGIN      
        1 actatacttt tcaaatcaaa aaaggattta ccttatgtcg gaatatacgc ctcaaacagc
       61 aaaacaaggt ttgcccgcgc tggcaaaaag cacgatttgg atgctcagtt tcggctttct
      121 cggcgttcag acggccttta ccctgcaaag ctcgcaaatg agccgcattt ttcaaacgct
      181 aggcgcagac ccgcacaatt tgggctggtt tttcatcctg ccgccgctgg cggggatgct
      241 ggtgcagccg attgtcggcc attactccga ccgcacttgg aagccgcgtt tgggcggccg
      301 ccgtctgccg tatctgcttt atggcacgct gattgcggtt attgtgatga ttttgatgcc
      361 gaactcgggc agcttcggtt tcggctatgc gtcgctggcg gctttgtcgt tcggcgcgct
      421 gatgattgcg ctgttggacg tgtcgtcaaa tatggcgatg cagccgttta agatgatggt
      481 cggcgacatg gtcaacgagg agcagaaagg ctacgcctac gggattcaaa gtttcttagc
      541 aaatacgggc gcggtcgtgg cggcgattct gccgtttgtg tttgcgtata tcggtttggc
      601 gaacaccgcc gagaaaggcg ttgtgccgca gaccgtggtc gtggcgtttt atgtgggtgc
      661 ggcgttgctg gtgattacca gcgcgttcac gattttcaaa gtgaaggaat acgatccgga
      721 aacctacgcc cgttaccacg gcatcgatgt cgccgcgaat caggaaaaag ccaactggat
      781 cgaactcttg aaaaccgcgc ctaaggcgtt ttggacggtt actttggtgc aattcttctg
      841 ctggttcgcc ttccaatata tgtggactta ctcggcaggc gcgattgcgg aaaacgtctg
      901 gcacaccacc gatgcgtctt ccgtaggtta ccaagaagcg ggcaactggt acggcgtttt
      961 ggcggcggtg cagtcggttg cggcggtgat ttgttcgttt gtattggcga aagtgccgaa
     1021 taaataccat aaggcgggtt atttcggctg tttggctttg ggcgcgctcg gctttttctc
     1081 cgttttcttc atcggcaacc aatacgcgct ggtgttgtct tataccttaa tcggcatcgc
     1141 ttgggcgggc attatcactt atccgctgac gattgtgacc aacgccttgt cgggcaagca
     1201 tatgggcact tacttgggcc tgtttaacgg ctctatctgt atgcctcaaa tcgtcgcttc
     1261 gctgttgagt ttcgtgcttt tccctatgct gggcggcttg caggccacta tgttcttggt
     1321 agggggcgtc gtcctgctgc tgggcgcgtt ttccgtgttc ctgattaaag aaacacacgg
     1381 cggggtttga gcgatgagcg atacccccgc tacccccgct acccgcgatt tcggcctgat
     1441 cgacgggcgt gccgtaacca gctatgtgct gtccaatcgg cgtggtacgc gtgtctgcgt
     1501 gctggacttg ggcgggattg tgcaggaatt ttccgttttg gcagacggcg tgcgcgaaaa
     1561 cctcgtggtg tcgttcgacg atgcggcttc ctatgcggac aatccgtttc agattaacaa
     1621 gcagataggg cgcgtggccg gacgcatccg cggtgcggcg ttcgacatca acggcaggac
     1681 ttaccgcgtg gaggccaacg aaggcaggaa cgcgctgcac ggcggttcgc acgggctggc
     1741 cgttacccgt ttcaacgcgg tggcggcaga cggccgttcg gtggtgctgc gcagccgcct
     1801 gcaacagtcg gccgacggtt atcccaacga tttggatttg gatatttcct accgcttgga
     1861 cgaggacgac cggcttaccg ttagctatcg cgccaccgcg ctcggcgaca cggtgttcga
     1921 cccgacgctg cacatttact ggcggctgga cgcgggcctg cacgatgcgg ttctgcatat
     1981 tccgcagggc ggacatattc cggccgatgc cgaaaaactg cccgtctcaa cggtttcaga
     2041 cggcctcgaa gtatttgatt tcagccggcc caagccgctg gatgccgccg ttgccgccct
     2101 gcgccgcgaa acgggccggg ccggttttga cgacgcttac cgcgtgccgt ccgatatagg
     2161 ccgtcccgcc gctgtgttgc aagccggacg ccgccgtcgt atcagcatat acagcgaccg
     2221 caacggcttg gtcatcttta ccgccgcccc gcaggatttc gcgcggcacg atgcgggcgt
     2281 ttacgacgcg ctggcgaccg aggcgcagac gctgcccgac agcctgcatt ggcccgagtt
     2341 cggcaatatt cgtctgaaca agggtgatac cagggaggcg acgattgctt acggcatcga
     2401 atccctttct taggagcttc ctaacaccgg ttgcagacga c
//
LOCUS       DAWKJW010000203         2432 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.203, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000203 DAWKJW010000000
VERSION     DAWKJW010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.203"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(227..1861)
                     /gene="groL"
                     /locus_tag="WJJ54_001853"
     CDS             complement(227..1861)
                     /gene="groL"
                     /locus_tag="WJJ54_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271863.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEZ7342668.1"
                     /translation="MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAF
                     GGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAE
                     GMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGA
                     IIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAGLDNP
                     FVLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAV
                     KAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLEKATLDDLGQAKRIEIGKENTTIID
                     GFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESP
                     LRQIVANAGGEPSVVVNKVLEGKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAA
                     SIAGLMLTTDCMIAEIPEDKPAMPDMGGMGGMGGMM"
     gene            complement(1954..2244)
                     /locus_tag="WJJ54_001854"
     CDS             complement(1954..2244)
                     /locus_tag="WJJ54_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEZ7342669.1"
                     /translation="MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVG
                     AGKIGKDGARRPLDVKVGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVEK"
BASE COUNT          478 a          646 c          642 g          666 t
ORIGIN      
        1 ttcgcgggaa tgacggcgga aaggttgctg tttttccgat aaattcctgc cgctcttcgt
       61 ttttgggatg gcgggaaata aaacaaaagc gcgcgtatca aaaaataaca atgcaaagaa
      121 cggtgttggc aattttaagg tttgcgcctt agccgcactt attcgcaaaa aaaccgcacg
      181 gcgttgaccg tgcggcttgt tgtctgaagg cttcagacgg cattgcttac atcatgccgc
      241 ccataccacc catgccgccc atatcaggca tagccggttt gtcttcaggg atttcagcaa
      301 tcatgcagtc tgtggtcagc atcaggccgg cgatagacgc ggcgtgttgc agcgcggaac
      361 gggttacttt ggcggggtcg agtacgccca tttcgatcat gtcgccgtat tcgccgctgc
      421 cagcgttgta accatagttg cctttgcctt ccaacacttt gttcacaacc acgctgggtt
      481 cgccgcctgc gttggcaacg atttggcgca gcggagactc aacggcgcgc aagacgattt
      541 gtacgcctgc gtcttggtct gcattgccgg tgtgcaggtt ttccagagcg gcacgggcgc
      601 gcaacagggc tacgccgccg cctgcaacca cgccttcttc aacggctgcg cgggtagcgt
      661 gcagcgcgtc ttccacgcgg tcttttttct ctttcatttc cacttcggtc gcggcaccga
      721 ctttgattac tgccacgccg cctgccagtt tggcaacgcg ctcttgcagt ttttctttgt
      781 cgtaatcgct ggttgcggtt tcgatttgtt ggcggatttc ggcaacacgc gcttcgattt
      841 gggctgcgtc gccgaagccg tcgatgatgg tggtgttttc tttaccgatt tcgatgcgtt
      901 tggcctgacc caagtcgtcc aaagtcgctt tttccaaaga caggccgact tcttcggaaa
      961 tcactgtgcc gccggtcagg atagcgatgt cttgcagcat cgctttgcgg cggtcgccga
     1021 agcccggagc tttaacggca acggttttca gaatgccgcg gatgttgttc acgaccaaag
     1081 tcgccaaggc ttcgccttct acgtcttcag cgataatcaa cagcggacgg ctggctttgg
     1141 ccacttgttc caaaacaggc agcaggtcgc ggatattgct gatttttttg tcgaacagca
     1201 atacaaacgg attgtccaag ccggcgattt gtttttccgc atcgttgatg aagtaaggag
     1261 acaggtagcc gcggtcgaat tgcatacctt caaccacgtc cagctcgttt tccaaagatt
     1321 tgccgtcttc aacggtaatc acgccttctt tgccgacttt ttccatcgct tcggcaataa
     1381 tcgcgccgac ttgttcgtca gagttggcgg aaatagagcc gacttgggcg atttctttag
     1441 aagtgtcgca aggtttggcg atgtttttca gctcttcaac caaagcggcg acggctttgt
     1501 cgataccgcg tttcaggtcg gtcgggttca taccggcggt aacgtatttc ataccttcgg
     1561 caacgatgga ttgcgccaat acggtggcgg tagtcgtacc gtcgcccgcc acgtcgttgg
     1621 ttttggacgc gacttctttc accatttgcg cgcccatatt ttcaaacttg tctttcagtt
     1681 cgatttcttt ggcgacggtt acgccgtctt tggtgatgtg cgggccgccg aaagcgcggt
     1741 caaccaccac gttgcggcct ttgggaccca aggttacgcg cacggcgttt gccaaaatgt
     1801 tcacgccgtt taccattttt tggcggactt cattgccgaa ttgtacgtct tttgctgcca
     1861 tttcaattct ccaaaaatca ttaaaactgt ctgataaaac cgtttatgcc gtctgaaggc
     1921 ggtttgccgt ttcagacggc atcgtgtccg tatttatttt tcaacgatgc cgaaaatatc
     1981 ttcttcgcgc attaccaaca gctcttcgcc gtcggctttt acggtttggc cgctgtattt
     2041 gccgaagatg attttgtcgc cgactttgac atccagcgga cggcgcgcgc cgtctttacc
     2101 gattttgccc gcgcccacgg cgatgacttc gcccatgtcg ggtttttcgg cggccgcacc
     2161 cggcaaaacg atgcccgatg cggttttttc ttcagcttcc aagcgtttga cgacaacgcg
     2221 gtcgtgtaaa ggacggatgg tcatatttat gctccgataa aatgatttga aaacaatcat
     2281 ctgcccgaac ggttcggaca gattgaagtg gaaaccgggc tgccgcctgc cggcccgccc
     2341 gtataagtcg gcaaaattag ggtgtgtgcg ggtaaattca agtgaggcgg aaaaaaattt
     2401 atttccgccg ttttttatag tggactaaat tt
//
LOCUS       DAWKJW010000204         2365 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.204, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000204 DAWKJW010000000
VERSION     DAWKJW010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2365
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.204"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            123..2141
                     /gene="uvrB"
                     /locus_tag="WJJ54_001855"
     CDS             123..2141
                     /gene="uvrB"
                     /locus_tag="WJJ54_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HEZ7342670.1"
                     /translation="MEVIQYPNSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLL
                     GVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYY
                     QPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEY
                     QQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENAL
                     RISLFDDEIDRLDMFDPLSGSLHQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRER
                     IDFFTKENRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDY
                     LPDNAIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVM
                     PQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEINDRIQK
                     GERVLVTTLTKRMAEQLTDYYSELGIKGRYLHSDIDTVERVEIIRDLRLGLFDVLVGI
                     NLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYADKITDSM
                     KAAIDETERRREKQIKFNEEHGIVPQQIKKQVKDIIDGVYHEEDSGKGRLKGKNKVKV
                     GEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAVLRDRIRGIKENLLF"
BASE COUNT          665 a          682 c          529 g          489 t
ORIGIN      
        1 tgggtagcga ttgggtttca gacggcatac attcaggatt tcaccgcctt atgccgtctg
       61 aaagacgttt ccgacccatc cctactacac actttgtccg caaacgcatc acaggcaaga
      121 ttatggaagt tatccaatac ccaaattccc ccttcaaact ccaccaaccc ttcccgcccg
      181 caggcgacca gcccaccgct attgccggct tgctcgaagg gctttcagac ggccttgcct
      241 accaaaccct gctcggcgta accggttcgg gcaaaaccta caccatggcg aacgtcatcg
      301 cccaaagcgg ccgacccgcc atcatcatgg cgcacaacaa aacccttgcc gcccagcttt
      361 atgccgaaat gcgcgagttt ttccctgaaa acgcggtgga atatttcgtc tcctactacg
      421 actattacca acccgaagcc tatgtgccaa gccgcgattt gttcatcgaa aaagacagtg
      481 cgatcaacga acacattgaa caaatgcgcc tttctgccac caaaaacctg atgacgcgcg
      541 atgacgtgat tatcgttgcc actgtgtccg ccatttacgg tatcggcgac ccgactgagt
      601 atcaacaaat ggtgttgtcc gtcaaagaag gcgacaccat cgagcagcgc gacatcatcg
      661 ccacgctcgt ttccatgcag tacgaacgcg gcgatttgga tttcaaacgc ggcagcttcc
      721 gcgtgcgcgg cgacgtgatt gacgtgtacc ccgccgaaag ctccgaaaac gccttgcgta
      781 tcagcctgtt tgacgacgaa atcgaccgcc tcgatatgtt cgacccgctt tcaggcagcc
      841 tgcaccaacg cgtcggccgc tacaccgtct tcccgtccag ccactacgtt accccgcgcg
      901 acaccgtatt gcgcgcctgc gagtccatca aagaagaatt gcgcgaacgc attgatttct
      961 ttaccaaaga aaaccgtccc gtcgagcaac aacgcatcga acagcgcacc cgtttcgacc
     1021 tcgaaatgct ctacgaaatg ggcttctgca aaggtatcga aaactactcc cgtcacttct
     1081 ccggcaaaaa agaaggcgaa ccgccgccca cgctgatgga ctacctgccc gacaacgcca
     1141 tcatgttcat cgacgaaagc cacgttaccg tcacacaaat cggcggcatg tacaaaggcg
     1201 acgcatcgcg caagcaaaac ctcgtcgatt acggcttccg cctaccttcc gcccgcgaca
     1261 accgcccgct caaattccac gaatttgaaa aagtcatgcc gcaaaccgtc ttcgtttccg
     1321 ccacccccgc caaatacgaa gaagaacacg ccggacaagt ggtcgaacaa gtcgtccgcc
     1381 ccacagggct ggtcgaccct caaatcatca tccgccccgt cgccacccaa gttgatgact
     1441 taatgagcga aatcaacgac cgcatccaaa aaggcgaacg cgtactcgtt accaccctta
     1501 ccaaacgcat ggcggagcaa ctcaccgact attacagcga actcggcatc aaagggcgct
     1561 acctgcacag cgacatcgac accgtagagc gcgttgaaat tattagagat ttacggctcg
     1621 gattgtttga cgtactcgtc ggcatcaacc tcttgcgcga aggcttggac atccccgaag
     1681 tctccctcgt cgccatcctc gacgccgaca aagaaggctt cctgcgctcc caccgcagcc
     1741 tgattcaaac cataggccgc gccgcgcgca acgtgaacgg cgtcgcgatt ctgtacgccg
     1801 acaaaatcac cgactctatg aaagccgcca tcgacgaaac cgaacgccgc cgcgaaaaac
     1861 agattaaatt caacgaagaa cacggcatcg tgccgcagca gattaaaaaa caagtcaaag
     1921 acatcatcga cggcgtgtac cacgaagaag acagcggcaa aggtcgtctg aaaggcaaaa
     1981 acaaggttaa agtcggcgaa atccacaacg aagaagacgc aattaaagaa atcgccaaac
     2041 tggaaaaagc catgcagcag gcggctaggg atttgcagtt tgaagaggcg gctgtgttgc
     2101 gggataggat tcgggggatt aaggagaatt tattatttta ggatgtaaaa aatgattaag
     2161 atgaaagata tttatgagtc aatttgttgt aaatctatta gaaagataat gtatatatca
     2221 gatagttttg tagctatttc aggaacgggg tttattatta aatttcagga aaaattttat
     2281 ttttgctgtt tatatcattg catgtctaat gaaggaaaat ttgaaaaaaa taaattgttt
     2341 gggttaagta ttttatataa aacat
//
LOCUS       DAWKJW010000205         2334 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.205, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000205 DAWKJW010000000
VERSION     DAWKJW010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.205"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(80..1489)
                     /gene="dacB"
                     /locus_tag="WJJ54_001856"
     CDS             complement(80..1489)
                     /gene="dacB"
                     /locus_tag="WJJ54_001856"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEZ7342671.1"
                     /translation="MNFPKTAASLLLLLASLAAHALDTGRIPQNEIAVYVQELDSGKV
                     IIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTINDGTLDGNLYWAGS
                     GDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEVGSPDDFEADSGSPFMTPPN
                     PTMLSAGMVMVRAERNAADSTDILTDPPLPHIFAQNNLKITASQAACPSIKKLMRASF
                     SDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNHWLLGGGRISDGIGIADTPEG
                     AQTLAVAHAKPMKEILTDMNKRSDNLIARSVFLKLGGDGKLPAVSEQAASAVRRELAV
                     SGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGTDGTLRN
                     RFKQSGGLLRLKTGTLNNVRALAGYWLGDKPMVVVVIINSGRAVSLLPDLDNFVANNI
                     ISGGDGWLDAKLMCKERRA"
     gene            1654..2220
                     /locus_tag="WJJ54_001857"
     CDS             1654..2220
                     /locus_tag="WJJ54_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ7342672.1"
                     /translation="MAKKISILVGSLRRASFARKVALNAAEMFPEGWQAEIVEIGHLP
                     LYNFDYDDPAVEDVPLPESYTVFRETIKASDGILFVTSENNRTIPACLKNAVDIGSKP
                     NADVAWKNKPAGIISHSVGKMGGYSSQKNLRLALSYFDMPVTGQPEVFLGNSPTLFDE
                     NGKLIDSARDFVQSYINQFVGLIERNAK"
BASE COUNT          538 a          567 c          668 g          561 t
ORIGIN      
        1 ttaaaacaat tagtaaaatc gagtttatcc tagttatcta ggacagcccc ttaaatttaa
       61 tccactatat tttcctgttt caggctcggc gttctttgca catcagtttc gcatccagcc
      121 agccatcgcc gccggagatg atgttgttgg caacgaagtt gtccaagtcg ggcagcaggg
      181 aaacggcgcg accgctgttg atgatgacga ccaccaccat cggtttgtcg cccagccagt
      241 agcctgccaa tgcgcggaca ttgttgagcg tgccggtttt caggcgcaga agcccaccgc
      301 tttgtttgaa gcggttgcgt aaagttccgt ctgtgccggc gatgggcagc gtgtcgatga
      361 aatcttgtgc aaacgggctg aaataagccg tttccaacat ttgcgccatc attctcgccg
      421 ttaccctttc ttttctagac agacccgaac cgttttccaa aaccaaatcc gcaacatcga
      481 tgcccgacac ggcaagttcg cgccggacgg cagacgctgc ctgttcggaa acggcgggca
      541 gtttgccgtc gccgccgagt ttgaggaaga cggaacgcgc aattagattg tccgaacgct
      601 tgttcatgtc cgtcaaaatt tccttcatcg gtttggcgtg tgcaacggca agcgtctgcg
      661 cgccttccgg cgtgtcggct atgccgatac cgtctgaaat ccgtccgccg ccgagcagcc
      721 agtggttggt aaaactttgc cggatcagtt cgtcaagcgc gaacatccgg acaccgacag
      781 gcttgcccaa acagctctcg ggaatattgc cgcgcaattt cagcgtattg tccgaaaaag
      841 atgcacgcat cagttttttg atcgaagggc aggcagcttg ggaggcggta attttcaagt
      901 tgttttgggc gaaaatatgc ggcaaaggcg gatcggtgag gatgtcggta ctgtcggcgg
      961 cattgcgttc ggcgcgcacc ataaccatac cggcagacag catagttgga ttggggggcg
     1021 tcataaacgg cgaaccgctg tcggcttcga aatcgtcggg gctgccgact tcgccccaca
     1081 ggctgtggtc gagcatcagg tgtcccgtga tattgcgtat gccttgttcg cgcaactggc
     1141 gttggacggc aagcaggttt tcctgattga aaacggggtc gccgctgccc gcccaataca
     1201 ggtttccgtc aagcgtgccg tcgtttatcg taccgttgct tttaaactcg gtcgcccagc
     1261 ggtaattgct gccgaaggtt ttgaaggcgg caaacgcggt aacgagtttc attgtggagg
     1321 cggggttgac ggggacatcc gagcggtggt caatgatgac ttttccgctg tcaagctctt
     1381 ggacatatac ggcgatttcg ttttgcggaa tgcggccggt atcgagcgcg tgtgcggcga
     1441 gggaggcgag aagcagcagc agggaggccg ctgttttggg gaaattcata ggtaaatctg
     1501 ttacataaaa aaagcaatta taaggcaaag ccggataagt gggaacgctg tggcggcggg
     1561 ccggcttgtt tgcaggggaa atcacatata taataatcgc tatcattatg aaatgattga
     1621 gacgcacaaa cttaatattc aggaggaatg attatggcta agaaaatcag tattttggtg
     1681 ggcagcctgc gccgtgcttc ttttgcgcgc aaagtggcat tgaatgcggc ggagatgttc
     1741 cccgaaggct ggcaggcgga aatcgtcgaa atcggacatc tgccgcttta caatttcgat
     1801 tatgacgacc ctgcggtgga agatgtgccg ctgcccgaaa gctacacggt tttccgcgaa
     1861 acgattaagg cttcggacgg cattttgttc gttacgtccg aaaataaccg caccattccc
     1921 gcctgtttga aaaatgcggt ggacatcggc tcgaaaccga atgccgacgt ggcgtggaaa
     1981 aacaaaccgg ccggcatcat cagccattcc gtcggcaaga tgggcggtta cagttcgcaa
     2041 aaaaacctgc gccttgcgct gtcttatttc gatatgcccg taaccggaca gccggaagtg
     2101 tttttgggca attcgccgac actgtttgat gaaaacggca aattgatcga ctcggcaagg
     2161 gattttgttc agtcatatat taatcagttt gtcggtttga ttgaaagaaa tgccaaataa
     2221 acaaacaagt cgaaaggccg caaaaccggt tcgggttttg cggctttttt atatgggctg
     2281 ggcagcgtca aggtttgccg tttgccggat aatgcgcggc aaatgaccgg cgtg
//
LOCUS       DAWKJW010000206         2333 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.206, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000206 DAWKJW010000000
VERSION     DAWKJW010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.206"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            31..1248
                     /locus_tag="WJJ54_001858"
     CDS             31..1248
                     /locus_tag="WJJ54_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ7342673.1"
                     /translation="MTHTASKTPKFWLTITAAAFILLITIGMRMTLGLFVQPVVNTTE
                     LSIAQFSLIIAVFQLMWGISQPLSGALADRFGAFRVLSGGAVLLVCACLIAPNIPTYW
                     GLMIAVGLLLAFGTGSGGFSIIMGQVAAQVPAHKRGLASGLVNAGGSAGQFLFAPLVQ
                     GLVVLPEVGWTGTFYVWGAIALLILPVSWWLAGGNNAAHTQHAQATHGQSLGEAVKTA
                     FKTPSYILLHLSFFACGFHIAFLVTHLPTEVALCGLPATVASTSIAIIGLANIAGCIF
                     SGWCTSRVRGKYVLFGLYASRAAMILIYIFSPKTDLNFYIFAAALGFTWLATVTPTAS
                     ITGKLFGTRYLATLFGLTMLSHQIGGFLGSYIGGIVITQFGDYGWMWYADALLAGTAA
                     LLNLPIREPRTAA"
     gene            complement(1451..1591)
                     /locus_tag="WJJ54_001859"
     CDS             complement(1451..1591)
                     /locus_tag="WJJ54_001859"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342674.1"
                     /translation="MNYRIGNAVCIDEMPDTGRGGQTFAKRTASDASPARAGAASDGI
                     LS"
     gene            1604..>2333
                     /locus_tag="WJJ54_001860"
     CDS             1604..>2333
                     /locus_tag="WJJ54_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEZ7342675.1"
                     /translation="MKIVFITTVASSIYGFRAPVIKKLIGKNHQVYAFVSEFSDNELD
                     IIREMGVTPVTYRSNRSGLNPFSDIKSTFLIFKELKKISPDLVFPYFAKPVIFGTFAA
                     KLAGVPRIVGMLEGLGFAFTPQPEGIPLKTKIIKGILIALYHIALPMLESLIVLNPDD
                     KDELTDKYGIKIKNIHILGGIGLDLRQYPYSEADIPDEKEPVKFLFIGRFLKEKGIDD
                     FIRAAEQVKDKYPDTVFTALGAIDK"
BASE COUNT          546 a          726 c          537 g          524 t
ORIGIN      
        1 cgcaaactta accgactcaa aatacacatt atgacgcaca ccgcatcgaa aacacccaaa
       61 ttttggctga ccatcaccgc cgccgcattc atcctgctga ttaccatcgg catgaggatg
      121 acgctcggac tgttcgtcca acccgtcgtc aacaccaccg aattgagcat tgcccaattc
      181 agcctcatca tcgccgtttt ccaactgatg tggggcatat cgcaaccatt gtccggcgcg
      241 cttgccgacc gtttcggcgc gttcagggta ttaagcggcg gcgcagtcct gctcgtctgc
      301 gcctgcctga ttgcccccaa catcccgact tattgggggc tgatgattgc cgtcgggctg
      361 ctgctcgcat tcggcacagg ctcaggcggt ttctccatca ttatggggca ggtcgccgcc
      421 caagtccccg cacacaaacg cggcttggca tccggactgg tcaacgccgg cggttcggca
      481 ggacaattcc tgttcgcacc gctggttcaa ggactcgtcg tcctgcccga agtcggctgg
      541 acgggcacat tttacgtttg gggcgcaatc gccctgctga ttctgcccgt ctcatggtgg
      601 cttgccggcg gcaacaacgc cgcccacacc caacacgccc aagccacaca cggacaaagc
      661 ctcggagaag cagtcaaaac cgccttcaaa accccaagct acatcctgct gcacctaagc
      721 ttttttgcct gcggcttcca catcgccttt ctcgtaaccc acctacccac ggaagtcgcc
      781 ctgtgcggac tgcccgccac cgtcgcctcg acatccatcg ccatcatcgg actggcaaac
      841 atcgccggct gcattttttc cggctggtgc acaagccgcg ttcggggcaa atacgtcctg
      901 ttcggactgt acgcctcgcg cgccgcgatg atactcatct acattttttc gcccaagacc
      961 gacctcaact tctacatttt cgccgccgca ctcggattta cctggctcgc caccgtcacg
     1021 ccgaccgcct ccattaccgg caaactcttc ggcacacgct acctcgccac cctgttcgga
     1081 ctgacgatgc tcagccacca aatcggcgga ttcctcggct cgtacatcgg cggcatcgtg
     1141 attacacaat tcggcgacta cggctggatg tggtacgccg acgcactgct ggcgggaacc
     1201 gccgccctcc tcaacctccc catccgcgaa ccccgaaccg ccgcatgaaa gaatgccgtc
     1261 tgaaaaccct cagacggcat tttccaaaca ccccgcccgt ttccggactg cacgacacgc
     1321 aaatcagcct tatcaaaccg caaacaaccg ccgcgattaa accgccattc aaataagtcc
     1381 gttttccctt cgggtgtaaa atcatcacaa aacgcgatac tgtatatcgc cgggcgttat
     1441 gcagcggatt tcaggataaa atgccgtctg aagccgcccc tgcccgggcg ggcgaagcgt
     1501 cggatgcggt gcgcttggca aaggtttgcc cgccgcgccc cgtatccggc atttcatcaa
     1561 tgcagaccgc atttccaatc ctataattca aggtgtccgc cttatgaaaa tcgtttttat
     1621 cacaacagtc gcatccagca tttacggttt ccgcgccccc gtcattaaaa aattaatcgg
     1681 caaaaaccat caggtgtatg cctttgtatc ggagttttcc gataatgaat tggatattat
     1741 cagggaaatg ggggttacac ccgttaccta ccgttcaaac cgcagcgggc tgaacccgtt
     1801 ttccgatata aaatccacct tcctcatctt taaagaactc aaaaaaatat cgccggattt
     1861 ggttttccct tatttcgcaa aacccgtgat tttcggcact tttgccgcaa aactggcagg
     1921 cgtgcccaga atcgtcggga tgctggaagg tttgggattc gcatttaccc cgcagccgga
     1981 aggcataccg ttaaaaacaa aaatcataaa ggggattttg attgccttgt accacattgc
     2041 cctgccgatg ttggaaagcc tgattgtatt aaaccccgac gacaaagacg aactgacgga
     2101 caaatacggc atcaaaataa aaaacatcca tattttgggc ggaatcggtc tggatttgcg
     2161 gcaatatcct tattccgagg cggatattcc cgatgaaaaa gaacccgtaa aattcctctt
     2221 tatcggcaga tttctgaaag aaaaggggat tgatgatttt attcgggcgg cggaacaggt
     2281 taaggacaaa taccccgata cggtttttac cgctttgggc gcaatcgaca aat
//
LOCUS       DAWKJW010000207         2308 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.207, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000207 DAWKJW010000000
VERSION     DAWKJW010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2308)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2308)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2308
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.207"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..567)
                     /locus_tag="WJJ54_001861"
     CDS             complement(<1..567)
                     /locus_tag="WJJ54_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEZ7342676.1"
                     /translation="MEHKLPQLPYELDALSPHLSKETLEFHYGKHHQTYITNLNNQIK
                     GTEFENLPLEEIVKKSSGGVFNNAAQTWNHTFYWLGFTPKGQGKPSGELAAAIDAKWG
                     SFEKFQEAFSACAAGTFGSGWAWLVKTPAGGLDLVSTSNAATPLTTENTPLLTCDVWE
                     HAYYIDYRNSRPNYLKGFWEIVNWDEVAK"
     gene            730..2136
                     /gene="dnaB"
                     /locus_tag="WJJ54_001862"
     CDS             730..2136
                     /gene="dnaB"
                     /locus_tag="WJJ54_001862"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEZ7342677.1"
                     /translation="MNDYAAMPSEDREVGALSLPPHSMEAEQSVLGGLMLENPAWDRI
                     ADVVSGEDFYRHEHRLIFRSIAKLINESRPADVITVQEDLQRNEELEAAGGFEYLITL
                     AQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQ
                     IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVPTGFIDLDKKTSGLQPG
                     DLIIVAGRPSMGKTAFSINIAEHVAVEGKLPVAVFSMEMGGAQLVMRMLGSVGRLDQS
                     VLKTGRLEDEHWGRLNEAVVKLSDAPVYIDETPGLTALELRARARRLARQFNNKLGLI
                     VIDYLQLMAGSGRSDNRASELGEISRSLKALAKELQVPIIALSQLSRTVESRTDKRPM
                     MSDLRESGAIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
                     FTKFDNAAYIPEEAKIED"
BASE COUNT          568 a          586 c          622 g          532 t
ORIGIN      
        1 tttggcgact tcgtcccagt tgacgatttc ccagaaacct ttcaggtagt tgggacggct
       61 gttgcggtag tcgatgtaat aggcgtgttc ccacacgtcg caggtcagca gcggcgtgtt
      121 ttcagtggtc agcggagttg ctgcgttgga agtggaaacc aaatccaatc cgccggcagg
      181 ggttttcacc agccacgccc aaccggagcc gaacgtaccg gcagcgcaag cggagaatgc
      241 ttcttggaat ttctcgaagc tgccccattt cgcgtcgatg gcggcggcca gttcaccgga
      301 aggtttgcct tgacctttgg gcgtgaaacc cagccagtag aaagtgtggt tccaagtttg
      361 ggctgcgttg ttgaacacgc cgcccgaaga ttttttcaca atctcttcca aaggcaggtt
      421 ttcaaattcg gtgcctttga tttgattgtt caggttggtg atgtaggttt gatggtgttt
      481 gccgtagtgg aattccaaag tctctttgct cagatgcggg gacaatgcgt ccagttcata
      541 aggcagttgc ggcagcttat gttccatttt gtgctcctaa tattgtttta aatgttgtat
      601 tttggcagtg ttgctgcaaa tagcttggca gcgcacatat tttacctgtt ttgaggaatg
      661 gaaaccaatt aaacctgctt tacgctataa tagaagattg caatttcggc acgacagata
      721 ggatgtacca tgaacgatta cgcagccatg ccgtctgaag accgtgaggt cggcgcattg
      781 tcgcttccgc cgcactcaat ggaggcggaa caatccgttt tgggcgggtt gatgctggaa
      841 aatccggcat gggacaggat tgccgatgtg gtttcgggag aggatttcta ccggcatgaa
      901 caccgcctga ttttccgttc cattgccaaa ttaatcaatg agagccgtcc cgcagatgtg
      961 attacggttc aggaagattt gcagcggaac gaagaattgg aagcggcagg cggattcgaa
     1021 tacctgatta cgctggcgca aaacaccccg tctgccgcca acatccgccg ctacgccgaa
     1081 atcgtgcgcg agcgttccat catgcgccaa ctcgccgaag tggggacgga aatcgcccgc
     1141 agcgcataca atccgcaagg cagggacgcg gggcagcttt tggacgaggc ggaaaacaaa
     1201 gtattccaaa tcgccgaaag cacggccaaa tccaagcagg gctttttgga gatgcccgat
     1261 ttgctgaaag aagtcgtaca gcgcatcgat atgctctact cgcgcgacaa tcccgatgaa
     1321 gttaccggcg tgccgacggg gttcatcgac ctcgacaaaa aaacctcggg tctgcaaccc
     1381 ggcgacctga ttatcgttgc cggtcgtccg tctatgggta agaccgcctt ttctatcaat
     1441 atcgccgaac acgttgccgt agaaggcaag ctgcccgttg ccgtcttttc gatggagatg
     1501 ggcggtgcgc aactggtcat gcgtatgctc ggctcggtcg gacggttgga tcaaagcgtc
     1561 ctgaaaacag gcaggctcga agacgaacac tggggtcgtc tgaatgaagc agtcgtcaaa
     1621 ctctcagacg cgcccgtgta catcgacgag accccgggtc tgactgcgct cgaactgcgc
     1681 gcccgtgccc gccgtctcgc ccgtcaattt aacaataagc ttggattgat tgtcatcgac
     1741 tacctgcaac tgatggcagg atccggccgt tccgacaacc gagcttcgga gctgggagag
     1801 atttcacgtt cgctcaaagc gttggcgaaa gaattgcaag tccccatcat cgccctgtcg
     1861 caattgagcc gcacggtcga atcgcgtacc gacaaacgcc ccatgatgtc cgaccttcgc
     1921 gagtccggcg caatcgagca ggatgccgac ctgattatgt tcatgtaccg cgacgaatac
     1981 tacaaccagg actcacccat gaaaggcctt gccgaatgta tcatcggcaa acaccgcaac
     2041 ggtcccgtcg gtaaaatctt cctcacatgg acgggacaat tcaccaaatt cgacaatgct
     2101 gcctatattc ccgaggaggc aaagatagag gattaaatgg ctatataaaa atttattagg
     2161 cgaaatcagg caaaatcgtt taaaatcatg ctgagagatt gccctaaaaa ataaaacgcg
     2221 gtcttgaggc atttttgcat tcagcccgca tataattgaa aatatagtgg attaacaaaa
     2281 atcaggacaa ggcaacgaag ccgcagac
//
LOCUS       DAWKJW010000208         2296 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.208, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000208 DAWKJW010000000
VERSION     DAWKJW010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2296)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2296)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2296
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.208"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(180..293)
                     /locus_tag="WJJ54_001863"
                     /pseudo
     CDS             complement(180..293)
                     /locus_tag="WJJ54_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705522.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            433..508
                     /locus_tag="WJJ54_001864"
     tRNA            433..508
                     /locus_tag="WJJ54_001864"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:467..469,aa:Glu,seq:ttc)
     gene            893..1058
                     /locus_tag="WJJ54_001865"
                     /pseudo
     CDS             893..1058
                     /locus_tag="WJJ54_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216748.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance methyltransferase TehB"
     gene            complement(1108..1914)
                     /gene="thiD"
                     /locus_tag="WJJ54_001866"
     CDS             complement(1108..1914)
                     /gene="thiD"
                     /locus_tag="WJJ54_001866"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEZ7342678.1"
                     /translation="MKSSFVQTLTIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVT
                     AQNTLGVSAVHLVPTETITAQIQAIREDFDIRAYKIGMLGTAEIIECVADKLKHCSFG
                     RRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDVLTPNLPEAEALTGVHIENRKDAE
                     RAAKILLDYGVKNVVIKGGHLNGSTSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCT
                     FSACITAELAKGSDVCKAVRTAKSYITAAISNPLEIGAGHGPVNHWAYRD"
BASE COUNT          545 a          581 c          591 g          579 t
ORIGIN      
        1 ttcttgagat tttgcgttct agattcccgc tttcgcggga atgacgaaaa gtggcgggaa
       61 tgacgaagtt tcagacggca tcgcccgcct gttttgatat ggcggcaccc cccccgacaa
      121 aaaaaacaat ccggaacgca tctgaccgtt ccggcttgtt ttcaggcgaa tccgccgcat
      181 cagaacatac tgcgcacgcc catattgacc tgccaagtct ggcgcatcgt gtgcatcgaa
      241 gacctttgcg cctcaaaata aagctgcctt ccgttgtcgg cattaccacg caaaaaaatg
      301 aattgcttga tattccaatg ttttttatat gtttttatat tgtgatgcga tcagacaaac
      361 gcccccctga catttgttta gacggcatcg tattgctaaa tttctataag tatgtataat
      421 gtccgtttcc acgcgcccat cgtctagagg cctaggacac tgccctttca cggcggcaac
      481 cggggttcga atccccgtgg gcgtgccaat tcaaaaacct gcttgtttca agcaggtttt
      541 tttattatga atcgtcattc ccgcaccctt cgtcattccc gcgaaagcgg gaatctggag
      601 cgcaggatta aagaaaccgt tttatccgat aagcttccgt gccgacaggt ctggattccc
      661 gcctgcgcgg gaaggacggc agagggtgga cgatgccgtc taaagcctga caaggcattt
      721 gatgccgtct gaaacttcgt cattcccgca cccttcgtca ttcccgcaaa agcgggaatc
      781 tagagcgtag ggttgaagaa accgttttat ccaataagtt tccgtgccga caggtctgga
      841 ttcccacttt cgtgggaatg acgagtcttt tataacctga gacctttgca aaatgccttt
      901 cccttttaaa tttaaagagg ggggagctga aggattatta tcgggattgg gagctggtcg
      961 aatataaaga agaattgggc gcgatgcacg ccaaagacga aaacggcaat ccgatacggt
     1021 ttaaatttgt aaccatgctg gcgaaaaagc ctgaataatc ctcaaaaatg ccgtctgaac
     1081 attttgtttc agacggcatt tttacgtcta gtcccgatac gcccaatgat tgaccgggcc
     1141 gtgtcccgcg ccgatttcca aagggtttga gattgccgcc gtaatgtagg acttggcagt
     1201 ccgtacggct ttgcaaacgt ccgagccttt tgccaactcg gcggtgatgc aggcggaaaa
     1261 cgtgcagccc gtgccgtgcg tgtgggcggt tggaaagcgc gggctgtcca attccagcgt
     1321 ttcattttgc gtaaacagcc aatccgtgca gcgtccgctt gtgctgccgt tcaaatgtcc
     1381 gcctttgata acgacatttt tgacaccgta atcaagcagg atttttgccg cacgttccgc
     1441 atctttacgg ttttcgatat gcacgccggt cagggcttcc gcttcaggca ggttgggggt
     1501 taatacatcc gtatcgggaa gcagtaggcg cgtcagtgcc gcaacggcag aatcctgcaa
     1561 cagcggcgca ccgcctttgg caatcatcac agggtcgagt acgcgcctgc caaagctgca
     1621 gtgtttcagc ttgtcggcaa cacattcgat gatttccgcc gtgccgagca ttcctatttt
     1681 gtaggcgcgg atgtcaaagt cttccctaat tgcttggatt tgtgcggtga tggtttcggt
     1741 cgggacgaga tgaaccgccg acacgcccaa ggtattttgc gcggtaacgg cggtgatgac
     1801 gcacgttccg aacacgccgc gcatctgaaa cgttttcaaa tccgcctgaa tgcccgcacc
     1861 gccgcccgaa tccgaaccgg cgatggtaag cgtttgcaca aaagagcttt tcatttgttc
     1921 ctccttaata ttgtgtccga taaaaagggc taatgcctgt aaaaaagcac ggcgatgccg
     1981 tctgaaaacc gcagcgcggg gtttgtggtg cattatatgc cgtattgcag gacaaggcac
     2041 agagcagggc ggcggggtgc atcgtagcaa ctgtattttt gcccgacggg gtgaaaaata
     2101 cagttgctac acccactgat aatgaaaaaa gagagcaatg ccgtctgaac cgcgtgttgc
     2161 ggcgagcata aaccggcacg ctttattcgt cattcccaca aaaacagaaa cctaaaattc
     2221 cgtcattcct acgaaagcgg gaatccagtg tgttcggttt cagttgtttt tgggtttcgg
     2281 gtgatttcca aatcga
//
LOCUS       DAWKJW010000209         2292 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.209, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000209 DAWKJW010000000
VERSION     DAWKJW010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2292
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.209"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(333..743)
                     /locus_tag="WJJ54_001867"
     CDS             complement(333..743)
                     /locus_tag="WJJ54_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342679.1"
                     /translation="MKIYNLDNIITSSALSLYKSTWVKLDLISCAKFIIKGTDFTFDW
                     DEGIENWIVFFHKNKVIGYLCAKLPFAILDNEQLKNQLYHKYPHVLTLQIKNIETEKI
                     SLNVNICRLTLCPSFHDEHDTLVCSVQDFYVNTV"
     gene            complement(747..1502)
                     /locus_tag="WJJ54_001868"
                     /pseudo
     CDS             complement(747..1502)
                     /locus_tag="WJJ54_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218290.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(1572..1889)
                     /locus_tag="WJJ54_001869"
     CDS             complement(1572..1889)
                     /locus_tag="WJJ54_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342680.1"
                     /translation="MKKNIFHNVSLYEIIFSDNGNTLTLSFTDTIEGNYFGYIKCSNI
                     LNFKLDTNNFVDYEDKEDSLFPLFIPEIELYKYQFYSEIIIDVGIIIKISAETINFEP
                     LGK"
     gene            complement(1886..>2292)
                     /locus_tag="WJJ54_001870"
     CDS             complement(1886..>2292)
                     /locus_tag="WJJ54_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HEZ7342681.1"
                     /translation="TVWRGKKVELNPTKWDWVKNTGYKKPATRPMQTLDGEMAGGNKP
                     VVKSIRPTTRDELRQALQEQGFRRTGSDAAQYETWKGPDGVKIDIRPNGEVIRTQRVP
                     RTDGVQGKYPQRQDYEGNPLPNNHHHSGYFVK"
BASE COUNT          653 a          443 c          385 g          811 t
ORIGIN      
        1 ttgtatccga caaaaatatt tgacgcgtct atcgtttccg aaatgccgct gttgaaaaac
       61 gtcggattcg agaatccgac ctacggttgc tgaacaatgt tttgtagaac ttgctcaaaa
      121 tccatgtttc gccattttcc tttatatata cctaatgcag cacgggttac gatttcgttt
      181 aagtcataaa tagccattta cgtcctctgc taattttcag cgagtagatt gggttaccaa
      241 acccaacaaa aaagcagcct gaaaaatttc aggatgcttg ttttatgttt tttatcagtg
      301 aattaggttt taatccagcc tgcgcttgct agttaaacag tatttacata aaaatcttgc
      361 actgaacaaa caagcgtatc atgttcatca tgaaatgatg ggcataacgt taatctacaa
      421 atgtttacat ttaaagatat tttttcagtt tcaatatttt taatttgtaa ggttaataca
      481 tgaggatatt tgtgatatag ctgatttttt aattgttcgt tgtctaatat agcaaaaggt
      541 aattttgcac acaaataacc aataactttg tttttatgaa aaaaaactat ccaattttca
      601 attccttcat cccaatcaaa agtaaaatcc gttcctttta tgataaattt agcacaagat
      661 attaaatcta acttaaccca agtggattta tacagactca atgctgatga agttataata
      721 ttatctaaat tataaatttt cataaatcaa cgttccttac ctggtgttcc atgcacaggt
      781 ctaaacccat ctttattcgg ctttctacga taaatgttaa ttatatgtgt cggttttccg
      841 tctgtatagc caactatgtc gttcgttgga acttttgcct tattttgact atcccataaa
      901 ttatgtttat ctgcatatct agcagcatct aatgtagctt tttccgcatc aacatctgat
      961 ttaaataaat ttttgctatc tatcttgtct agactagatg catcaggttt gtgtcgtacc
     1021 atactgagag ggtcagtaat atatttacca tctgtaatag ctgatccacc attataggta
     1081 gtatgcgtat aatttttttg tggaacgaga ctattttgca aagattgttg tgtagaaacg
     1141 ccagctttgc cattaggagt agcttgcttc gctggcttat tcccaccggc catttcccca
     1201 tctaaagtct gcataggtcg ggcagcaggt gttttataat cggtattttt aacccaatcc
     1261 catttagtcg ggttaagttc tactttttta ccgcgccaaa ccgtacctgc ggcctctgct
     1321 acggcaaggg cagtttgggc tgttgcagtt atattcggat gggcatcagc ccattgtctg
     1381 gcggaattga taccgtcttt taccgcaaaa gcactatcct gtaataggct cgcggcagca
     1441 agttgtgttt ccggacttaa atttcctaaa ttattaatac cttgtagagt ctgctgcgca
     1501 gagatgtagc aactgtattt ttaccccgtc gggtaaaaat acagttgcta cggctgctga
     1561 gaaagcagtt actattttcc cagtggctca aaattaattg tttcagcaga tatttttata
     1621 ataatcccta catcaataat aatttcacta taaaattggt atttatatag ctctatttcg
     1681 ggtataaaca agggaaacaa gctatcttcc ttatcctcat aatctacgaa attatttgta
     1741 tctaatttaa aattcaaaat attactgcat ttgatatatc cgaaataatt accttcaatt
     1801 gtatctgtaa aagataatgt aagggtattt ccattatcgg aaaagattat ttcataaagg
     1861 cttacattgt gaaaaatatt ttttttcatt tgacaaaata tccagaatga tgatgattat
     1921 ttggcaatgg attgccttca taatcttgtc gttgcggata ttttccctgt acaccatcgg
     1981 ttcgcggcac tctttgggtt cttataacct ctccatttgg acgaatatct attttcacgc
     2041 catcaggacc tttccatgtt tcatattgag ccgcatctga accagtacgt ctaaaacctt
     2101 gttcttgcaa tgcttgacgt aattcatctc gcgtagttgg tctgatagat ttaacaactg
     2161 gcttgtttcc acctgccatc tctccatcta aagtctgcat aggtcgggta gcaggttttt
     2221 tataaccggt atttttaacc caatcccatt tggtcgggtt aagttctact tttttacctc
     2281 tccaaaccgt ac
//
LOCUS       DAWKJW010000210         2282 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.210, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000210 DAWKJW010000000
VERSION     DAWKJW010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2282)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2282)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.210"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            180..1991
                     /gene="typA"
                     /locus_tag="WJJ54_001871"
     CDS             180..1991
                     /gene="typA"
                     /locus_tag="WJJ54_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEZ7342682.1"
                     /translation="MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDS
                     NDLEKERGITILAKNTAIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQE
                     GPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFP
                     IVYASGLSGFAKLEETDESNDMRPLFDTILKYTPAPSGSADETLQLQISQLDYDNYTG
                     RLGIGRILNGRIKPGQVVAVMNHDQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIIS
                     GIEDIGIGVTITDKDNPKGLPMLSVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRL
                     QKELLTNVALRVEDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDID
                     GQKCEPYENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGF
                     QGEFMTLTRGVGLMSHVFDDYAPVKPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRM
                     FVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKLTNIRASGTDEAVRLTTPIKLTLEGA
                     VEFIDDDELVEITPQSIRLRKRYLSELERRRHFKKLD"
BASE COUNT          572 a          650 c          588 g          472 t
ORIGIN      
        1 aatcggttcc gtactatccg tactgtctgc ggcttcgccg ccttgtcctg atttttgtta
       61 atccactata ccgtctgaaa ggcaagggct tcagacggca tcttcatttc ccaaatactg
      121 tccggtaaag cgtggtataa tgcgcagtta tctcttacag tttttgaaaa acattaatta
      181 tgaaacaaat ccgcaacatc gccatcatcg cccacgtcga ccacggcaaa accacattgg
      241 tcgaccaact gctgcgccaa tccggcacat tccgcgccaa ccagcaggtt gacgagcgcg
      301 tgatggacag caacgacctc gaaaaagaac gcggcatcac catcctcgcc aaaaacaccg
      361 ccatcgatta cgaaggctac cacatcaata tcgtcgacac gccgggacac gccgacttcg
      421 gcggcgaagt ggagcgcgtt ttggggatgg tggactgcgt cgtcttgttg gtggacgcgc
      481 aggaaggccc gatgccgcaa actcgtttcg tgaccaaaaa agccttggct ttggggctga
      541 aaccgattgt cgtcatcaat aaaatcgaca aaccgtccgc ccgtccgagc tgggtcatcg
      601 accaaacttt cgagctgttc gacaacttgg gcgcgaccga cgagcagttg gatttcccga
      661 ttgtttatgc ttccggtctg tccggtttcg ccaaattgga agaaaccgac gagagcaacg
      721 acatgcgtcc gctgttcgat actatcttaa aatatacgcc tgcaccgagc ggcagcgcgg
      781 acgaaacgct gcaactgcaa atttcccaac tcgactacga caactacacc ggccgcctcg
      841 gtatcggtcg tatcttgaac ggacgtatca agcccggtca agttgttgcc gtcatgaacc
      901 acgatcaaca aatcgcccaa ggccgcatca accagctttt gggtttcaaa ggtttagaac
      961 gcgtgccgct tgaagaagcc gaagccggcg acatcgtgat tatttccggt attgaagaca
     1021 tcggcatcgg cgtaaccatc accgacaaag acaaccccaa aggcctgccg atgttgagcg
     1081 tggacgaacc gacgctgacc atggacttta tggttaacac cagcccgttg gcgggtacgg
     1141 aaggcaaatt cgtaaccagc cgccaaatcc gcgaccgcct gcaaaaagaa ttgctgacca
     1201 acgtcgccct gcgcgtggaa gacaccgccg atgccgacgt gttccgcgta tccggacgcg
     1261 gcgagctgca cctgaccatt ttgttggaaa atatgcgccg cgaaggctac gaactcgccg
     1321 tcggcaaacc gcgcgtcgtg taccgcgaca tcgacggtca aaaatgcgaa ccttatgaaa
     1381 acctgactgt ggacgtaccc gacgacaacc aaggcgcggt aatggaagaa ctcggccgcc
     1441 gccgtggcga actgactaat atggaaagcg atggcaacgg acgcacccgc ctcgaatacc
     1501 atattccagc gcgcggcttg atcggtttcc aaggcgaatt catgaccctg acgcgcggtg
     1561 tcgggctgat gagccacgtg ttcgacgatt acgcgcccgt caaacccgat atgcccggcc
     1621 gccacaacgg cgtgctggtg tcccaagagc agggcgaggc ggtcgcttac gccttgtgga
     1681 atcttgaaga ccgcggccgt atgttcgtat cgcccaacga caaaatctac gaaggtatga
     1741 ttatcggcat ccacagtcgc gacaacgatt tggtggtcaa tccgctcaaa ggcaaaaaac
     1801 tcaccaacat ccgcgccagc ggtaccgacg aagcggtgcg cctgactacg ccgatcaaac
     1861 tgactctgga aggcgcggtc gagtttatcg acgatgacga gctcgttgaa atcacgccgc
     1921 aatccatccg tctgcgcaag cgttacttga gcgaattgga acgccgccgc cactttaaaa
     1981 agctggatta atgtttaaat gatacgcgat gccgtctgaa aaatttcaga cggcattttt
     2041 tattcggacg ggctttgcgg cttcttgaag ctgtttcaga cggcgttttt cctacccaat
     2101 caagaaactg ccgccatttt tccagcggca tatcgccccg tcgcgtttcg gtatcgggtt
     2161 cggcttcccg gcagcatgtc gaacaatgcc ttttgaagga atacgccttt tgagtcctta
     2221 caagcttagg aagaggatat agtggattaa caaaaatcag gacaaggcga cgaagccgca
     2281 ga
//
LOCUS       DAWKJW010000211         2216 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.211, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000211 DAWKJW010000000
VERSION     DAWKJW010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.211"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            7..822
                     /locus_tag="WJJ54_001872"
     CDS             7..822
                     /locus_tag="WJJ54_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009119615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEZ7342683.1"
                     /translation="MVCLSAAISILGGCAVVADVYGHDSATMNAAAAKDYMKTVELNK
                     SAGNVDTTSRTARRVQAVFRRMLPYADAANNTGHKFYWKMTVFKNDELNAWAMPGGKM
                     AFYTGIVDKLKLTDDEIAAIMGHEMTHALHEHGKNKVGQQILTNTAAQIGTQIILDKK
                     PDTNPELVGLGMDILGTYGITLPYSRSLEEEADEGGMMLMAQAGYHPAAAVRVWEKMN
                     QENDQNGFISAITSTHPTNNARIENLKRLLPTVMPVYEQSVRNRGRVNKKRRR"
     gene            complement(1205..1516)
                     /locus_tag="WJJ54_001873"
     CDS             complement(1205..1516)
                     /locus_tag="WJJ54_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HEZ7342684.1"
                     /translation="MKYKSEALAAIHEMMEGAYNIGAIDKKTMRDFDKSCLTEIKPLS
                     GGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNKGIEAI
                     A"
     gene            complement(1513..1881)
                     /locus_tag="WJJ54_001874"
     CDS             complement(1513..1881)
                     /locus_tag="WJJ54_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEZ7342685.1"
                     /translation="MRIFKNQWIVKFAKKHKINDSELLEAVERADNGLIDADLGGGVI
                     KQRIARQGQGRSGGYRSLILFKQADRAFFVYAFAKNDRENISDKELDVYRKAAAYYLK
                     YTRAELAALKEDGIITEIES"
BASE COUNT          502 a          559 c          547 g          608 t
ORIGIN      
        1 aaacggatag tctgtctgtc ggcagcaatc tcgatattgg gaggttgtgc ggtcgttgct
       61 gatgtttacg gtcatgattc cgccacaatg aacgctgcgg ctgccaaaga ttatatgaaa
      121 acggttgagt tgaacaagtc tgccggcaat gtcgatacca catccagaac agcccgcagg
      181 gtgcaggcag tatttcgacg tatgctgcct tatgccgatg cggcaaataa taccggccat
      241 aagttttact ggaaaatgac ggttttcaaa aacgatgagc tgaacgcgtg ggcaatgccc
      301 ggtggaaaaa tggcgtttta tacggggata gtcgacaaac tcaagctgac cgatgacgaa
      361 attgccgcca ttatggggca tgaaatgacg cacgccctgc atgaacacgg taaaaataag
      421 gtcgggcaac aaattttgac caatacggcg gcgcagatag gcacgcagat tatattagac
      481 aaaaaaccgg acactaatcc ggaattggtc ggattaggta tggatatttt gggaacgtac
      541 ggcattacct tgccttatag ccgcagcttg gaagaagaag ccgatgaggg gggaatgatg
      601 ttgatggcgc aggcaggcta tcatccggcg gccgctgtca gggtttggga aaaaatgaat
      661 caggaaaacg accaaaacgg ctttatttct gctattacct ctactcatcc gacaaacaat
      721 gcccgtatag aaaatctaaa acggttgttg ccgaccgtta tgccggttta tgagcaaagt
      781 gtcagaaata gggggcgcgt taataaaaaa cgtcggcgtt aagggaaggg gatcgagaat
      841 ttgagccgtt gtttcaaaat gccgtctgaa tccgtttgag attcagacgg catttaaaca
      901 gttctgagcc ccgcccgttt tgccttcaag cccgcgccgc ttaaatccaa tcccccctgc
      961 aacgggcgca aaaaaatccc cgtgccttgc gaccggggat gtttcgggtt tcgcgcccgt
     1021 ctgcgccgtg ccttgctgtc gggctatgcc gtctgcaccg ccgccgtttc ggcttggttt
     1081 gatgcggtcg ggcatttgtg cggctatgcc ctgatattcg gttcggcggt cttgcctgtc
     1141 ttggcaggca tattcagcag cgtgtctatt gtgaacttgc tgattttgcc gtttgccaag
     1201 tcgtctacgc aatggcttcg atgcccttgt ttttgacgat ggtcagcagc ttcaacgccg
     1261 cgccgctcgg ctttttaacg ccccgctccc aagccgaaac gtgatttttt cccacgttga
     1321 gatagatggc gaaagcggct tgcgatagtg cctccttctc cctgattgcc ttgatgtctc
     1381 cgccgctcaa cggtttgatt tcggtcaggc aggacttgtc aaagtcgcgc atggtctttt
     1441 tgtcgattgc gccgatgttg taagcccctt ccatcatttc atgaatggcg gctaatgcct
     1501 cgcttttgta tttcatgatt ctatctccgt gataatgccg tcttctttca aagccgccag
     1561 ctctgcccgc gtgtatttca gataatatgc ggcggctttt cggtaaacgt ccagttcttt
     1621 atccgaaatg ttttccctgt cgttcttggc aaaggcgtaa acaaaaaatg ccctgtctgc
     1681 ctgtttgaac agtatcaggc tgcgatagcc gccgcttctg ccttgtcctt gccttgctat
     1741 gcgctgctta atcacaccgc cgcctaaatc tgcgtctatc agcccgttat ccgcccgctc
     1801 taccgcttcc agcagctcgg aatcgttgat tttgtgcttc ttggcaaatt tcactatcca
     1861 ttggtttttg aatatccgca ttgtgtagcc gttgattagt gatacttgga attataccag
     1921 agacagacaa cacggcaagc cgccttttta taccccgcaa tttctccgtt tatgccgcct
     1981 gaaacactgg cggctaacct gattattttt taatcaatcg cttttaatgg ctcaaattgc
     2041 gtttttagcg cgtttcgctg tcttcctatg ccccctatat ataaccaagc ggtttaaccg
     2101 ccattcctgc tcaaaatagg cgcggttccg tgcgttttgg cttttcattc cgctacgctc
     2161 ccactgctaa gacggtgaaa aaccggaaaa ccccaaaagt tgttaccgat tcgtta
//
LOCUS       DAWKJW010000212         2208 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.212, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000212 DAWKJW010000000
VERSION     DAWKJW010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.212"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            234..2009
                     /gene="nhhA"
                     /locus_tag="WJJ54_001875"
     CDS             234..2009
                     /gene="nhhA"
                     /locus_tag="WJJ54_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin NhhA"
                     /protein_id="HEZ7342686.1"
                     /translation="MNKIYRIIWNSALNAWVVVSELTRNHTKRASATVETAVLATLLF
                     ATVQASANNEEQEEDLYLDPVQRTVAVLIVNSDKEGTGEKEKVEENSDWAVYFNEKGV
                     LTAREITLKAGDNLKIKQNGTNFTYSLKKDLTDLTSVGTEKLSFSANGNKVNITSDTK
                     GLNFAKETAGTNGDTTVHLNGIGSTLTDTLLNTGATTNVTNDNVTDDEKKRAASVKDV
                     LNAGWNIKGVKPGTTASDNVDFVRTYDTVEFLSADTKTTTVNVESKDNGKKTEVKIGA
                     KTSVIKEKDGKLVTGKDKGENGSSTDEGEGLVTAKEVIDAVNKAGWRMKTTTANGQTG
                     QADKFETVTSGTNVTFASGKGTTATVSKDDQGNITVMYDVNVGDALNVNQLQNSGWNL
                     DSKAVAGSSGKVISGNVSPSKGKMDETVNINAGNNIEITRNGKNIDIATSMTPQFSSV
                     SLGAGADAPTLSVDGDALNVGSKKDNKPVRITNVAPGVKEGDVTNVAQLKGVAQNLNN
                     RIDNVDGNARAGIAQAIATAGLVQAYLPGKSMMAIGGGTYRGEAGYAIGYSSISDGGN
                     WIIKGTASGNSRGHFGASASVGYQW"
BASE COUNT          686 a          544 c          540 g          438 t
ORIGIN      
        1 ccgccgtcat tcccgcaaaa gcgggaatcc agacccgtcg gcacggaaac ttaccgaata
       61 aaacagtttc cttagattcc acgtcccaga ttcccgcctt cgcgggaatg acgagatttt
      121 aagttggggg aatttatcag aaaaccccca acccccaaaa accgggcgga tgccgcacca
      181 tccgccccca aaccccgatt taaccattca aacaaaccaa aagaaaaaac aaaatgaaca
      241 aaatataccg catcatttgg aatagtgccc tcaatgcctg ggtcgtcgta tccgagctca
      301 cacgcaacca caccaaacgc gcctccgcaa ccgtggagac cgccgtattg gcgacactgt
      361 tgtttgcaac ggttcaggca agtgctaaca atgaagagca agaagaagat ttatatttag
      421 accccgtaca acgcactgtt gccgtgttga tagtcaattc cgataaagaa ggcacgggag
      481 aaaaagaaaa agtagaagaa aattcagatt gggcagtata tttcaacgag aaaggagtac
      541 taacagccag agaaatcacc ctcaaagccg gcgacaacct gaaaatcaaa caaaacggca
      601 caaacttcac ctactcgctg aaaaaagacc tcacagatct gaccagtgtt ggaactgaaa
      661 aattatcgtt tagcgcaaac ggcaataaag tcaacatcac aagcgacacc aaaggcttga
      721 attttgcgaa agaaacggct gggacgaacg gcgacaccac ggttcatctg aacggtattg
      781 gttcgacttt gaccgatacg ctgctgaata ccggagcgac cacaaacgta accaacgaca
      841 acgttaccga tgacgagaaa aaacgtgcgg caagcgttaa agacgtatta aacgctggct
      901 ggaacattaa aggcgttaaa cccggtacaa cagcttccga taacgttgat ttcgtccgca
      961 cttacgacac agtcgagttc ttgagcgcag atacgaaaac aacgactgtt aatgtggaaa
     1021 gcaaagacaa cggcaagaaa accgaagtta aaatcggtgc gaagacttct gttattaaag
     1081 aaaaagacgg taagttggtt actggtaaag acaaaggcga gaatggttct tctacagacg
     1141 aaggcgaagg cttagtgact gcaaaagaag tgattgatgc agtaaacaag gctggttgga
     1201 gaatgaaaac aacaaccgct aatggtcaaa caggtcaagc tgacaagttt gaaaccgtta
     1261 catcaggcac aaatgtaacc tttgctagtg gtaaaggtac aactgcgact gtaagtaaag
     1321 atgatcaagg caacatcact gttatgtatg atgtaaatgt cggcgatgcc ctaaacgtca
     1381 atcagctgca aaacagcggt tggaatttgg attccaaagc ggttgcaggt tcttcgggca
     1441 aagtcatcag cggcaatgtt tcgccgagca agggaaagat ggatgaaacc gtcaacatta
     1501 atgccggcaa caacatcgag attacccgca acggtaaaaa tatcgacatc gccacttcga
     1561 tgaccccgca gttttccagc gtttcgctcg gcgcgggggc ggatgcgccc actttgagcg
     1621 tggatgggga cgcattgaat gtcggcagca agaaggacaa caaacccgtc cgcattacca
     1681 atgtcgcccc gggcgttaaa gagggggatg ttacaaacgt cgcacaactt aaaggcgtgg
     1741 cgcaaaactt gaacaaccgc atcgacaatg tggacggcaa cgcgcgtgcg ggcatcgccc
     1801 aagcgattgc aaccgcaggt ctggttcagg cgtatttgcc cggcaagagt atgatggcga
     1861 tcggcggcgg cacttatcgc ggcgaagccg gttacgccat cggctactcc agtatttccg
     1921 acggcggaaa ttggattatc aaaggcacgg cttccggcaa ttcgcgcggc catttcggtg
     1981 cttccgcatc tgtcggttat cagtggtaag ggctttttcg cctgtctgct gttgggacag
     2041 gcggaaggtt tgaagggaag ggtggcgatt tgccgcctga gacctttgca aaatcccccc
     2101 aaaatcccct aaattcccac caagacattt aggggatttc tcatgagcac cttctttcaa
     2161 caaaccgcac aagccatgat tgccaaacac atcgaccgct tcccgcta
//
LOCUS       DAWKJW010000213         2205 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.213, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000213 DAWKJW010000000
VERSION     DAWKJW010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.213"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            373..885
                     /locus_tag="WJJ54_001876"
     CDS             373..885
                     /locus_tag="WJJ54_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEZ7342687.1"
                     /translation="MKNFNGKLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAVAA
                     GVPIPTIFEMEGEQGFRSRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVV
                     YLHAPPETLLERTRCDNSRPLLQVADPLAKLRELYAARDPVYRQTADFTVESANCRQT
                     VQTLLKRLSR"
     gene            965..2044
                     /gene="aroB"
                     /locus_tag="WJJ54_001877"
     CDS             965..2044
                     /gene="aroB"
                     /locus_tag="WJJ54_001877"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEZ7342688.1"
                     /translation="MKTLTVHTPSHSYPIFIGNGLLPQAGSLLKPHLGKRAAIIANET
                     VAPLYLGTLQTALDAAGVSHFSIILPDGEAHKNWQTLNLIFDGLMQNRAERKTTLIAL
                     GGGVIGDMVGFAAATYQRGAPFVQIPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQP
                     QAVLADLDTLHTLPVRELSAGMAEVIKYGALGDIGFFEWLEQNISGLMTLDREKLAQA
                     VYRCCQMKADIVAQDETEQGIRAWLNLGHTFGHAIETEMGYGTWLHGEAIAAGCVLAA
                     RLSEQLGKTSAADTARLAALLEAAGLPSAPPVFAFEKWLEHMSHDKKVSGGIMRFIGL
                     NRLGEANITEITDTDILRRTLQPYL"
BASE COUNT          536 a          685 c          533 g          451 t
ORIGIN      
        1 ttcagcacct tagagaatcg ttctctttga gctaaggcga ggcaacgctg tactggtttt
       61 tgttaatcca ctatagtatt gataaacata ttatcttcaa tatattcaat tggataattg
      121 tttacctaag caaagataat tgccttttcc tgacaaataa gtgaaatcaa cggattgtca
      181 aaacacagcc tgaaataaaa aacctccctg atttctttta tttttcctta aaatcagaaa
      241 ggttcgggat ggtcgggtta tttttccaaa cgtaccgctg ccctgccgat ttcgtataaa
      301 attccgccgt aacccgacaa gcccgaaccc tgtcgccccg aaaggcgggg tgtcaaacat
      361 taaggaattg tgatgaaaaa ctttaacggc aaactcatcc tcatcggact gatgggcgcg
      421 ggcaaaacca cgctgggccg gcaaatggcg cagcggctgg attaccgttt ttacgacagc
      481 gatcacgaaa tcgccgtagc cgccggcgtt cccatcccca ccatatttga aatggaaggc
      541 gaacagggat tccgttcgcg cgaaaccgcc atactcaaaa agctggttat cctgccccat
      601 atcgtcctgt ccaccggcgg cggcgcggtg ttaaaagaag aaaaccgcgc ccttatccgc
      661 aaaagcggca cggtcgtcta tctgcacgcc ccgcccgaaa ccctgctcga acgcacgcgc
      721 tgcgacaaca gccgtccttt gctgcaagtt gccgatcctt tggcgaaatt acgtgaactc
      781 tacgccgcac gcgaccccgt ttaccgccaa accgccgact ttaccgtaga atcggcaaac
      841 tgccggcaaa ccgtgcaaac cctgctcaaa cgcttatccc gataaaccgg catatgcgcc
      901 gcgcccagaa aaccaagccg cgccccgccc ggcgggccgg cggttcaaac tttaaggaac
      961 aacaatgaaa acactgaccg tacacacccc gtcccacagc taccccatct ttatcggcaa
     1021 cggactgctg ccgcaggcag gaagcctgct caaaccgcat ttgggcaaac gcgccgccat
     1081 catcgccaac gaaaccgtcg ccccgctcta cctcggcacg cttcagacgg cattggatgc
     1141 ggcaggcgta tcccatttca gcatcatcct gcccgacggc gaggcgcaca aaaactggca
     1201 gacgctcaac ctcatctttg acgggctgat gcaaaaccgc gccgaacgca aaaccacatt
     1261 aatcgcactg ggcggcggcg tgatcggcga catggtcggc tttgccgctg ccacctacca
     1321 gcgcggcgca ccgttcgttc aaataccgac cacactgttg agtcaagtcg actcatcggt
     1381 gggcggcaaa accgccatca accacccgct cggcaaaaat atgatcggcg cattctacca
     1441 gccgcaggcg gtgcttgccg acttggacac gctgcacacc ctgcccgtcc gcgaattgtc
     1501 cgccggtatg gcggaagtca tcaaatacgg cgcgctcggc gacatcggtt ttttcgaatg
     1561 gctcgaacaa aacatatccg gactgatgac gctcgatcgg gaaaaactcg cccaagccgt
     1621 gtaccgctgc tgccaaatga aggcagacat cgtcgcccaa gacgaaaccg aacagggcat
     1681 acgcgcatgg ctcaacctcg gacacacctt cggacacgcc attgaaaccg agatgggtta
     1741 cggcacttgg ctgcatggag aagccatcgc cgccggctgc gtgttggcgg cgcgtttgtc
     1801 cgaacaactg ggcaaaacct ccgccgcaga taccgcgcgg ctcgccgccc tgctcgaagc
     1861 cgctggactg ccgtccgcac cgcccgtgtt tgcctttgaa aaatggctcg aacatatgag
     1921 ccacgataaa aaagtcagcg gcggcatcat gcgctttatc ggtctgaacc ggctgggcga
     1981 agccaacatc accgaaatta ccgacacgga catcctccgc cgcaccctgc aaccgtatct
     2041 ctgatttcct ctgccgatgt gctgccgcgc gggtttgacg cacgatgatg attttccatc
     2101 atctttctcc gtaaaagcgg gaatccggtc cgttcggttt cggtcgtttc cgataaattc
     2161 ctgctgcttt tcatttctag attcccactt tcgtgggaat gacgg
//
LOCUS       DAWKJW010000214         2163 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.214, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000214 DAWKJW010000000
VERSION     DAWKJW010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.214"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            136..2016
                     /locus_tag="WJJ54_001878"
     CDS             136..2016
                     /locus_tag="WJJ54_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacB/RNase II family 3'-5' exoribonuclease"
                     /protein_id="HEZ7342689.1"
                     /translation="MNIFYEESGQFKIAAIIQKNDATYQVDTPHGKRTKVKANNVFAE
                     FDGDMAAFLENAQAQAADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIA
                     LYAAPMYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIA
                     ADLKTILHAPDKQSLTYKAFTKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFP
                     KGTGFPDLALPEMPDLPKADVTAFSIDDESTTEVDDALSLTDLDNGTKRVGIHIAAPS
                     LAVKPGDKMEKNIMERLSTVYFPGGKITMLPENWIAAFSLDAGAHRPAVSIYFDVDGE
                     FNVGAPTCKIEAVNISENLRIQAIEPHFNAEAGLDEAGEMMFAHHQDLIWFYQFAITL
                     QKARGKYEPNRAPQYDYSIELDKEDNVSVVRRERGSPIDTLVSEMMILANSTWAQMLH
                     DNDLPGLFRVQPTGKVRMSTKSEPHIGMGVQHYGWFTSPLRRAADYINQKQLISLIDD
                     TAEPLYQNSDAELFAALRDFDAAYTAYADFQRQMEAYWSLVYLQQQGTSELTATILKE
                     DLVRIEGLPLVTRATGIPFDALPKSQALFKITGLDPEKQFVSLNYIKAVAPAGTTAGN
                     AV"
BASE COUNT          606 a          641 c          511 g          405 t
ORIGIN      
        1 gtactggttt ttgttaatcc actataacgc aagcaccgca aagacgcgcc aaccctctcc
       61 caaccttttt tcagacggca ttttcggtaa tctgctaaaa tcgcccgctt gagtttccac
      121 agaaaaatcc gaaaaatgaa tattttttac gaagagtccg gccaattcaa aatcgccgcc
      181 atcatccaaa aaaacgatgc cacctaccaa gtcgataccc cacacggcaa acgcaccaaa
      241 gtgaaggcga acaacgtctt tgccgagttt gacggcgata tggcggcgtt tttggaaaac
      301 gcgcaggcac aggcggcgga catcgacacc gatttattgt gggaagtatg cggcgaagag
      361 gaatttaccg ccgaagccat cgccgaagaa tattacggcc atgcgccgac caaaaccgag
      421 ctggcggcaa ctttgattgc gctttacgcc gcgccgatgt atttctacaa aaaagccaaa
      481 ggcgtgttca aagccgcgcc cgaagaaacc ttaaaacaag cacttgccgc catcgaacgc
      541 aaaaaacagc aagacgcgca aatcgacgct tgggcggaag ccttgaaacg cggcgagatg
      601 ccgtctgaaa tcgcggcgga tttgaaaacc atcctgcacg ctcccgacaa gcagtcgctg
      661 acctacaaag cctttaccaa agccgccgac gcgctgaaaa cctctgccta cgaattggcg
      721 aaaaaaacgg gcggcattac gtccattccc caatacctgc aagacgggtt tgaaatcaaa
      781 tacttcccta aaggaacagg cttccccgac cttgcccttc ccgaaatgcc cgacctgccc
      841 aaggccgacg ttaccgcctt ttccattgac gacgaatcga ccaccgaagt ggacgacgct
      901 ttaagcctga ccgacttgga caacggcacg aagcgtgtcg gcatccacat cgccgcgccg
      961 tcacttgccg ttaaaccggg cgacaaaatg gaaaaaaaca tcatggaacg cttgagcacg
     1021 gtttatttcc ccggcggcaa aatcacgatg ctgcccgaaa actggattgc cgcgttcagc
     1081 cttgatgcag gcgcacaccg ccctgccgtc agcatttatt tcgatgtgga cggcgagttc
     1141 aacgtcggcg cgccgacctg caaaatcgaa gcggtcaaca tctccgaaaa cctgcgtatc
     1201 caagccatcg aaccgcattt caacgccgaa gcgggcttgg acgaagcggg cgaaatgatg
     1261 ttcgcccacc atcaagacct gatttggttt tatcaattcg ccatcaccct gcaaaaagcg
     1321 cgcggcaaat acgagcccaa ccgtgcgccg caatacgatt acagcatcga attggataaa
     1381 gaagacaacg tatccgtcgt ccgccgcgaa cgcggctcac ccatcgatac gctggtcagc
     1441 gagatgatga ttcttgccaa cagcacttgg gcacaaatgc tccatgacaa cgacctgccc
     1501 ggcctcttcc gcgtccaacc caccggaaaa gtacgcatga gcaccaaatc cgagccgcat
     1561 atcggcatgg gcgtgcagca ttacggctgg tttacctcgc cgctgcgccg cgccgccgac
     1621 tacatcaacc aaaagcagct gatcagcctg atagacgaca ctgccgagcc gctgtatcaa
     1681 aacagcgatg ccgagctttt cgccgcactg cgcgactttg atgccgccta taccgcctac
     1741 gccgatttcc aacggcagat ggaagcctac tggagccttg tgtacctgca acagcaaggt
     1801 acaagcgagc tgaccgcgac catcctcaaa gaagacctcg tccgcatcga aggcctgccg
     1861 ctggtcacgc gcgcaaccgg tattccgttt gacgcgctgc ccaaatcgca ggcattgttt
     1921 aaaattaccg gactcgaccc ggaaaagcag tttgtctcgc tcaactacat caaggcagtc
     1981 gcacccgcgg gtacaacggc aggcaatgcc gtctgaagcc cgatacggca aactccggca
     2041 acaaaaaacg gacggcaaaa aggcaagata aaatgttata taaatgtaaa atcaaaaagt
     2101 tagataacac cattgaagag gcagtattga ttgaaataaa tggttatgaa ctacattgtt
     2161 tta
//
LOCUS       DAWKJW010000215         2160 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.215, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000215 DAWKJW010000000
VERSION     DAWKJW010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2160)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2160)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2160
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.215"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            390..1808
                     /locus_tag="WJJ54_001879"
     CDS             390..1808
                     /locus_tag="WJJ54_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HEZ7342690.1"
                     /translation="MNIHPLLSKQWTLPPFLPKRLLLSLLILLAPNAVFWVLALLTAT
                     ARPIVNLDYLPAALLIALPWRFVKIAGVLAFWLAVLFDGLMMVIQLFPFMDLIGAINL
                     VPFILTAPAPYQIMTGLLLLYMLAMPFVLQKAAAKTDFRHIAVCAAVVAAAGYFTGHL
                     SYYDRGRMANIFGANNFYYAKSQAMLYTVSQNADFITAGLVDPVFLPLGNQQRAATHL
                     NEPKSQKILFIVAESWGLPANPELQNATFAKLLAQKDRFSVWESGSFPFIGATVEGEM
                     RELCAYGGLRGFALRRAPDEKFARCLPNRLKQEGYATFAMHGAGSSLYDRFSWYPRAG
                     FQEIKTAENLIGKKTCAIFGGVCDSELFGEVSAFFKKHSKGLFYWMTLTSHADYPESD
                     IFNHRLKCTEYGLPAETDLCRNFSLHTQFFDQLADLIQRPEMKGTEVIIVGDHPPPVG
                     NLNETFRYLKQGHVAWLHFKIK"
BASE COUNT          472 a          687 c          499 g          502 t
ORIGIN      
        1 aaattataac cccccttact gccgacgcac gcactttccg cgcggcgcat tccccttttc
       61 ccgcccctca aacccgcctt ttcttcaggc agggtttcag cccacctcct ttccctgttt
      121 tcctttcccc gacacgcatg cgcgccccct gccgcaccgt gccgcatttt cgcgcccgga
      181 cggcatcgtt ccgccatccg gttctctgtt ttaaataccc ctgtttcaga aagaaatgca
      241 gatgtttcaa cacacaggac gacacataaa gcaccgccct atgtgttgcc ctgatttgga
      301 aggggttacg cctcccaaat aaagtctgat cctgccgccc cgaaggacag atgtccgagt
      361 ggcgaagttt caaccgaaaa ggaaatacga tgaatattca ccccctgctc tccaaacaat
      421 ggacgctgcc gccattcctg ccgaaacggc tgctgctgtc cctgctgata ctgcttgccc
      481 ccaatgcggt gttttgggtt ttggcactgc tgaccgccac cgcccgcccg attgtcaatt
      541 tggactatct tcccgccgcg ctgctgatcg ccctgccttg gcgtttcgtc aaaattgccg
      601 gcgtattggc gttttggctg gcggttttgt ttgacgggct gatgatggtg atccaactct
      661 tcccttttat ggatctcatc ggcgccatca acctcgtccc cttcatcctg accgcccccg
      721 ccccttatca gataatgacc gggctgttgc tgctgtatat gctggcgatg ccgtttgtgt
      781 tgcagaaagc cgccgccaaa accgacttcc ggcacattgc cgtctgcgcc gccgttgtgg
      841 cggcagccgg ctatttcacc ggccatttga gttactacga ccggggtcgg atggccaata
      901 tcttcggcgc aaacaacttc tactacgcca aaagtcaggc gatgctctac accgtcagcc
      961 agaatgccga ctttattacc gccggcctgg tcgatcccgt cttcctcccc ttgggcaatc
     1021 aacagcgtgc cgccacgcat ctgaacgagc cgaaatctca aaaaatcctc tttatcgtcg
     1081 ccgaatcttg ggggctgccg gccaatcccg aacttcaaaa cgccactttt gccaaactgc
     1141 tggcgcaaaa agaccgtttt tcggtttggg aaagcggcag ttttcccttt atcggcgcga
     1201 cggtcgaagg cgaaatgcgc gaactgtgcg cctacggcgg tttgcgcggg ttcgcactgc
     1261 gccgcgcgcc cgacgaaaaa tttgcccgct gcctccccaa ccgtttgaaa caagaaggtt
     1321 acgccacctt tgcgatgcac ggcgcgggca gttcgcttta tgaccgcttc agctggtatc
     1381 cgagggcggg ctttcaagaa atcaaaaccg ccgaaaacct gatcggtaaa aaaacctgcg
     1441 ccattttcgg cggcgtgtgc gacagcgagc tgttcggcga agtgtcggca tttttcaaaa
     1501 aacacagcaa aggattgttt tactggatga cgctgaccag ccacgccgac tatcccgaat
     1561 ccgacatttt caaccacagg ctcaaatgca ccgaatacgg cctgcccgcc gaaaccgacc
     1621 tctgccgcaa cttcagcctg cacacccaat tcttcgacca actggcggat ttgatccaac
     1681 gccccgaaat gaaaggcaca gaagtcatca tcgtcggcga ccatccgccg cccgtcggca
     1741 acctcaatga aaccttccgc tacctcaaac aggggcacgt cgcctggctg cacttcaaaa
     1801 tcaaataaca acaatgccgt ctgaacgcac caacagcctt cagacggcat tttgcagaca
     1861 gaccgaccct tcaagcccac ttttttcatc atctccgata aattgctttg tatagtggat
     1921 taacaaaaac cagtacggcg ttgcctcgcc ttagctcaaa gagaacgatt ctctaaggta
     1981 ctgaagcacc aagtgaatcg gttccgtact atttgtactg tctgcggctt cgtcgccttg
     2041 tcctgatttt tgttaatccg ccataaagac cgtcgggcat ctgcagccgt cattcccgcg
     2101 caggcgggaa tccagaacgt ggaatctaaa gaaaccgttt tacccgataa gtttccgcac
//
LOCUS       DAWKJW010000216         2021 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.216, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000216 DAWKJW010000000
VERSION     DAWKJW010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.216"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            321..1778
                     /locus_tag="WJJ54_001880"
     CDS             321..1778
                     /locus_tag="WJJ54_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ7342691.1"
                     /translation="MSRHPAPTGEKTFFGHPFQLSTLFHIELWERFSFYGMQGILLIY
                     LYYTADKGGLGIDKTLAGGIVGAYSGSVYLSTILGAWFADRVWGAEKTLFLSGIVVML
                     GHIVLAAAPGLYGLLIGLIFIALGSGGVKSTASSMVGALYEQDEMRPLRDAGFSIFYI
                     AINIGGFLGPLLTGLLQENIGFHYGFGAAAVGMAFGLWRYSLGRKNLPHPTVPHPLSK
                     GQGKTAAAVGITLIAALATAIKTGLVNLDNFSGILLSTVILAVIAYFARLLTNPRVSS
                     DNKRHIIAYIPLFLTICMFWAVWFQIYTVATVYFDETVNRTIGSFTVPVAWKDSMQSL
                     WVILFSGLMAAMWTKMGRKQPKTPLKFAMAVFITGASFLGFVPFISSGTPMPIAVFAL
                     IVLAITIGELMISPIALSISTKIAPPLFKTQMVALNFLAFSLGFTLGGVLFEKGYQAG
                     DEIGFYRLLFYIGAATGFLLLLLVPKLNKMLEGTD"
BASE COUNT          457 a          600 c          462 g          502 t
ORIGIN      
        1 ggtttttgtt aatcctctat aatgcgccct tcggcgtggc ggatatataa ggaagtgatt
       61 ttccatctaa gtaaaaaccg ccctatcgga taagccctta acagaaaagg ctttacccgc
      121 gccgtatcgg aacacatcct ctaaaataca atccgttgaa ttgaaaaaaa tataaaaaca
      181 tccgcccgcg aaaaacggca gcgcgtcgtt tgacaaagaa tgaaaatatc ggttaaaaac
      241 cgattttcat acaaaaaaca ccgccgccgt ccgcatccgt ttcagacggt attgagagaa
      301 aatcttttag gagaaccttt atgtcccggc atcccgcccc caccggagaa aaaacattct
      361 tcggccaccc cttccagctt tccaccctct tccatatcga attgtgggaa cgtttttcat
      421 tttacggaat gcagggcatc ctgctgattt acctctacta caccgccgac aaaggcggct
      481 tgggcataga caaaaccctc gccggcggca ttgtcggcgc atacagcggc agcgtgtacc
      541 tgtccaccat tttgggggcg tggtttgccg accgagtatg gggtgcggaa aaaaccctct
      601 tcctctcggg catcgtcgtg atgctcggac acatcgtcct tgccgccgcc ccgggtctgt
      661 acggcctttt aatcgggctg atattcatcg cattgggcag cggcggcgtg aaatctacgg
      721 ccagttctat ggtgggcgca ttatacgaac aggacgaaat gcgcccgctg cgcgatgcgg
      781 gattttccat tttctacatc gccatcaata tcggcggctt cctaggcccg ctgctgaccg
      841 gcctgctgca ggaaaacatc ggtttccatt atggtttcgg cgcggcggcg gtcggtatgg
      901 cattcggctt gtggcgttat tccttgggac gtaaaaacct gccccacccc accgtccccc
      961 atccgctttc aaaaggacag ggcaaaactg cggccgccgt cggcatcacc ctcatcgccg
     1021 cacttgcaac cgccatcaaa accgggcttg tcaacctcga caatttctcc ggcatcctct
     1081 tatctaccgt catccttgcc gtcatcgcct atttcgcccg cctgctgacc aacccccgcg
     1141 tcagttccga caacaaacgg cacatcatcg cctacatccc gcttttcctg accatctgta
     1201 tgttttgggc ggtctggttt cagatttaca ccgtggcaac cgtctatttc gacgaaaccg
     1261 tcaaccgcac catcggttcg tttaccgtgc ccgtcgcctg gaaagattct atgcaaagcc
     1321 tgtgggtcat cctgttttcc ggactgatgg cggcaatgtg gacaaaaatg gggcgcaaac
     1381 agcccaaaac cccgctgaaa ttcgctatgg cggtatttat taccggcgcg tcgtttttgg
     1441 gattcgtccc ctttatttcc tccggtacgc cgatgcctat tgcggttttc gcactgatcg
     1501 tcctcgccat cacgataggc gaactgatga tttccccgat tgcgctgtcc atctccacca
     1561 aaatcgcacc gcctttattc aaaacccaaa tggtcgccct taatttcctt gccttttcat
     1621 taggcttcac tttgggcggc gtattgtttg aaaaaggcta tcaggcgggc gacgaaatcg
     1681 gcttctatcg gctgctgttc tacatcggcg cagccacagg cttcctgctg ctcctgctcg
     1741 tccccaaatt gaacaaaatg ctcgaaggca cagactaagt cccgccccga tgccgtctga
     1801 acccttcaga cggcattttt ccgcataatg aaaccaaacc gtttccaccc gacaggacag
     1861 gctcccccca accggaaggc agcctgccga ttgtcattta aatatctgac tgattccgtc
     1921 tgtttgcaag ggaaatagcc gtttatttcc gcttgggcgg aaaccggttc tattgagtaa
     1981 aaggcatttt atccgactaa attagtgctg catcaacgga a
//
LOCUS       DAWKJW010000217         1960 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.217, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000217 DAWKJW010000000
VERSION     DAWKJW010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.217"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(58..381)
                     /locus_tag="WJJ54_001881"
     CDS             complement(58..381)
                     /locus_tag="WJJ54_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEZ7342692.1"
                     /translation="MDMVVRGGIYLVSLDPTVGSEIKKTRPCVVVSPPEIHNYLKTVL
                     IVPMTSGSRPAPFRVNVRFQDKDGLLLPEQIRAVDKARLVKHLGNLDNSTAEKLFAVL
                     QEMFA"
     gene            complement(369..608)
                     /locus_tag="WJJ54_001882"
     CDS             complement(369..608)
                     /locus_tag="WJJ54_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="growth regulator"
                     /protein_id="HEZ7342693.1"
                     /translation="MILNIRKMGNSQGVILPKSLLGQIGAVDSLAVTVEKGNIILSCP
                     TVRRGWAEAAAMLVETEQEHFFSEIENEADKEWIW"
     gene            complement(731..1528)
                     /gene="truA"
                     /locus_tag="WJJ54_001883"
     CDS             complement(731..1528)
                     /gene="truA"
                     /locus_tag="WJJ54_001883"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEZ7342694.1"
                     /translation="MDTAQKQRWAITLSYDGSRFYGWQKQADGVPTVQAALETALAQI
                     AGEAVSTTVAGRTDTGVHATAQVVHFDTTAARPQQAWVRGVNAHLPEGIAVLHARQVA
                     PEFHARFDAYGRHYRYLLESAPVRSPLLKNRAGWTHLKLDIEPMRRAAAYLIGEQDFS
                     SFRAAECQAKSPVKTIYRADLTQSSGLVRLDLHGNAFLHHMVRNIMGALVYVGSGRLS
                     VEGFAALIQERSRLKAPPTFMPDGLYLTGVDYPEAYGIIRPQIPEWL"
BASE COUNT          438 a          461 c          557 g          504 t
ORIGIN      
        1 ccgtactggt ttaaagttaa tccactataa tgaacacaat caattcagac tattcaatca
       61 ggcaaacatc tcctgcaata ctgcaaacag tttttcagcc gtactgttgt ctaaatttcc
      121 aagatgcttg accaatctgg ctttatccac agccctaatc tgttcgggca aaagcaaacc
      181 gtctttatcc tgaaagcgga cattgacgcg gaacggggca ggacggcttc cgctcgtcat
      241 aggaacgatc agcacagtct tgagatagtt gtgtatttca ggaggagata ctacgacaca
      301 aggacgtgtc tttttgattt cgcttcctac ggtcgggtct aaggagacca gatagattcc
      361 gccgcgtact accatatcca ttctttatcc gcttcgtttt caatttcgga aaaaaaatgc
      421 tcctgctcgg tttcgacaag cattgcggca gcttctgccc atcccctgcg aacggtagga
      481 cagcttaaaa tgatattgcc cttttcaact gtaacagcca agctgtctac tgcccctatt
      541 tgacccaata atgatttggg cagaatcacg ccttgcgagt ttcccatttt gcgtatgttg
      601 agaatcatat acgtaccata tttacctgtt tatgtaataa caatgttagt accttgatga
      661 ggtagtgtca acatggaaaa agattgcctg acagtttgtc cgatttcaaa atctccgcga
      721 caagaatgtt ttaaagccat tcggggattt gggggcggat gatgccgtat gcctcgggat
      781 agtcgacgcc ggtcaggtaa agcccgtcgg gcatgaaggt cggcggggct ttgaggcggc
      841 tgcgttcttg aatcagtgcg gcgaagcctt cgacgctgag tctgccgctg ccgacataga
      901 cgagcgcgcc catgatgttg cgtaccatat ggtgcaaaaa ggcgttgccg tgcaaatcga
      961 ggcggacgag tcctgagctt tgggtaaggt cggcgcggta gatggttttg acgggggatt
     1021 ttgcttggca ttcggcggcg cggaagctgg agaagtcttg ttcgccgatc aaataggcgg
     1081 cagcccgacg catcggttcg atgtcgagtt tgaggtgtgt ccagcctgcc ctgtttttga
     1141 gcagggggga acggacgggg gcggattcga gcaggtagcg gtagtgccgt ccgtatgcgt
     1201 cgaagcgggc gtgaaattcg ggggcgacct gtcgggcgtg caaaacggca atgccttcgg
     1261 gcaggtgggc atttacgccg cgcacccatg cctgttgggg acgggcggca gttgtgtcga
     1321 agtggacgac ttgggcggtg gcatgcacgc cggtgtcggt cctgccggca acggtggtgg
     1381 aaaccgcttc ccctgctatt tgggcgagcg cggtttccaa tgccgcctga acggtcggta
     1441 cgccgtcagc ctgtttctgc cagccgtaaa agcggctgcc atcataggat agggttattg
     1501 cccagcgttg tttttgtgcg gtatccatcg gatttgggat tcggataaat gttcagactg
     1561 cattgtatcg cagattttgc agggaaacgg caaatgcccg gggcgcgcgg cgttgtttgg
     1621 ggagttgggg gggggatgca gttgctacga atcgctatcc tgtgaattca ccctgtcagg
     1681 agtgcccgaa tcgtcattcc cgcgcagtcg ggaatctagg acgtaaaatc taaagaaacc
     1741 attttatagt ggattaacaa aaaccagtac ggcgttgcct cgccttagct caaagagaat
     1801 gattctctaa ggtgctgaag cacgagtgaa tcggttccgt attatttgta ctgtctgcgg
     1861 cttcgtcgcc ttgtcctgat ttttgttaat ccactatatc cgataagttt ccgcaccgac
     1921 aaaactagat tcccactttc gtgggaatga cgggatgcag
//
LOCUS       DAWKJW010000218         1919 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.218, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000218 DAWKJW010000000
VERSION     DAWKJW010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1919)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.218"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            57..506
                     /locus_tag="WJJ54_001884"
     CDS             57..506
                     /locus_tag="WJJ54_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342695.1"
                     /translation="MQPGSKNDEKNKITLNEFNNAIVTIFSDENVVRAIGTINTMHGE
                     YLTRSHKIDQQKFLSDGERLSSKAKDFQHSAEKTQRALKEGIGRAASKFHANSKEAFV
                     ARKMQSDLQKKLNASNYNKQQYARQAVTALENASKAENKGNIAFYLN"
     gene            1063..>1919
                     /locus_tag="WJJ54_001885"
     CDS             1063..>1919
                     /locus_tag="WJJ54_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEZ7342696.1"
                     /translation="MYSNNAITNNRNNITLGAYRDAIISIFSDENVVRAIGTINSMYE
                     EYLTRSHKIDQKEFLREGERLSAKAREFQRTAEEAQKSLKEGIGRAASKFRGNSKEAF
                     VARKVQSDLQKALNASNYNKQQYARRAATALENASKSKVMAANLGKFTYGATVAMGTL
                     SMGSAWWKALDGEGNWSDVGLSSASFLGGLMGVQWGAALGVGAFGLLTGGAGWLVVGA
                     ILGGGAGAWWGSLGAEKAWRWFEDFLNLNRSDKYHVYDPLALDLDGDGIETVATKGFA
                     GALFDHRNQG"
BASE COUNT          635 a          249 c          417 g          618 t
ORIGIN      
        1 tatctaagtt gtagtctctt aataatataa tattttagtt gatggaaggt gttgtcatgc
       61 aacccggttc taagaatgat gaaaaaaata agattacact aaatgaattc aataatgcca
      121 ttgtaactat tttctctgat gaaaatgtgg ttagggcaat cggtacaatt aacacaatgc
      181 atggggagta tttaactcgt tcgcataaaa tagatcaaca aaaatttttg agtgatggtg
      241 agcggttgtc tagtaaagcg aaagattttc agcactcagc agaaaaaact caaagggctt
      301 taaaagaagg gattggaagg gctgctagta aatttcatgc caattcgaag gaggcatttg
      361 ttgcaagaaa aatgcaaagt gatttgcaaa agaagttaaa tgctagtaac tataacaagc
      421 aacaatatgc aagacaagca gtcacagctt tggaaaatgc ttcaaaagca gaaaataaag
      481 gtaatattgc attttatctt aactaaacta aaattagttt tcttgagagg aaagtattaa
      541 tggatttttt taattttttc gagcaaggat attttaaaaa actcgcggtt gaaaatggat
      601 taaatactga atattttata tttcaattta tagtatgtaa tctatttagt attttcgtta
      661 ttattttaat gaattttata aaaaattacg ctgtgcttat tgttttaata gtaattgtta
      721 gtatattatt tggactaatt ttaaaaaata aaactatgtc tttaataaag aataaagaaa
      781 aatttttatg tggtttgttt ccgttggatg tgccgatttt taaatataca atgcctagtt
      841 attttaaact tataaataag aatatgaggt ggctttttca catgaatgtt ttctgtttat
      901 tttttatttg tttttcaata tatctaatta ataaaggaga gaatcagtat attgcttatt
      961 ttagttgtta ttttttcgga cttacttatc cattaattaa ttatttgata ttattacaca
     1021 gagaatataa acgtattcag ttctaaattt ggaggtgcta ttatgtattc gaataatgct
     1081 ataactaata atagaaacaa tattacacta ggtgcgtata gggatgctat tatttccata
     1141 ttttctgatg aaaatgtggt tagggcgatt ggtacgatta actcaatgta cgaagaatat
     1201 ttgacccgtt cgcacaagat agatcaaaaa gaatttttaa gggagggtga gcgtctgtct
     1261 gctaaggcaa gagaattcca acgcacagca gaagaggcac aaaaaagctt aaaagaagga
     1321 attggaagag ctgctagtaa atttcgtggt aattcaaagg aggcatttgt tgcaagaaaa
     1381 gtacaaagtg atttgcaaaa agcattgaat gctagcaact ataacaagca gcaatatgca
     1441 agacgtgcgg caacagcgtt agagaatgct tcaaaatcaa aagttatggc agcgaatttg
     1501 ggtaagttta cttatggggc aactgttgcc atgggaactt tgagtatggg aagtgcttgg
     1561 tggaaagcct tggatggaga aggaaattgg agtgatgttg gtctctcatc agcttctttt
     1621 ttgggtgggc taatgggcgt ccaatggggt gcggctttgg gtgttggggc ttttggttta
     1681 cttactggtg gcgcaggttg gctagtagtt ggagctatac ttggaggtgg cgcaggagct
     1741 tggtggggat cattaggagc tgaaaaagct tggagatggt ttgaggattt cttaaatctt
     1801 aaccgcagcg acaaatacca cgtttacgac cccctcgccc tagatctaga cggcgacggt
     1861 atagaaaccg ttgccaccaa aggctttgca ggtgcattgt tcgaccaccg caatcaagg
//
LOCUS       DAWKJW010000219         1835 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.219, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000219 DAWKJW010000000
VERSION     DAWKJW010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.219"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            204..1283
                     /gene="apbC"
                     /locus_tag="WJJ54_001886"
     CDS             204..1283
                     /gene="apbC"
                     /locus_tag="WJJ54_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HEZ7342697.1"
                     /translation="MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVEQRSDGIHIALHF
                     GFPVAHIASETADRIQEILMPLTGDTHIHLSMDTEIGTHKVQPGVTTIKGVKNIIAVA
                     SGKGGVGKSTTTANLAAAMARMGARVGVLDADLYGPSQPTMLGVDDRKPDQKNQKLIP
                     VESSDGIQVMSIGFLVDTDQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGD
                     IQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICTNCG
                     HSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGTPAQLFDEHPAIARIYTDA
                     AFQIALGIADKGKDFSSRFPKIVVE"
BASE COUNT          440 a          574 c          472 g          349 t
ORIGIN      
        1 cgtgcattat acagcaccat cctacctcgt caagcaaatt ttacaggctt aattgcagac
       61 cactgtttgc acgggatatt ttgacaacgg attttcacaa tccgccgcat accgtgtaaa
      121 agttcgcaca aggaaaagca aaccgcccga aatcaatgta cactttccgc ccgtttccca
      181 aactgcacac agaaacacac attatgaaca tacaaaacat ccgcaccctc ctcgacaccg
      241 tcgccgttcc gaatacggca cgcacgctcg gcggcgaaaa ggccgtccgt tcggtcgaac
      301 agcgttcaga cggcatccat atcgccctgc atttcggctt ccccgtcgcg cacattgcct
      361 cagaaacagc cgaccgcata caggaaatcc tgatgccgct gacaggcgac acacacatcc
      421 atctgtccat ggacactgaa atcggcacac acaaagtcca gcccggcgtt accactatta
      481 aaggcgtgaa aaacatcatc gccgtcgcct ctggcaaagg cggcgtgggc aaatcaacca
      541 ccaccgccaa ccttgccgcc gcaatggcgc gcatgggcgc gcgcgtcggc gtactcgatg
      601 ccgaccttta cggcccgagc cagcccacga tgctgggtgt ggacgaccgc aaacccgatc
      661 agaaaaacca aaaactcatt cccgtcgaat cttcagacgg catacaggtc atgtctatcg
      721 gctttctcgt cgataccgac caagccgtcg tctggcgcgg gccgatggtc agccaagcct
      781 tgcagcaact gatgtttcaa agcgagtggg acgaagtgga ttatcttttc atcgacctgc
      841 cccccggtac cggcgacatc cagctcacgc tgtcccaacg catccccgtt accgggtccg
      901 tcatcgtaac cacgccgcag gacatcgcgc tgatagacgc gcgcaaggct gtggatatgt
      961 tccgcaaggt caacattccc attttaggcg tattggaaaa tatgtccgtc cacatctgca
     1021 ccaactgcgg acacagcgaa gccctgttcg gcacggacgg cggcaaagat ttagccgcac
     1081 gcctcaacgt ccccctgctc ggacagcttc ccctaagcct gcccgtgcgc gaagcaatgg
     1141 acggcggcac accggcgcaa ctgttcgacg aacaccccgc catcgcccga atctacaccg
     1201 atgccgcatt ccaaatcgcc ctgggcattg ccgacaaagg caaagacttc agcagccggt
     1261 tccctaaaat tgtcgtcgaa taaagccgcg tccgaaaccg caacagcaat gccgtcccaa
     1321 gccccgcgcc tgccggcggg cttcatagtc ctctctcccc gtgggagagg gctggagaga
     1381 gggcaacaag ccgcaaggct tgtattgggg cggttaagct gttgggaaag attgccgcaa
     1441 cttggagaat gccctctccc cggccctccc ccacagggga gggagcggat tgcggcaggt
     1501 tttgcggttg caggcggttt gaaaaacaga ttggatttac aaccgttgat gcaggtcgtc
     1561 tgaaaagcaa aaagcagcct gcacaacctg attagtttac aaaaccctta accccaacag
     1621 cctccccgtc ctctctcccc gtgggagagg gctggagaga gggcaacaag ccgaaaggct
     1681 tgtattgggg cggttgagtt gttgggaaag gttgccgcaa cttggaaaat gccgcctccc
     1741 cggccctccc ccacggggga gggagtgggt ttcggcagat ttttcggttg caggcgattt
     1801 gaaaggcaac ttagatttgc agctgttgtt tcagg
//
LOCUS       DAWKJW010000220         1827 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.220, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000220 DAWKJW010000000
VERSION     DAWKJW010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.220"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            324..1769
                     /gene="zwf"
                     /locus_tag="WJJ54_001887"
     CDS             324..1769
                     /gene="zwf"
                     /locus_tag="WJJ54_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEZ7342698.1"
                     /translation="MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILG
                     VSRSELDTEGFLAKVETSSKIHVKENFSDEAWASFVERLAYLKVDVTQPDDFAALGDL
                     VKARKETDNVVIYLSTAPKFFAQTCENLAKIGLNADNVRVVLEKPLGTDLASSQQINT
                     DVARYFKEGQIYRIDHYLGKESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGV
                     EERGEFYDITGALRDMVQNHLMQMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTVE
                     SVNENVVRGQYTAARGMNGYLEEINVPQDSFTETYVAIKAEIENERWKGVPFYLRTGK
                     RMAGKVAEIVLNFKDLNSHIFEGSRTAPNRLVIELQPYESVRLYTQMKTPGAGNKVET
                     VPLATDLGKALEGRRAEAYERLLLDVINGKLALFNRRDELEAAWEYVMPILENWTNNT
                     TPPHGYGAHSWGPEAARELLARDGHKWHEEQ"
BASE COUNT          497 a          422 c          488 g          420 t
ORIGIN      
        1 aaaggtatgc cgtctgaaag tgggaagcgg gtgttattat agtacaaaat ttgtaatttt
       61 gttacaaaaa aatcaggcat tgaaaagaaa tttgatttaa atcgtagaat ctttcgattg
      121 ttgtaacgga ataggggaaa cctgcccgat ttttggacta ggtcaaataa attgtaaaaa
      181 tgggaataga caaaaagtgt agcggtgtgt agtattacta ctcattatgc cacctgcctt
      241 tgtttccgat attgcgatgc agcgtgatgg ggaaaacagg tttcaaacgg catcgaaaaa
      301 ttctttcctg acgagataat acgatgagta cacaaacaaa ttttgatttg gtgttgttcg
      361 gtgcgaccgg cgatttggcg atgcgcaagc tgttgccctg tctgtaccag gcgcatgttg
      421 ccggtctgct tcatcccgaa gggcgtattt tgggggtcag ccgcagcgag ttggataccg
      481 aaggttttct ggcgaaggtg gaaaccagtt ccaaaatcca tgtgaaagaa aatttttccg
      541 atgaggcttg ggcatcgttt gtcgaacgtc tcgcatatct caaagtcgat gttacgcagc
      601 cggacgattt tgccgctttg ggcgatttgg tcaaagcgcg caaagaaacc gacaatgtcg
      661 tcatctatct ttccaccgcg ccgaaattct tcgcgcaaac atgtgaaaac cttgccaaaa
      721 tcggtttgaa cgccgacaac gtgcgtgtgg ttttggaaaa accgttgggt acggatttgg
      781 cttcttccca gcaaatcaat accgatgttg cgcgttattt caaagaaggg caaatttacc
      841 gcatcgacca ctaccttggc aaagaaagcc tgcaaaacct gcttgcgctg cgttttgcca
      901 atgtaatgtt cgagccgctg tggaacaata aatacatcga aagcgtgcag ttgaccatcg
      961 ccgaacagct cggtgtggaa gagcgcggcg agttttacga cattaccggc gcgttgcgcg
     1021 atatggtgca aaaccatttg atgcagatgc tgtgcatgac tgcgatggaa gcccccgcca
     1081 gcttggatgc cgacgcggtg cgcgatgaaa aagtcaaagt catcaagtca ttgaagccgc
     1141 tgaccgtcga gtctgtcaat gaaaacgtcg tgcgcggaca atataccgcc gccagaggca
     1201 tgaacggcta tcttgaagaa atcaacgttc cgcaagacag ctttaccgaa acctacgtcg
     1261 ccattaaagc cgaaatcgaa aacgaacgct ggaagggcgt tcccttctac ctgcgtaccg
     1321 gcaaacgcat ggcgggcaaa gtggcggaaa tcgttttgaa cttcaaagat ttgaacagcc
     1381 atatttttga aggcagccgc accgcgccca accggctcgt tatcgagttg caaccatatg
     1441 aatccgtgcg cctctatacg cagatgaaaa ccccgggggc aggaaataag gtcgaaaccg
     1501 tgccgctggc aaccgatttg ggcaaagcat tggaaggccg ccgcgcggaa gcttacgagc
     1561 gcctgctgct ggatgtgatt aacggcaaac tcgctttgtt caaccgccgc gacgaactcg
     1621 aagccgcgtg ggaatatgtg atgccgattt tggaaaactg gacaaataac accacgccgc
     1681 cgcacggcta cggcgcacac tcgtgggggc ctgaagccgc gcgcgaacta ttggcgcgcg
     1741 acggacacaa gtggcacgaa gagcagtaat acaataatgc gttcagacgg catggggttt
     1801 gaaatgccgt ctgaacgtaa gtaaagc
//
LOCUS       DAWKJW010000221         1813 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.221, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000221 DAWKJW010000000
VERSION     DAWKJW010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1813)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1813)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.221"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            9..221
                     /locus_tag="WJJ54_001888"
     CDS             9..221
                     /locus_tag="WJJ54_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease III domain protein"
                     /protein_id="HEZ7342699.1"
                     /translation="MELETVVPPEEGEGEGEGADGEMPEYLELHGGREDDISAPSQPE
                     PPTRNIKPLLFGLLIAFLGYLLGKIF"
     gene            256..1767
                     /gene="ubiB"
                     /locus_tag="WJJ54_001889"
     CDS             256..1767
                     /gene="ubiB"
                     /locus_tag="WJJ54_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HEZ7342700.1"
                     /translation="MKWLKRLTVIVGTFYRYRLAGLCASLMGSGWICALLKMMPQSSK
                     LKNEPPAVCLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS
                     REQIEKSLGQPIEKLYAEFETEPIASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQ
                     DLSLMRFGAAWVERLFADGRRLKPREVVAEFDKYLHDELDLMREAANAGQLGRNFQNS
                     DMLIVPKVFYDYCTSDVLTIEWMDGTPVSDIAKLKADGIDLHKLADYGVEIFFTQVFR
                     DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA
                     HIESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQ
                     LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVKWMNGQVGPKALWRNLKNEAPDWAQ
                     IIPSLPRKISALIDENRQQEMRDAYIHLVKVQQRQSLWLAVIAVVLLLILLLK"
BASE COUNT          402 a          486 c          493 g          432 t
ORIGIN      
        1 cactacatat ggagttagaa acggtcgtgc cgccggagga aggtgagggc gaaggagagg
       61 gcgcggatgg ggaaatgccc gaatatcttg aacttcatgg cgggcgggaa gatgatattt
      121 ccgcaccttc gcaacctgaa ccgccgaccc gcaatatcaa accgctgctt ttcgggctgc
      181 tgattgcctt tttgggctat ctgctcggta agattttttg attgtccgat aaatgctgta
      241 ttcgggattt tatatatgaa atggttgaaa cgcctgacgg tcattgtcgg gactttttac
      301 cgctatcggc tggcaggtct gtgtgcttcg ctgatgggta gcggttggat atgcgctctg
      361 ctgaaaatga tgccgcagtc gtccaaattg aaaaacgaac cgcctgccgt ctgtctgcgc
      421 cttgccttgg aaagcctggg gccgattttc atcaagttcg ggcaggtttt gtccacacgc
      481 cccgatttga ttccgcacga ttacgccgtc gaactggcaa agctgcaaga caaagtgccg
      541 ccttttgacg cgcggctttc gcgtgaacaa atcgaaaaat cgctgggtca gcccatcgaa
      601 aagctgtatg cggaatttga aaccgagccc atcgccagcg cgtccatcgc ccaagtacac
      661 aaagcccgcc tgcattcggg cgaacgagtg gctgtcaaag ttttgcgccc caaccttttg
      721 ccccttatcg aacaggattt gtcgctgatg cgtttcggcg cggcttgggt cgagcgtctg
      781 tttgccgacg gcaggcgtct gaagccgcgc gaagtggtgg cggagttcga caaatatctg
      841 cacgacgagt tggatttgat gcgcgaagcc gccaatgccg gacaactcgg acgcaatttc
      901 caaaacagcg atatgctgat tgtgccgaag gtgttttacg actactgcac cagcgacgta
      961 ctgaccatcg aatggatgga cggtacaccg gtatctgaca tcgctaaact caaagcagac
     1021 ggcattgatt tgcacaaact tgccgattac ggcgtggaaa tctttttcac gcaagttttc
     1081 cgcgacggct ttttccacgc ggatatgcac cccggcaata ttttggttgc cgccgacaac
     1141 cgctacatcg ccctcgattt cggcatcgtc ggcacgctga ccgattacga caaacgttat
     1201 ctcgccatca acttcctcgc cttcttcaac cgcgattacc ggcgcgtcgc caccgcccac
     1261 atcgaatcgg gctgggtgcc cgccgacacg cgcgcggaag agttggaagc ggctgtccgc
     1321 gccgtgtgcg aaccagtgtt caacaaaccg atttcgcaga tttccttcgg cttggtgctg
     1381 atgcgcctgt ttgaagtcag ccgccgcttc aatgtcgaaa tccagccgca gctggtattg
     1441 ctgcaaaaaa cgctgctcaa catcgaaggc ttgggacggc agcttgatcc cgatttggac
     1501 ttgtggaaaa ccgccaaacc gtttttggtg aaatggatga acgggcaggt cggccctaaa
     1561 gccctttggc gcaacctcaa aaacgaagcc cccgactggg cgcaaatcat tccttcattg
     1621 ccgcgcaaaa tcagtgcgtt gattgatgaa aaccgccagc aggaaatgcg tgatgcctat
     1681 atccatttgg tcaaagtgca gcagcggcaa agcctgtggc tggctgtgat tgcggttgtt
     1741 ttgctgctga ttttgctttt gaaataggct ttgtccgaat catcgcccga ctccgcccgt
     1801 ttataaggaa atc
//
LOCUS       DAWKJW010000222         1803 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.222, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000222 DAWKJW010000000
VERSION     DAWKJW010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1803)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1803)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.222"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(188..844)
                     /locus_tag="WJJ54_001890"
     CDS             complement(188..844)
                     /locus_tag="WJJ54_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEZ7342701.1"
                     /translation="MKNKSKVWDFPTRLSHWLLAASLPFMWYSAKTGGDMLQWHTRVG
                     LFILFLLVFRLCWGIWGSDTARFSRFVRGWSGIREYMKNGIPEHVQPGHNPLGALMVV
                     ALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAIH
                     IAAVAAYRVFKKKNLVLPMITGFKYIEGKTSIRFAGKTALAAALSVAALAAAAILLLS
                     "
     gene            909..1799
                     /locus_tag="WJJ54_001891"
     CDS             909..1799
                     /locus_tag="WJJ54_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEZ7342702.1"
                     /translation="MFPVFHLSGESRRRMLQAASRFPYVFKARAEDSHKGTFGTLAVV
                     GGAVGMSGAPVLAASAAMYLGCGKVWAGFNQETLPFAVIAGFPEIMLDTADGLTKRQD
                     INAWVVGCGLGTGRAAVRTLAGILAEHTDKPVLLDADALNILSTDAETRNLARECKNL
                     ILTPHPAEAARLLGTTVAQVQADRTAAVRKIGAIFGATVVLKGHKTLVAASDTEIYVN
                     ESGNAGLATAGSGDVLGGIIGSLLAQGVPVFEAACAGAWLHGAAADVIKESAGIAAGL
                     LAGEIAPAARWLRNRITESM"
BASE COUNT          394 a          433 c          588 g          388 t
ORIGIN      
        1 aatcggttct gtactatccg tactgtctgc ggcttcgtct ccttgtcctg atttttgtta
       61 atccactata aaacggtttg ggacggaaaa acggcctgaa gccgtttcgg gcattcagac
      121 cgtttgcgcg gagaggggat gccgtccgaa gggcgaaaag ggcttcagac ggcattgatg
      181 tcgggtttca ggacaggagc aggatggcgg ctgcggcaag cgcggcaacc gataatgcgg
      241 cggcaagcgc ggttttgccg gcaaagcgga ttgaggtttt gccttcgatg tatttgaagc
      301 cggttatcat cgggaggacg aggtttttct ttttgaacac gcggtatgcg gcgacggcgg
      361 cgatatgaat ggcggaaaaa acggcgagca gcttgaaaaa gttgaggtgg attttccgca
      421 taaggctgcc cgtatgctcg gaaaccaaat ggttgaggta gccgttggtg ctgaaggtgt
      481 tttcatcggc ggcaaaaagc cctgtgccga cttgaaatga gacggcggcc aaaagcgcga
      541 cgaccatcag tgcgcccaag gggttgtgtc cgggttggac gtgttcggga ataccgtttt
      601 tcatatactc tctgataccc gaccatccgc ggacgaaacg ggagaaacgg gcggtatcgc
      661 tgccccaaat gccccagcag aggcggaata cgagcaggaa aaggataaac agcccgacgc
      721 gcgtgtgcca ttgcagcata tcgccgccgg ttttcgcgct ataccacata aagggtaggg
      781 atgcggcaag cagccagtgg gaaaggcggg tggggaagtc ccagactttg cttttgtttt
      841 tcataatcgg tttccggcgg tagaatcggt ttgttttcga gccttaattt taaccgattg
      901 gaggggaaat gtttcccgtt ttccatcttt caggcgaaag ccgccgccgg atgcttcagg
      961 cggcatcgcg ttttccctat gttttcaaag cccgtgcgga agattcgcac aaagggactt
     1021 tcggcacgct cgccgtagtc ggcggcgcgg tcggcatgag cggcgcgccc gtattggcgg
     1081 catcggcggc aatgtatctc ggctgcggca aagtgtgggc gggtttcaat caggaaacgc
     1141 tgcctttcgc cgtcattgcc ggttttcccg aaattatgtt ggacacggca gacggtttga
     1201 ccaagcgtca agatataaac gcctgggttg tcggttgcgg cttgggtaca ggtagggcgg
     1261 cggtcagaac gcttgccgga attttggctg aacacacgga caagcccgtt cttttggatg
     1321 cggacgcgct gaacatatta tcaaccgatg ccgaaacccg aaatctggca cgcgagtgta
     1381 aaaacctgat tttaacgcca caccccgccg aagccgcgcg cctgcttgga acgacggttg
     1441 cacaggttca ggcggatcgg acggcggcag tgaggaagat aggggcaatt ttcggcgcaa
     1501 ccgtggtttt aaaggggcac aaaacattgg ttgccgcgtc cgatacggaa atctatgtca
     1561 acgaaagcgg caacgcggga ttggcaacgg cgggcagtgg cgacgtattg ggcggcatca
     1621 tcggcagtct gctcgcacag ggcgtgccgg tttttgaagc cgcctgcgcg ggcgcgtggc
     1681 tgcacggcgc ggcggcggat gtcataaaag aatcggcagg cattgcggca gggctgttgg
     1741 caggggaaat cgccccggcg gcaaggtggc tgcgtaaccg gataactgaa agtatgtaag
     1801 aag
//
LOCUS       DAWKJW010000223         1771 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.223, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000223 DAWKJW010000000
VERSION     DAWKJW010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1771)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1771)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.223"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(541..1599)
                     /gene="alr"
                     /locus_tag="WJJ54_001892"
     CDS             complement(541..1599)
                     /gene="alr"
                     /locus_tag="WJJ54_001892"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEZ7342703.1"
                     /translation="MRPLNVQIRLGNLRHNYRILKEMHGGKLLAVVKADAYGHGAVRC
                     AFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQ
                     WQLEALLSRHWKKPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFS
                     CADEPESGMTEIQMEAFDLGTEGLEGEESLANSAAILNVPEARRDWGRAGLALYGISP
                     FGGSDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRR
                     APSNSPVAVDGKLTRVIGRVSMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGT
                     IPYELMCNIKRAKFTYIE"
BASE COUNT          445 a          449 c          397 g          480 t
ORIGIN      
        1 atccctgtgt ccttatttct gctttcttac gtcattcttt taaaggtggg aatctggaaa
       61 ccaaaaaaca acaggaattt atccgaaaca acaaaaccta tccgccggca tccccgcgaa
      121 agcgggaatc tagtttgttg ttcaaataaa ttctgaaact ttaattttgt cattcccgcg
      181 caggcgggaa tctagaaatg aaaaacgacg agaatttatc agaaatgacg gaaactcaaa
      241 aaaccggatt cccgcctgcg cgggaatgac gaaattttag gtttctgatt ttgattttcc
      301 gtttttgcgg gaaggatggg gtttcagatt gtgggcatta tcagtatttt ctatttggca
      361 atgtctttta taatggatta aatttaaacc agtacggcgt tgcctcgcct tgccgtacga
      421 tttgtactgt ctgcggcttc gtcgccttgt cctgattttt gttaatccac tatactgatt
      481 ttgtcaaaac gcatttatgc cgtctgaaag gcttcagacg gcatttttgt ttggacttga
      541 ttactcgata taagtgaatt ttgcacgttt gatattgcac atcaattcgt aagggatggt
      601 tccggccgct tcggcaacag tattgatgtt gaccgtatcg ccccacagtt cgacctcgtg
      661 tcccaaacct tcttgcgaag cgtccagctc gatggtcatc atatccatag agaccctgcc
      721 gatgacccgg gtcaatttac cgtcgacggc gacgggggaa ttgcttgggg cgcggcgcgg
      781 ataaccgtcc gcataaccgc aggcaatcag accgacgcgc gtagatttgc tggtataaaa
      841 tgttgcgcca taaccgatag gggagtgcgg ctgtaaaacg cgttcgccaa aaatacgggt
      901 tgaaagcctc atcacgggtt tcagcctgtc atcgctgcct ccgaacgggg aaatgccgta
      961 taacgccaag cccgcgcgcc cccaatccct gcgtgcttcg ggaacattca aaatagccgc
     1021 cgaattggca aggctttctt cgccttccag cccttccgta cccaaatcga atgcttccat
     1081 ctgtatttcc gtcataccgc tttcgggttc gtccgcacag gagaaatgcg agaacttgac
     1141 aatactgtcc acatattccg actgcttcaa tgccgcatat gccgaagcgt aatcatgagg
     1201 gaaaaatccg gtacggtgca ttcccgaatc cattttcaac cagaccttga caggtttttt
     1261 ccaatggcgg gaaagcaaag cctcaagttg ccattggttt ccgactgccg gccagagcga
     1321 gtattgttcg accgcttcgt actctgatgc ttcaaatacg ccttccaaaa ggacaatcgg
     1381 atgggtaatg ccactctccc gcagcctgat tccctcgtcg attgtcgcca cggcaaagcc
     1441 gtctgccaag tctgccagcg cgaaagcaca tctgaccgca ccgtgtccgt atgcgtcggc
     1501 cttcactacc gccaacagtt tgcctccgtg catttccttc aaaatccgat aattgtgcct
     1561 aaggttgccc aacctgatct gcacgttcaa agggcgcata aattcattcc ttaccaaaca
     1621 agtgtttatt agcaaaatta agaaatcaat tagggaatta taatccaacg gcaaggcttt
     1681 taaaatatta aagacccttg tatcttcaag ccgaagcagc agtttttagg taggaaggcg
     1741 gtttgctttt cctgatataa tcgctttccc a
//
LOCUS       DAWKJW010000224         1737 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.224, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000224 DAWKJW010000000
VERSION     DAWKJW010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.224"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            128..1570
                     /gene="aldA"
                     /locus_tag="WJJ54_001893"
     CDS             128..1570
                     /gene="aldA"
                     /locus_tag="WJJ54_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HEZ7342704.1"
                     /translation="MKQLAMYINGRFENDFNGEWRDVLNPSTEEAIAREPKGGRADVD
                     RAVAAARAAQPAWERLPAVERGAYLRKIAQGIRERADELTDTIVAEGGKTKDLARVEV
                     MFTADYLDYQAEWARRYEGEIIQSDRPRENILLFKRPLGVIAGILPWNFPFFLIARKM
                     GPALVTGNTIVVKPSSVTPINCHIFAEIVDAVGLPAGVFNVVNGPGAEIGNALSAHPQ
                     VDMVSLTGSVEAGRQVMEAASANITKVSLELGGKAPAIVLKDADLDLAVKSILASRVG
                     NTGQICNCAERVYVHSSLKDAFIEKMTAAMKGVRYGNPAEAEAGALEMGPLIEERAVK
                     AVAEKVERAVKQGAKLVCGGKRAEGRGYFFEPTLLTDTDNSMDIMKEETFGPVLPVSA
                     FDTLDQVIALANDCEFGLTSSVYTTNLNEAFYVTRRLQFGETYINRENFEAMQGFHAG
                     WKKSGIGGADGKHGLEEYLQTQVVYLETDI"
BASE COUNT          453 a          485 c          451 g          348 t
ORIGIN      
        1 tataaattag cagaacaata tgcagacata gtagcttctc gtctaaacat ttcaaaagaa
       61 acttgtacgg taatttattt gggaataaac taaaactaca tctgactaca aaactggaga
      121 acccgaaatg aaacaattgg ccatgtacat caacggacgc tttgaaaacg atttcaacgg
      181 cgaatggcgc gacgtattga acccgtccac cgaagaggcc atcgcccgcg aacccaaagg
      241 cggcagggcg gacgttgacc gcgccgtagc ggcggcgcgt gcggcgcaac cggcttggga
      301 gcgtctgcct gcggtcgaac gcggcgcgta tttgcgcaaa atcgcccaag gcatacgcga
      361 acgcgccgac gagctgaccg acaccatcgt tgccgaaggc ggcaaaacca aagacttggc
      421 gcgcgtggaa gtgatgttca ccgccgacta tctcgattac caagccgaat gggcgcgccg
      481 ttacgaaggc gaaatcatcc aaagcgaccg cccgcgcgaa aacattttat tgttcaaacg
      541 tccgctgggc gtaattgccg gcattttgcc gtggaacttc cctttcttcc tgattgcccg
      601 caaaatgggt cccgccttag taacgggcaa caccatcgtt gtcaaaccca gcagcgtaac
      661 cccgatcaac tgccacatct tcgccgaaat cgtcgatgcg gtcggattgc ccgcaggcgt
      721 gttcaacgtg gtgaacggtc cgggtgcgga aatcggcaat gccttgtctg cccatccgca
      781 agtcgatatg gtcagcctga ccggctccgt cgaagcaggc cgccaagtga tggaagccgc
      841 ttccgccaac atcaccaaag tttcgctgga actcggcggc aaagcccccg ccatcgtttt
      901 gaaagacgcg gatttggatt tggcggtgaa atccatcttg gcttcgcgcg tcggcaacac
      961 cggtcaaatc tgcaactgcg ccgagcgcgt ttatgtccac agcagtctga aagacgcatt
     1021 cattgaaaaa atgactgccg ccatgaaagg cgtgcgctac ggcaaccctg ccgaagccga
     1081 agcaggcgcg ctggaaatgg gcccgctgat tgaagagcgc gccgtcaaag ccgttgccga
     1141 aaaagtggaa cgggcagtca aacaaggtgc gaaactggtc tgcggcggca aacgcgccga
     1201 aggacgcggt tatttcttcg agccgaccct gctgaccgac accgacaaca gtatggacat
     1261 tatgaaagaa gaaaccttcg gccccgttct gcccgtttcc gctttcgaca cgcttgacca
     1321 agtcatcgca ctggctaacg attgcgagtt tggtctgacc agttctgttt atacgactaa
     1381 tttaaacgaa gccttctacg ttacccgccg cctgcaattc ggcgaaacct acatcaaccg
     1441 cgaaaacttt gaagccatgc aaggcttcca cgcgggctgg aaaaaatccg gcatcggcgg
     1501 cgcggacggc aaacacggtt tggaagaata tctgcaaacc caagtcgttt atctggaaac
     1561 cgacatttaa tgccgcttta aaaccccgat agaaaatgcc gtctgaaccc gttttcaggt
     1621 tcagacggca tttttacagt ttcaccggca atcagtcatg accgacatcg atgtttttgt
     1681 ctttgtatag tggattaaca aaaatcagga caaggcgacg aagccgcaga cagtaca
//
LOCUS       DAWKJW010000225         1733 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.225, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000225 DAWKJW010000000
VERSION     DAWKJW010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.225"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            356..1660
                     /locus_tag="WJJ54_001894"
     CDS             356..1660
                     /locus_tag="WJJ54_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEZ7342705.1"
                     /translation="MKKHIWAASLLPASLSAEPLNWWKPYSAVNSGDTAWVMTAAALV
                     LLMTLPGLALFYGGMVRKKNLLSTMMHSFSIATLVGILWVAVGYSLAFTPGNAFIGGL
                     GRVFLSGMQIDAAAQMLTVSPNAPTVPEPVFMFFQMTFAIISTAIITGAFAERMKYSA
                     MMLFSGIWFLLVYVPGAHWVWGGGFMSKGGVLDYAGGTVVHINAGIAGLVAALVLGRR
                     IGYGREAMPPHNMAMTLIGAAMLWFGWFGFNAGSALAADAAAGMAMAVTQVSAVFGAA
                     GWLACEKIAGHKPSALGLASGAVSGLVGITPAAGFTGPSGAAAIGILTAAACFVSVTV
                     VKHKLRYDDSLDAFGIHGFGGLVGGILTGIFFDNRIFGGDAAVWQQLWIQVKDGFVMA
                     AYSGLMSWAILKVVGKICGGLRVGKDVEREGLDLNIHGERVE"
BASE COUNT          355 a          432 c          513 g          433 t
ORIGIN      
        1 aattaaaaat ttttaatata ttaatcaata aattaatttt ataaaataaa aatattgtca
       61 acaatatttt gccttatcgc ccaaacctct gtatattttc ctacagtaaa ttgttgacaa
      121 tccatacgcc cacatatgcg ccgcctaagg ataaatcctc ccgccggaca acgggtgcaa
      181 gggattggat gcgatatttc catattcaaa caagggattt gtttcacgca cagggcggca
      241 catcggcaaa atccccgcgc cgccccggtc cggcagggct tgcgtccctc ccggacaagc
      301 cccgaccccg cctttccgaa agacgggctc aaccattaag gaaactttaa tcaaaatgaa
      361 aaaacacata tgggcggcat ctttgctgcc ggcatcccta tcggcagaac ctttaaactg
      421 gtggaagcct tattccgccg tcaattcggg cgataccgcc tgggtgatga ctgcggctgc
      481 cttggtactg ttgatgacgc ttcccgggct ggctttattc tacggcggga tggtgcggaa
      541 aaaaaacctg ctctcgacga tgatgcacag cttttccatc gcgacattgg tgggcatcct
      601 ttgggtcgcc gtcggctatt ctttagcgtt cacgccggga aatgccttta tcggcggttt
      661 ggggcgcgta tttttaagcg ggatgcagat agacgctgcc gcacagatgc tgaccgtgtc
      721 gcccaatgcg ccgactgttc ccgaaccggt atttatgttt tttcagatga cgtttgccat
      781 tatttcgacc gccattatta ccggcgcgtt tgccgaacgg atgaaatatt cggcaatgat
      841 gctgttttcg ggcatatggt ttttattggt ttatgtgccg ggagcgcatt gggtgtgggg
      901 cggcggcttt atgagcaagg gcggcgtatt ggattatgcc ggcggtacgg tggtgcacat
      961 caatgccggt atcgcgggac tcgtcgccgc cttggttttg ggcaggcgca taggctacgg
     1021 gcgcgaggcg atgcctccgc acaatatggc gatgacactg atcggcgcgg caatgttgtg
     1081 gttcggctgg ttcggcttta acgccggatc ggcgcttgcg gcagacgcgg cggcgggtat
     1141 ggcgatggcg gtaacgcagg tgtcggccgt attcggcgcg gcaggctggc ttgcctgcga
     1201 aaaaatagcg ggacacaaac cttccgcttt ggggctggct tccggcgcgg tttccggtct
     1261 ggtcggcatc acccctgccg ccggctttac cggcccgtcg ggcgcggccg ccatcggtat
     1321 attgactgcc gccgcgtgct ttgtgtccgt caccgtcgtc aaacacaaat tgcgttacga
     1381 tgattctttg gacgctttcg gcatacacgg attcggcggg ctggtgggcg gaatattgac
     1441 cggcatcttt ttcgacaacc gcattttcgg cggggatgcg gcagtttggc agcagttgtg
     1501 gatacaggta aaagacgggt tcgttatggc ggcatacagc gggctgatga gttgggcgat
     1561 tttgaaggtc gtggggaaaa tctgcggcgg cctgcgcgtc ggcaaggatg tcgaacgcga
     1621 aggtttggat ctgaatatcc acggcgaacg cgtggaataa gggcggttat gccgtctgaa
     1681 gcctgaaaat cgggtttcag acggcatttt tcacgtttgc cgccgatgga taa
//
LOCUS       DAWKJW010000226         1699 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.226, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000226 DAWKJW010000000
VERSION     DAWKJW010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.226"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            59..1432
                     /locus_tag="WJJ54_001895"
     CDS             59..1432
                     /locus_tag="WJJ54_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEZ7342706.1"
                     /translation="MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLL
                     AAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSY
                     IKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLD
                     EADRMLDMGFIDDIRKIMQMLPKQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQN
                     TTNANVEQHIIAVDTIQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSA
                     QAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYV
                     HRIGRTGRAGADGVAISLMDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKP
                     EKTEMREPRQRNRYESARAQREKNTRPETTANDAGAACGKIAGRSRRSRREHRTCALL
                     QPRYGVK"
BASE COUNT          438 a          557 c          407 g          297 t
ORIGIN      
        1 cccatcctat cggtttcccg cttcagacgg cataaggtct gaaagaaaga ctacaattat
       61 gagtaatcca ttttcctctt taggtttggg tacggaactc gtttccgcac tgaccgcgca
      121 aggttacgaa aacccgacgc ccatccaagc cgccgccatt cccaaagcac tcgccggtca
      181 tgatttacta gccgccgcgc aaaccggcac gggcaaaacc gccgccttta tgctgccctc
      241 gctcgaacgc ctcaaacgtt acgccaccgc cagcacctcg cccgcgatgc accccgtgcg
      301 tatgctcgtg ttgaccccca cgcgcgaact cgccgaccaa atcgaccaaa acgtgcagtc
      361 ctacatcaaa aacctgccgc tgcgccacac cgtcttgttc ggcggtatga atatggacaa
      421 acagaccgcc gatttgcgtg ccggctgcga aatcgtcgtc gccacagtcg gacggctgct
      481 cgaccacgtc aaacaaaaaa acatcagttt gaacaaagtc gaaatcgtcg ttctagacga
      541 agcagaccgc atgttggata tggggtttat cgacgacatc cgcaaaatca tgcagatgct
      601 gcccaaacaa cgccaaaccc tgctcttttc cgctaccttc tccgcaccga tacgcaaact
      661 ggcgcaagac ttcatgaacg cgcccgaaac cgtcgaagtc gccgcgcaaa acaccaccaa
      721 cgccaacgtc gaacaacaca tcatcgccgt cgataccatt cagaagcgca acctgctcga
      781 acggctgatt gtcgatttgc atatgaacca ggtcatcgtg ttctgcaaaa ccaaacaaag
      841 cgtcgaccgc gtaacgcgcg aactggtgcg ccgcaacctg tccgcacagg cgatacacgg
      901 cgaccgttcc caacaaagcc ggctcgaaac actcaacgcc ttcaaagacg gcagcctgcg
      961 cgtcctcgtc gccaccgaca tcgccgcgcg cgggctggac attgccgaac tgcccttcgt
     1021 catcaattac gaaatgcccg cccagcccga agactacgtc caccgcatcg ggcgcacggg
     1081 gcgcgcgggc gcggacggcg tggcgatttc cctgatggac gaatccgaac agaaaatgtt
     1141 tgaatccatt aaagagctga ccggcaacaa gctgctcatc gagcgcatcg agggcttcga
     1201 gccgcaatgg tgggaacagg gcggcgcaaa accggaaaaa accgaaatgc gcgaaccgag
     1261 acaacgcaac cgctacgaat ccgccagggc tcagcgcgaa aaaaataccc gaccggaaac
     1321 cacggcaaac gatgcgggcg cggcttgcgg aaaaattgcc ggacgcagcc gccgaagccg
     1381 tcgggaacac cggacgtgcg ccctgctcca accgcgttac ggcgtaaaat aaccctgaaa
     1441 atcaaatgcc gtctgaacat ttcccgtttc agacggcatt tttcaaaccg gactgacgca
     1501 tcgggagcaa ccgcccgcac cggataaatt tcttccgcaa acagtttcag acggcatttg
     1561 ctgcctgtac aatatcattt ccttttccac tcaaaccatc aggatttccc aatgtccacc
     1621 caattcgatg tcgccgtaat cggcgcaggt ccggcaggct cggtcgcatc cgccctgctc
     1681 cgcaaaaaag gttatagtg
//
LOCUS       DAWKJW010000227         1673 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.227, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000227 DAWKJW010000000
VERSION     DAWKJW010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.227"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(195..1355)
                     /locus_tag="WJJ54_001896"
     CDS             complement(195..1355)
                     /locus_tag="WJJ54_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEZ7342707.1"
                     /translation="MRKKLTALVLSALPLAAVADVSLYGEIKAGVEGRNYQLQLTEQP
                     SKAQGQTNNQVKVTKAKSRIRTKISDFGSFIGFKGSEDLGEGLKAVWQLEQDVSVAGG
                     GATQWGNRESFVGLAGEFGTLRAGRVANQFDDASQAIDPWDSNNDVASQLGIFKRHDD
                     MPVSVRYDSPDFSGFSGSVQFVPAQNSKSAYTPAYVDEQSKYHAAVVGKPGSDVYYAG
                     LNYKNGGFAGNYAFKYARHANVGRDAFELFLLGSGSDQAKGTDPLKNHQVHRLTGGYE
                     EGGLNLALAAQLDLSENADKTKNSTTEIAATASYRFGNAVPRISYAHGFDFIERGKKG
                     ENTSYDQIIAGVDYDFSKRTSAIVSGAWLKRNTGIGNYTQINAASVGLRHKF"
BASE COUNT          425 a          432 c          389 g          427 t
ORIGIN      
        1 tatatgtgca aaccaagccg aaaatgcgaa ataccgtctg aaaatctttc agacggtatt
       61 tgctgtcttt attgccgttt ttcttccgta tccggatttt tgtttggggc tgaagcagat
      121 tggcagtcag attgcaatca aagaatgaag gcgagccgtc aaaaacaaag ctatccgctt
      181 caccgccccg atatttagaa tttgtggcgc aaaccgacgg aggcggcatt aatttgagtg
      241 tagttgccga tgccggtatt gcgtttcagc caagcgccag acacgatggc ggaagtgcgt
      301 ttggaaaaat cataatcaac gccggcgatg atttgatcgt agctggtatt ttcgcctttt
      361 ttaccgcgtt cgataaagtc gaaaccatgg gcatagctga tgcgcggaac tgcattaccg
      421 aagcggtagg aagcagtggc ggcaatttcg gtcgtactgt ttttggtttt gtcggcattt
      481 tcagacaaat ccaactgggc cgccaaggcg agattcaagc cgccttcctc atagccgccc
      541 gtcaggcggt gtacctgatg gtttttcaag ggatcggtac ctttggcttg atcactcccg
      601 ctgccgagca agaacaactc aaaagcatca cgtccgacat tggcgtgtct cgcatattta
      661 aaggcatagt tcccggcaaa accgccattt ttataattca gaccggcata atacacatcc
      721 gatccgggct tgccgacaac agccgcatga tacttactct gctcatccac ataagccggc
      781 gtataggcgg acttgctgtt ttgagccgga acgaattgga cgctgccgct gaaaccggaa
      841 aagtccggag agtcgtagcg tacggaaacc ggcatatcgt cgtggcgttt gaaaataccc
      901 aattgcgaag ccacatcatt gttgctgtcc caaggatcaa tggcttggct ggcatcgtca
      961 aactgatttg caacgcgacc ggcgcgcagc gtaccgaatt cgcctgccaa gccgacaaag
     1021 gattccctgt tgccccactg ggtcgcgccg ccgccggcaa cggatacgtc ttgctcaagc
     1081 tgccaaacag ccttcagccc ttcgcccaaa tcctcgctcc ccttaaagcc gataaacgag
     1141 ccgaaatcgc tgattttcgt cctgatgcgg ctttttgcct tagtaacttt tacctgattg
     1201 ttcgtttgac cttgagcctt tgagggctgc tcggtcaatt gcagctggta gttcctgcct
     1261 tccacgccgg ctttgatttc gccgtacagg ctgacatcgg caacggccgc aagcggcagt
     1321 gcggacaata cgagggcagt aagttttttt cgcatatcgg cttccttttg taaatttgat
     1381 aaaaacctaa aaacatcggg caaacacccg atacgtcttc aattataccc ccccccccgc
     1441 aaaaaaccat ttttcagaac aaatatctga taaatgccgc aacctttatt ttaaaaatga
     1501 ttatattttg atataaaaca atagcttatt ttttcaaaaa acgttgtgtt tctacaacac
     1561 aattcaagcg cagacctcgt gcgggccgat gcgctgctgc ccggatgcag tctcggcttt
     1621 ttaaaacgcc ataaaaaaac acacgcggca ctttatagtg gattaacaaa aac
//
LOCUS       DAWKJW010000228         1660 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.228, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000228 DAWKJW010000000
VERSION     DAWKJW010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.228"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..731)
                     /gene="rfbA"
                     /locus_tag="WJJ54_001897"
     CDS             complement(<1..731)
                     /gene="rfbA"
                     /locus_tag="WJJ54_001897"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEZ7342708.1"
                     /translation="MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIRDILVITAPEDNASFKRLLGDGSDFGISISYAVQPSPDGLAQAFIIGEEFIGNDNV
                     CLVLGDNIFYGQSFTQTLKQAAAQTHGATVFAYQVKNPERFGVVEFNENFRAVSIEEK
                     PQRPKSDWAVTGLYFYDNRAVEFAKQLKPSARGELEITDLNRMYLEDGSLSVQLLGRG
                     FAWLDTGTHESLHEAASFVQTVQNI"
     gene            complement(794..>1660)
                     /gene="rfbB"
                     /locus_tag="WJJ54_001898"
     CDS             complement(794..>1660)
                     /gene="rfbB"
                     /locus_tag="WJJ54_001898"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEZ7342709.1"
                     /translation="RVFAEHQPDAVMHLAAESHVDRSIDSAGEFIQTNIVGTFNLLEA
                     ARAYWQQMPSEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKVSSDH
                     LVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWL
                     FVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYE
                     DLITFVQDRPGHDVRYAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQNVLN
                     GSYRLERLGTGK"
BASE COUNT          367 a          416 c          471 g          406 t
ORIGIN      
        1 tggatgtttt gcacggtttg gacgaatgaa gccgcctcgt gcaggctttc gtgcgtgccg
       61 gtgtccaacc atgcgaaacc gcgtcccaac agttgtaccg acaatgaacc gtcttccaaa
      121 tacatccggt tgaggtcggt aatttccaat tcgccgcgtg cggacggttt gagctgtttg
      181 gcgaactcga cggcgcggtt gtcgtagaaa tacaagccgg ttaccgccca atcggatttg
      241 ggccgttgcg gtttttcttc gatggaaacg gcgcggaagt tttcgttaaa ttcaaccacg
      301 ccgaaacgtt cggggttttt gacctgataa gcaaacacgg ttgcgccgtg cgtttgcgct
      361 gccgcctgtt tcaatgtttg cgtaaacgac tgaccgtaaa aaatattgtc gcccaaaacc
      421 aagcaaacat tgtcgttgcc gataaattct tcgccgatga taaatgcctg tgccaagccg
      481 tccggactgg gttgcacggc ataactgatg gaaatgccga aatcgctgcc gtcgccaagc
      541 aggcgtttga aagaggcgtt gtcttcaggc gcggtaatca ccaaaatatc gcggattccc
      601 gccagcatca aaaccgacaa ggggtaataa atcatcggtt tgtcgtacac gggcaggagc
      661 tgtttggata cgccgcgcgt gatggggtag aggcgcgtgc cgctgccgcc tgccagtatg
      721 atgcctttca tcttttcttt cttcctttgc gatgggtttt cagacggcat tgcgtcggga
      781 tgccgtctga aaactatttt ccagtaccta aacgttccaa acgatagctg ccgttcaata
      841 cattttgcca ccaggttttg ttgtccagat accattgcac ggttttgcgg aggccggact
      901 cgaaggtttc caaaggcagc cagcccaaat cccgcctgat tttggctgcg tcgacggcgt
      961 agcgtacgtc atggccgggg cggtcttgta cgaaagtaat caaatcttca taacgcgcca
     1021 caccggccgg tttttcggga gcgagttctt ccagcagggc gcagatggtt ttgacgactt
     1081 caatattggc tttttcattg tggccgccga tattgtaggt ttcgccgaca acaccttcgg
     1141 taacaacctg atacagtgcg cgcgcgtggt cttcgacaaa cagccagtcg cggatttgca
     1201 taccgtcgcc gtacacaggc agcggtttgc cgtcaagcgc gttcagaatc atcaaaggaa
     1261 tgagtttttc cggaaaatgg taaggaccgt agttgttgga gcagttggtt acaatggtcg
     1321 gcaagccgta agtacgcaac cacgcgcgga cgaggtggtc gctggacact ttagaggcag
     1381 agtaggggct ggacggcgcg tagggcgcgg tttcggtaaa caaatcgtcc gtgccgccta
     1441 aatcgccata gacttcatcg gtggaaatat ggtggaaacg gaaggcttcg tgctgttcag
     1501 acggcatttg ttgccagtag gcgcgggctg cttcaagcag attgaatgtg ccgacgatat
     1561 tggtttggat aaactcgcct gccgaatcga tagagcggtc gacatggctt tccgctgcca
     1621 agtgcatcac cgcatcaggc tggtgttcgg caaacacacg
//
LOCUS       DAWKJW010000229         1566 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.229, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000229 DAWKJW010000000
VERSION     DAWKJW010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1566)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1566)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.229"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..967
                     /locus_tag="WJJ54_001899"
     CDS             <1..967
                     /locus_tag="WJJ54_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ7342710.1"
                     /translation="AKVAKVAKVAKVAKVAKVAKVAKVAATAQKEAAPAQQQGGIRFS
                     DGIAAVADNEVITRRRLAEAVAEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGK
                     RRNIQASEAEIDAVVAKNPALKNLSPAQRRDFADNIIAEKVRQQAVMQNSRVSEAEID
                     AFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIYGEARSGTDFS
                     SLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQFGWHIIKLN
                     EVREAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDIR"
     gene            complement(1201..>1566)
                     /locus_tag="WJJ54_001900"
     CDS             complement(1201..>1566)
                     /locus_tag="WJJ54_001900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342711.1"
                     /translation="YKLAEQYADIVASRLNISKEEALGRIIRHMQRTVDYATAKADNF
                     RTDDAIISILGANNLPKQDQHYTNPNYNKQYIQNYVRDFNLANKYNYFMPSVFTFIPI
                     CGASFPTASCQKIPLFSNT"
BASE COUNT          433 a          415 c          381 g          337 t
ORIGIN      
        1 tgccaaagtt gccaaagttg ccaaagttgc caaagttgcc aaagttgcca aagttgccaa
       61 agttgccaaa gttgccgcca cggcgcaaaa agaagccgca cccgcacaac agcagggcgg
      121 tatccgcttt tcagacggca ttgccgccgt tgccgacaac gaagtcatca cgcgccgccg
      181 gcttgccgaa gccgttgccg aagccaaagc caacctgccc aaagacgcgc agataagcga
      241 atccgagctg tcccgacagg tgctgatgca gcttgtcaac caatccctga ttgtacaggc
      301 gggcaaacgc cgcaacattc aagcaagcga agcggaaatc gatgccgtcg tcgcaaaaaa
      361 tcccgccctc aaaaacctca gccccgccca acgccgcgat tttgccgaca acatcattgc
      421 cgaaaaagtc cgccagcagg cagtgatgca gaacagccgc gtgagcgaag ctgaaatcga
      481 tgccttcctc gagcaggcgc aaaaacaagg catcaccctg cccgaaggcg caccgttgcg
      541 ccaataccgc gcccaacaca tcctgattaa agccgacagc gaaaacgccg ccgtcggcgc
      601 ggaaagcacc atccgcaaaa tctacggaga ggcccgcagc ggcacagact tttccagcct
      661 agcgcgccaa tattcgcaag acgcgagcgc gggcaacggc ggagatttgg gctggtttgc
      721 cgacggcgtg atggttcccg cctttgaaga agccgtccac gcgctcaaac ccggacaggt
      781 cggcgcgccc gtccgcaccc aattcggctg gcatatcatc aaattgaacg aagtgcgcga
      841 ggccggcaca cctcaggaac gtatccgcaa ttccgtgcgg caatacatct tccaacaaaa
      901 agccgaacag gcaaccgtca acctgttgcg tgacctgcat tccggtgcct acgtggacat
      961 ccgctgaaac ggtcgtgact gaaaagccgt gccgtcccga caaccttcgg gcggcacggc
     1021 tttttcaaac tgcggcggca gacaggcgga cgaagcggtg gaacatattg aaaaaaataa
     1081 acaaacgccg taaaagtttt ccggtggacg gcgaaaagct cgttttctag ctgctcttta
     1141 agttaatatt ccgttaaaca atgtttttga ttgttaagaa aaatttaacc tttttaactt
     1201 ttaagtattt gaaaataatg gaattttttg acaggatgca gttggaaaac ttgccccgca
     1261 aatcgggata aaagtaaaaa cggacggcat aaaataattg tatttattgg ctaaattgaa
     1321 atcacgaaca taattttgaa tgtattgttt gttgtagttc ggattagtgt aatgttgatc
     1381 ttgcttgggt aaattgtttg ctcctaaaat tgaaataatg gcgtcatcag tacggaaatt
     1441 atccgcttta gccgttgcgt aatctacggt tcgttgcata tgccgaataa ttcgcccaag
     1501 tgcttcttct tttgaaatgt ttagacgaga agctactatg tctgcatatt gttctgctaa
     1561 tttata
//
LOCUS       DAWKJW010000230         1552 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.230, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000230 DAWKJW010000000
VERSION     DAWKJW010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.230"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(3..926)
                     /locus_tag="WJJ54_001901"
     CDS             complement(3..926)
                     /locus_tag="WJJ54_001901"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEZ7342712.1"
                     /translation="MLQRTLAKSISVTGVGLHSGERVALTLHPAPENSGISFRRTDLD
                     GEMGEQIKLTPYLINDTRLSSTIVTDKGVRVGTIEHIMSALSAYGIDNALIELNAPEI
                     PIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTI
                     EFDHPVFNRSSPTFEIDFAGKSYIDEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIV
                     IDDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAINNALLRAV
                     LADETAYDRVEFADSDDLPDAFHELNIRTCG"
BASE COUNT          398 a          387 c          399 g          368 t
ORIGIN      
        1 cgttatccac aagttctgat gttcagctcg tgaaatgcgt cgggcaaatc atcgctgtcg
       61 gcaaattcca cccggtcgta agccgtttcg tctgccaaaa ccgcgcgcaa gagtgcgttg
      121 ttgatggcgt gtcccgattt gtagccttca aacgcgccga caatcggatg tccgacgata
      181 tacaaatcac cgatggcatc aaggattttg tggcgcacaa actcatcggg atagcgcaag
      241 ccttcaggat tcaggacatc cgtgtcgtca atcacgatgg cgttgttcaa attgccgccc
      301 aaacccagat tgtgggcgcg catcatttcc acttcgtgca taaagccgaa agtgcgcgcg
      361 cgcgcgattt cgtcgatgta ggatttgccg gcgaaatcaa tttcaaaagt gggcgagctg
      421 cggttgaaaa ccggatggtc gaattcgatg gtcagcgtta ccttaaagcc gtcatacggc
      481 gtaaagcgca cccatttgcc cgcttctttg atttcgacag gcttgaggat tttcaaaaaa
      541 cgcttttgcg ccttttgatc gaccacgccc gcatcttgca aaaggtaaat aaacggcagg
      601 ctggagccgt ccataatcgg gatttcgggc gcgttcagct caatcagcgc gttgtcgata
      661 ccgtaggcgg acagcgcgga cataatgtgt tcgattgtgc cgacgcgcac gcctttgtcg
      721 gtaacgatgg tggaggaaag gcgggtatcg ttgatcaaat aaggggtcag tttgatttgt
      781 tcgcccatct cgccgtccaa atcggtgcgt cggaaggaaa tcccgctgtt ttcaggcgcg
      841 gggtgcaggg tcagcgcgac gcgttcgcct gaatgcaacc cgactccggt aacgctgatg
      901 gatttcgcca aagttctttg cagcataaac cgctccctta tcaatggggt aagttttgga
      961 ataatacgat aaaaccggaa aaacaagcta tgtttttcca tagtatttgc caatgtatcc
     1021 gttttcaata cgtaagccgc ataaaaatgt atagtggatt aacaaaaatc aagacaaggc
     1081 gacgaacccg cctccctccc gaaaaacgca aaaaatgccg tccgaaaacc tttcggacgg
     1141 cattttcgcg tgaaccgtca ttctcacaag gacataaaac caaaacagga aaccaaaaac
     1201 agcaacctaa aattcgtcat tcccgcgcag gcgggaatcc agtccgcttg ttcggtaaat
     1261 gagagggcgg attgcgcgcc tgtcagataa accccgtgtt taaacgggcg gcaatgaggt
     1321 acgcgcagag ccttgaagcg cgatcgatat attatttcca ccaaaacgga cgcccccgcc
     1381 tgccttgcaa acctttaaaa ggaagccacc cggattaatc cgagtggccg tggaaaatca
     1441 cttaccgctt gatttattta aaatttatgg tataatttac cttagctggc agatgaagca
     1501 tcgcggcagg ttgacggcag gtgcttggtg tcgattttgt tggtgccgtt gg
//
LOCUS       DAWKJW010000231         1491 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.231, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000231 DAWKJW010000000
VERSION     DAWKJW010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1491)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1491)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1491
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.231"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(126..1121)
                     /gene="porB"
                     /locus_tag="WJJ54_001902"
     CDS             complement(126..1121)
                     /gene="porB"
                     /locus_tag="WJJ54_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric porin PorB"
                     /protein_id="HEZ7342713.1"
                     /translation="MKKSLIALTLAALPVAAMADVTLYGTIKAGVETSRSLDYQDGQV
                     YSVETGTGIVDLGSKIGFKGQEDLGNGLKAIWQVEQKASIAGTDSGWGNRQSFIGLKG
                     GFGKLRVGRLNSVLKDTGDINPWDSKSDYLGVNKIAEPEARLISVRYDSPEFAGLSGS
                     VQYALNDNAGKYNSESYHAGFNYKNGGFFVQYGGAYKRHVRVDENVNIEKYQIHRLVS
                     GYDNDALHASVAVQQQDAKLVGDNYSHNSQTEVAATLAYRFGNVTPRVSYAHGFKGSF
                     DDADLSNDYDQVVVGAEYDFSKRTSALVSAGWLQEGKGENKFVSTAGGVGLRHKF"
BASE COUNT          378 a          338 c          378 g          397 t
ORIGIN      
        1 aaaacagcca aacagaaaac agcgaaacag aaaaaagcca aacagaaaaa agccaaacag
       61 aaaaaagcca aacagaaaaa agcctgtctg gcgacaggct ttttgttgat accaatcttt
      121 gcagattaga atttgtggcg cagaccgaca ccgccggcag tcgatacgaa tttgttttcg
      181 cctttacctt cttgcaacca accggcagaa accaaggcag aagtgcgttt ggagaagtcg
      241 tattccgcac cgacaaccac ttggtcgtaa tcgttgctta agtctgcatc atcaaacgag
      301 cctttgaagc cgtgggcgta agaaacgcgg ggcgttacgt tgccgaagcg gtatgccaag
      361 gtagcggcaa cttcggtttg agagttgtgc gaataattgt ctccaaccaa tttggcatct
      421 tgttgctgta cggctacgga agcgtgcagg gcatcattgt cgtaaccgct gaccaaacgg
      481 tgaatctggt atttctcaat attcacgttc tcatccaccc gcacatgtct tttataggca
      541 ccgccatatt gcacgaagaa gccgccgttt ttgtagttga agccggcgtg gtaagattcg
      601 ctgttatatt tgcctgcatt gtcgttaagc gcgtattgta cgctgccgct gaggccggca
      661 aattcgggag aatcgtagcg tacggaaatg aggcgtgctt cgggttcggc aattttgttt
      721 acacccaaat agtcgctttt gctatcccaa ggattgatgt cgccggtgtc tttcaggacg
      781 ctgttcaaac ggccgacgcg caatttaccg aagccgcctt tcaagccgat gaaggattgg
      841 cggttgcccc aaccggagtc agtaccggcg atagatgctt tttgctcaac ctgccaaatg
      901 gctttcaggc cgttaccgag gtcttcttgg cctttgaagc cgattttcga acccaaatca
      961 acgatgccgg taccggtttc aacgctataa acttgaccgt cctggtaatc tagggagcgg
     1021 gaagtttcta cgccggcttt gatggtgccg tacagggtaa cgtcagccat tgctgcaaca
     1081 ggaagggctg ccaaagtcag ggcaatcagg gattttttca ttgctgtatt ccttttttgg
     1141 ttaagaaatt taagcaggcc gggctttcca agccgcttag ctttgcattt accgccgacg
     1201 ttttcggcga ttccatgtct gaaactatag atgttcctgt ctgaaaaaac aaacttctgc
     1261 ctgtttttgt gtggaattcg atgtgtattt tgaagggcgg atagagatat tgtgggtatt
     1321 ttttgtttta taacatatgg ttatttaaat tttttaagat ttgcattttt acaacactta
     1381 ctcgggaggg tattggaggg cattgcaaac cgagggttat aaagacggca aaaaacgcgc
     1441 acgtggtttc tttcggaacg ggcggatgca aaacccgccc ctgcggcagg a
//
LOCUS       DAWKJW010000232         1472 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.232, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000232 DAWKJW010000000
VERSION     DAWKJW010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1472)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1472)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.232"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            58..231
                     /locus_tag="WJJ54_001903"
     CDS             58..231
                     /locus_tag="WJJ54_001903"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342714.1"
                     /translation="MIKQVANNLPDGSPAKAAVFKAEREGKLKTAIAGVDRQTGKAVI
                     LPVKVPSKANIRR"
     gene            234..1172
                     /locus_tag="WJJ54_001904"
     CDS             234..1172
                     /locus_tag="WJJ54_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 49 family protein"
                     /protein_id="HEZ7342715.1"
                     /translation="MGYNMMTTQKWYEHITDVIIGTTQRFNTEKSTDSIEYINERKGS
                     PIGAICIVSIDVYAACSHAYLFEHSLKKFKQYAYAYSKLEILASMGWSDPTPFFFPCD
                     MLNIQDPMFLMLMSDSPQLREFLVRNIDNIANDTEAFINRYDLNRHMIYNTLLMVEGK
                     QLDRLKQRSEKVLVHPTPSKWLQKRLYDYRFFLAFAEQDAEAMKAALEPLFDKKTARM
                     AAKETLSYFDFYLQPQIVTYAKIASMHGFDLGIDHEIAPRDLIVYDPLSAAEYQDIFD
                     FMKQYDLSYPYEYLQDWIDYYTFKTDKLVFGNAKRE"
BASE COUNT          436 a          331 c          314 g          391 t
ORIGIN      
        1 taaaaatagg tttccgcctt caatgttttg gccatttgga tgtgtcggta gaattctttg
       61 attaaacaag ttgcaaataa cttacctgat ggtagtcctg ctaaagctgc tgtcttcaaa
      121 gcggagcggg aaggcaaatt aaaaacggca atagcaggcg ttgatcgtca aacaggtaag
      181 gccgttattc ttcctgttaa agttccttct aaagccaata taaggagata acaatgggat
      241 acaatatgat gaccacccaa aaatggtatg agcatattac agatgtaatt ataggcacca
      301 ctcaaagatt taatacagag aaaagtactg atagtataga gtatattaat gaaagaaaag
      361 gatctccaat tggagcaatc tgtatcgttt ctatagatgt ttatgcggca tgctcacatg
      421 cttatctgtt tgaacacagc cttaaaaagt tcaaacagta tgcttatgct tacagtaaac
      481 ttgagatact ggcaagtatg ggatggtctg accccacgcc tttcttcttt ccctgcgaca
      541 tgctcaacat tcaagatccg atgtttctga tgctgatgag cgacagcccg cagctgcgtg
      601 agtttctggt gcgcaatatc gacaacatcg ccaacgatac agaagccttt ataaaccgct
      661 acgacctcaa ccggcatatg atttacaata ctctgctgat ggtggagggt aagcagcttg
      721 atcggttgaa acaacgtagc gagaaagtct tggtgcaccc cacccctagc aaatggctgc
      781 aaaagcggtt gtacgattac cgcttcttcc tcgctttcgc cgaacaggat gccgaggcga
      841 tgaaagccgc cttagagccg cttttcgata aaaaaaccgc gcgtatggct gccaaagaaa
      901 cattgtccta tttcgatttc tacctgcagc cgcaaatcgt tacctacgcc aaaatcgcat
      961 ccatgcacgg tttcgatttg ggcatagacc acgaaatcgc accgagggat ttgattgttt
     1021 acgatccgct gtcggcagcc gaatatcaag acatcttcga ttttatgaaa cagtatgact
     1081 tgtcttaccc gtatgaatat ctgcaggatt ggatagatta ctatacgttc aaaaccgata
     1141 agctggtatt tggtaacgcg aagcgagagt gagccgtaaa actctgagct cctgttttat
     1201 agattacaac tttaggccgt cttaaagctg aaagattttc gaaagctata aattgaagcc
     1261 cttccacagt acatagatct gtgttgtggc ggggctttac cacgctgatt gtcggagaag
     1321 aactcaacct gctggcaaaa caaggcatga gatctttgca ataacatgag ttgagacctt
     1381 tgcaaaaaag cccttccccg acatccgaaa cccaaacaca ggttttcggc tgtttttgcc
     1441 ccataacacc tcctaattct acccaaacac cc
//
LOCUS       DAWKJW010000233         1441 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.233, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000233 DAWKJW010000000
VERSION     DAWKJW010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.233"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            27..1364
                     /locus_tag="WJJ54_001905"
     CDS             27..1364
                     /locus_tag="WJJ54_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ7342716.1"
                     /translation="MSNHTSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFL
                     LFLIFTVLVALPVQLAEFYIGRTGGKNAVDSFRALRPGTQWLWVGRMGVTACFVLLSF
                     YSVVGGWVLNYVVHSFTGAIHAGADFEALFGTTISNPAGSLSYQALFMLITVWVVKGG
                     ISDGIEKANRYLMPGLFILFIALAIRSLTLPGAMEGVSFLLKPNWSYFKADTMITALG
                     QAFFALSIGVSAMITYASYLGKDQDMFRSGHTIMWMNLLVSLLAGLVIFPAVFAFGFE
                     PSQGPGLIFIVLPAVFMKMPFGTVLFAVFMLLVVFATLTSAFSMLETVIAATIRQDER
                     KRKKHTWLIGTAIFIVGIPSALSFGVWGEFKVFGKTIFDLWDYLISAVIMPVGALSVA
                     VFTAWIQDRQSVLKDAGAGSTVPRAVLLLWLNTLRYLAPIAIIIVFINSLDIL"
BASE COUNT          264 a          338 c          390 g          449 t
ORIGIN      
        1 tatcttcaca tttcttaata aattttatga gtaaccatac ttcttggtcg tccaaaatcg
       61 gtttcgtgct tgctgcggca ggttcggcca tcggtttggg cgcgatttgg aaatttcctt
      121 atacggcagg caccaacggc ggcgcggtgt ttttcctgct gtttttgata tttaccgtct
      181 tggtcgccct gcccgtccag cttgccgagt tttatatcgg gcgcacaggc ggtaaaaatg
      241 ccgtcgattc cttcagggct ctgcgtccgg gtacgcaatg gctttgggtc gggcgcatgg
      301 gcgttaccgc ctgctttgtt ttgctgtcgt tttacagcgt ggtcggcgga tgggtattga
      361 attatgtcgt ccacagtttt acgggggcaa tccatgcggg agcggacttt gaagccctgt
      421 tcggcacaac gatttccaat ccggcaggtt cgctgtccta tcaggcactg tttatgctga
      481 ttacggtttg ggtggtcaaa ggcgggattt cagacggcat tgaaaaggca aaccgttatc
      541 tgatgccggg gctgtttatc ctctttattg cgctggcaat ccgttcgctg acgctgccgg
      601 gtgcaatgga gggcgtgtct ttcctgctca aaccgaattg gtcgtacttt aaagccgata
      661 cgatgattac ggctttggga caggcgtttt ttgccttgag catcggcgtt tccgctatga
      721 ttacctatgc ttcgtatttg ggaaaagatc aggatatgtt ccgctcgggg catacgatta
      781 tgtggatgaa cctcttggtt tcgctgttgg caggtttggt gatttttccg gcggtgttcg
      841 ccttcggttt tgaaccgagc caggggccgg gattgatttt tatcgtattg cccgcagtgt
      901 ttatgaagat gccgttcggt acggttttgt ttgcggtatt tatgctgctg gtcgttttcg
      961 ccacgctgac ttcggcattt tcgatgttgg aaacggtcat tgccgcaacc atccgccaag
     1021 acgagcgcaa acgcaaaaaa catacttggc ttatcggcac ggctattttc attgtcggca
     1081 tcccatccgc gctgtctttc ggcgtatggg gtgagtttaa ggttttcggc aaaaccattt
     1141 ttgatttgtg ggactacctt atttctgcag tcatcatgcc tgtcggcgca ttgagcgttg
     1201 ccgtatttac cgcttggatt caggacaggc agtctgtgtt aaaagatgcc ggcgcgggca
     1261 gcaccgtacc acgggcagtg ttgctgctgt ggctgaatac cttgcgctac ctcgccccga
     1321 ttgccattat tattgttttc atcaattctt tggacatcct ttaaaagcca tccaaacagc
     1381 aaaaatgccg tctgaaagcc tttcagacgg catttttgct tcaggttcag cctatttcgt
     1441 t
//
LOCUS       DAWKJW010000234         1425 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.234, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000234 DAWKJW010000000
VERSION     DAWKJW010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1425)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1425)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1425
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.234"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..372
                     /locus_tag="WJJ54_001906"
     CDS             <1..372
                     /locus_tag="WJJ54_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HEZ7342717.1"
                     /translation="RLRRLVLIFVNPLYIIATTVPAQQAFLDAAELMQWSIETEGLGL
                     NVISHKILGKDHAQVEFEAYFRDGQHRSAHHELSGFVNIGGQWYFIDPTVPHPAMKQP
                     CICGSGKKFKACCGKYLKPVA"
     gene            complement(591..1385)
                     /locus_tag="WJJ54_001907"
     CDS             complement(591..1385)
                     /locus_tag="WJJ54_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEZ7342718.1"
                     /translation="MLHRLQKVVRHIAQTEIMPRFLNTPSHRKEDGSMLSEADIAAQT
                     AFAAALPLLIDCPMLGEEMSRQEQSALWEQYSGEKGLWIVDPIDGTNNFVNGLPHFAV
                     SVAFVRNGRAELGVIYNPVSGECFYAERGQGAFLNGTRLPLRLVDKKLNEAIAGVEIK
                     YLRSGKLSSRMSTLAPFGTIRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGALIF
                     EEAGGRLTTLEGDGFWSGEHVFKRSVVAALEPKLFERWVGWIRENQ"
BASE COUNT          380 a          435 c          308 g          302 t
ORIGIN      
        1 cggcttcgtc gccttgtcct gatttttgtt aatccactat acatcatcgc tactaccgtt
       61 ccggcgcaac aggcattcct cgatgccgcc gaactgatgc aatggagtat agaaaccgaa
      121 gggctgggct tgaacgtcat ctcgcacaag atactcggca aagaccacgc ccaagtcgaa
      181 tttgaagcct acttccgaga cggacaacac cgatccgcgc atcacgaact gtccggcttc
      241 gtcaacatcg gcggacaatg gtattttatc gatcccaccg ttccgcatcc tgcgatgaaa
      301 caaccctgca tttgcggatc aggcaaaaaa ttcaaagcct gctgcggcaa atatctgaaa
      361 cctgtcgcat aaaaatgccg tctgaacgtt cagacggcat tttcaacgtg caaaaaaaaa
      421 ccattcatac caagggtaag tatgaatggt caatacattg cgggaaaacg tcttacttgc
      481 tgcactgccg aaaagggaga aacggcagcg gtaatcagcg gaaatgattg tacccgaatt
      541 aatgttaaga aacgttaatc gcgaaaatat attaacaaac ctgttgaaac ctattggttt
      601 tcccgtatcc acccgaccca gcgttcaaac agcttcggtt cgagcgcggc aacgaccgag
      661 cgtttgaaca cgtgttcacc actccaaaac ccgtcgcctt ccaaagtcgt cagcctgccg
      721 cccgcctcct cgaaaatcaa cgcacccgca gcatagtccc acagcttctg cccaccgtga
      781 acataaacat cataacgccc gcacgccaga taacaccaat ccaacgtact gctgcccata
      841 ctgcgtatcg tcccgaaagg cgcgagcgta ctcatgcggc tggacagttt gcccgaacgc
      901 agatatttga tttccacacc cgcgattgcc tcattcaact tcttatccac gaggcgcaaa
      961 ggcaggcgtg tcccattaag aaacgcaccc tgcccccgtt cggcataaaa acattcgccg
     1021 ctgaccggat tgtagattac gcccaattcg gcgcgcccgt tgcggacaaa cgccaccgac
     1081 acggcaaaat gcggcagccc gttgacaaaa ttgttcgtcc cgtcaatcgg atcgacaatc
     1141 cacagcccct tttcccccga atattgttcc cacaaagccg actgttcctg ccgcgacatt
     1201 tcctcgccca acatcgggca atcgatcaga agcggcaacg cggcagcaaa agccgtctgc
     1261 gcggcaatgt ccgcctcgct caacatcgaa ccatcttcct tgcggtgaga cggcgtattc
     1321 aaaaaacgcg gcataatttc ggtttgcgcg atatggcgca cgactttctg caaacggtgt
     1381 aacacttcct actgtcctca tattttgaac ttgcggcacg cgaac
//
LOCUS       DAWKJW010000235         1416 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.235, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000235 DAWKJW010000000
VERSION     DAWKJW010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1416)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1416)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.235"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            188..1372
                     /gene="ubiM"
                     /locus_tag="WJJ54_001908"
     CDS             188..1372
                     /gene="ubiM"
                     /locus_tag="WJJ54_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HEZ7342719.1"
                     /translation="MSLHSDILVVGAGPAGLSFAAELAGSGLKVTLIERSPLTVLQNP
                     PYDGREIALTHFSREIMQRLGMWDKIPENEIYPLRDAKVLNGRSDYQLHFPQPTEARG
                     EPADCLGYLISNHNIRRAAYEVVSQLDNITILTDTVVKEVKTSDNEAQVILENGKILT
                     ARLLLAADSRFSQTRRQLGISSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIAL
                     LPLEEHLTNTVITVDTDKINSVQNLSPEELAASVKEQLKARLGDMELVSSIHHYPLVG
                     MIAKRFYGKRSALIGDAAVGMHPVTAHGFNLGLSSADILAKLILEAEQRGQDIGAASL
                     LEKYSSKHMLHAHPLYHGTNMMLKLFTNETAPAKLLRGLVLRAGNNFPPLKKLITKQL
                     TG"
BASE COUNT          378 a          413 c          307 g          318 t
ORIGIN      
        1 ataccccaca cccgatttga tacacattaa gctgaaagta aaaatccgca tacaccctcc
       61 cctgcatatt tcttcaacag tgggttttga tataatcgcc tatctgttac agatagttca
      121 aacggcattc aaacccttac aaataccgtc tgaaatcatc ggcatccgtc tatgcaaagg
      181 atattttatg agtttacaca gcgacatcct cgtcgtcggc gcaggtccgg cgggtttaag
      241 ttttgcagcc gaacttgccg gcagcggttt gaaagttacc ctgatcgaac gcagcccact
      301 gactgttctg caaaatcctc catatgacgg acgcgaaatc gccctgaccc atttttcccg
      361 cgaaatcatg cagcgtctgg gtatgtggga caaaattccc gaaaatgaaa tttacccttt
      421 gcgcgatgcc aaagtgctga acggacgttc cgactaccag ctccactttc cccaaccgac
      481 cgaggcgcgc ggcgaacctg ccgactgttt gggctatctt atttccaacc acaatatccg
      541 acgcgctgcc tacgaagtcg tatcccaact cgacaacatt accattctga ccgatacggt
      601 tgtcaaagaa gtcaaaacat ctgacaacga agcacaagtc attttggaaa acggcaaaat
      661 cctgactgca cgcctgcttt tggcggcaga cagccgcttc tcgcaaaccc gtcgacaact
      721 cggtatctcc tccgatatgc acgattacag ccgaaccatg ttcgtctgcc gtatgaaaca
      781 taccctttcc aaccaacata ccgcttacga atgcttccat tacggacgca ccatcgcact
      841 gctgccgctg gaagagcacc tgaccaatac cgtcattacc gtcgataccg ataaaatcaa
      901 cagcgttcaa aacctttcgc ccgaagaatt ggcggcaagc gtaaaagaac agctcaaggc
      961 caggctcggc gatatggaac tggtcagcag catccaccat tacccccttg tcggtatgat
     1021 tgccaaacgt ttctacggca aacgcagcgc gctgatcggc gatgcggctg tcggtatgca
     1081 ccccgttacc gcacacggtt tcaacttggg tctgtccagc gcagatattt tggcaaaact
     1141 gatactcgaa gccgagcagc gcggtcagga catcggcgcg gcttccttgt tggaaaaata
     1201 cagcagcaaa catatgctgc acgcccatcc gctttatcac gggaccaata tgatgctgaa
     1261 gctgtttacc aacgaaaccg caccggcaaa actgctgcgc ggcttggtat tgcgtgccgg
     1321 caacaatttc ccgccgctga aaaagctgat taccaaacaa ctgaccggtt gaaaactgcc
     1381 gaaatgccgt ctgaaacgtt tcagacggca tttttg
//
LOCUS       DAWKJW010000236         1412 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.236, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000236 DAWKJW010000000
VERSION     DAWKJW010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1412)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1412)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1412
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.236"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(34..492)
                     /locus_tag="WJJ54_001909"
     CDS             complement(34..492)
                     /locus_tag="WJJ54_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342720.1"
                     /translation="MLTKLKILLFLFLFVFVLAINLLFFFFSSDIESFGNYQFEYVYD
                     KGWPANYILVMKDGNEGNFDKIISGLVLEYYKEDDNIYFSYIDGQGFASDSCYYKPEI
                     LYGKIILNKNHIININSMEKNNFLSEDKIMKGTRNWLADPKNKCNIQTLD"
     gene            complement(1057..1407)
                     /locus_tag="WJJ54_001910"
     CDS             complement(1057..1407)
                     /locus_tag="WJJ54_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342721.1"
                     /translation="MALRTHFVISNVPSTPNLLRGRQLEGKLILEVPAQVNPIPQSVL
                     RAAQEENVIIRDTTGRIYNRWWFSIRWLCRCTSCKKRTIDTNRENRGRCVSNCKCKHW
                     ISMDCQFVRAKRRS"
BASE COUNT          489 a          261 c          165 g          497 t
ORIGIN      
        1 caatcgattc cgttgtattt tcgcaagaca cgtttagtct agagtctgta tattacattt
       61 atttttaggg tctgctagcc aatttcttgt tcccttcatt attttatctt ctgaaagaaa
      121 attatttttt tccatgctat taatattaat gatatgattt ttatttaaaa taatttttcc
      181 atataaaatt tccggtttgt aatagcaaga gtctgaagca aatccttgcc cgtcaatata
      241 agaaaaataa atgttatcat cctccttata atattctaaa accaatccgg atattatttt
      301 atcaaaattc ccttcatttc catctttcat gactaaaata taattagcag gccaaccttt
      361 atcgtaaaca tattcaaact gatagttccc gaaactctcg atatccgaac taaaaaagaa
      421 gaaaagcaaa ttaatagcca atacaaaaac aaataagaac aaaaatagca aaattttcaa
      481 cttagttaac aatatttacc tctcctttaa attcaatcct gaaaggtacc ccttaccctg
      541 ggctaccaat tatagtttcc atatttctaa atattgtttt tacattactt ttttctcccc
      601 ccaaaggaat gcattttaaa atcatgcttt tcaggtgcta atcgatactt accattaaca
      661 tctttaatca cagatatatt tccatgtata gcccaacgtg aaaaatctga gtattatata
      721 cagttatacc ttactgaaac aaagctagct gtacatatct gtaccatatt tttactacaa
      781 acaaaaaata tttataatta ttaaggataa gataaaaacc cccaacgcca gattaattct
      841 taataatttc aaataaaaaa tatttgagat tttttctttt ccaaataata tattgaaata
      901 tttaaagtta aggtagcttg atttaattag aaaatcaaaa aaaaccatta atttttcttc
      961 tttaaatatt ttatatgata ttataaaatt aaataacatt gcgaaaacat atgaaatcat
     1021 caaaatacca aatatatagt gagaatgcat tattatttag ctccttcttt tggctctgac
     1081 aaattgacag tccattgata tccaatgctt gcatttgcaa ttgctgacgc acctgcccct
     1141 gttttccctg ttagtatcaa tggttctttt cttgcaagat gtgcacctgc acaaccacct
     1201 aatactaaac caccacctat tgtaaatcct tcctgttgta tctctaatga taacattttc
     1261 ttcttgtgcc gcccttaata cagattgtgg aattggattg acctgagcag gaacttctaa
     1321 aataagtttt ccttcaagct gtcttcctct tagcagatta ggtgtacttg gaacattgga
     1381 aatgacaaag tgagtgcgca aagccatctg aa
//
LOCUS       DAWKJW010000237         1407 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.237, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000237 DAWKJW010000000
VERSION     DAWKJW010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1407
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.237"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            110..559
                     /locus_tag="WJJ54_001911"
     CDS             110..559
                     /locus_tag="WJJ54_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HEZ7342722.1"
                     /translation="MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRA
                     ALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAV
                     AIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLFK"
     gene            complement(649..804)
                     /locus_tag="WJJ54_001912"
     CDS             complement(649..804)
                     /locus_tag="WJJ54_001912"
                     /inference="COORDINATES: protein motif:HMM:NF017953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase"
                     /protein_id="HEZ7342723.1"
                     /translation="MSEGKTKPSPKKGVVFPFIKKLLSINEINPNDPTIGFILLSRNN
                     PDTDYES"
     gene            1256..>1407
                     /locus_tag="WJJ54_001913"
     CDS             1256..>1407
                     /locus_tag="WJJ54_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HEZ7342724.1"
                     /translation="MSTFFQQTAQAMIAKHINRFPLLKLDRVIDWQPIEQYLNRQKTR
                     YLRDHRG"
BASE COUNT          421 a          239 c          301 g          446 t
ORIGIN      
        1 tataccggcc gctaaaaaat agagtgggaa atatgcatac tgttgaatgg gatagtaagt
       61 ctgttcaaag aaatatgttg aataatctgt tcttattgga agtaaagtaa tgactgataa
      121 tcgggggttt acgctggttg aattaatatc agtggtcttg atattgtctg tacttgcttt
      181 aattgtttat ccgagctatc gcaattatgt tgagaaagca aagataaatg cagtgcgggc
      241 agccttgtta gaaaatgcac attttatgga aaagttttat ctgcagaatg ggaggtttaa
      301 acaaacatct accaaatggc caagtttgcc gattaaagag gcagaaggct tttgtatccg
      361 tttgaatgga atcgcgcgcg gggctttaga cagtaaattc atgttgaagg cggtagccat
      421 agataaagat aaaaatcctt ttattattaa gatgaatgaa aatctagtaa cctttatttg
      481 caagaagtcc gccagttcgt gtagtgacgg gctggattat tttaaaggaa atgataagga
      541 ctgcaagtta tttaagtagg cttgtttaca aatcgatcga tagtgtttca gtatttgtgc
      601 ggttttccgc cttgatggaa tgaaaatcgt gtaatattaa gcctatagtt atgactcgta
      661 atctgtatct ggattgtttc tggataaaag aataaaccca atcgttgggt cgtttgggtt
      721 tatttcattg attgacagaa gttttttaat aaatggaaag acaacgcctt ttttagggga
      781 tggttttgtt tttccctctg atattgccta taggtttctg ccccttccat tctaaatata
      841 ttatccgatt cggataagtc gaatagggca cttgatgcta agccgattac aagtcgtttc
      901 gataaatcat aggacataat aaggatatct ttagccgtgg atttatgggg catagtagca
      961 aaaattgtat aagggtgtac attactcatc tgaaaaggtg aacagatttt ataatgccgt
     1021 ctgaagatgt tttcagacgg cattttgttt ccaattcgtt ataggcttgt attttgccta
     1081 tgcaatatat agtggattaa atttaaacca gtacagcgtt gcctcgcctt gtcctgattt
     1141 aaatttaatc cactatggta atttaaggca tgtttgcacc tttagacata aggagacctt
     1201 tgcaaaattc cccaaaatcc cctaaattcc caccaagaca tttaggagat ttctcatgag
     1261 caccttcttc cagcaaaccg cccaagccat gattgccaaa cacatcaacc gcttcccgct
     1321 attgaagttg gaccgggtaa ttgattggca gccgatcgag cagtacctga accgtcaaaa
     1381 aacccgttac cttagagacc accgcgg
//
LOCUS       DAWKJW010000238         1333 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.238, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000238 DAWKJW010000000
VERSION     DAWKJW010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1333)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.238"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            40..372
                     /locus_tag="WJJ54_001914"
     CDS             40..372
                     /locus_tag="WJJ54_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general secretion pathway protein GspG"
                     /protein_id="HEZ7342725.1"
                     /translation="MQILSFQPDIAERMLEGTEGESVNENAQFVRTDNGYWIAWHEGV
                     AALLAPDMPPGIPCFWVEGAESLEELCVMVERGEFDEVEEFDGDDDEWLETAQGCGHH
                     GDACACGH"
     gene            704..1213
                     /locus_tag="WJJ54_001915"
     CDS             704..1213
                     /locus_tag="WJJ54_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003662333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HEZ7342726.1"
                     /translation="MTMILSILSLFFIIRLLFLAVSIKHEKALIAKGAKQYGKTNSTL
                     LAAVHTLYYLACFVWVWLSDTAFNGISLIGTLTVMASFVILSLIIKQLGEIWTVKIYI
                     LPNHQINRSWLFKTFRHPNYFLNIIPELIGIALLCQAWYVLLIGLPIYLLVLFKRIRQ
                     EEQAMATLF"
BASE COUNT          354 a          257 c          314 g          408 t
ORIGIN      
        1 ccttgttttg acggaaaacc atcatataaa ggaacactta tgcagatttt atcttttcaa
       61 ccggacattg cggaacgtat gctggaaggt acggaaggcg agtcggtcaa cgaaaacgca
      121 caattcgtcc gtacggacaa cggctattgg attgcgtggc atgaaggcgt agcggcactg
      181 cttgcgcccg atatgccgcc gggcattccc tgtttttggg tggaaggcgc ggaaagcctt
      241 gaagagttgt gcgtcatggt ggaacgcggc gagtttgacg aagtggaaga gtttgacggc
      301 gatgacgacg aatggctcga aacggcacag ggttgcgggc accacggcga cgcttgcgcc
      361 tgcggacatt aaaggcattg caggcttgcc gcaagggggg caaggctttg ccgtttttta
      421 aataatcggt ggattgcatc tgtttgaaat gggctgaacg cttccctttg tattttattg
      481 aataaaaaaa cttatcttgg tattataatt aaggcagcat caattatttt gggatggcaa
      541 taaacgcaaa gcattgattt gcgccgattg cagacttatt atagcaggtt gcggcgcgga
      601 cttaatggga attgtttata gagcatgatg gtctgaaaca tcattaatta aaaataccat
      661 taatccgatt tatatttatt tcaatttcaa tggaaaaaca tcaatgacaa tgattttaag
      721 cattttaagc ctgtttttta tcatcagact gttattttta gccgtctcta ttaaacatga
      781 aaaagccttg attgccaaag gggcgaaaca atacggaaaa accaattcca cgctgcttgc
      841 ggcagttcat acgctttatt atttggcgtg ttttgtttgg gtatggcttt ctgacactgc
      901 ttttaatggc atatccttga ttggtacgct gacggtgatg gcttcgtttg tgatattgtc
      961 attgattatt aagcagttgg gggagatttg gacggttaaa atctatattt taccaaatca
     1021 tcaaattaat cgttcgtggt tgtttaaaac attccgccac cccaattatt ttttaaacat
     1081 catacccgaa ctgattggca tcgccttatt atgtcaagcg tggtatgttt tattgattgg
     1141 cctgcccatt tatttgctgg tcttatttaa gcgtatccga caagaagaac aggcgatggc
     1201 aacacttttt taacccgttt catcaattat agcggattaa caaaaaccag tacggcgttg
     1261 cctcgccttg ccgtactggt ttttgttaat ccgctatatt ccgccatctc taagatttac
     1321 agcaatacac ggg
//
LOCUS       DAWKJW010000239         1332 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.239, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000239 DAWKJW010000000
VERSION     DAWKJW010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.239"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(121..324)
                     /locus_tag="WJJ54_001916"
     CDS             complement(121..324)
                     /locus_tag="WJJ54_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein ParB"
                     /protein_id="HEZ7342727.1"
                     /translation="MNGLKADRPSANKANLSIDDVIKQEEIKRISFDMSESLHRELKK
                     YAAENGVTIRVVLNKLVSDLLNK"
     gene            complement(367..774)
                     /locus_tag="WJJ54_001917"
     CDS             complement(367..774)
                     /locus_tag="WJJ54_001917"
                     /inference="COORDINATES: protein motif:HMM:NF025001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein ParA"
                     /protein_id="HEZ7342728.1"
                     /translation="MIDGAPQTADLAISAIKASDLVLIPVQPSPYDIWATADLVNLIK
                     QRIKLIDGNLKAAFLINRTIKGTKIGGEIRAALEEYELPVLSTVIVQRIIYPTSAITG
                     STVLDKEPNGEAAKEIQSLANEIINLINIDNHI"
     gene            complement(787..1011)
                     /locus_tag="WJJ54_001918"
     CDS             complement(787..1011)
                     /locus_tag="WJJ54_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ7342729.1"
                     /translation="MKVISVLNQKGGSGKTTVATHLARALQLAGNSILLVDSDPQGSS
                     RDWAAVHEEQPVPVIGIDSPTIDRDLKSVV"
BASE COUNT          396 a          257 c          208 g          471 t
ORIGIN      
        1 ttatatgtca agttttgcaa tgaaaagacg ttctgttttt ggaagaaggt attttgttat
       61 ttttagataa agttggatat tgctttgaca ttatggtcaa atacattctg ccgtgtgtta
      121 ttatttattc aataaatctg aaacgagttt attgagcacg acgcgaatag ttacaccatt
      181 ctcagccgcg tatttcttca attctctatg cagagattca gacatatcaa aactgattct
      241 cttgatttct tcttgcttga tcacatcatc aatagataag tttgctttgt ttgcactagg
      301 acgatctgct tttaatccgt tcataattat ttcctacaat atttaaaaat ttaaaataat
      361 atttcattaa atatgattat ctatatttat caaatttatt atctcattcg caagtgattg
      421 aatttcctta gctgcttctc catttggttc tttatccagt acagtgctac ctgtgatagc
      481 agatgttgga taaataatac gttgcacaat cacggttgat aaaacaggta actcatattc
      541 ttctaacgct gctctaattt ctccgccaat ctttgttcct ttaatagttc ggttaattaa
      601 aaaagcagcc tttaaatttc catctatgag ttttatccgc tgcttgatta aattaaccaa
      661 atcagcggtt gcccaaatat cgtatggcga cggttgaaca gggattaaaa ctaaatcaga
      721 ggctttaatc gctgatatgg ctaaatcggc tgtttgtggt gcgccatcaa taataacaaa
      781 atctttttaa acaacgcttt ttaaatcacg atcaattgtc gggctgtcaa taccaatcac
      841 aggaacaggt tgctcttcgt gaacagcagc ccagtcccta ctgcttcctt gtggatcgct
      901 atcaaccaat aagatgctat ttcctgctaa ttgcaaggcg cgtgccaagt gagttgcgac
      961 tgtggtttta ccacttccac ccttttgatt taatacggaa ataactttca tgttagctcc
     1021 tttgaatatc tacgctcatt atgcttttaa ttaaataata ttttaatcta ttatttaaat
     1081 aaataaaaga atatttacat tttgttttaa attttagcaa gaaaagctgt taaagagatt
     1141 actgtatcaa actagacttt tttgagatat gtggcagaaa atgagttgat attgcgttaa
     1201 agtttaaatt gagacctttg caaaaaagcc cttcccccaa cagccgaaac ccaaacacag
     1261 gttttcgtct atttccgctc ctaattactc ctgattttac ccaaatgccc ccttaatcct
     1321 ccccggacgc cc
//
LOCUS       DAWKJW010000240         1316 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.240, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000240 DAWKJW010000000
VERSION     DAWKJW010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1316)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1316)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.240"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..>1316
                     /locus_tag="WJJ54_001919"
     CDS             <1..>1316
                     /locus_tag="WJJ54_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEZ7342730.1"
                     /translation="VAADDGLLVRDLNGNGIIDNGAELFGDNTKLADGSFAKHGYAAL
                     AELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEELGIQSLDLAYKDVNK
                     NLGNGNTLAQQGSYTKTDGTTAKMGDLLLAADNLHSRFKDKVELTAEQAKAANLAGIG
                     RLRDLREAAALSGDLANMLKAYSAAETKEAQLALLDNLIHKWAETDSNWGKKSPMRLS
                     TDWTQTANEGIALTPSQVAQLKKNALVSLSDKAKAAIDAARDRIAVLDAYTGQDSSTL
                     YYMSEEDALNIVKVTNDTYDHLAKNIYQNLLFQTRLQPYLNQISFKMENDTFTLDFSG
                     LVQAFNHVKETNPQKAFVDLAEMLAYGELRSWYEGRRLMADYVEEAKKAGKFEDYQKV
                     LGQETVALLAKTSGTQADDILQNVGFGHNKNVSLYGNDGNDTLIGGA"
BASE COUNT          393 a          305 c          307 g          311 t
ORIGIN      
        1 gttgctgccg atgacggtct gcttgtgcgc gatttgaacg gcaacggcat catcgacaac
       61 ggcgcggaac tcttcggcga caataccaaa ctggcagacg gttcttttgc caaacacggc
      121 tacgcggctt tggccgaatt ggattcaaac ggcgacaaca tcatcaacgc ggcagacgcc
      181 gcattccaaa ccctgcgtgt atggcaggat ctcaaccagg acggcatttc ccaagctaat
      241 gaattgcgta cccttgaaga attgggtatt caatctttgg atctcgccta taaagatgta
      301 aataaaaatc tcggtaacgg taacactttg gctcagcaag gcagctatac caaaacagac
      361 ggtacaaccg caaaaatggg ggatttactt ttagcagccg acaatctgca cagccgcttc
      421 aaagacaaag tggaactcac tgccgaacag gcaaaagccg ccaatcttgc gggcattggt
      481 cgtctgcgcg atttgcgcga agctgccgca ttgtccggcg atttggccaa tatgctgaaa
      541 gcttattctg ccgccgaaac taaagaagca cagttggcat tgttagataa tttgattcac
      601 aaatgggcgg aaaccgattc gaactggggc aaaaaatcgc caatgcgact ttcaaccgat
      661 tggacgcaaa cggctaatga aggtattgca ctgacaccat cccaagtagc acaactaaaa
      721 aagaacgctt tagtttccct ttctgataaa gctaaagcag ctattgacgc cgcccgcgac
      781 cgcattgccg tgcttgatgc ctacacgggg caggattcca gcacgcttta ttacatgagc
      841 gaagaagacg cgcttaatat cgtcaaagta accaacgata catacgacca tctcgccaaa
      901 aacatctacc aaaacctgtt gttccaaacc cgtttgcagc catatttgaa tcaaatcagt
      961 ttcaaaatgg aaaatgatac gttcactttg gattttagtg gtcttgttca agcatttaac
     1021 catgtcaaag aaactaatcc gcaaaaagct tttgtggatt tggccgagat gcttgcatat
     1081 ggcgaacttc gttcttggta tgaaggccga agactaatgg ccgattatgt ggaggaggca
     1141 aaaaaagcag gtaaatttga agattaccag aaagtgttgg gtcaggagac cgttgcatta
     1201 ttagctaaaa catcgggtac gcaagcagat gatatcctgc aaaatgtagg ctttggtcat
     1261 aataaaaatg tttctttata tggtaatgac ggtaacgaca ctctgatcgg cggcgc
//
LOCUS       DAWKJW010000241         1302 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.241, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000241 DAWKJW010000000
VERSION     DAWKJW010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.241"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..183
                     /locus_tag="WJJ54_001920"
     CDS             <1..183
                     /locus_tag="WJJ54_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ7342731.1"
                     /translation="EAAGIAKRQTASKYLKELSDIGVLQEIAIGRDKLFIHPRLMELL
                     RGEGNSFTSFQSLVKA"
     gene            213..1091
                     /locus_tag="WJJ54_001921"
     CDS             213..1091
                     /locus_tag="WJJ54_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ7342732.1"
                     /translation="MARRSKTFEEAAAEVEERFGHRGIKLVEFEGTAKPCVINCPKHG
                     NQTCSRYSNMFIGSSWGCPSCGNEQAAKAGIATLRKNHIALEMLKQAVTGMTKQERIT
                     TQAYNEMTKSVAGSNSIVLNDVQGDTTINNHHTHTHNHSDADGKALSMRLTPRPLLSD
                     RQAAAFARTGKLTGSFDLFASVVAPSQYTFAVAMPDTSMSPVIEKGDLLVVEPRMRPA
                     DEDIVLIELSDKRLVVAHLVIDIAGRMLIYQTGRPSEAFDLPEGSTILGVVLEVKKRF
                     MSAAQARRRVDSDYHP"
     gene            1095..>1302
                     /locus_tag="WJJ54_001922"
     CDS             1095..>1302
                     /locus_tag="WJJ54_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEZ7342733.1"
                     /translation="MDGWYDFRFQNVVYAPDRSPEISRMLSSILAGYAWDTENPFVAK
                     SEQRLTALSEWVGQLETEYSELNLN"
BASE COUNT          338 a          329 c          352 g          283 t
ORIGIN      
        1 gaagcggcag ggatagccaa acggcagacg gcctctaagt acctgaaaga gctttcagat
       61 ataggtgtgc tgcaagaaat cgccatcggc agggacaaac tattcattca tccgcgccta
      121 atggaactat tgcggggaga gggcaacagc tttacctcat tccaatccct cgttaaagca
      181 tagccaaaat aatcaataat ccggaggtca atatggcaag aaggtcaaaa acatttgaag
      241 aagctgctgc tgaggttgag gaacgtttcg gtcatcgtgg cattaagttg gtcgagtttg
      301 agggtacagc caagccgtgt gtaatcaact gccctaaaca tggaaaccaa acctgttcga
      361 ggtactccaa tatgttcata ggaagtagct ggggttgccc ctcttgtggt aatgagcaag
      421 ctgcaaaagc cggtatagcg acccttagga agaatcacat agcgttagaa atgctgaaac
      481 aggctgtaac aggtatgacc aagcaagagc gcatcacgac gcaagcctac aatgagatga
      541 ccaaatccgt ggcaggttca aacagcatag tccttaacga tgtccaaggc gatacgacca
      601 tcaacaacca tcatacgcat acgcacaacc acagcgatgc cgatggcaaa gcactgtcga
      661 tgaggctcac accccgtcct ttgttgtcag accgtcaggc ggcggctttc gcccgtacag
      721 gcaaactcac gggcagtttc gacctgtttg cttcggtggt cgccccctcg cagtacacgt
      781 ttgccgttgc catgcccgac acgtccatgt cgccggttat cgaaaaggga gacttgctgg
      841 tggtcgagcc gcgtatgcgc cctgcggacg aggacatcgt gctgattgaa ctgtccgaca
      901 agcggctggt cgtcgcgcac cttgttatcg atattgcggg caggatgctg atttatcaga
      961 cgggcaggcc gtctgaagcc tttgacctgc ccgaaggcag cacgatttta ggtgtggtgc
     1021 tggaggtcaa aaaacggttt atgtccgccg cacaggcgag aaggcgtgtt gattcggatt
     1081 accacccctg atgtgtggac ggttggtacg atttccgctt ccaaaacgtc gtgtacgcgc
     1141 ccgaccgcag cccggaaatc agccgtatgc tttcttcgat tttggcaggc tacgcgtggg
     1201 ataccgaaaa cccgttcgtg gcgaaatccg aacaacgcct gactgccttg tcagaatggg
     1261 tcggtcagct ggaaaccgaa tatagtgaat taaatttaaa cc
//
LOCUS       DAWKJW010000242         1290 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.242, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000242 DAWKJW010000000
VERSION     DAWKJW010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.242"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(232..1032)
                     /locus_tag="WJJ54_001923"
     CDS             complement(232..1032)
                     /locus_tag="WJJ54_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEZ7342734.1"
                     /translation="MKKTIFNITKMDCPSEEQLIRMRLKDVSDIYELQFDIAGRCLTV
                     YHDNQDTTILQVLEPLNFDSHIISTEVIVDKIVFNKPDEHLEKRLLYQVLMINFVFFI
                     IECSVGIFANSMGLIADSLDMLADSFVYILALSAIGMTLAYKKRVAFLAGITQIILAL
                     FGVIEVIRRFIGAEQLPNYQLMIGTAFLALIANWLCLYLLSKNQNKEIHIKASMIFTS
                     NDIIINIGVIAAGALTLLTHSSYPDLIIGMIVFVIVLFGARNILKLAK"
BASE COUNT          425 a          250 c          224 g          391 t
ORIGIN      
        1 gtctgagatt tggtcaaatc caaaggcgac attcttagac cctgtgtgta aatcaggggt
       61 atttttgcgt gaaatcgtca aacgcttgga tgaaggcttg accaatcaaa taccagataa
      121 acaaactcgc attaaccaca ttttaaaaaa tcaagttttt ggaagtactg ccacgtatgt
      181 aggtagcttt gaccgatatt tgcataaaaa ctcctttgct ggtgaaagga attattttgc
      241 caattttaaa atatttctgg caccaaatag tacaatgaca aagacaatca tgccaatgat
      301 taaatcagga tagctagaat gagtcaataa cgtcaatgct cccgccgcta tcacaccgat
      361 attgatgata atgtcattgg atgtaaaaat catgctggct ttgatatgga tttctttatt
      421 ttgatttttg ctcagtagat ataagcacag ccagtttgca atcaatgcca aaaatgccgt
      481 gccaatcatc agttgataat tgggcagctg ctcagcaccg ataaaacgcc taatcacttc
      541 tatcacccca aataacgcca atattatctg cgttatcccc gccaaaaatg ccacacgttt
      601 tttatacgcc agcgtcatac caatggctga tagcgccaat atatagacaa agctgtccgc
      661 cagcatatct agactatcag caatcagccc catagaatta gcaaaaatac caaccgaaca
      721 ctctatgata aaaaacacaa agttaatcat gagcacttga tataataatc ttttttctaa
      781 gtgctcatca ggcttgttaa acactatctt atcaacaatc acttcggtgg aaatgatatg
      841 actatcaaaa ttaagcggtt caagtacttg taaaatcgtt gtatcttgat tatcgtgata
      901 gacggttaag caccgcccag caatatcaaa ctgtaattca taaatatcag acacatcttt
      961 taaacgcatg cgaatgagct gttcttcgga cgggcagtcc attttggtaa tgttaaaaat
     1021 ggtctttttc atctatttag ttccttgttt tgatcaggtt ggctcaaata aatctgtgtt
     1081 tatattgctg cttggtaatt tttggatggt ttgagtaaat tgattaggtt aaaatttacc
     1141 tttggaagta ccgccacgca taatagttta gatatgttta taatctctgg ataaaaaaac
     1201 gtaataagtg tttgctggat aacaaagtcc aaaccaatag cagataaaat aaggcatcca
     1261 ccccctttct tcattaagga taagagatat
//
LOCUS       DAWKJW010000243         1287 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.243, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000243 DAWKJW010000000
VERSION     DAWKJW010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.243"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            28..>1287
                     /locus_tag="WJJ54_001924"
     CDS             28..>1287
                     /locus_tag="WJJ54_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly/adherence protein PilC"
                     /protein_id="HEZ7342735.1"
                     /translation="MNKQNQPEVKREGSYSTLREKDRKRKFDFNANNGGGGSVSFNNS
                     DELVSRQNGTAVFGTATYLPPYGKVSGFDDKRLKERGNAVNWIHTTHPGLIGYSYAGV
                     VCRNSTGCPQLVYKTRFSFDNTGLAKNAGMLDSHPDPSRENSPIYKLKDYPWLGVSFN
                     LGSENTVKNSQSSNRLISSFSENNNNQTIVSTTESHPISLGDGQREHTAVVYYLNAKL
                     HLLNKKQIQNITDKTVQLGVLKPSIDVKTQRTEFGGILSFWASWDIKDTGQIPVKLGL
                     QQVKAGRCVNANNPNKSTKAPSPALTAPALWFGPVQNGKVQMYSASVSTYPDSSSSRI
                     YLQNLKRKTDSNRPGRYSLADLSASDIQSKEPTFTSRQTIIRLDGGVRHIQLDRNNEV
                     TSFNGDNGTFGIVNEGSVVPESNEWKKV"
BASE COUNT          379 a          325 c          302 g          281 t
ORIGIN      
        1 gcggaaaccc gtaactacgc tattgtcatg aacaaacaaa atcagccgga ggtaaagcgg
       61 gagggttcat attcaacctt aagggaaaaa gacaggaaac gcaaatttga ctttaatgcg
      121 aacaacgggg gtggaggctc tgtctcattc aacaatagcg atgagcttgt ttctcgacaa
      181 aacggtactg ccgtttttgg cacagccacc tacctgccgc cctacggcaa ggtttccggt
      241 tttgatgaca aaaggctgaa agagcgcggc aatgccgtta attggattca tacgacccac
      301 ccagggttga taggctacag ctacgccggt gtcgtatgca gaaacagcac aggctgtccc
      361 caacttgtct ataaaacccg attttccttc gacaacaccg gtttggcaaa aaatgcgggc
      421 atgctggata gtcacccgga cccaagccgc gaaaattcgc ccatttacaa attgaaagat
      481 tatccatggt tgggcgtatc tttcaatttg ggcagcgaga ataccgtcaa aaatagccaa
      541 tcatccaaca gattgatatc ttcttttagt gaaaacaata ataatcaaac catcgtctct
      601 acgacagaaa gccaccctat ttcccttggc gacgggcagc gcgaacatac cgccgtggtc
      661 tattatctga acgccaagct gcacctgctg aataaaaaac agattcaaaa tatcaccgac
      721 aaaacagtgc agttgggtgt cttgaagccg agcatcgatg tgaagacaca aaggacggag
      781 tttggcggca ttctatcttt ttgggctagt tgggacatta aagataccgg gcagattcca
      841 gtcaagctcg gcctgcagca agtcaaagca ggccgctgcg tcaacgcaaa taaccccaat
      901 aagagtacca aagccccttc ccccgccctg actgcccccg cgctgtggtt cggacctgtg
      961 caaaatggta aggtgcagat gtattccgct tcggtttcca cctaccccga cagttcgagc
     1021 agccgcatct accttcaaaa tctgaaaaga aaaaccgact ccaacagacc cggccgctat
     1081 tccctcgcag acttgagtgc gtcggatatt caaagtaaag agccgacttt cacaagtcgg
     1141 caaacaatca tccgcttgga tggtggcgta cggcatatcc aactggatag aaacaatgag
     1201 gtcactagtt ttaatggcga caacggaact ttcggcattg ttaatgaagg gagcgtcgtt
     1261 cctgaaagca acgagtggaa aaaagtg
//
LOCUS       DAWKJW010000244         1232 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.244, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000244 DAWKJW010000000
VERSION     DAWKJW010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.244"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(187..540)
                     /locus_tag="WJJ54_001925"
     CDS             complement(187..540)
                     /locus_tag="WJJ54_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342736.1"
                     /translation="MDKICVTEQDVNILASDRNYELNIEIFIDNIIHFQITDESYKVK
                     FSEYLFENKEKNDWDRNPAINYFFEIIDDSYMDWLKEESFDFFEKKYYKAYIFFFSDS
                     VIEVISSTEPVFYSK"
     gene            complement(614..964)
                     /locus_tag="WJJ54_001926"
     CDS             complement(614..964)
                     /locus_tag="WJJ54_001926"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342737.1"
                     /translation="MPSETVFNFQATFPLFETGYWELSSSKILHLLLPRQHLGQNGRR
                     LKSKHRPSCCRLRMSTGQPQCRRNRRSRLQHCRRQSRKVGKNGKTGEIKADGRKVNVR
                     IDSTEADLLYPAGQ"
     gene            complement(983..>1232)
                     /locus_tag="WJJ54_001927"
     CDS             complement(983..>1232)
                     /locus_tag="WJJ54_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342738.1"
                     /translation="LIEVRRKYPYPMDIPRDIVIGISTIIDFLMVPNWELFEIKASPW
                     LPDSVGIHERYERFTTMLRYIFTEKDIVNVRFDYYNKK"
BASE COUNT          342 a          242 c          209 g          439 t
ORIGIN      
        1 cacataatta tttaccttta tccattgctt cccaaccgat acatccggta ttttagcttc
       61 tccttttccg tcaaacactc ctttggttac ctgctttgtg tcaaaaatac cgtctgaaag
      121 ccgaatattg tttcagacgg cattttgatt gttgggtttt taatcagagc tttgtttgat
      181 aatttgttat tttgaataaa atacaggttc tgtcgagctg ataacttcta ttacagaatc
      241 gctaaaaaag aaaatataag ccttataata tttcttttca aaaaaatcaa aactttcttc
      301 tttcaaccag tccatataac tgtcatctat tatctcgaaa aaataattta tagcaggatt
      361 tctatcccaa tcattttttt ctttattttc aaataaatat tctgaaaatt ttactttata
      421 agattcatct gttatttgaa aatgaattat attgtcaata aatatttcaa tatttaattc
      481 ataatttcgg tcggatgcca aaatgttcac atcttgttcg gtaacacaaa ttttgtccac
      541 ataaaatctg tgattattgt tagaaaattg taatggttta cacaatcgtt ttccatatct
      601 aatttttgtt ttcttattgc cctgccggat aaagcaggtc tgcctccgta ctgtctatcc
      661 tcacatttac tttcctgcca tcggctttta tctccccggt tttaccgttt ttgccaactt
      721 tgcggctttg gcggcggcaa tgttgaaggc ggcttcgacg gtttcggcgg cattggggtt
      781 gacccgtact catccgcaaa cggcaacacg acggacggtg tttgcttttc agccgtctgc
      841 cgttttgacc aaggtgctgc cgtggaagga gcaggtgtag gatttttgaa gaacttagtt
      901 cccaatatcc tgtttcaaat aaggggaagg tcgcctgaaa attaaacacg gtttcagacg
      961 gcattttgat tgccggggtt tgctattttt tgttgtaata atcaaatcgc acgttgacta
     1021 tgtctttctc ggtaaaaata taacggagca ttgttgtgaa tctttcataa cgttcatgaa
     1081 ttcccacgct atcaggtagc caaggggaag ctttaatttc gaaaagctcc caatttggaa
     1141 ccattaaaaa atcaataatg gtactgattc caatcacaat atcccttggt atatccatcg
     1201 gataaggata ttttctccta acctcgatta aa
//
LOCUS       DAWKJW010000245         1168 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.245, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000245 DAWKJW010000000
VERSION     DAWKJW010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1168)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1168)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.245"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            25..816
                     /locus_tag="WJJ54_001928"
     CDS             25..816
                     /locus_tag="WJJ54_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HEZ7342739.1"
                     /translation="MNLFFDTELGKQQNKATHKIRVMSEAWLEKNGYCPCCGSKPMQR
                     FANNKPVADLFCPNCHEQYELKSKNQKTIGNSVPDGAYRTMLERIRSDTNPNFFFLAY
                     KKADYSIRQLVLVPKHFITPDMIIPRNKGIKNRPNHIMCSINLAPLPESGKIFLIDDS
                     RIIEPETVLKKWQSNLFLRNQNAERKGWLLAVMKCIDQLPEEFTLSQMYEFEEKLSIQ
                     FPQNNHIRDKIRQQLQILRDQNTIEFIGRGLYKKIDKLRPTPKAF"
     gene            946..1059
                     /locus_tag="WJJ54_001929"
     CDS             946..1059
                     /locus_tag="WJJ54_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl-tRNA synthetase"
                     /protein_id="HEZ7342740.1"
                     /translation="MRDSDKPAASEGAVKFIEGNPAKKIIAVPGRLVNIVV"
BASE COUNT          397 a          256 c          220 g          295 t
ORIGIN      
        1 aaacttaatc tcaaaatcca aaacatgaat ttatttttcg ataccgaatt gggaaagcaa
       61 caaaataaag caacccataa aatccgtgta atgagcgagg cttggctgga aaaaaacggc
      121 tactgtccct gttgcggaag caagccgatg cagagatttg ccaataacaa acctgttgca
      181 gacctctttt gcccaaattg ccacgagcaa tatgaattaa agagtaaaaa tcaaaaaacc
      241 ataggcaaca gtgtgcctga cggtgcatat cgcaccatgt tggagcgcat ccggtcagat
      301 accaacccaa actttttctt tcttgcatat aaaaaagcgg attactccat acggcaattg
      361 gtgcttgtac ccaaacattt catcacgccg gatatgatta ttcccagaaa taaaggcatt
      421 aaaaaccggc cgaaccacat tatgtgttcc atcaatctcg cccctttgcc tgaaagcgga
      481 aaaatattct taatagacga ttcccgcatt atcgaacccg aaaccgttct gaaaaaatgg
      541 caatccaatc tgtttttacg caaccaaaat gcggagcgca aaggttggct tttggctgtt
      601 atgaaatgta tcgaccaact tcccgaagaa ttcacattgt cgcaaatgta tgaatttgaa
      661 gaaaaactat ccatccaatt tccccaaaac aaccatatca gagacaaaat ccgccaacag
      721 ttgcaaattt tgcgcgacca aaatacgatc gaattcattg gtcgcggact ttacaaaaaa
      781 atcgacaaat tgcgtccgac tcccaaggcg ttttaatttc aaatcatgat actgaattca
      841 caagggatat ttattcttct gctattctga aaacagttga agtacagcgc aatattgccg
      901 caaaaggcag cagccgtaag aaggtcgggg aattattggc aatttatgcg tgattccgac
      961 aaaccggccg cctccgaagg cgcagtgaaa ttcatagaag gtaatcctgc caagaaaatc
     1021 atcgccgtac cgggcagact ggtgaacatc gtggtgtaaa tctttttaaa aacattaaac
     1081 aatgttaaga tgccgtccga aatccgtttt ggattcagac ggcatttttt gaaatttaat
     1141 tttttaagga gtaaacctaa atatgaaa
//
LOCUS       DAWKJW010000246         1156 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.246, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000246 DAWKJW010000000
VERSION     DAWKJW010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.246"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            7..>1156
                     /locus_tag="WJJ54_001930"
     CDS             7..>1156
                     /locus_tag="WJJ54_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HEZ7342741.1"
                     /translation="MEVKKISSFIICGLVLITLTACGAIPSSGPSAKKIVSLGQQSEA
                     QIPEVELIDVNHAVAQSLYKAQMNQSFTQFGDGYASTGTLNIGDVLDIMIWEAPPAVL
                     FGGGLSSMGSGSAQQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKM
                     ANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQ
                     LTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARG
                     LSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYR
                     VNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGAN"
BASE COUNT          261 a          224 c          338 g          333 t
ORIGIN      
        1 tatattatgg aagtaaaaaa aatatcttct tttatcatct gcggtttggt acttattacg
       61 ctgacggcat gtggagccat tccttcctca ggtccaagtg ctaaaaagat tgtctcctta
      121 gggcaacagt ccgaagctca aattcctgaa gtggagttga ttgacgtcaa tcatgctgtg
      181 gcgcagtctt tgtataaagc tcagatgaat cagtctttta cccagtttgg cgatggttat
      241 gcttctaccg gtacgctaaa tattggtgat gtattggata ttatgatttg ggaagcgccg
      301 ccggcggtat tgtttggcgg tgggctttct tcgatgggct cgggtagtgc acagcaaacc
      361 aagttgccgg agcagttggt cacggcacgt ggtacggttt ctgtgccgtt tgttggcgat
      421 atttcggtgg tcggtaaaac gcctggtcag gttcaggaaa ttattaaagg ccgcctgaaa
      481 aaaatggcca atcagccgca agtgatggtg cgcttggtgc agaataatgc ggcaaatgta
      541 tcggtgattc gcgcaggcaa tagtgtgcgt atgccgttga cggcagccgg tgagcgtgtg
      601 ttggatgcgg tggctgcggt aggtggttca acggcaaatg tgcaggatac gaatgtgcag
      661 ctgacacgtg gcaatgtagt acgaactgtt gccttggaag atttagttgc aaatccgcga
      721 caaaatattt tgctgcgtcg cggtgatgtg gttaccatga ttaccaatcc ctataccttt
      781 acgtctatgg gtgcggtggg gagaacacaa gaaatcggtt tttcagccag aggcttatcg
      841 ctttctgaag ccattggccg tatgggcggt ttgcaagacc gccgttctga tgcgcgtggt
      901 gtgtttgtgt tccgctatac gccattggtg gaattgccgg cagaacgtca ggataaatgg
      961 attgctcaag gttatggcag tgaggcagag attccaacgg tatatcgtgt gaatatggct
     1021 gatgcgcatt cgctattttc tatgcagcgc tttcctgtga agaataaaga tgtattgtat
     1081 gtgtcgaatg cgccgttggc tgaagtgcag aaattcttgt cgtttgtgtt ctcgccggtt
     1141 accagtggcg cgaaca
//
LOCUS       DAWKJW010000247         1137 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.247, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000247 DAWKJW010000000
VERSION     DAWKJW010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1137)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1137)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.247"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            57..782
                     /locus_tag="WJJ54_001931"
     CDS             57..782
                     /locus_tag="WJJ54_001931"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEZ7342742.1"
                     /translation="MPRFHLPENLSVGQTVALPDNIVRHLNVLRVRPNENITLFDGKG
                     KAHAARLTVLEKRRAGAEILHEETADAESPLNITLIQSISSGERMDFTLQKSVELGVT
                     AIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKM
                     PSESTKLIMSINRARKLGDIRHPSGAIVFMVGPEGGWTEQEEQQAFEAGFQAVTLGKR
                     ILRTETAPLAALAAMQTLWGDFA"
BASE COUNT          305 a          371 c          264 g          197 t
ORIGIN      
        1 gtccgtttcc atcacgccgc tgcgacagat tataaccgtc cgaaccgcca aaaactatgc
       61 cccgattcca cctgcccgaa aacctttccg tcggacaaac cgtcgccctg cccgacaaca
      121 tcgtccgcca cctcaacgtc ctgcgcgtcc gccccaacga aaacatcacc ctcttcgacg
      181 gcaaaggcaa ggcacacgcc gcacggctga ccgttttgga aaaacgccgc gccggggcgg
      241 aaatcctgca cgaagaaacc gccgatgccg agtccccgct gaacatcacg ctcatccaat
      301 ccatatcttc cggcgaacgt atggacttta ccctgcaaaa aagcgtcgaa ctcggcgtaa
      361 ccgccataca gcccgtcatc agcgaacgct gcatcgtccg cctcgacggg gaacgcgccg
      421 ccaaacgcct cgcacgctgg caggaaatcg tcatctccgc gtgcgaacaa agcggcagga
      481 acaccgttcc ccccgtactg cccatcatcg gctaccgtga agcactcgac aaaatgccgt
      541 ctgaaagcac caagctgatt atgagcatca accgcgcccg caaactcggc gacatccgcc
      601 acccgtctgg cgcaatcgtc tttatggttg ggcccgaagg cggctggaca gaacaggaag
      661 aacaacaggc atttgaagct ggctttcagg cggttacact cggcaaacgg attttacgca
      721 cagaaaccgc cccactcgcc gccctcgccg ccatgcagac gctttggggc gatttcgcat
      781 aaacagaaat gccgtctgaa acccgttcag acggcatttt gcagccgatt aagatagtag
      841 gttcaaataa gatttccccc gccgtcattc ccgcgaaagc aagaatctag aaacgaaaaa
      901 ctacagggat ttatccgaaa caacaaaccc tctccgccgt cattcccgcg caggcgggaa
      961 tctagaaacg aaaaactaca gggatttatc cgaaacaaca aaccctctcc gccgtcattc
     1021 ccgcgaaagc gggaatctag aaatttaacg ttgcggtgat ttattggaaa tgactgaaac
     1081 tcaacggact ggattcccgc ctgcgcggga atgacaaagt ggaagttgcc cgaaact
//
LOCUS       DAWKJW010000248         1126 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.248, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000248 DAWKJW010000000
VERSION     DAWKJW010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.248"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            81..1046
                     /locus_tag="WJJ54_001932"
     CDS             81..1046
                     /locus_tag="WJJ54_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ7342743.1"
                     /translation="MLRLTALAVCTALALGACSPQNSDSAPQAKEQAVSAAQSESASV
                     TVKTARGDVQIPQNPERIAVYDLGMLDTLSKLGVKTGLSVDKNRLPYLEEYFKTTKPA
                     GTLFEPDYEALNAYKPQLIIIGSRAAKAFDKLNEIAPTIEMTADTANLKESAKERIDA
                     LAQIFGKQAEADKLKAEIDASFEAAKTAAQGKGKGLVILVNGGKMSAFGPSSRLGGWL
                     HKDIGLPAVDEAIKEGSHGQPISFEYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLNNP
                     LVAETTAWKKGQVVYLVPETYLAAGGAQELLNASKQVADAFNAAK"
BASE COUNT          286 a          322 c          295 g          223 t
ORIGIN      
        1 ttatcattta tcctttctaa agccgttccg gtttgtccga ccggcggctt tgccccaata
       61 tccccatttt ggagacacct atgttacgtt tgactgcttt agccgtatgc accgccctcg
      121 ctttgggcgc gtgttcgccg caaaattccg actctgcccc acaagccaaa gaacaggcgg
      181 tttccgccgc acaatccgaa agtgcgtccg ttaccgtcaa aaccgcgcgc ggcgatgttc
      241 aaataccgca aaaccccgaa cgtatcgccg tttacgattt gggtatgctc gacaccttga
      301 gcaaactggg cgtgaaaacc ggtttgtccg tcgataaaaa ccgcctgccg tatttagagg
      361 aatatttcaa aacgaccaaa cccgccggaa ctttgttcga gccggattac gaagccttaa
      421 acgcctacaa gccgcagctc atcatcatcg gcagccgcgc agccaaggcg tttgacaaat
      481 taaacgaaat cgcgccgacc atcgaaatga ccgccgatac cgccaacctc aaagaaagtg
      541 ccaaagagcg catcgacgcg ctggcgcaaa tcttcggcaa gcaggcggaa gcggacaagc
      601 tgaaggcgga aatcgacgcg tcttttgaag ccgcgaaaac tgccgcacaa ggcaaaggca
      661 agggtttggt gattttggtc aacggcggca agatgtccgc cttcggcccg tcttcacgac
      721 tgggcggctg gctgcacaaa gacatcggtt tgcccgctgt tgacgaagcc atcaaagaag
      781 gcagccacgg tcagcctatc agctttgaat acttgaaaga gaaaaatccc gactggctgt
      841 tcgtccttga ccgcagcgcg gccatcggcg aagagggtca ggcggcgaaa gacgtgttga
      901 ataatccgct ggttgccgaa acaaccgcct ggaaaaaagg acaagtcgtt tacctcgttc
      961 ccgaaactta tctggcagcc ggcggcgcgc aagagctgct gaacgcgagc aaacaggttg
     1021 cggatgcttt taacgccgcg aaataatgaa acggcggcat tcgatgccgt ctgaaacacg
     1081 gatgcaaacc gcttcccgtg tttcagacgg cattgcccga tacggg
//
LOCUS       DAWKJW010000249         1102 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.249, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000249 DAWKJW010000000
VERSION     DAWKJW010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1102)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.249"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(160..546)
                     /locus_tag="WJJ54_001933"
     CDS             complement(160..546)
                     /locus_tag="WJJ54_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342744.1"
                     /translation="MWKIYKENSTDLNFAIGSIYCQAINLTEFKMWVEKIIREVDLDE
                     IPNYFFDLIDFQSLYDLIDIIGFVPENNLSKNQDNALTGIAFLRGIDVYDPPISKEKA
                     LKALKKHPEIYQRFQHFFPFVELPPL"
     gene            complement(549..794)
                     /locus_tag="WJJ54_001934"
     CDS             complement(549..794)
                     /locus_tag="WJJ54_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ7342745.1"
                     /translation="MKDSTGQMRLATKDLAEAIKRGEVRSSAFTTKQLKAIEKGESKI
                     PDYTWHHHQDTGRMQLVPEWEHSKTGHIGGTAMDKGK"
     gene            complement(872..>1102)
                     /locus_tag="WJJ54_001935"
     CDS             complement(872..>1102)
                     /locus_tag="WJJ54_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity protein 31"
                     /protein_id="HEZ7342746.1"
                     /translation="KLDFYSEVIIKDSCPNDLLENGETIKGKKGVVLGISEEDGIIYG
                     YTILLFDIKYCIYIDKKYIIPTGKKFSRDDFY"
BASE COUNT          330 a          198 c          184 g          390 t
ORIGIN      
        1 gttaggacga gggggatgag gaggagcagg gttttcatgg cagggtttgt tttgttttga
       61 acgagtttga gtgtaaatgg attttaaggg tttgtaaacg aaagaggcaa aaatgccgtc
      121 tgagcggcgg aaatggcttt cagacggcat tttgactgtt taaagcgggg gcagttctac
      181 aaacggaaag aaatgctgaa acctctgata aatttcagga tgtttcttta aggcttttaa
      241 tgctttttct tttgaaatgg gaggatcgta gacatctatc ccccttaaaa aagcaatacc
      301 ggttaatgca ttatcctgat tttttgataa gttattttcg ggaacaaatc ctataatatc
      361 aatcagatcg tatagtgatt gaaaatctat caaatcaaaa aaataatttg gaatttcatc
      421 taaatccact tcccttatga ttttttcgac ccacatttta aattcggtaa gattgattgc
      481 ttggcaatat atactgccta tggcaaaatt taagtcggtg ctattttctt tataaatttt
      541 ccacataatc atttaccttt atccattgcc gtccctccta tgtgaccggt tttagaatgt
      601 tcccattcag gtacaagctg catacgtcca gtatcctgat gatgatgcca agtataatcc
      661 ggtattttag attctccttt ttcgattgcc tttagttgct ttgttgtaaa agcagaacta
      721 cgtacttctc ctcgtttaat ggcttccgcc aaatccttgg ttgccagcct catttgccct
      781 gtagaatcct tcaatctgaa ctccttatgc ttacataaac ataattacca gtttcagtat
      841 ctaaaaaact tgcttaaatt acttaaatta gctaataaaa atcatcgcga gagaattttt
      901 ttccagtcgg tataatatat ttcttatcta tatatataca atattttata tcaaaaagta
      961 aaatagtata gccatagatt ataccatctt cttcgcttat acctaatacc actccttttt
     1021 ttcctttaat agtctcacca ttttctaaca aatcattagg gcaagaatct tttataataa
     1081 cttcagagta gaaatctaat tt
//
LOCUS       DAWKJW010000250         1073 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.250, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000250 DAWKJW010000000
VERSION     DAWKJW010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1073)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1073)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.250"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(122..550)
                     /locus_tag="WJJ54_001936"
     CDS             complement(122..550)
                     /locus_tag="WJJ54_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mor transcription activator family protein"
                     /protein_id="HEZ7342747.1"
                     /translation="MGFEKVEHLLPDTVLDIVDVIGLAATEQLVKAIGGARFKFGKGK
                     VDTERLAILVEAIGEVKTHELLQVYGGEELYVPRCGKALIQLRNHRFYQEFVKLRDID
                     KESGLMAMTKLCPKYGISSRTGYTIINEMSRPAAQQAALF"
     gene            complement(531..965)
                     /locus_tag="WJJ54_001937"
     CDS             complement(531..965)
                     /locus_tag="WJJ54_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gp16 family protein"
                     /protein_id="HEZ7342748.1"
                     /translation="MRRALIAKIKIAQKELGLDDGTYRAVLERVTGKRSCADMDVSEL
                     ESVVADMRSHGFKPKAKGNPHGKPHLRRTSSAAMLDKVEALLTVGGKHWNYAHAMARR
                     MFGKDKVEYLDDTQLHKLVAALQIAENRKTEKAGGDDGVRKS"
BASE COUNT          279 a          320 c          195 g          279 t
ORIGIN      
        1 tttgaaaacc ccattaaacc gtctttaacc catcgtcccg aacggtagat gtttcacccc
       61 tgcaaaccaa aaaaaagacc gtctgaatac agacggccaa agcctggtca cacatcactg
      121 cctaaaataa agctgcctgc tgtgccgcag gtcggctcat ttcattgata atcgtatatc
      181 ccgttcgtga agagatgccg tatttagggc atagcttcgt catcgccata agcccgctct
      241 ccttatcaat atcgcgcaat ttgacaaact cctgataaaa cctatggttt ctcaactgta
      301 ttaacgcctt gccgcaccgt gggacataca attcctcgcc accatatacc tgcaacagct
      361 catgtgtttt cacttcgccg atggcttcga ccaaaattgc caaacgctcg gtgtccacct
      421 tgcccttacc aaatttaaac cgcgccccgc caatcgcctt gaccagctgt tccgtcgctg
      481 ccagtccgat gacatccaca atgtccaaca cggtatccgg caataaatgt tcaacttttt
      541 cgaaccccat catccccacc cgctttttcc gttttcctgt tttccgcaat ctgcaacgca
      601 gcaaccagtt tatgtagctg cgtatcgtct aaatattcga ccttatcctt accaaacatc
      661 cgccgcgcca ttgcgtgtgc atagttccaa tgtttgccgc cgacggtcag cagggcttcg
      721 actttgtcca acattgccgc tgatgatgtc cgacgcagat gtggtttacc gtgtgggtta
      781 ccttttgctt taggcttaaa tccgtgcgac cgcatatcag cgacaacaga ctcaagttcg
      841 gaaacatcca tatccgcaca cgaccgcttg cccgtcacgc gctccaacac cgcgcgatag
      901 gtaccgtcgt ccaagcccag ctccttttgg gcaattttaa tttttgcaat caacgcccgg
      961 cgcatctcaa acccataaaa cacaatatat tgactaatta acgcatatta taccaataaa
     1021 atacaatata tagtattaag ccgatgtttt ttgcgaaacg gacagacatg aaa
//
LOCUS       DAWKJW010000251          906 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.251, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000251 DAWKJW010000000
VERSION     DAWKJW010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 906)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 906)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.251"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(55..834)
                     /locus_tag="WJJ54_001938"
     CDS             complement(55..834)
                     /locus_tag="WJJ54_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HEZ7342749.1"
                     /translation="MKLVRPQKISDQVLSVLEERIAEGVYAEGGKIPPERVLAEEFGV
                     SRPSVRSALNVLVARQVLEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFDFS
                     CHIEGCMAALAAERRTDADLKRIGFWLEKFEEACESGNLEHQSEADVSFHQTIADAAH
                     NLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQHRVLYEAISNRRPGEASEA
                     AKAHLNYVASSILKDREYQSRNRHADTLAQNDLKRVQDWEV"
BASE COUNT          227 a          287 c          176 g          216 t
ORIGIN      
        1 aatttagttc actataccga tacatccgaa tatgccagac cgtctaaacg gtattcatac
       61 ctcccaatcc tgcacgcgct tcaaatcgtt ttgcgccaaa gtatctgcgt ggcggttacg
      121 gctctgatat tccctgtctt tcaagatgct gctcgccaca taattcaaat gtgcctttgc
      181 cgcctccgaa gcctcgcccg gccggcggtt tgatattgcc tcatacaata cacggtgctg
      241 cgccatcagc ttcggacgcg gatcttcttc ctgattcaga taaataaggc tgctgcgcgt
      301 ctgccggtac agcattttca acaaaccgcc cgacaaatgg ctgaacaaca aattgtgcgc
      361 cgcatcggca atcgtctgat gaaagctgac atcagcttcg ctctgatgtt ccaaattgcc
      421 gctttcgcac gcctcctcaa acttttcaag ccaaaaccca atccgcttca aatcggcatc
      481 cgtgcggcgt tctgccgcca atgccgccat acagccctcg atgtggcaac tgaaatcaaa
      541 aacatcctgt tcccaattgg aatgcttgcc caaaagctcc tgccaacttt gcaaaaaatc
      601 ctgctgcggc ttgaccgaaa cataataacc gtctccctgc ctcgcttcca aaacctgacg
      661 ggcgaccaaa acattcaatg ccgacctgac cgacgggcgc gaaacgccga actcttccgc
      721 caaaacgcgt tcgggcggaa tcttgccccc ttccgcgtaa accccttccg caatgcgctc
      781 ctccaatacc gacaatacct gatcgctgat tttctgaggc cttaccagtt tcatcactcc
      841 tcctttataa agattccctg cagaaccctt ccgaaatata gtggattaac aaaaatcagg
      901 acaagg
//
LOCUS       DAWKJW010000252          906 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.252, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000252 DAWKJW010000000
VERSION     DAWKJW010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 906)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 906)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.252"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..216
                     /locus_tag="WJJ54_001939"
     CDS             <1..216
                     /locus_tag="WJJ54_001939"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342750.1"
                     /translation="ADAGDVYCVYNIRLKQYTACQVTRVEEHGGKKTHATLLALDWQG
                     NKPLGAEELADLKPLYKDLKNNIGNIV"
     gene            547..>906
                     /locus_tag="WJJ54_001940"
     CDS             547..>906
                     /locus_tag="WJJ54_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342751.1"
                     /translation="MYWERGLHMYKASAVVPTGYVRVGNTAPLVGEDTQRYASFWGDG
                     YDVYRQLRWQQISEKQRKAFKKAAKSKKTVMFAGREYGISKQNLSDVWDDFEDAMELK
                     AFPCLSSLFLTKWHKNLY"
BASE COUNT          281 a          146 c          213 g          266 t
ORIGIN      
        1 gctgatgccg gagacgtata ttgcgtctat aacatcagac tgaagcagta cactgcctgc
       61 caggttaccc gagttgaaga acacggtggc aaaaaaacac atgcgaccct gctggctttg
      121 gactggcagg gcaacaaacc gcttggggcg gaggagctgg cggatttgaa accgctttac
      181 aaagacttaa agaataatat tggaaatatt gtatgaacaa aaaattaaac tatattttta
      241 tgttggactg tttagggttg gtgatattgt ttacttgtat aatagctact tttgaaagag
      301 attatggatt taaaattttt actaattcta agaggcctga attttattat tggattggaa
      361 tgttttatta tggaattatt tcttgctggt ttgattatca attaatttca acaaaggcga
      421 attcgtataa aagaaaagtt aaacaatata aaattttttc agtaatattt tcagttttga
      481 tatttatttc tactatagta aaactttaaa ttttggagca aaaatttatg agcgattcaa
      541 ttgaatatgt attgggaacg cggtctgcac atgtataagg caagtgccgt cgtgccgacg
      601 ggatatgtac gggttgggaa taccgcgccg ctggtcggcg aagacacgca acggtatgcc
      661 tctttttggg gcgacggcta cgacgtgtac cgtcagttga gatggcagca gatatccgaa
      721 aaacagagaa aggcattcaa aaaagccgct aaaagcaaaa agaccgtgat gtttgccgga
      781 cgggaatacg gcatatccaa acagaatttg agcgatgttt gggatgattt tgaagacgcg
      841 atggaactga aggcgtttcc ctgcctgtct tcgctgtttc tgaccaaatg gcataaaaat
      901 ctatat
//
LOCUS       DAWKJW010000253          904 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.253, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000253 DAWKJW010000000
VERSION     DAWKJW010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 904)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 904)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.253"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(87..719)
                     /gene="mtrR"
                     /locus_tag="WJJ54_001941"
     CDS             complement(87..719)
                     /gene="mtrR"
                     /locus_tag="WJJ54_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     repressor MtrR"
                     /protein_id="HEZ7342752.1"
                     /translation="MRKTKTEALKTKEHLMLAALETFYRKGIARTSLNEIAQAAGVTR
                     GALYWHFKNKEDLFDALFQRICDDIENCIAQDTEDAEGGSWAVFRHTLLHFFERLQSN
                     DIYYKFHNILFLKCEHTEQNAAVIAIARKHQAIWREKITAVLTEAVENQDLADDLDKE
                     TAVIFIKSTLDGLIWRWFSSCERFDLGKTAPRIIGIMMDNLENHPDLRRK"
BASE COUNT          201 a          200 c          237 g          266 t
ORIGIN      
        1 tgtattttta gaagaaggct ttgtgtcatt ttgatgccgt ctgaaagggt ttgttcgttt
       61 cagacggcat tgttaccaag gcttgattat ttccggcgca ggtcgggatg gttttccaag
      121 ttgtccatca ttatcccgat gatgcgcggg gcggttttgc ccaaatcgaa acgttcgcag
      181 gaagagaacc accgccaaat cagcccgtcc aaggttgatt tgatgaagat aactgccgtt
      241 tccttgtcca aatcgtcagc caaatcctga ttttccaccg cttcggtcaa aacggcggta
      301 attttctcgc gccagattgc ctgatgcttg cgggcaatgg cgataacggc ggcgttttgc
      361 tccgtgtgtt cgcattttaa aaacaggatg ttgtggaatt tgtagtagat gtcgttgctt
      421 tgcagccgct cgaaaaagtg cagcagcgtg tggcggaata ccgcccaaga ccctccttcg
      481 gcatcttcgg tatcttgcgc gatgcagttt tcgatgtcgt cgcagatacg ttggaacagc
      541 gcgtcgaaca agtcttcctt atttttgaaa tgccaataga gcgcgccgcg cgttacgccg
      601 gcggcttggg cgatttcgtt gagcgaggtg cgcgcaatcc ctttgcggta aaaggtttcc
      661 aaggcggcaa gcatcaggtg ttctttggtt ttcaaggctt cggttttggt ttttctcata
      721 atggcgtttt cgtttcgggt cggtttgatg agggcggatt ataaaaaaga ctttgtaacc
      781 atgcaatcgt gtatgtataa tgaaacccat gaaattgaga ctacatctca actttgaaaa
      841 caggcataac ctgctttgca acccgttcga acattcgggt atcaaagcag gcggttttta
      901 tatc
//
LOCUS       DAWKJW010000254          897 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.254, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000254 DAWKJW010000000
VERSION     DAWKJW010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.254"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(38..604)
                     /locus_tag="WJJ54_001942"
     CDS             complement(38..604)
                     /locus_tag="WJJ54_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HEZ7342753.1"
                     /translation="MSLYALLLIALGMSMDAFAVALAKGAAVRMPPRKIAATALVFGT
                     VEALTPLAGWVGGFYAKPFISEWDHWAAFVLLGGLGLKMMREGLSGKAEDVRESKRES
                     WWLTVLTAFGTSIDSMIVGVGLAFMEVNIAFAAAVIGMATTVMVTVGLTAGRALGVLF
                     GRRAEFAGGLVLIAIGTWTLLSHLGLIQ"
BASE COUNT          243 a          286 c          193 g          175 t
ORIGIN      
        1 cgtactggtt tttgttaatc cactatattt tccgacatca ttgaatcaaa cccaaatgcg
       61 acaagagcgt ccatgtaccg atggcaatca acaccaaacc tccggcaaat tccgcacgcc
      121 tgccgaacaa tacgcccaaa gcccttcccg ccgtcagccc gaccgtaacc atcaccgtcg
      181 tcgccatgcc gatgacggcg gcggcaaagg cgatgtttac ctccataaac gccaagccca
      241 ccccgactat catggaatca atactggttc caaaagcagt cagaaccgtc aaccaccagc
      301 tttcccgttt gctttcgcgt acatcttccg ccttgccgga cagcccttcg cgcatcattt
      361 tcagacccag cccgcccagc aggacgaaag ccgcccaatg gtcccattcg ctgataaacg
      421 gtttggcata aaaaccgcct acccagcctg ccagcggcgt gagtgcctca accgtgccga
      481 acaccaaagc cgttgctgca attttgcgcg ggggcatcct gaccgccgca ccctttgcca
      541 atgcgacggc aaacgcatcc atcgacatcc ccagcgcaat caagagcaaa gcgtaaagac
      601 tcataccgca cccatcctca aaaagggcag attatagcaa aacagcaaag cgcgaaaaac
      661 gccgcacgaa aacccacatc ccgtcattcc tgcaaaaaca aaaaatcaaa aacagaaatc
      721 ccgtcattcc cgcgcaggcg ggaatccaga ccggtcggtg cagaaactta ttggataaaa
      781 cggtttcttt agattttacg ttctagattc ccactttcgt gggaatgacg ggatgtaggt
      841 ttccgtgcgg atggattcgt tattcccgcg caggcgggaa tccaaagttg tcggtgc
//
LOCUS       DAWKJW010000255          860 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.255, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000255 DAWKJW010000000
VERSION     DAWKJW010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 860)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 860)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.255"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
BASE COUNT          309 a          157 c          124 g          270 t
ORIGIN      
        1 aaccttcatt aaacaaaaag aagaaatggc agataaatta catacgatat agtggaatat
       61 aaaatattta cggtctaaac cttgttcagt tgcaattttt ttatacttac cttgcgcaaa
      121 aaaatcaaag aaatccatta aactatcttt cacattagaa atttaaaagc taaataatac
      181 gacaaacaat gtgaagtact attcatggtt tatttaaaaa ataatactat tctgaacatt
      241 atttagatac agaaattaac aaattggaac taaacaagct tttaaatact ttaattttat
      301 tggaaagcta taaaaggaac tatagtttca cacactaatt acttcctaat cacttcttta
      361 ttaagaggca caagggattg ggaaggctgt cttggagata agcactgatg ttctaggcaa
      421 acccctccat cttaaagtta aaacaaccac aggcagcctg gaaatgatct atgatctatg
      481 cccatacaag gacattctag atagttttcc ttgttgcttc gtgtatcaca caagatagaa
      541 ttggcactct actctttcct taaaaaaccg tcaagaatgg ttatcaattt ttttaaactt
      601 attcaaaaca atattcttat acacatctca aacccgctga aataaagcaa agtggtggtc
      661 catagatggc aataccgatt tcaaagcagc ctgcactttg acaacacaca agatatacgg
      721 gaaggacagg gcatcagcat atatttcagc ccgaagccgt ttcattcgtt taaaaaactg
      781 cttttttcac aatttacctt tacaaagcct atacctatcc ttacaatttg ttttgctgtt
      841 tttggtatat ttttggggct
//
LOCUS       DAWKJW010000256          845 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.256, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000256 DAWKJW010000000
VERSION     DAWKJW010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.256"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            103..354
                     /locus_tag="WJJ54_001943"
     CDS             103..354
                     /locus_tag="WJJ54_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342754.1"
                     /translation="MDNTRIMAAREAGVKVEANVHNFNDRLSSKERIRFKHDGIEPQT
                     WGEAIQLRIRKQETQKGVPEGWSKRFPNGSIYDVKVLRK"
     gene            351..722
                     /locus_tag="WJJ54_001944"
     CDS             351..722
                     /locus_tag="WJJ54_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEZ7342755.1"
                     /translation="MIKQNSFVPYPEAMLPKGFKYPQSYLKLAQSTHAINYDEQYSFP
                     WWFENAESNISEVIDIYFEITGIPNLLPFARNQEWAACFDISDKSGNPKIIVVNLDNT
                     KYYETFENFDTWLKEAENDGW"
BASE COUNT          300 a          133 c          174 g          238 t
ORIGIN      
        1 aaattacaac tatgattcta ttgtagccga aatgaaagaa aaaaatcatg ggttggcgac
       61 agggttgatg ttgttaatat gcctgatgga gcacctacta gtatggataa cacgcgtatt
      121 atggcagcac gtgaagcagg agtaaaagtg gaagcgaatg ttcataattt taatgaccga
      181 ttatcatcaa aagagagaat caggtttaag catgatggta ttgagcctca aacttgggga
      241 gaagctatcc agctacgaat tagaaagcaa gaaacacaaa aaggagttcc agaagggtgg
      301 agcaaaagat ttcctaacgg aagtatttat gatgtaaagg tacttaggaa atgataaaac
      361 aaaatagttt tgttccgtat cctgaagcaa tgcttcctaa aggatttaaa tatccgcaaa
      421 gttatttaaa attagctcaa tccactcatg ccattaacta cgatgaacaa tattcttttc
      481 cttggtggtt tgaaaatgca gaaagcaata tatcagaagt aattgacatt tattttgaaa
      541 taactggcat tccaaaccta ttaccttttg ctagaaacca agagtgggct gcctgttttg
      601 atatttcaga taaatcaggt aatcctaaaa ttatagtagt taatttagat aatacaaaat
      661 attacgagac ttttgaaaat tttgatactt ggctaaaaga agctgaaaat gatggttggt
      721 agcagccgta ggtcggattc tcgaatccga cattttccaa cagcggcatt tcggaaacga
      781 tagacgcgtc aaatattttt gtcggataca agtatccgac catacggcaa tcatacgggt
      841 aactc
//
LOCUS       DAWKJW010000257          829 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.257, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000257 DAWKJW010000000
VERSION     DAWKJW010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 829)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 829)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.257"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
BASE COUNT          198 a          202 c          222 g          207 t
ORIGIN      
        1 ggcgaaccaa cgctgtactg gtttagattt aattcactat acctgcgtaa tggtatcggg
       61 tactcatcat caacctgcct tgcattcggt tgtgttgtcc ggcaactgtc cggttgtgtc
      121 gatgggttgc cctgccgctc cctgtgctgc gcaacggttg tgtgccttgg gtgggcgcgg
      181 gtggcggccg ggcggtttgt tgctatgata cgggagttcc gatatacaag ggtgggcttc
      241 agcccaccaa tcaacgaccg aaaaagaaaa aacgttgggc tgaagcccac tctacgcaat
      301 tacgcaactg ttatcgtggg gatgacggga ttttaggttt ttgtttttct gtttttgcgg
      361 gaaggatggg ttttaggttg cggtcattta tcggaaaagc agaaatcgct ccgccgtcat
      421 tcccgcgaaa gcgggaatct gaacacgtcc gtagggaaac ctatatcccg tcattcccac
      481 gaaagtggga atctagaacc tctgaatttt cagacaacct ttgaatattg ccgccgtccc
      541 gcgttctaga ttcccgcctg cgcgggaatg acgattcatc agtttcccga aacgcccgaa
      601 aaaccgaaac cgagcaaacc ggattcccgc ctgcgcggga atgacgattt ataagtttcc
      661 cgaaacgccc aaaaaaaccg aaatccgaca ggcaggattt ttgctttcgt ggggatgacg
      721 ggattttaag ttacggtcat ttatcggaaa agcagaaact gctccgccgt tattccagcg
      781 aaggcgggaa tctgaacacg tccgcacgga aacctatagt ggattaaca
//
LOCUS       DAWKJW010000258          795 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.258, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000258 DAWKJW010000000
VERSION     DAWKJW010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 795)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 795)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.258"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            63..692
                     /locus_tag="WJJ54_001945"
     CDS             63..692
                     /locus_tag="WJJ54_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HEZ7342756.1"
                     /translation="MSETENQALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIK
                     FLKLQSVFHKAVDHIYKDAELNKAIPELEYMARYDAVTQDLKDLGEEPYKFDKELPYE
                     TGNKAIGWLYCAEGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHL
                     NALGLSPEAEAEAIQGAREAFAFYKVVLRETFGLAADAEAPEGMMPHRH"
BASE COUNT          224 a          216 c          190 g          165 t
ORIGIN      
        1 tgcgggcaag tgcggatttt gcccgccccg catccttatc ccttaccgac aaaggaaaac
       61 ttatgagtga aaccgaaaat caagccctga cgtttgccaa acgtctgaag gcggatacca
      121 cggcggttca cgacagcgtg gataacctcg ttatgtctgt ccaaccgttt gtcagcaaag
      181 aaaactacat caaatttttg aaactccaat ccgttttcca caaggccgtc gaccacatct
      241 ataaagatgc cgaattaaac aaagccattc ccgagctgga atacatggcg cgatacgatg
      301 ccgtaacgca agacttgaaa gatttgggcg aagagcctta caaattcgac aaagaattgc
      361 catacgaaac tggcaacaaa gcaatcggct ggctttattg cgccgaagga tccaatttgg
      421 gcgcggcgtt tttgttcaaa cacgcccaaa aactcgatta caacggcgaa cacggcgcgc
      481 gccacctcgc tccgcatccc gacgggcgcg gcaaacactg gcgcgccttc gtcgagcatc
      541 tgaacgcatt gggcttaagc cccgaagccg aagccgaagc catccaaggc gcgcgcgaag
      601 cctttgcatt ctacaaagtc gtgttgcgcg aaaccttcgg cttggcagcc gatgccgaag
      661 caccggaagg aatgatgccg cacaggcact aaaaaataat cgaaccaaat aaacaaggtc
      721 tcggcatagc tgtttgcagg ggcctttatt tacacggcgc ggctttgttt acatggatta
      781 ctgtcttatt aaata
//
LOCUS       DAWKJW010000259          763 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.259, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000259 DAWKJW010000000
VERSION     DAWKJW010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.259"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(125..>763)
                     /locus_tag="WJJ54_001946"
     CDS             complement(125..>763)
                     /locus_tag="WJJ54_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEZ7342757.1"
                     /translation="QDDFRAWNGMTDNMLSIGQIVKVKPAGYAAPKTAAVESRPAVPA
                     AVQTPVKPAAQPPVQSAPQPAAPAAENKAVPAPAPQSPAASPSGTRSVGGIVWQRPTQ
                     GKVVADFGGNNKGVDIAGNAGQPILAAADGKVVYAGSGLRGYGNLVIIQHNSSFLTAY
                     GHNQKLLVGEGQQVKRGQQVALMGNTDASRTQLHFEVRQNGKPVNPNSYIAF"
BASE COUNT          163 a          216 c          210 g          174 t
ORIGIN      
        1 acacagtcaa acaaatttat atgccccgtc ccttctgaat gatttgaaaa cacagccgcc
       61 aaaaacaaaa atgccgtctg aaaacctttc agacggcatt tccaacttga tttcaggcag
      121 aaagtcagaa cgcgatatag ctgttcggat taaccggttt gccgttttgc cgcacctcga
      181 aatgaagctg cgttctggaa gcgtcggtat tgcccatcaa agcgacctgc tgcccgcgtt
      241 tgacctgctg gccttcgccg accagcaatt tttggttgtg cccgtacgcg gtcaggaagg
      301 aagaattatg ctggatgatg accaagtttc cgtatcccct caaacctgaa ccggcataaa
      361 ccactttgcc gtcagccgcc gccaaaatgg gttgtccggc atttcctgca atatcgacac
      421 ccttgttgtt gccgccgaaa tcggcaacca ctttaccttg cgtcggacgc tgccaaacaa
      481 tgccgccgac cgaacgcgtg ccggaaggcg aagcggcagg agattgcggg gcgggcgcgg
      541 gaaccgcttt attttccgca gcgggcgcgg caggttgcgg cgcggactgc acgggcggtt
      601 gcgcggcggg tttcacaggg gtttgcacgg cggccggtac ggcgggcctg ctttctacgg
      661 ctgcggtttt cggtgcggca tatcctgccg gtttgacttt aacaatctga ccgatgctca
      721 acatattgtc ggtcatgccg ttccacgcac ggaaatcgtc ttg
//
LOCUS       DAWKJW010000260          748 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.260, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000260 DAWKJW010000000
VERSION     DAWKJW010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 748)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.260"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(12..398)
                     /locus_tag="WJJ54_001947"
     CDS             complement(12..398)
                     /locus_tag="WJJ54_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEZ7342758.1"
                     /translation="MRKILLDTHALLWWLLDDKELGISARKLIENPRNAIFVSAASIW
                     EISIKQNKGLLKLPEEFFDVLQEEDFEMLPIGLFHAKQAGSLPEIHKDPFDRMLIAQT
                     QAEGFELMTVDEYIPQYGIRVVNASS"
     gene            complement(395..643)
                     /locus_tag="WJJ54_001948"
     CDS             complement(395..643)
                     /locus_tag="WJJ54_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEZ7342759.1"
                     /translation="MFQANIHQAKTNLSQLIQRAEAGEIVIIAKAGKPCVQLTGIEKP
                     ARNAGRLKKFSHMENTDISRILEDDNETAALFFEESAL"
BASE COUNT          204 a          181 c          116 g          247 t
ORIGIN      
        1 ttttgtattt gtcagcttga tgcgttgaca actctaattc catactgcgg aatatattca
       61 tcgacagtca tcagttcaaa gccttccgct tgggtttgtg caatcaacat cctatcgaaa
      121 gggtctttgt gtatctccgg aaggcttcca gcctgttttg catgaaacag acctataggc
      181 aacatttcaa aatcctcttc ttgaagcaca tcaaaaaact cttccggtaa tttcaacaac
      241 cccttgttct gcttgatgga aatttcccaa atactcgctg cactgacaaa gatcgcattt
      301 ctcggatttt ctatcagttt gcgtgcagat atccccagtt ccttgtcatc caacaaccac
      361 cacagcaaag catgggtatc aagcagaatc tttctcacag agccgactcc tcaaaaaata
      421 aagctgccgt ttcattgtca tcctcaagaa tacgtgaaat atccgtattt tccatatgac
      481 tgaatttttt caaccttcct gcatttcgtg ccggtttttc aataccggtt agttggacgc
      541 aaggcttacc tgccttcgca ataataacaa tttcccctgc ttctgctctt tgaatcaatt
      601 gactcaaatt ggtttttgcc tgatgaatat ttgcttgaaa cataacactt ctcatgatta
      661 gctaacttaa ctaatataca tcattaccaa gattttggga atctcattac atatatttga
      721 ttatatccgc cgttttattc acaccttg
//
LOCUS       DAWKJW010000261          694 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.261, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000261 DAWKJW010000000
VERSION     DAWKJW010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.261"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            233..532
                     /locus_tag="WJJ54_001949"
     CDS             233..532
                     /locus_tag="WJJ54_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEZ7342760.1"
                     /translation="MQRCFNWFDHYCRRLEKYFRRCSIMETWVQNYTAIGGSLYLTAA
                     AALLPIVFFFAALTVLKLKGYQAGLYTLLIALAVAVFGFGMPASMAVSSLPPQPH"
     gene            511..694
                     /locus_tag="WJJ54_001950"
                     /pseudo
     CDS             511..694
                     /locus_tag="WJJ54_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003757319.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
BASE COUNT          183 a          199 c          145 g          167 t
ORIGIN      
        1 atcaaacatc aaattggact gaccaatcag ggcggattct aatgacacgc cgttcccgcc
       61 gtcaacggca tttacctcgc accgcccccg aaacacaaga aaaaactaca ccaaactaca
      121 atttttgttc atgcaaatat ttgttttgac aggatttaaa cgaaagctcc gattcaaatc
      181 tgccgaaccg cccaaaaata tattgaccta aatattaaag tttcgcaaag taatgcaacg
      241 ttgctttaat tggtttgacc actattgccg acgattagaa aaatattttc ggagatgttc
      301 aattatggaa acttgggttc aaaactacac ggcaatcggc ggcagcctgt atctgactgc
      361 cgccgccgca ctcttaccca tcgtcttttt ctttgccgcg ctgaccgtcc tgaagctgaa
      421 aggctatcag gcggggcttt atacgctgct gattgcgctt gccgttgccg tattcggctt
      481 cgggatgccg gcgagtatgg cggtttcttc cctgccgccg cagccgcact gacccaacgc
      541 ccctacgcca cgctggattt gaccgcgcat tacaaaatcg gaaaatccac acgcatcggt
      601 ttggactttg aaaacgtgtt caacaaacgc taccgcacca tgcccgacat tcacgtttac
      661 ggcacgccgc gcagcctgac cgcaaccgtc aaac
//
LOCUS       DAWKJW010000262          681 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.262, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000262 DAWKJW010000000
VERSION     DAWKJW010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 681)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.262"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(80..565)
                     /gene="fxsA"
                     /locus_tag="WJJ54_001951"
     CDS             complement(80..565)
                     /gene="fxsA"
                     /locus_tag="WJJ54_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HEZ7342761.1"
                     /translation="MRFFGIGFLVLLFLEIMSIVWVADWLGGGWTLFLMAATFAAGVL
                     MLRHTGLSGLLLAGAAMRSGGRVSVYQMLWPIRYTVAAVCLMSPGFVSSVLAVLLLLP
                     FKGGAVLQAGGAENFFNMNQSGRKEGFSRDDDIIEGEYTVEEPYGGNRSRNAIEHKKD
                     E"
BASE COUNT          197 a          213 c          126 g          145 t
ORIGIN      
        1 gtactggttt ttgttaatcc actatatttt caaaccggaa aaatgccgtc tgaaccttca
       61 gacggcattc cattcacatt tattcgtctt ttttgtgttc gatggcgttt cgggaacgat
      121 tgccgccgta aggctcttca accgtatatt ccccctcgat aatatcgtca tcgcgggaaa
      181 agccctcttt tctgcccgat tggttcatgt tgaaaaaatt ttccgcacct cctgcctgca
      241 acactgcacc tcccttaaac ggcagcagca gcaataccgc caacaccgag gatacgaatc
      301 ccggactcat cagacacacc gccgccaccg tataacggat aggccacaac atctgataaa
      361 cggataccct cccgccgctt ctcattgccg cgcccgccaa taaaagaccg gacagccccg
      421 tatgcctgag catcagcacg ccggcggcaa aggttgccgc cattagaaac agcgtccaac
      481 cgccgcccaa ccaatcggca acccacacaa tcgacataat ctccaaaaac agcagcacca
      541 aaaaaccgat accgaaaaat ctcattgacc gtcatcctta tatttaagta aacagcaaac
      601 cgcccgaaca ggactccaag cgagctgcct gtaaatgatt acaaaaccat gtgcttcaag
      661 ccgaaacaat gtgaaatcac g
//
LOCUS       DAWKJW010000263          629 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.263, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000263 DAWKJW010000000
VERSION     DAWKJW010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.263"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            12..392
                     /locus_tag="WJJ54_001952"
     CDS             12..392
                     /locus_tag="WJJ54_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mAFB alternative"
                     /protein_id="HEZ7342762.1"
                     /translation="MHTLDGEMAGGNRPPKSITSNSKADASTQPSLQAQLIGEQISSG
                     HAYNKHVIRQQEFTDLNINSPADFARHIENIVSHPTNMKELPRGRTAYWDDKTGTIVI
                     RDKNSDDGGTAFRPTSGKKYYDDL"
     gene            402..608
                     /locus_tag="WJJ54_001953"
     CDS             402..608
                     /locus_tag="WJJ54_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342763.1"
                     /translation="MNILSINNQNSTISLTQDEVFVLRAILNEIYAGVCVDSREFENV
                     SGVRKHEVDNLQQQFAGIYKKMTT"
BASE COUNT          235 a          104 c          120 g          170 t
ORIGIN      
        1 ctgttcgcac catgcatact ttggatgggg aaatggccgg tgggaataga ccgcctaaat
       61 ctataacgtc caacagcaaa gcagatgctt ccacacaacc gtctttacaa gcgcaactaa
      121 ttggagaaca aattagtagt gggcatgctt ataacaagca tgtcataaga caacaagaat
      181 ttacggattt aaatatcaat tcaccagcag attttgctcg gcatattgaa aatattgtta
      241 gccatccaac aaatatgaaa gagttacctc gcggtagaac tgcgtattgg gatgataaaa
      301 cagggacaat agttatccga gataaaaatt ctgacgatgg aggtacagca tttagaccaa
      361 catcaggtaa aaaatattat gatgatttat aggaaaaagc catgaatata ctatccataa
      421 ataatcaaaa ctcaactatt tcactaactc aagatgaagt ttttgtttta cgagctatct
      481 tgaatgagat atatgcgggc gtatgtgtag attcaagaga atttgaaaat gtatctggtg
      541 ttagaaaaca tgaagtagat aatttacaac aacagtttgc tggaatttat aaaaaaatga
      601 caacttaaca acccaaattt ttgtcagag
//
LOCUS       DAWKJW010000264          628 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.264, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000264 DAWKJW010000000
VERSION     DAWKJW010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.264"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(464..>628)
                     /locus_tag="WJJ54_001954"
     CDS             complement(464..>628)
                     /locus_tag="WJJ54_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ7342764.1"
                     /translation="EAAGIAKRQTASKYLKELSDIGVLQEIVIGRDKLFIHPRLMELL
                     RGEGNSFTSF"
BASE COUNT          164 a          124 c          139 g          201 t
ORIGIN      
        1 taggtttcca tgcggacgcg ttcggattca cgactgcgcg gaaatgacgg gattttggtg
       61 tattccctaa aaaaataaaa aaacatttgc aactttgtta aaaataaagg ctgtgtttta
      121 acgatgtgtt gatatttaat tttagaaagg tagctattta atagttacct tttcttattt
      181 aaaaatagct ttctcaaatt ccatgaacgc ctcaatacga tatgcagatg ctctatcgaa
      241 attaagtttc aacattttgt ttattaaaca ttttatttta gccatttttc aatatacccc
      301 caaatatacc cccaatttgc acaagtcaaa attttaggca ggggttttgt tgctcccatg
      361 atacgcgggc ggatgccggc ttttcgcggg ggaaatacaa ggggtctcgg ttcgggtgtc
      421 aaaatccctg tttcgtgtta gtcatgtggg ggggaagagg gggttagaat gaagtaaagc
      481 tgttgccctc tccccgcaat agttccatta ggcgcggatg aatgaatagt ttgtccctgc
      541 cgatgacgat ttcttgcagc acacctatgt ctgaaagctc tttcaggtac ttagaggccg
      601 tctgccgttt ggctatccct gccgcttc
//
LOCUS       DAWKJW010000265          612 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.265, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000265 DAWKJW010000000
VERSION     DAWKJW010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.265"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..486)
                     /locus_tag="WJJ54_001955"
     CDS             complement(<1..486)
                     /locus_tag="WJJ54_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ7342765.1"
                     /translation="MKYRRFYRNGGTYFFTVVTNKRQKILTDDAVRLALRQAVMAVRE
                     RYPFEILAWVLMPDHLHTIWRLPDNDSAYSERWRQIKRHSQYLIGGNLRLWQKRFWEY
                     TIRDEADFACHFDYLHFNPVKHGYVGQISDWGFSTFHRYVKQGIYPHNWGGGNADFSI
                     EY"
BASE COUNT          174 a          144 c          136 g          158 t
ORIGIN      
        1 gtattcaata gaaaagtccg cattgccgcc accccaatta tgcggataaa taccctgttt
       61 gacataacgg tgaaacgtag aaaaccccca atcggaaatt tgtcctacat agccatgttt
      121 gaccggattg aaatgcagat aatcaaaatg gcaggcaaaa tcggcctcat cgcggatagt
      181 atattcccaa aagcgttttt gccaaagcct gagattgccg ccgattaaat attggctgtg
      241 ccgcttgatt tgccgccagc gttccgaata agcagaatca ttgtccggca gccgccatat
      301 ggtatgcaga tggtcgggca tcaacaccca tgccaaaatt tcaaacggat accgttcgcg
      361 caccgccatt accgcctgcc gtaaagccaa acgcaccgca tcatcggtca aaatcttctg
      421 ccgtttattg gttacaaccg taaaaaagta agtgccgcca ttgcggtaaa aacgacggta
      481 tttcatagta ttatgctcgg aatgattttg taggtcggat tcttgaattc gacattttgg
      541 gcattgctgc aatggattgc aatgatggga atgttaaagg ttttgtcgga tacaagtatc
      601 cgacctacgc tt
//
LOCUS       DAWKJW010000266          590 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.266, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000266 DAWKJW010000000
VERSION     DAWKJW010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.266"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            463..>590
                     /gene="pilE"
                     /locus_tag="WJJ54_001956"
     CDS             463..>590
                     /gene="pilE"
                     /locus_tag="WJJ54_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial major subunit PilE"
                     /protein_id="HEZ7342766.1"
                     /translation="MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEA"
BASE COUNT          217 a          156 c           83 g          134 t
ORIGIN      
        1 ggacacagga acaccacgcg ccgatttcaa acactttcca agaaaacgga aatttttaaa
       61 aattaaattt aaaatttccc acccaaccca ccctatgcta ccgcgcaaat tcaaaaatct
      121 caaattccga cccaatcaac acacccgatg ccccatgcca atagaaatac cccacaccaa
      181 taaaaaagtg ccgaaaatcg gcactaaaac tgacaatttt caacactgct gacaaaaaac
      241 ggcaaccccc taattactca aaccacgcca aacgaaagaa aatgtaaaat aaaaacaatc
      301 atataaagat aaacgcataa attttcacct caaaatacaa acttggtacc aatcttgctt
      361 tataatacac aggtatcgca acaaaatacc gatggtcaaa tacattgcat aatgccgatg
      421 gcgtaagctt gaagcatttc ctttccaatt aggagtaatt ttatgaacac ccttcaaaaa
      481 ggttttaccc ttatcgagct gatgattgtg attgccatcg tcggcatttt ggcggcagtc
      541 gcccttcctg cttatcaaga ctacacagcc cgcgcgcaag tttccgaagc
//
LOCUS       DAWKJW010000267          583 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.267, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000267 DAWKJW010000000
VERSION     DAWKJW010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.267"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(1..111)
                     /locus_tag="WJJ54_001957"
                     /pseudo
     CDS             complement(1..111)
                     /locus_tag="WJJ54_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237266.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
     gene            384..>583
                     /locus_tag="WJJ54_001958"
     CDS             384..>583
                     /locus_tag="WJJ54_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7342767.1"
                     /translation="MFDGAKVVRRMEGNLWVFGMVALEKTCFKGQMPSENRFQTAFSV
                     YLKQTGKGSNILQSSYSHKRFIV"
BASE COUNT          155 a           97 c          165 g          166 t
ORIGIN      
        1 gtcggtgctt ttttgtttgg aagggaaatg gctaaaatat gtagcattat gttctgtatc
       61 gttgtttacc gcttccgcac ctttgtccgc cttaaagcag gtaaacactg caatgaatcg
      121 acgcaaagaa aatgtcgtct gaacatgtgt tcgggcggcg ttttgttggg gggtatcgga
      181 gtggaacgtc tgaaaaaggg tttcaggcag tctttgggcg tgtggtgaca gtcgaaaacg
      241 tgataaggct acctgaaaag tttgggagat tttcagatag cctttggtat tgggcgcaac
      301 agacgcaggt acagattagg cggtgtgccg taatcgtacg aatgccgatt caacctaagc
      361 agacatcagt atttaggaag tggatgtttg atggagcaaa ggttgtacga aggatggaag
      421 gcaacctgtg ggtgtttggt atggtcgcgc ttgaaaaaac gtgttttaag ggacaaatgc
      481 cgtctgaaaa tcggtttcag acggcatttt ctgtttattt aaagcaaaca ggaaaaggca
      541 gcaatattct gcagtcttcc tattcacaca agcgttttat agt
//
LOCUS       DAWKJW010000268          580 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.268, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000268 DAWKJW010000000
VERSION     DAWKJW010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 580)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.268"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            166..522
                     /locus_tag="WJJ54_001959"
     CDS             166..522
                     /locus_tag="WJJ54_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ7342768.1"
                     /translation="MTGFNDAAGVASSSDIKGKYVEKVEVANGVITAQMASSNVNKEI
                     KGRKLSLWAKRQDGSVKWFCGQPVTRDANATNDAVKADTGTAKKIDTKHLPSTCRDDS
                     STGCIETPPTAFYKNT"
BASE COUNT          167 a          155 c          134 g          124 t
ORIGIN      
        1 cgaaagtggg aatctagttc gttgagtttc agttatttag aataaatttt gaaactttaa
       61 tcccatcatt cccacgcagg cgggaatcta ggtctgtcgg cacggaaact tatcgggtaa
      121 aaaggtttct ccggtcctga gttctagatt cccgcttttg cgggaatgac gggatttaat
      181 gatgccgccg gcgtggcatc ctcctccgac atcaaaggca aatatgttga gaaagttgaa
      241 gtcgcaaacg gcgtcattac cgcccaaatg gcttcaagca acgtaaacaa agaaatcaaa
      301 ggcagaaaac tctccctgtg ggccaagcgt caagacggtt cggtaaaatg gttctgcgga
      361 cagccggtta cgcgcgacgc caacgccacc aacgacgccg tcaaagccga caccggcacc
      421 gccaagaaga tcgacaccaa gcacctgccg tcaacctgcc gcgatgattc atctaccggt
      481 tgcatagaaa caccacctac ggctttctat aaaaatacct aaaccgtcat tcccacgaaa
      541 gtgggaatcc agattcccga taagtttccg taccgacaga
//
LOCUS       DAWKJW010000269          571 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.269, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000269 DAWKJW010000000
VERSION     DAWKJW010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.269"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
BASE COUNT          150 a          131 c          114 g          176 t
ORIGIN      
        1 tttgcaagat tttagtttaa tcatcaaaca gggaacagca aaaatccccg ctgcaacggg
       61 gatttttgtt cggctctcgc ctgtgtgatt aacttcacta ggagaagcta aaatgcttaa
      121 attccttatg cgtgggaaaa agttgctgct gtccgttgaa gtgaaccaca agttcatttt
      181 agcggttgct ttgctgttaa gtcaatgcag tagctaaccc gaccacaatc aaaaaaacgc
      241 aagttttccg cctactctgt gagtgggcgg ttttttctta tttcaaatct gtgacacaat
      301 atctgtcgcc tttcttgcca taattgcact gtgtctcaat gactttaacg cacgttcgct
      361 tatcgcaacg gctggttgta gcgcccattc tcatttcgca gtgctacaat ggacggcggt
      421 tctaaaatat gaaaactcaa gttgtagctc ccattctcat ttcgcagtgc tacaataaac
      481 tcaacgcatc taacatagtt cacactgttg tagctcccat tctcatttcg cagtgctaca
      541 atggtcagat tataataacg ttgagcgcgt g
//
LOCUS       DAWKJW010000270          567 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.270, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000270 DAWKJW010000000
VERSION     DAWKJW010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.270"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
BASE COUNT          106 a          171 c          162 g          128 t
ORIGIN      
        1 ctttttaaag ttttattcat cgtatttcct tttcggtcaa accccccgcc cttcgggcat
       61 ccgtccttcg gggcggcagg atcaggcttt gtccgggagg ggtgcaagcc cttccgaatc
      121 agggcggcgc cttatgtgcc gccctgcgtg ttggaacata ttttatccct taaatcttgc
      181 ttcgcgggat accgtcggcg gcaggcgcgc cgcaaacggc gggattcggc aaaccgcccg
      241 attccgcgcc cgccgaattg ctggttggaa aacccctttg gcccggctgc caaaggggga
      301 tgttcggaaa agtaacacgc ccctttggcc ggatgcaatg tatagggtta ccgcattatt
      361 ctacccttgc gcgctgatca tggtaaagcg gttttcggca atccgcaacc gcctccttgg
      421 cccgccattg ccgcgaaagc gggaatccgg aacgtaaaat ctcaaaaaaa ccgttttatc
      481 cggcaagttt gcccgccggc aggcccgcca ttgccgcctg cgcggcaatg gcgggccggg
      541 gaggcggcat tttccaagtt gcggcaa
//
LOCUS       DAWKJW010000271          518 bp    DNA     linear   BCT 19-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M29034_Neisseria
            meningitidis SAMN10276006-rid8982503.denovo.272, whole genome
            shotgun sequence.
ACCESSION   DAWKJW010000271 DAWKJW010000000
VERSION     DAWKJW010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10276006
            Sequence Read Archive: SRR8200464
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 518)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676440.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676440.1
            Genome Coverage       :: 194x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/19/2022 00:23:37
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,960
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,840
            CDSs (with protein)               :: 1,840
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 33 of 70
            Pseudo Genes (incomplete)         :: 36 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10276006-rid8982503.denovo.272"
                     /isolate="M29034_Neisseria meningitidis"
                     /isolation_source="eye"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2014"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..381
                     /locus_tag="WJJ54_001960"
     CDS             <1..381
                     /locus_tag="WJJ54_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ7342769.1"
                     /translation="DLERLAARDIIRFPGFVNNVSEVIKAHHIFVLPSYREGVPRSTQ
                     EAMAVGRAVITTDVPGCRETVADKVNGFLIEPWNPRILAEKMIYFIENREAVRLMGNA
                     SYAIAKDKFDAEKVDLKLLDILKA"
BASE COUNT          127 a          125 c          130 g          136 t
ORIGIN      
        1 gatttggaac ggcttgccgc ccgcgatatt atccgtttcc ccggttttgt gaacaatgtt
       61 tccgaagtga taaaggcgca tcatatattc gtattgccgt cttataggga aggcgttccc
      121 cgaagcactc aggaggcaat ggccgtcggc agggcagtga ttacgacgga tgtccccgga
      181 tgcagggaaa cggtcgccga caaggtcaac ggcttcctga tcgaaccttg gaatccccgc
      241 atcttggccg aaaaaatgat ttattttatc gaaaacaggg aagccgtccg cctgatgggg
      301 aatgcaagtt atgcgattgc caaagataaa ttcgatgccg aaaaagtcga tttgaaattg
      361 ctcgatattt tgaaggcgta aacaaggctg cccgcttttg agtttcggtc atttctgata
      421 aacctccgtc attcccgcca cacccccgtc attccctcga aagcgggaat tcaggttcgt
      481 tgagtttcgg tcatttccga taaattcttg caactttg
//
